Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009324.1

Orthogroup ID

OG0008783

Physical Location & Seq

Genomic Coordinates Forward (+)

1882 .. 3939

Gene Structure 2058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009324.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

atgcaagctttaatcactctgccctctagagctgaaacctggatactcccccagttgggttcttgtaaactcagtactcggagaaggagaagaaaaaagatgtggggtcttgcttttcctgtttgctgttgtacaactagtgcagttttcaaatttggttttggatgtgggagtgtttctaggtactctgaacttagacttgctagcaattgtgagctcaacaagggctcttcttttgtgtcggcttgggctttggaggaacaagctattgggaatgagattagtgtagacaaatcgcaacatgggttgttaggggaatgtgagagcaaggatgttgttgtggagggaattgaggagagtgaaattgttgatgtgcgtgcgctggcatcgagcttacagtttgcgaaaacagcagatgatgtggaagaggttctgaaggacaagggtaatttgcctcttcaagtattctcatccatgatcaggggttttggaagagacaagtttatggattccgcgtttgctgttgttgaatggcttaagaggaggaaggaagaaactaatggtaagattatcccaaacttatttatctttaatagtctgttgggtgcagtgaagcagtctaaacagtttggagaaatggataaagtcttggctgatatgacgcaggaaggggtggaaccgaatgttataacttacaatactataatggcaatttatgtagaacaaggactaagtagtaaggcccttgatgttcttgaggatattcagaagaagggcttgattccatcttcagtgacctactctacagcattgctggcttatcagagaatgcaagatggaattggagccttagagttctttgtcaaggtcagagaaaagtatcgtgatggtgatatatgtaaagtttcagaagaagactgggaaaatgagtttctaaagcttgagaactttacaaaacgtgtttgctaccaagtgatgcggcggtggcttgtgatggatgataatttaagcatcaatgtgctaaaacttctagtaaagatggataatgctggggtcccacttggtcgggcagaacatgagcgccttctgtgggcttgtacccgtggagaccattataatgtggcaaaagaattgtatagtaggataagagaaaggcattctgaaataagtctatctgtctgtaatcacgttatttgggtgatgggaaaggctaagaaatggtgggcagctttggagatttatgaggatatgttggacaaggggccaaagccaaacaacatgtcatatgaattggtagtatctcacttcaatgttcttctgactgctgctagaaaaaagggtatttggagatggggtgtcaggttgctcaacaagatggaagagaaaggtcttaaaccgaggagtaaggaatggaatgcagttctagttgcctgttccaaggctgcagaaacttctactgctgtccagatttttagaagaatggtagaacaaggtcaaaaacccacaatcctttcttatggggccttgctcagtgcccttgaaaaggggaaactctatgatgaggctcgccaggtgtgggaacatatgatcaaggttggtgtaaaacccaacctgtatgcatacacaatcatggcctcagttttcagtggacaaggaaaatttaatttggtagagaccattgttcaagagatggtttcatcagagattgagccaacggtagtcacatacaatgcaattattagtggctgtgcacgaaatgattcaagcagtgctgatgcatatggctggtttgatcggatgaaagctaacaatattcctccaaacaatgttacttatgaaatgatgatcgaggctcttgctaaggaaggtaaaccaaggcttgcatacgagttatatttgagggctcaaaaccagggcattcacctctccgcaaaggcttatgatattttggtccaaccctcaatggtttctggagctagttttgatctaaaactcttagggcctcgtccacctgagcagaaaaaggaaaatttgcaaggtagaaaatcttctacctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

685

Amino Acids

77.31

Weight (kDa)

8.71

Isoelectric Point (pI)

