Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0008783

Physical Location & Seq

Genomic Coordinates Forward (+)

26769773 .. 26771690

Gene Structure 1918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G011910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGACTGAGAAACAAGACCACAACTCAACTCAGCTGGCTTTGCAATTCTGGAGTTTCAGACTTGCTAGCAATTGTGAGCCCAACAAGGGCTCTTCTTTTGTGTCGGCTTGGGCTTTGGAGGAACAAGCTATTGGGAATGAGATTAGTGTAGACAAATCGCAACATGGGTTGTTAGGGGAATGTGAGAGCAAGGATGTTGTTGTGGAGGGAATTGAGGAGAGTGAAATTGTTGATGTGCGTGCGCTGGCATCGAGCTTACAGTTTGCGAAAACAGCAGATGATGTGGAAGAGGTTCTGAAGGACAAGGGTAATTTGCCTCTTCAAGTATTCTCATCCATGATCAGGGGTTTTGGAAGAGACAAGTTGATGGATTCCGCGTTTGCTGTTGTTGAATGGCTTAAGAGGAGGAAGGAAGAAACTAATGGTATGATTACCCCAAATTTATTTATCTTTAATAGTCTATTGGGTGCAGTGAAGCAATCTAAACAGTTTGGAGAAATGGATAAAGTCTTGGCTGATATGACGCAGGAAGGGGTGGAACCGAATGTTATAACTTACAATACTATAATGGCAATTTATGTAGAACAAGGACTAAGTAGTAAGGCCCTTGATGTTCTTGAGGATATTCAGAAGAAGGGCTTGATTCCATCTTCAGTGACCTACTCTACAGCATTGCTGGCTTATCAGAGAATGCAAGATGGAGTTGGAGCCTTAGAGTTCTTTGTCGAGGTCAGAGAAAAGTATCGTAATGGTGATATATGTAAAGTTTCAGAAGAAGACTGGGAAAATGAATTTCTAAAGCTCGAGAACTTTACAAAACGTGTTTGCTACCAAGTGATGCGGCGGTGGCTTGTGGTGGATGATAATTTAAGCATCAGTGTGCTAAAACTTCTAGTAAAGATGGATAATGCTGGGAGAAAAAAGGGAATTTGGAGATGGGGTGTCAGGTTGCTCAACAAGATGGAAGAGAAAGGTCTTAAACCAAGAAGTAAGGAATGGAATGCAGTTCTAGTTGCCTGTTCTAAGGCTGCAGAAACTTCTGCTGCTGTTCAGATTTTTAGAAGAATGGTAGAACAAGGTCAAAAACCCACAATCCTTTCTTATGGGGCCTTGCTCAGTGCTCTTGAAAAGGGGAAACTCTATGATGAGGCTCACCAGGTGTGGGAACATATGATCAAGGTTGGTGTAAAACCCAACCTGTATGCGTACACAATCATGGCCTCAGTTTTCAGTGGACAAGGAAAATTTAATTTGGTGGAGACCATTGTTCAAGAGATGGTTTCATCAGGGATTGAGCCAACGGTAGTCACATACAATGCAATTATTAGTGGCTGTGCACGAAATGATTCAAGCAGTGCTGATGCATATGACTGGTTTGATCGGATGAAAGCTAACAATATTCCTCCAAACAATGTTACTTATGAAATGATGATCGAGGCTCTTGCTAAAGAAGGTAAACCAAGGCTTGCATACGAGTTATATTTGAGGGCTCAAAACCAGGGCATTCACCTCTCTGCAAAGGCTTATGATATTTTGGTCCAACCCTCAATGGTTTCTGGAGCTAGTTTTGATCTAAAACTCTTAGGGCCTCGTCCACCTGAGCAGAAAAAGGAAAATTTGCGAGGTAGAAAATCTTCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

547

Amino Acids

61.45

Weight (kDa)

5.98

Isoelectric Point (pI)

