Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0008783

Physical Location & Seq

Genomic Coordinates Reverse (-)

998543 .. 1000702

Gene Structure 2160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g01620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGCAAGCTTTAATCACTTGGGAAGTACCCCAGGTAGGATTTGGACTTGGTTCTTCTTGTAAATTTAGAACTAGAAGTAGGAGGAAAAAGATTGGAGTTGTTGGTTTTCCTGTTTGTAATGGTGGAAATGGTGATGTTTTACTTGGGAGTGAGGGTTTCAATGGAAGCCGAAAATTTGGTTTCGGATGTGGGTGCTTCTATGGGCACTCTAGACTTAAACTTGCTCGGTTTTGTGAGCCGAAGAAGGGTTCGTTTGTGGTAGCATGGGCATTGGAGGAGCAAGCAATTGGGAATGAGGTTCTTGTGGAGGAAGAGACATCGGAAAATAGGTTGTCGGGTGAATGCGAGGGTGAGGGTGTTGTTGATCATCGAAATGTGGATGGAAGGAAGGGCTGTGATGGTAATGATGATGATGAAATAGGTATAGGAGGTCAAGGAGAGAATTGGGAACAGAGAAATGAAAAGATTGACGTGCGTGCGCTGGCGCTAAGCTTACAGTTTGCGAAAACAGCTGATGATGTTGAAGAGGTTCTTAAGGACACGGGTGATTTGCCCCTCCAAGTATTCTCATCCATTATCAGGGGTTTCGGAAGAGACAGATTGATGGATTCCGCTTTTGCTACTGTCGAGTGGCTTAAGAGAAAGAAGGAAGAAACTAATGGTTTCATTACCCCAAACTTATTCATATATAACAGTCTTTTGGGTGCAGTGAAGCAATCTGGACAATTCGGAGAAATTGACAAAGTATTGAGCGATATGACTAGGGAAGGGGTGGTACCGAATGTTGTAACTTACAACACTAAAATGGCTATTTACATTGAACGGGGACAAGGTATGGAGGCCCTTCATGTCCTTGAGGAGATTCAAGAGAAGGGCCTGATTCCGTCTTCAGTATCGTACTCCACAGCATTGTTGGCTTATCAACGAATGCAAGATGGGAATGGAGCTTTAAAGTTCTTTGTTGAGTTTAGAGAAAATTATCGTAAAGGTCATATAGGTAAAGATGCTGATGTAGACTGGGAAGAGGAGTTTGTGAAGCTTGAGAACTTTACAAAACGCGTTTGCTACCAAGTGATGCGAAGGTGGCTTGTGAGGGATGATAACTTAACCACCAATGTGCTCAAACTGCTAACAGAGATGGATATTGCTGGGGTTCCACTTGGGAGGGCAGAGCACGAGCGCCTTTTGTGGGCTTGCACCCGCGAAGAACATTATATTGTAGCAAAAGATTTGTATAGTAGGATAAGAGAAAAGCATTCTGACATAAGTTTAGCCGTGTGTAACCATACGATTTGGTTGATGGGGAAGGCTAAGAAATGGTGGGCAGCTTTGGAGATTTATGAGGATATGTTGGACAAGGGGCCGCAGCCAAATAACATGTCGTATGAATTGATAGTATCTCACTTTAATGTCCTTCTAAGTGCAGCTAGAAAAAGAGCGATTTGGAAATGGGGTGTCAGGTTGCTCAACAAGATGGAAGAGAAAGGGCTTAAACCAAGAAGTAAGGAATGGAATGCGGTTCTTGTTGCCTGTTCCAAGGCTGCTGAAACCTCTGCGGCTGTCAAAATTTTTAAGAGAATGGTGGAGCAAGGCCAGAAACCCACAATCCTTTCTTACGGGGCATTGCTTAGTGCCCTCGAGAAGGGTAAGCGCTATGATGAGGCCCGTCAGGTGTGGGAACATATGCTTAAGGTTGGTCTGAAGCCAAACTTGTATGCCTACACAACTATGGCTTCGATTTTCAGTGGCCATGGAAAACCTAACATGGTAGAAACCATCATTGATGACATGGTTTCAGCAGGCATTGAGCCAACTGTTGTCACATACAATGCCATTATCAGTGGGTTTGCAAGAAACGGTTTTAGCAGTGCTGCATACGATTGGTTTGACCGCATGAAAGCTCAGAACATCCCTCCAAACCATGTCACATACGAAATGATGATTGAGGCTCTCGCAAAGGAAGGGAAGCCAAGGCTTGCATATGAGCTATATTTGAGAGCTCGAACTCAACGCCTTGCCCTCTCTTCAAAAGCTTATGACACAGTGGTTCGGTCCTCACTGGAATCCAGAGCTAACATTGATGTAAGACTTTTAGGGGAACGGCCACCAGAGAGAAAGGTGAACGGGCAAGGTAGGAACACTTCCAGCCAAGTTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