39.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46610 AT3G46610
fragaria_vesca	FvH4_7g06820 FvH4_7g06820 FvH4_7g06820
malus_domestica	MD09G1019500.v1.1 MD17G1020100.v1.1
prunus_persica	Prupe.2G095300_v2.0.a1 Prupe.2G095300_v2.0.a1
pyrus_communis	pycom111g01620
rosa_chinensis	RchiOBHm_Chr1g0336521
rosa_laevigata	RLG00000029357
rosa_multiflora	Rmu_sc0001981.1_g000003 Rmu_sc0005044.1_g000026 Rmu_sc0009324.1_g000001
rosa_roxburghii	Rroxscaffold_4G00315530
rosa_rugosa	Rorug01G0125900
rosa_samantha	Rh1AG147000 Rh1BG115100 Rh1CG138300 Rh1DG153700
rosa_wichuraiana	Rw1G009520 Rw1G011910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	689, 1116
AccI	GTMKAC	1 cut(s)	288
AccII	CGCG	1 cut(s)	515
AciI	CCGC	4 cut(s)	513, 979, 982, 1929
AcsI	RAATTY	3 cut(s)	152, 1658, 2029
AcuI	CTGAAG	2 cut(s)	455, 774
AfaI	GTAC	4 cut(s)	76, 133, 185, 1099
AfiI	CCNNNNNNNGG	6 cut(s)	55, 56, 480, 1090, 1543, 1576
AflII	CTTAAG	1 cut(s)	536
AflIII	ACRYGT	2 cut(s)	958, 1278
AgsI	TTSAA	7 cut(s)	151, 461, 530, 1309, 1541, 1685, 1764
AhlI	ACTAGT	1 cut(s)	137
AjnI	CCWGG	3 cut(s)	38, 1569, 1911
AjuI	GAANNNNNNNTTGG	2 cut(s)	252, 284
AluBI	AGCT	9 cut(s)	8, 32, 217, 266, 393, 940, 1229, 1805, 1976
AluI	AGCT	9 cut(s)	8, 32, 217, 266, 393, 940, 1229, 1805, 1976
Alw21I	GWGCWC	2 cut(s)	219, 1753
Alw26I	GTCTC	3 cut(s)	489, 1101, 1667
Alw44I	GTGCAC	1 cut(s)	1749
AoxI	GGCC	5 cut(s)	741, 1262, 1521, 1632, 2000
ApaLI	GTGCAC	1 cut(s)	1749
ApeKI	GCWGC	3 cut(s)	1226, 1325, 1442
ApoI	RAATTY	3 cut(s)	152, 1658, 2029
ArsI	GACNNNNNNTTYG	2 cut(s)	1265, 1297
Asp700I	GAANNNNTTC	3 cut(s)	429, 1759, 2047
AspLEI	GCGC	2 cut(s)	382, 1083
AspS9I	GGNCC	6 cut(s)	742, 1054, 1262, 1521, 1951, 2000
AsuHPI	GGTGA	3 cut(s)	902, 1210, 1913
AsuNHI	GCTAGC	1 cut(s)	203
AvaII	GGWCC	2 cut(s)	1054, 1951
BaeGI	GKGCMC	2 cut(s)	1537, 1753
BanII	GRGCYC	3 cut(s)	219, 230, 1906
BarI	GAAGNNNNNNTAC	1 cut(s)	2032
BbsI	GAAGAC	1 cut(s)	921
Bbv12I	GWGCWC	2 cut(s)	219, 1753
BbvI	GCAGC	3 cut(s)	1238, 1312, 1429
BccI	CCATC	9 cut(s)	793, 830, 881, 988, 1033, 1195, 1344, 1369, 1684
BcgI	CGANNNNNNTGC	2 cut(s)	1838, 1872
BciT130I	CCWGG	3 cut(s)	40, 1571, 1913
BciVI	GTATCC	1 cut(s)	36
BclI	TGATCA	2 cut(s)	477, 1587
BcoDI	GTCTC	3 cut(s)	489, 1101, 1667
BcuI	ACTAGT	1 cut(s)	137
BfaI	CTAG	8 cut(s)	27, 138, 180, 204, 1031, 1329, 1424, 1977
BfmI	CTRYAG	2 cut(s)	804, 1443
BfoI	RGCGCY	1 cut(s)	1084
BfrI	CTTAAG	1 cut(s)	536
BfuI	GTATCC	1 cut(s)	36
BisI	GCNGC	4 cut(s)	980, 1227, 1326, 1443
BlsI	GCNGC	4 cut(s)	981, 1228, 1327, 1444
BmcAI	AGTACT	1 cut(s)	76
Bme1390I	CCNGG	3 cut(s)	40, 1571, 1913
Bme18I	GGWCC	2 cut(s)	1054, 1951