35.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	144 - 195	1.3e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	146 - 190	2.1e-08	PPR repeat family
PPR_3	PF13812	169 - 228	2.3e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	181 - 225	3.6e-11	PPR repeat family
PPR_long	PF17177	294 - 398	5.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	316 - 375	8.8e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	363 - 408	3e-08	PPR repeat family
PPR_long	PF17177	382 - 501	3.4e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	389 - 446	3.8e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	410 - 447	1.4e-06	PPR repeat family
PPR_3	PF13812	422 - 481	1.5e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	454 - 483	1e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46610 AT3G46610
fragaria_vesca	FvH4_7g06820 FvH4_7g06820 FvH4_7g06820
malus_domestica	MD09G1019500.v1.1 MD17G1020100.v1.1
prunus_persica	Prupe.2G095300_v2.0.a1 Prupe.2G095300_v2.0.a1
pyrus_communis	pycom111g01620
rosa_chinensis	RchiOBHm_Chr1g0336521
rosa_laevigata	RLG00000029357
rosa_multiflora	Rmu_sc0001981.1_g000003 Rmu_sc0005044.1_g000026 Rmu_sc0009324.1_g000001
rosa_roxburghii	Rroxscaffold_4G00315530
rosa_rugosa	Rorug01G0125900
rosa_samantha	Rh1AG147000 Rh1BG115100 Rh1CG138300 Rh1DG153700
rosa_wichuraiana	Rw1G009520 Rw1G011910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	551
AccI	GTMKAC	1 cut(s)	150
AccII	CGCG	1 cut(s)	377
AciI	CCGC	3 cut(s)	375, 841, 844
AcsI	RAATTY	5 cut(s)	439, 791, 927, 1244, 1615
AcuI	CTGAAG	2 cut(s)	317, 636
AdeI	CACNNNGTG	1 cut(s)	1159
AfaI	GTAC	1 cut(s)	1208
AfiI	CCNNNNNNNGG	3 cut(s)	86, 342, 1162
AflII	CTTAAG	1 cut(s)	398
AflIII	ACRYGT	1 cut(s)	820
AgsI	TTSAA	5 cut(s)	323, 392, 1127, 1271, 1350
AjnI	CCWGG	2 cut(s)	1155, 1497
AjuI	GAANNNNNNNTTGG	2 cut(s)	114, 146
AluBI	AGCT	6 cut(s)	34, 128, 255, 802, 1391, 1562
AluI	AGCT	6 cut(s)	34, 128, 255, 802, 1391, 1562
Alw21I	GWGCWC	2 cut(s)	1123, 1339
Alw26I	GTCTC	2 cut(s)	351, 1253
Alw44I	GTGCAC	1 cut(s)	1335
Ama87I	CYCGRG	1 cut(s)	803
AoxI	GGCC	4 cut(s)	603, 1107, 1218, 1586
ApaLI	GTGCAC	1 cut(s)	1335
ApeKI	GCWGC	2 cut(s)	1028, 1043
ApoI	RAATTY	5 cut(s)	439, 791, 927, 1244, 1615
Asp700I	GAANNNNTTC	3 cut(s)	291, 1345, 1633
AspLEI	GCGC	1 cut(s)	244