720

Amino Acids

81.02

Weight (kDa)

8.28

Isoelectric Point (pI)

32.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	223 - 272	6.7e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	225 - 267	7.7e-09	PPR repeat family
PPR_3	PF13812	248 - 307	1.4e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	260 - 304	1.4e-08	PPR repeat family
PPR_long	PF17177	394 - 545	3.3e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	487 - 546	6.8e-09	Pentatricopeptide repeat domain
PPR_long	PF17177	508 - 680	7.7e-15	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	534 - 578	9.5e-08	PPR repeat family
PPR_2	PF13041	581 - 618	3.9e-06	PPR repeat family
PPR_3	PF13812	593 - 651	1.4e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	601 - 633	1.3e-07	PPR repeat
PPR_2	PF13041	604 - 653	1.5e-14	PPR repeat family
PPR	PF01535	607 - 636	9.6e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46610 AT3G46610
fragaria_vesca	FvH4_7g06820 FvH4_7g06820 FvH4_7g06820
malus_domestica	MD09G1019500.v1.1 MD17G1020100.v1.1
prunus_persica	Prupe.2G095300_v2.0.a1 Prupe.2G095300_v2.0.a1
pyrus_communis	pycom111g01620
rosa_chinensis	RchiOBHm_Chr1g0336521
rosa_laevigata	RLG00000029357
rosa_multiflora	Rmu_sc0001981.1_g000003 Rmu_sc0005044.1_g000026 Rmu_sc0009324.1_g000001
rosa_roxburghii	Rroxscaffold_4G00315530
rosa_rugosa	Rorug01G0125900
rosa_samantha	Rh1AG147000 Rh1BG115100 Rh1CG138300 Rh1DG153700
rosa_wichuraiana	Rw1G009520 Rw1G011910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	775
AccB1I	GGYRCC	1 cut(s)	775
AccI	GTMKAC	1 cut(s)	1014
AccII	CGCG	2 cut(s)	1059, 1203
AciI	CCGC	6 cut(s)	612, 1201, 1364, 1517, 1556, 1891
AcoI	YGGCCR	2 cut(s)	1747, 2102
AcsI	RAATTY	3 cut(s)	62, 173, 1566
AcuI	CTGAAG	2 cut(s)	873, 1721
AfaI	GTAC	3 cut(s)	27, 777, 899
AfeI	AGCGCT	1 cut(s)	1652
AfiI	CCNNNNNNNGG	5 cut(s)	35, 245, 579, 1189, 1642
AflII	CTTAAG	3 cut(s)	533, 635, 1688