BmgT120I	GGNCC	6 cut(s)	742, 1054, 1262, 1521, 1951, 2000
BmiI	GGNNCC	6 cut(s)	678, 847, 1055, 1056, 1263, 1522
BmrFI	CCNGG	3 cut(s)	40, 1571, 1913
BmrI	ACTGGG	2 cut(s)	46, 928
BmsI	GCATC	4 cut(s)	395, 966, 1020, 1765
BmtI	GCTAGC	1 cut(s)	207
BmuI	ACTGGG	2 cut(s)	46, 928
BpiI	GAAGAC	1 cut(s)	921
BpmI	CTGGAG	1 cut(s)	1992
Bpu10I	CCTNAGC	2 cut(s)	1860, 2013
BpuEI	CTTGAG	2 cut(s)	776, 962
BsaI	GGTCTC	2 cut(s)	1101, 1667
BsaJI	CCNNGG	5 cut(s)	1102, 1397, 1437, 1874, 1912
BsaXI	ACNNNNNCTCC	2 cut(s)	1339, 1369
Bsc4I	CCNNNNNNNGG	6 cut(s)	55, 56, 480, 1090, 1543, 1576
Bse1I	ACTGG	2 cut(s)	52, 923
Bse3DI	GCAATG	1 cut(s)	809
BseBI	CCWGG	3 cut(s)	40, 1571, 1913
BseDI	CCNNGG	5 cut(s)	1102, 1397, 1437, 1874, 1912
BseGI	GGATG	5 cut(s)	170, 337, 470, 1003, 1803
BseLI	CCNNNNNNNGG	6 cut(s)	55, 56, 480, 1090, 1543, 1576
BseMI	GCAATG	1 cut(s)	809
BseMII	CTCAG	4 cut(s)	85, 1543, 1650, 2004
BseNI	ACTGG	2 cut(s)	52, 923
BseRI	GAGGAG	3 cut(s)	368, 556, 1414
BseSI	GKGCMC	2 cut(s)	1537, 1753
BseXI	GCAGC	3 cut(s)	1238, 1312, 1429
BseYI	CCCAGC	1 cut(s)	1049
BsgI	GTGCAG	2 cut(s)	162, 627
Bsh1236I	CGCG	1 cut(s)	515
BshFI	GGCC	5 cut(s)	743, 1264, 1523, 1634, 2002
BsiHKAI	GWGCWC	2 cut(s)	219, 1753
BslFI	GGGAC	1 cut(s)	1040
BslI	CCNNNNNNNGG	6 cut(s)	55, 56, 480, 1090, 1543, 1576
BsmAI	GTCTC	3 cut(s)	489, 1101, 1667
BsmFI	GGGAC	1 cut(s)	1040
BsmI	GAATGC	4 cut(s)	834, 1156, 1420, 1917
BsnI	GGCC	5 cut(s)	743, 1264, 1523, 1634, 2002
Bso31I	GGTCTC	2 cut(s)	1101, 1667
Bsp1286I	GDGCHC	5 cut(s)	219, 230, 1537, 1753, 1906
Bsp1407I	TGTACA	1 cut(s)	131
Bsp143I	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
BspACI	CCGC	4 cut(s)	513, 979, 982, 1929
BspANI	GGCC	5 cut(s)	743, 1264, 1523, 1634, 2002
BspCNI	CTCAG	4 cut(s)	84, 1542, 1649, 2005
BspFNI	CGCG	1 cut(s)	515
BspLI	GGNNCC	6 cut(s)	678, 847, 1055, 1056, 1263, 1522
BspMAI	CTGCAG	1 cut(s)	1447
BspOI	GCTAGC	1 cut(s)	207
BspQI	GCTCTTC	1 cut(s)	235
BspTI	CTTAAG	1 cut(s)	536
BspTNI	GGTCTC	2 cut(s)	1101, 1667
BsrDI	GCAATG	1 cut(s)	809
BsrGI	TGTACA	1 cut(s)	131
BsrI	ACTGG	2 cut(s)	52, 923
BssECI	CCNNGG	5 cut(s)	1102, 1397, 1437, 1874, 1912
BssMI	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
BssT1I	CCWWGG	2 cut(s)	1437, 1874
Bst2UI	CCWGG	3 cut(s)	40, 1571, 1913
Bst4CI	ACNGT	3 cut(s)	399, 627, 1717
Bst6I	CTCTTC	5 cut(s)	235, 420, 462, 487, 1374
BstAFI	CTTAAG	1 cut(s)	536
BstAUI	TGTACA	1 cut(s)	131
BstC8I	GCNNGC	7 cut(s)	6, 205, 378, 384, 816, 1567, 1881
BstDSI	CCRYGG	1 cut(s)	1102
BstENI	CCTNNNNNAGG	1 cut(s)	1541
BstF5I	GGATG	5 cut(s)	170, 337, 470, 1003, 1803
BstFNI	CGCG	1 cut(s)	515