AspS9I	GGNCC	4 cut(s)	604, 1107, 1537, 1586
AsuHPI	GGTGA	3 cut(s)	764, 1145, 1499
AsuNHI	GCTAGC	1 cut(s)	65
AvaI	CYCGRG	1 cut(s)	803
AvaII	GGWCC	1 cut(s)	1537
BaeGI	GKGCMC	1 cut(s)	1339
BanII	GRGCYC	3 cut(s)	81, 92, 1492
BarI	GAAGNNNNNNTAC	1 cut(s)	1618
BbsI	GAAGAC	1 cut(s)	783
Bbv12I	GWGCWC	2 cut(s)	1123, 1339
BbvI	GCAGC	2 cut(s)	1015, 1030
BccI	CCATC	7 cut(s)	361, 655, 692, 895, 930, 955, 1270
BcgI	CGANNNNNNTGC	2 cut(s)	1424, 1458
BciT130I	CCWGG	2 cut(s)	1157, 1499
BclI	TGATCA	2 cut(s)	339, 1173
BcoDI	GTCTC	2 cut(s)	351, 1253
BfaI	CTAG	4 cut(s)	66, 893, 1010, 1563
BfmI	CTRYAG	2 cut(s)	666, 1029
BfrI	CTTAAG	1 cut(s)	398
BisI	GCNGC	3 cut(s)	842, 1029, 1044
BlsI	GCNGC	3 cut(s)	843, 1030, 1045
Bme1390I	CCNGG	2 cut(s)	1157, 1499
Bme18I	GGWCC	1 cut(s)	1537
BmeT110I	CYCGRG	1 cut(s)	803
BmgT120I	GGNCC	4 cut(s)	604, 1107, 1537, 1586
BmiI	GGNNCC	3 cut(s)	540, 709, 1108
BmrFI	CCNGG	2 cut(s)	1157, 1499
BmrI	ACTGGG	1 cut(s)	790
BmsI	GCATC	4 cut(s)	257, 828, 882, 1351
BmtI	GCTAGC	1 cut(s)	69
BmuI	ACTGGG	1 cut(s)	790
BpiI	GAAGAC	1 cut(s)	783
BpmI	CTGGAG	2 cut(s)	70, 1578
Bpu10I	CCTNAGC	1 cut(s)	1599
BpuEI	CTTGAG	1 cut(s)	638
BsaI	GGTCTC	1 cut(s)	1253
BsaJI	CCNNGG	2 cut(s)	1460, 1498
BsaXI	ACNNNNNCTCC	2 cut(s)	925, 955
Bsc4I	CCNNNNNNNGG	3 cut(s)	86, 342, 1162
Bse1I	ACTGG	2 cut(s)	785, 1376
Bse3DI	GCAATG	1 cut(s)	671
BseBI	CCWGG	2 cut(s)	1157, 1499
BseDI	CCNNGG	2 cut(s)	1460, 1498
BseGI	GGATG	4 cut(s)	199, 332, 865, 1389
BseLI	CCNNNNNNNGG	3 cut(s)	86, 342, 1162
BseMI	GCAATG	1 cut(s)	671
BseMII	CTCAG	4 cut(s)	44, 1129, 1236, 1590
BseNI	ACTGG	2 cut(s)	785, 1376
BseRI	GAGGAG	2 cut(s)	230, 418
BseSI	GKGCMC	1 cut(s)	1339
BseXI	GCAGC	2 cut(s)	1015, 1030
BseYI	CCCAGC	1 cut(s)	911
BsgI	GTGCAG	1 cut(s)	489
Bsh1236I	CGCG	1 cut(s)	377
BshFI	GGCC	4 cut(s)	605, 1109, 1220, 1588
BsiHKAI	GWGCWC	2 cut(s)	1123, 1339
BsiHKCI	CYCGRG	1 cut(s)	803
BslI	CCNNNNNNNGG	3 cut(s)	86, 342, 1162
BsmAI	GTCTC	2 cut(s)	351, 1253
BsmI	GAATGC	3 cut(s)	696, 1006, 1503
BsnI	GGCC	4 cut(s)	605, 1109, 1220, 1588
Bso31I	GGTCTC	1 cut(s)	1253
BsoBI	CYCGRG	1 cut(s)	803
Bsp1286I	GDGCHC	5 cut(s)	81, 92, 1123, 1339, 1492
Bsp143I	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
BspACI	CCGC	3 cut(s)	375, 841, 844
BspANI	GGCC	4 cut(s)	605, 1109, 1220, 1588
BspCNI	CTCAG	4 cut(s)	43, 1128, 1235, 1591