AflIII	ACRYGT	2 cut(s)	1057, 1377
AgsI	TTSAA	5 cut(s)	160, 524, 821, 866, 2028
AjiI	CACGTC	1 cut(s)	472
AjnI	CCWGG	1 cut(s)	30
AleI	CACNNNNGTG	1 cut(s)	1115
Alw21I	GWGCWC	3 cut(s)	1122, 1176, 2002
Alw26I	GTCTC	2 cut(s)	308, 588
Ama87I	CYCGRG	1 cut(s)	1637
Aor51HI	AGCGCT	1 cut(s)	1652
AoxI	GGCC	7 cut(s)	840, 874, 1361, 1591, 1662, 1747, 2102
ApeKI	GCWGC	5 cut(s)	1325, 1366, 1424, 1541, 1871
ApoI	RAATTY	3 cut(s)	62, 173, 1566
ArsI	GACNNNNNNTTYG	2 cut(s)	1364, 1396
Asp700I	GAANNNNTTC	1 cut(s)	528
Asp718I	GGTACC	1 cut(s)	775
AspLEI	GCGC	4 cut(s)	481, 487, 1182, 1653
AspS9I	GGNCC	5 cut(s)	841, 874, 1361, 1663, 2052
AsuHPI	GGTGA	5 cut(s)	143, 350, 362, 557, 2131
AvaI	CYCGRG	1 cut(s)	1637
AvaII	GGWCC	1 cut(s)	2052
BaeGI	GKGCMC	2 cut(s)	207, 1636
BalI	TGGCCA	1 cut(s)	1749
BanI	GGYRCC	1 cut(s)	775
BanII	GRGCYC	1 cut(s)	2002
BarI	GAAGNNNNNNTAC	4 cut(s)	759, 791, 2125, 2157
BauI	CACGAG	1 cut(s)	1175
BbsI	GAAGAC	1 cut(s)	879
Bbv12I	GWGCWC	3 cut(s)	1122, 1176, 2002
BbvI	GCAGC	5 cut(s)	1337, 1378, 1436, 1528, 1858
BccI	CCATC	8 cut(s)	374, 392, 598, 929, 1132, 1294, 1468, 1784
BceAI	ACGGC	2 cut(s)	1259, 2117
BciT130I	CCWGG	1 cut(s)	32
BclI	TGATCA	1 cut(s)	364
BcoDI	GTCTC	2 cut(s)	308, 588
BfaI	CTAG	4 cut(s)	72, 210, 762, 1428
BfoI	RGCGCY	3 cut(s)	488, 1183, 1654
BfrI	CTTAAG	3 cut(s)	533, 635, 1688
BisI	GCNGC	7 cut(s)	1326, 1364, 1367, 1425, 1542, 1557, 1872
BlpI	GCTNAGC	1 cut(s)	488
BlsI	GCNGC	7 cut(s)	1327, 1365, 1368, 1426, 1543, 1558, 1873
Bme1390I	CCNGG	1 cut(s)	32
Bme18I	GGWCC	1 cut(s)	2052
BmeT110I	CYCGRG	1 cut(s)	1637
BmgBI	CACGTC	1 cut(s)	472
BmgT120I	GGNCC	5 cut(s)	841, 874, 1361, 1663, 2052
BmiI	GGNNCC	3 cut(s)	777, 1155, 1362
BmrFI	CCNGG	1 cut(s)	32
BmrI	ACTGGG	1 cut(s)	1027
BmsI	GCATC	2 cut(s)	994, 1065
BmuI	ACTGGG	1 cut(s)	1027
BpiI	GAAGAC	1 cut(s)	879
Bpu1102I	GCTNAGC	1 cut(s)	488
BpuEI	CTTGAG	2 cut(s)	875, 1061
BsaJI	CCNNGG	4 cut(s)	30, 1536, 1750, 1970
BsaXI	ACNNNNNCTCC	2 cut(s)	139, 169
Bsc4I	CCNNNNNNNGG	5 cut(s)	35, 245, 579, 1189, 1642
Bse1I	ACTGG	2 cut(s)	1022, 2064
Bse3DI	GCAATG	1 cut(s)	1622
BseBI	CCWGG	1 cut(s)	32
BseDI	CCNNGG	4 cut(s)	30, 1536, 1750, 1970
BseGI	GGATG	5 cut(s)	191, 385, 569, 1102, 1908
BseLI	CCNNNNNNNGG	5 cut(s)	35, 245, 579, 1189, 1642
BseMI	GCAATG	1 cut(s)	1622
BseMII	CTCAG	1 cut(s)	1916
BseNI	ACTGG	2 cut(s)	1022, 2064
BseRI	GAGGAG	3 cut(s)	290, 872, 1040
BseSI	GKGCMC	2 cut(s)	207, 1636
BseXI	GCAGC	5 cut(s)	1337, 1378, 1436, 1528, 1858
BseYI	CCCAGC	1 cut(s)	1148
BsgI	GTGCAG	2 cut(s)	726, 1443
Bsh1236I	CGCG	2 cut(s)	1059, 1203
BshFI	GGCC	7 cut(s)	842, 876, 1363, 1593, 1664, 1749, 2104
BshNI	GGYRCC	1 cut(s)	775
BsiHKAI	GWGCWC	3 cut(s)	1122, 1176, 2002
BsiHKCI	CYCGRG	1 cut(s)	1637
BslFI	GGGAC	1 cut(s)	840
BslI	CCNNNNNNNGG	5 cut(s)	35, 245, 579, 1189, 1642
BsmAI	GTCTC	2 cut(s)	308, 588
BsmFI	GGGAC	1 cut(s)	840
BsmI	GAATGC	4 cut(s)	347, 933, 1255, 1519
BsnI	GGCC	7 cut(s)	842, 876, 1363, 1593, 1664, 1749, 2104
BsoBI	CYCGRG	1 cut(s)	1637
Bsp1286I	GDGCHC	5 cut(s)	207, 1122, 1176, 1636, 2002
Bsp143I	GATC	1 cut(s)	364
Bsp1720I	GCTNAGC	1 cut(s)	488
Bsp19I	CCATGG	1 cut(s)	1750
BspACI	CCGC	6 cut(s)	612, 1201, 1364, 1517, 1556, 1891
BspANI	GGCC	7 cut(s)	842, 876, 1363, 1593, 1664, 1749, 2104
BspCNI	CTCAG	1 cut(s)	1915
BspFNI	CGCG	2 cut(s)	1059, 1203
BspLI	GGNNCC	3 cut(s)	777, 1155, 1362
BspT107I	GGYRCC	1 cut(s)	775
BspTI	CTTAAG	3 cut(s)	533, 635, 1688
BsrDI	GCAATG	1 cut(s)	1622
BsrI	ACTGG	2 cut(s)	1022, 2064
BssECI	CCNNGG	4 cut(s)	30, 1536, 1750, 1970
BssMI	GATC	1 cut(s)	364
BssSI	CACGAG	1 cut(s)	1175
BssT1I	CCWWGG	3 cut(s)	1536, 1750, 1970
Bst2BI	CACGAG	1 cut(s)	1175
Bst2UI	CCWGG	1 cut(s)	32
Bst4CI	ACNGT	6 cut(s)	498, 625, 695, 1816, 1859, 2044
Bst6I	CTCTTC	6 cut(s)	306, 519, 586, 1017, 1473, 2029
BstAFI	CTTAAG	3 cut(s)	533, 635, 1688
BstC8I	GCNNGC	7 cut(s)	6, 282, 477, 483, 1195, 1801, 1977
BstDEI	CTNAG	5 cut(s)	488, 1311, 1418, 1628, 1902
BstDSI	CCRYGG	1 cut(s)	1750
BstENI	CCTNNNNNAGG	1 cut(s)	1640
BstF5I	GGATG	5 cut(s)	191, 385, 569, 1102, 1908
BstFNI	CGCG	2 cut(s)	1059, 1203
BstH2I	RGCGCY	3 cut(s)	488, 1183, 1654
BstHHI	GCGC	4 cut(s)	481, 487, 1182, 1653
BstKTI	GATC	1 cut(s)	367
BstMAI	GTCTC	2 cut(s)	308, 588
BstMBI	GATC	1 cut(s)	364
BstMWI	GCNNNNNNNGC	4 cut(s)	509, 914, 1084, 1126
BstNI	CCWGG	1 cut(s)	32
BstNSI	RCATGY	1 cut(s)	1381
BstSCI	CCNGG	1 cut(s)	30
BstSLI	GKGCMC	2 cut(s)	207, 1636
BstUI	CGCG	2 cut(s)	1059, 1203
BstV1I	GCAGC	5 cut(s)	1337, 1378, 1436, 1528, 1858