BspFNI	CGCG	1 cut(s)	377
BspLI	GGNNCC	3 cut(s)	540, 709, 1108
BspMAI	CTGCAG	1 cut(s)	1033
BspOI	GCTAGC	1 cut(s)	69
BspQI	GCTCTTC	1 cut(s)	97
BspTI	CTTAAG	1 cut(s)	398
BspTNI	GGTCTC	1 cut(s)	1253
BsrDI	GCAATG	1 cut(s)	671
BsrI	ACTGG	2 cut(s)	785, 1376
BssECI	CCNNGG	2 cut(s)	1460, 1498
BssMI	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
BssT1I	CCWWGG	1 cut(s)	1460
Bst2UI	CCWGG	2 cut(s)	1157, 1499
Bst4CI	ACNGT	3 cut(s)	261, 489, 1303
Bst6I	CTCTTC	5 cut(s)	97, 282, 324, 349, 960
BstAFI	CTTAAG	1 cut(s)	398
BstC8I	GCNNGC	6 cut(s)	36, 67, 240, 246, 678, 1467
BstDEI	CTNAG	9 cut(s)	6, 30, 593, 712, 1023, 1115, 1222, 1582, 1599
BstF5I	GGATG	4 cut(s)	199, 332, 865, 1389
BstFNI	CGCG	1 cut(s)	377
BstHHI	GCGC	1 cut(s)	244
BstKTI	GATC	5 cut(s)	342, 1176, 1381, 1434, 1573
BstMAI	GTCTC	2 cut(s)	351, 1253
BstMBI	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
BstMWI	GCNNNNNNNGC	4 cut(s)	40, 272, 677, 847
BstNI	CCWGG	2 cut(s)	1157, 1499
BstSCI	CCNGG	2 cut(s)	1155, 1497
BstSFI	CTRYAG	2 cut(s)	666, 1029
BstSLI	GKGCMC	1 cut(s)	1339
BstUI	CGCG	1 cut(s)	377
BstV1I	GCAGC	2 cut(s)	1015, 1030
BstV2I	GAAGAC	1 cut(s)	783
BsuRI	GGCC	4 cut(s)	605, 1109, 1220, 1588
BtsCI	GGATG	4 cut(s)	199, 332, 865, 1389
BtsI	GCAGTG	2 cut(s)	477, 1360
BtsIMutI	CAGTG	6 cut(s)	477, 660, 883, 1123, 1237, 1360
Cac8I	GCNNGC	6 cut(s)	36, 67, 240, 246, 678, 1467
CfoI	GCGC	1 cut(s)	244
Cfr13I	GGNCC	4 cut(s)	604, 1107, 1537, 1586
CseI	GACGC	1 cut(s)	532
CsiI	ACCWGGT	1 cut(s)	1155
Csp6I	GTAC	1 cut(s)	1207
CviAII	CATG	3 cut(s)	164, 337, 1216
CviQI	GTAC	1 cut(s)	1207
DdeI	CTNAG	9 cut(s)	6, 30, 593, 712, 1023, 1115, 1222, 1582, 1599
DpnI	GATC	5 cut(s)	341, 1175, 1380, 1433, 1572
DpnII	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
DraIII	CACNNNGTG	1 cut(s)	1159
Eam1104I	CTCTTC	5 cut(s)	97, 282, 324, 349, 960
EarI	CTCTTC	5 cut(s)	97, 282, 324, 349, 960
Eco130I	CCWWGG	1 cut(s)	1460
Eco24I	GRGCYC	3 cut(s)	81, 92, 1492
Eco31I	GGTCTC	1 cut(s)	1253
Eco47I	GGWCC	1 cut(s)	1537
Eco57I	CTGAAG	2 cut(s)	317, 636
Eco88I	CYCGRG	1 cut(s)	803
EcoO109I	RGGNCCY	3 cut(s)	604, 1107, 1586
EcoRII	CCWGG	2 cut(s)	1155, 1497
EcoT14I	CCWWGG	1 cut(s)	1460
EcoT22I	ATGCAT	1 cut(s)	1366
EcoT38I	GRGCYC	3 cut(s)	81, 92, 1492
ErhI	CCWWGG	1 cut(s)	1460
FaeI	CATG	3 cut(s)	167, 340, 1219