BstV2I	GAAGAC	1 cut(s)	879
BsuRI	GGCC	7 cut(s)	842, 876, 1363, 1593, 1664, 1749, 2104
BtgI	CCRYGG	1 cut(s)	1750
BtrI	CACGTC	1 cut(s)	472
BtsCI	GGATG	5 cut(s)	191, 385, 569, 1102, 1908
BtsI	GCAGTG	2 cut(s)	714, 1873
BtsIMutI	CAGTG	6 cut(s)	714, 1750, 1846, 1873, 2049, 2057
Cac8I	GCNNGC	7 cut(s)	6, 282, 477, 483, 1195, 1801, 1977
CfoI	GCGC	4 cut(s)	481, 487, 1182, 1653
Cfr13I	GGNCC	5 cut(s)	841, 874, 1361, 1663, 2052
Csp6I	GTAC	3 cut(s)	26, 776, 898
CviAII	CATG	8 cut(s)	264, 848, 1378, 1751, 1765, 1789, 1894, 1922
CviQI	GTAC	3 cut(s)	26, 776, 898
DdeI	CTNAG	5 cut(s)	488, 1311, 1418, 1628, 1902
DpnI	GATC	1 cut(s)	366
DpnII	GATC	1 cut(s)	364
DraI	TTTAAA	1 cut(s)	951
EaeI	YGGCCR	2 cut(s)	1747, 2102
Eam1104I	CTCTTC	6 cut(s)	306, 519, 586, 1017, 1473, 2029
EarI	CTCTTC	6 cut(s)	306, 519, 586, 1017, 1473, 2029
Ecl136II	GAGCTC	1 cut(s)	2000
Eco130I	CCWWGG	3 cut(s)	1536, 1750, 1970
Eco24I	GRGCYC	1 cut(s)	2002
Eco47I	GGWCC	1 cut(s)	2052
Eco47III	AGCGCT	1 cut(s)	1652
Eco53kI	GAGCTC	1 cut(s)	2000
Eco57I	CTGAAG	2 cut(s)	873, 1721
Eco88I	CYCGRG	1 cut(s)	1637
EcoICRI	GAGCTC	1 cut(s)	2000
EcoNI	CCTNNNNNAGG	1 cut(s)	1640
EcoO109I	RGGNCCY	2 cut(s)	841, 874
EcoRII	CCWGG	1 cut(s)	30
EcoT14I	CCWWGG	3 cut(s)	1536, 1750, 1970
EcoT38I	GRGCYC	1 cut(s)	2002
ErhI	CCWWGG	3 cut(s)	1536, 1750, 1970
FaeI	CATG	8 cut(s)	267, 851, 1381, 1754, 1768, 1792, 1897, 1925
FalI	AAGNNNNNCTT	4 cut(s)	516, 548, 1694, 1726
FaqI	GGGAC	1 cut(s)	840
FatI	CATG	8 cut(s)	263, 847, 1377, 1750, 1764, 1788, 1893, 1921
FauI	CCCGC	1 cut(s)	1208
FauNDI	CATATG	2 cut(s)	1683, 1981
FbaI	TGATCA	1 cut(s)	364
FblI	GTMKAC	1 cut(s)	1014
Fnu4HI	GCNGC	7 cut(s)	1326, 1364, 1367, 1425, 1542, 1557, 1872
FokI	GGATG	5 cut(s)	198, 392, 556, 1109, 1895
FriOI	GRGCYC	1 cut(s)	2002
Fsp4HI	GCNGC	7 cut(s)	1326, 1364, 1367, 1425, 1542, 1557, 1872
FspBI	CTAG	4 cut(s)	72, 210, 762, 1428
GlaI	GCGC	4 cut(s)	480, 486, 1181, 1652
GluI	GCNGC	7 cut(s)	1326, 1364, 1367, 1425, 1542, 1557, 1872
GsaI	CCCAGC	1 cut(s)	1152
HaeII	RGCGCY	3 cut(s)	488, 1183, 1654
HaeIII	GGCC	7 cut(s)	842, 876, 1363, 1593, 1664, 1749, 2104
HhaI	GCGC	4 cut(s)	481, 487, 1182, 1653
Hin1II	CATG	8 cut(s)	267, 851, 1381, 1754, 1768, 1792, 1897, 1925
Hin6I	GCGC	4 cut(s)	479, 485, 1180, 1651