FalI	AAGNNNNNCTT	2 cut(s)	623, 655
FatI	CATG	3 cut(s)	163, 336, 1215
FauNDI	CATATG	2 cut(s)	1170, 1366
FbaI	TGATCA	2 cut(s)	339, 1173
FblI	GTMKAC	1 cut(s)	150
Fnu4HI	GCNGC	3 cut(s)	842, 1029, 1044
FokI	GGATG	4 cut(s)	206, 319, 872, 1396
FriOI	GRGCYC	3 cut(s)	81, 92, 1492
Fsp4HI	GCNGC	3 cut(s)	842, 1029, 1044
FspBI	CTAG	4 cut(s)	66, 893, 1010, 1563
GlaI	GCGC	1 cut(s)	243
GluI	GCNGC	3 cut(s)	842, 1029, 1044
GsaI	CCCAGC	1 cut(s)	915
GsuI	CTGGAG	2 cut(s)	70, 1578
HaeIII	GGCC	4 cut(s)	605, 1109, 1220, 1588
HgaI	GACGC	1 cut(s)	532
HhaI	GCGC	1 cut(s)	244
Hin1II	CATG	3 cut(s)	167, 340, 1219
Hin6I	GCGC	1 cut(s)	242
HinP1I	GCGC	1 cut(s)	242
HinfI	GANTC	3 cut(s)	371, 643, 1346
HphI	GGTGA	3 cut(s)	764, 1145, 1499
Hpy166II	GTNNAC	6 cut(s)	151, 1209, 1235, 1337, 1457, 1595
Hpy188I	TCNGA	8 cut(s)	59, 297, 630, 687, 734, 772, 1053, 1383
Hpy188III	TCNNGA	6 cut(s)	49, 617, 805, 1124, 1271, 1557
Hpy8I	GTNNAC	6 cut(s)	151, 1209, 1235, 1337, 1457, 1595
HpyAV	CCTTC	5 cut(s)	292, 403, 524, 628, 1445
HpyCH4III	ACNGT	3 cut(s)	261, 489, 1303
HpyCH4IV	ACGT	1 cut(s)	820
HpyF10VI	GCNNNNNNNGC	4 cut(s)	40, 272, 677, 847
HpyF3I	CTNAG	9 cut(s)	6, 30, 593, 712, 1023, 1115, 1222, 1582, 1599
HpySE526I	ACGT	1 cut(s)	820
Hsp92II	CATG	3 cut(s)	167, 340, 1219
HspAI	GCGC	1 cut(s)	242
Ksp22I	TGATCA	2 cut(s)	339, 1173
Kzo9I	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
LguI	GCTCTTC	1 cut(s)	97
LmnI	GCTCC	2 cut(s)	707, 1559
Lsp1109I	GCAGC	2 cut(s)	1015, 1030
LweI	GCATC	4 cut(s)	257, 828, 882, 1351
MabI	ACCWGGT	1 cut(s)	1155
MaeI	CTAG	4 cut(s)	66, 893, 1010, 1563
MaeII	ACGT	1 cut(s)	820
MaeIII	GTNAC	3 cut(s)	655, 1306, 1414
MalI	GATC	5 cut(s)	341, 1175, 1380, 1433, 1572
MboI	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
MfeI	CAATTG	1 cut(s)	70
MhlI	GDGCHC	5 cut(s)	81, 92, 1123, 1339, 1492
MmeI	TCCRAC	2 cut(s)	685, 1564
Mph1103I	ATGCAT	1 cut(s)	1366
MroXI	GAANNNNTTC	3 cut(s)	291, 1345, 1633
MseI	TTAA	5 cut(s)	399, 453, 869, 978, 1248
MslI	CAYNNNNRTG	2 cut(s)	878, 1214
MspA1I	CMGCKG	1 cut(s)	34
MspCI	CTTAAG	1 cut(s)	398
MspR9I	CCNGG	2 cut(s)	1157, 1499
MunI	CAATTG	1 cut(s)	70
Mva1269I	GAATGC	3 cut(s)	696, 1006, 1503
MvaI	CCWGG	2 cut(s)	1157, 1499
MvnI	CGCG	1 cut(s)	377
MwoI	GCNNNNNNNGC	4 cut(s)	40, 272, 677, 847
NdeI	CATATG	2 cut(s)	1170, 1366