HinP1I	GCGC	4 cut(s)	479, 485, 1180, 1651
HindIII	AAGCTT	4 cut(s)	6, 490, 1037, 2031
HinfI	GANTC	4 cut(s)	608, 862, 880, 2063
HphI	GGTGA	5 cut(s)	143, 350, 362, 557, 2131
Hpy166II	GTNNAC	2 cut(s)	1015, 2122
Hpy188I	TCNGA	7 cut(s)	185, 322, 590, 731, 1261, 1701, 1905
Hpy188III	TCNNGA	5 cut(s)	210, 720, 866, 1639, 2067
Hpy8I	GTNNAC	2 cut(s)	1015, 2122
HpyCH4III	ACNGT	6 cut(s)	498, 625, 695, 1816, 1859, 2044
HpyCH4IV	ACGT	1 cut(s)	471
HpyCH4V	TGCA	8 cut(s)	4, 707, 931, 1197, 1424, 1850, 1874, 1979
HpyF10VI	GCNNNNNNNGC	4 cut(s)	509, 914, 1084, 1126
HpyF3I	CTNAG	5 cut(s)	488, 1311, 1418, 1628, 1902
HpySE526I	ACGT	1 cut(s)	471
Hsp92II	CATG	8 cut(s)	267, 851, 1381, 1754, 1768, 1792, 1897, 1925
HspAI	GCGC	4 cut(s)	479, 485, 1180, 1651
KpnI	GGTACC	1 cut(s)	779
Ksp22I	TGATCA	1 cut(s)	364
Kzo9I	GATC	1 cut(s)	364
LmnI	GCTCC	3 cut(s)	277, 944, 1585
Lsp1109I	GCAGC	5 cut(s)	1337, 1378, 1436, 1528, 1858
LweI	GCATC	2 cut(s)	994, 1065
MaeI	CTAG	4 cut(s)	72, 210, 762, 1428
MaeII	ACGT	1 cut(s)	471
MaeIII	GTNAC	4 cut(s)	787, 1280, 1819, 1924
MalI	GATC	1 cut(s)	366
MboI	GATC	1 cut(s)	364
MfeI	CAATTG	1 cut(s)	285
MhlI	GDGCHC	5 cut(s)	207, 1122, 1176, 1636, 2002
MlsI	TGGCCA	1 cut(s)	1749
MluCI	AATT	9 cut(s)	62, 173, 285, 442, 725, 735, 976, 1388, 1566
MluI	ACGCGT	1 cut(s)	1057
MluNI	TGGCCA	1 cut(s)	1749
MmeI	TCCRAC	1 cut(s)	1332
Mox20I	TGGCCA	1 cut(s)	1749
MroXI	GAANNNNTTC	1 cut(s)	528
MscI	TGGCCA	1 cut(s)	1749
MslI	CAYNNNNRTG	5 cut(s)	372, 803, 1115, 1407, 1727
Msp20I	TGGCCA	1 cut(s)	1749
MspA1I	CMGCKG	1 cut(s)	512
MspCI	CTTAAG	3 cut(s)	533, 635, 1688
MspR9I	CCNGG	1 cut(s)	32
MunI	CAATTG	1 cut(s)	285
Mva1269I	GAATGC	4 cut(s)	347, 933, 1255, 1519
MvaI	CCWGG	1 cut(s)	32
MvnI	CGCG	2 cut(s)	1059, 1203
MwoI	GCNNNNNNNGC	4 cut(s)	509, 914, 1084, 1126
NcoI	CCATGG	1 cut(s)	1750
NdeI	CATATG	2 cut(s)	1683, 1981
NdeII	GATC	1 cut(s)	364
NlaIII	CATG	8 cut(s)	267, 851, 1381, 1754, 1768, 1792, 1897, 1925
NlaIV	GGNNCC	3 cut(s)	777, 1155, 1362
NmuCI	GTSAC	2 cut(s)	1819, 1924
NspI	RCATGY	1 cut(s)	1381
OliI	CACNNNNGTG	1 cut(s)	1115
PaeR7I	CTCGAG	1 cut(s)	1637
PciI	ACATGT	1 cut(s)	1377
PctI	GAATGC	4 cut(s)	347, 933, 1255, 1519
PdmI	GAANNNNTTC	1 cut(s)	528
PfeI	GAWTC	4 cut(s)	608, 862, 880, 2063
PkrI	GCNGC	7 cut(s)	1327, 1365, 1368, 1426, 1543, 1558, 1873
PscI	ACATGT	1 cut(s)	1377
Psp124BI	GAGCTC	1 cut(s)	2002
Psp6I	CCWGG	1 cut(s)	30
PspFI	CCCAGC	1 cut(s)	1148
PspGI	CCWGG	1 cut(s)	30
PspN4I	GGNNCC	3 cut(s)	777, 1155, 1362
PspPI	GGNCC	5 cut(s)	841, 874, 1361, 1663, 2052
PvuII	CAGCTG	1 cut(s)	512
RsaI	GTAC	3 cut(s)	27, 777, 899
RsaNI	GTAC	3 cut(s)	26, 776, 898
RseI	CAYNNNNRTG	5 cut(s)	372, 803, 1115, 1407, 1727
SacI	GAGCTC	1 cut(s)	2002
SatI	GCNGC	7 cut(s)	1326, 1364, 1367, 1425, 1542, 1557, 1872
Sau3AI	GATC	1 cut(s)	364
Sau96I	GGNCC	5 cut(s)	841, 874, 1361, 1663, 2052
ScrFI	CCNGG	1 cut(s)	32
SduI	GDGCHC	5 cut(s)	207, 1122, 1176, 1636, 2002
SfaNI	GCATC	2 cut(s)	994, 1065
Sfr274I	CTCGAG	1 cut(s)	1637
SinI	GGWCC	1 cut(s)	2052
SlaI	CTCGAG	1 cut(s)	1637
SmiMI	CAYNNNNRTG	5 cut(s)	372, 803, 1115, 1407, 1727
SmlI	CTYRAG	6 cut(s)	533, 635, 854, 1040, 1637, 1688
SmoI	CTYRAG	6 cut(s)	533, 635, 854, 1040, 1637, 1688
Sse9I	AATT	9 cut(s)	62, 173, 285, 442, 725, 735, 976, 1388, 1566
SsiI	CCGC	6 cut(s)	612, 1201, 1364, 1517, 1556, 1891
SspMI	CTAG	4 cut(s)	72, 210, 762, 1428
SstI	GAGCTC	1 cut(s)	2002
StyD4I	CCNGG	1 cut(s)	30
StyI	CCWWGG	3 cut(s)	1536, 1750, 1970
TaaI	ACNGT	6 cut(s)	498, 625, 695, 1816, 1859, 2044
TaiI	ACGT	1 cut(s)	474
TaqI	TCGA	5 cut(s)	370, 627, 1638, 1736, 2002
TaqII	GACCGA	1 cut(s)	2040
TasI	AATT	9 cut(s)	62, 173, 285, 442, 725, 735, 976, 1388, 1566
TauI	GCSGC	2 cut(s)	1366, 1559
TfiI	GAWTC	4 cut(s)	608, 862, 880, 2063
TscAI	CASTG	6 cut(s)	714, 1750, 1846, 1873, 2049, 2064
TseFI	GTSAC	2 cut(s)	1819, 1924
TseI	GCWGC	5 cut(s)	1325, 1366, 1424, 1541, 1871
Tsp45I	GTSAC	2 cut(s)	1819, 1924
TspDTI	ATGAA	7 cut(s)	429, 474, 655, 673, 836, 1401, 1910
TspGWI	ACGGA	1 cut(s)	873
TspRI	CASTG	6 cut(s)	714, 1750, 1846, 1873, 2049, 2064
Vha464I	CTTAAG	3 cut(s)	533, 635, 1688
VpaK11BI	GGWCC	1 cut(s)	2052
XagI	CCTNNNNNAGG	1 cut(s)	1640
XapI	RAATTY	3 cut(s)	62, 173, 1566
XbaI	TCTAGA	1 cut(s)	209
XceI	RCATGY	1 cut(s)	1381
XcmI	CCANNNNNNNNNTGG	2 cut(s)	38, 910
XhoI	CTCGAG	1 cut(s)	1637
XmiI	GTMKAC	1 cut(s)	1014
XmnI	GAANNNNTTC	1 cut(s)	528
XspI	CTAG	4 cut(s)	72, 210, 762, 1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.