NdeII	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
NheI	GCTAGC	1 cut(s)	65
NlaIII	CATG	3 cut(s)	167, 340, 1219
NlaIV	GGNNCC	3 cut(s)	540, 709, 1108
NmuCI	GTSAC	2 cut(s)	655, 1306
NsiI	ATGCAT	1 cut(s)	1366
PaeR7I	CTCGAG	1 cut(s)	803
PciSI	GCTCTTC	1 cut(s)	97
PctI	GAATGC	3 cut(s)	696, 1006, 1503
PdmI	GAANNNNTTC	3 cut(s)	291, 1345, 1633
PfeI	GAWTC	3 cut(s)	371, 643, 1346
PkrI	GCNGC	3 cut(s)	843, 1030, 1045
PsiI	TTATAA	1 cut(s)	551
Psp6I	CCWGG	2 cut(s)	1155, 1497
PspFI	CCCAGC	1 cut(s)	911
PspGI	CCWGG	2 cut(s)	1155, 1497
PspN4I	GGNNCC	3 cut(s)	540, 709, 1108
PspPI	GGNCC	4 cut(s)	604, 1107, 1537, 1586
PstI	CTGCAG	1 cut(s)	1033
PvuII	CAGCTG	1 cut(s)	34
RsaI	GTAC	1 cut(s)	1208
RsaNI	GTAC	1 cut(s)	1207
RseI	CAYNNNNRTG	2 cut(s)	878, 1214
SapI	GCTCTTC	1 cut(s)	97
SaqAI	TTAA	5 cut(s)	399, 453, 869, 978, 1248
SatI	GCNGC	3 cut(s)	842, 1029, 1044
Sau3AI	GATC	5 cut(s)	339, 1173, 1378, 1431, 1570
Sau96I	GGNCC	4 cut(s)	604, 1107, 1537, 1586
ScrFI	CCNGG	2 cut(s)	1157, 1499
SduI	GDGCHC	5 cut(s)	81, 92, 1123, 1339, 1492
SexAI	ACCWGGT	1 cut(s)	1155
SfaNI	GCATC	4 cut(s)	257, 828, 882, 1351
SfcI	CTRYAG	2 cut(s)	666, 1029
Sfr274I	CTCGAG	1 cut(s)	803
SinI	GGWCC	1 cut(s)	1537
SlaI	CTCGAG	1 cut(s)	803
SmiMI	CAYNNNNRTG	2 cut(s)	878, 1214
SmlI	CTYRAG	3 cut(s)	398, 617, 803
SmoI	CTYRAG	3 cut(s)	398, 617, 803
SsiI	CCGC	3 cut(s)	375, 841, 844
SspI	AATATT	1 cut(s)	1399
SspMI	CTAG	4 cut(s)	66, 893, 1010, 1563
StyD4I	CCNGG	2 cut(s)	1155, 1497
StyI	CCWWGG	1 cut(s)	1460
TaaI	ACNGT	3 cut(s)	261, 489, 1303
TaiI	ACGT	1 cut(s)	823
TaqI	TCGA	4 cut(s)	251, 726, 804, 1434
TauI	GCSGC	1 cut(s)	844
TfiI	GAWTC	3 cut(s)	371, 643, 1346
Tru1I	TTAA	5 cut(s)	399, 453, 869, 978, 1248
Tru9I	TTAA	5 cut(s)	399, 453, 869, 978, 1248
TscAI	CASTG	6 cut(s)	477, 660, 883, 1123, 1237, 1360
TseFI	GTSAC	2 cut(s)	655, 1306
TseI	GCWGC	2 cut(s)	1028, 1043
Tsp45I	GTSAC	2 cut(s)	655, 1306
TspDTI	ATGAA	4 cut(s)	804, 1272, 1400, 1437
TspRI	CASTG	6 cut(s)	477, 660, 883, 1123, 1237, 1360
Vha464I	CTTAAG	1 cut(s)	398
VneI	GTGCAC	1 cut(s)	1335
VpaK11BI	GGWCC	1 cut(s)	1537
XapI	RAATTY	5 cut(s)	439, 791, 927, 1244, 1615
XhoI	CTCGAG	1 cut(s)	803
XmiI	GTMKAC	1 cut(s)	150
XmnI	GAANNNNTTC	3 cut(s)	291, 1345, 1633
XspI	CTAG	4 cut(s)	66, 893, 1010, 1563
Zsp2I	ATGCAT	1 cut(s)	1366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.