BstH2I	RGCGCY	1 cut(s)	1084
BstHHI	GCGC	2 cut(s)	382, 1083
BstKTI	GATC	5 cut(s)	480, 1590, 1795, 1848, 1987
BstMAI	GTCTC	3 cut(s)	489, 1101, 1667
BstMBI	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
BstMWI	GCNNNNNNNGC	3 cut(s)	410, 815, 985
BstNI	CCWGG	3 cut(s)	40, 1571, 1913
BstNSI	RCATGY	1 cut(s)	1282
BstSCI	CCNGG	3 cut(s)	38, 1569, 1911
BstSFI	CTRYAG	2 cut(s)	804, 1443
BstSLI	GKGCMC	2 cut(s)	1537, 1753
BstUI	CGCG	1 cut(s)	515
BstV1I	GCAGC	3 cut(s)	1238, 1312, 1429
BstV2I	GAAGAC	1 cut(s)	921
BsuI	GTATCC	1 cut(s)	36
BsuRI	GGCC	5 cut(s)	743, 1264, 1523, 1634, 2002
BtgI	CCRYGG	1 cut(s)	1102
BtsCI	GGATG	5 cut(s)	170, 337, 470, 1003, 1803
BtsI	GCAGTG	2 cut(s)	615, 1774
BtsIMutI	CAGTG	5 cut(s)	615, 798, 1537, 1651, 1774
Cac8I	GCNNGC	7 cut(s)	6, 205, 378, 384, 816, 1567, 1881
CfoI	GCGC	2 cut(s)	382, 1083
Cfr13I	GGNCC	6 cut(s)	742, 1054, 1262, 1521, 1951, 2000
CseI	GACGC	1 cut(s)	670
Csp6I	GTAC	4 cut(s)	75, 132, 184, 1098
CviAII	CATG	5 cut(s)	302, 475, 1076, 1279, 1630
CviQI	GTAC	4 cut(s)	75, 132, 184, 1098
DpnI	GATC	5 cut(s)	479, 1589, 1794, 1847, 1986
DpnII	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
Eam1104I	CTCTTC	5 cut(s)	235, 420, 462, 487, 1374
EarI	CTCTTC	5 cut(s)	235, 420, 462, 487, 1374
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	2 cut(s)	1437, 1874
Eco24I	GRGCYC	3 cut(s)	219, 230, 1906
Eco31I	GGTCTC	2 cut(s)	1101, 1667
Eco47I	GGWCC	2 cut(s)	1054, 1951
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	2 cut(s)	455, 774
EcoICRI	GAGCTC	1 cut(s)	217
EcoNI	CCTNNNNNAGG	1 cut(s)	1541
EcoO109I	RGGNCCY	4 cut(s)	742, 1054, 1521, 2000
EcoRII	CCWGG	3 cut(s)	38, 1569, 1911
EcoT14I	CCWWGG	2 cut(s)	1437, 1874
EcoT22I	ATGCAT	2 cut(s)	1621, 1780
EcoT38I	GRGCYC	3 cut(s)	219, 230, 1906
ErhI	CCWWGG	2 cut(s)	1437, 1874
FaeI	CATG	5 cut(s)	305, 478, 1079, 1282, 1633
FalI	AAGNNNNNCTT	2 cut(s)	761, 793
FaqI	GGGAC	1 cut(s)	1040
FatI	CATG	5 cut(s)	301, 474, 1075, 1278, 1629
FauNDI	CATATG	3 cut(s)	1285, 1584, 1780
FbaI	TGATCA	2 cut(s)	477, 1587
FblI	GTMKAC	1 cut(s)	288
Fnu4HI	GCNGC	4 cut(s)	980, 1227, 1326, 1443
FokI	GGATG	5 cut(s)	177, 344, 457, 1010, 1810
FriOI	GRGCYC	3 cut(s)	219, 230, 1906
Fsp4HI	GCNGC	4 cut(s)	980, 1227, 1326, 1443
FspBI	CTAG	8 cut(s)	27, 138, 180, 204, 1031, 1329, 1424, 1977
GlaI	GCGC	2 cut(s)	381, 1082
GluI	GCNGC	4 cut(s)	980, 1227, 1326, 1443
GsaI	CCCAGC	1 cut(s)	1053
GsuI	CTGGAG	1 cut(s)	1992
HaeII	RGCGCY	1 cut(s)	1084
HaeIII	GGCC	5 cut(s)	743, 1264, 1523, 1634, 2002
HgaI	GACGC	1 cut(s)	670
HhaI	GCGC	2 cut(s)	382, 1083
Hin1II	CATG	5 cut(s)	305, 478, 1079, 1282, 1633
Hin6I	GCGC	2 cut(s)	380, 1081
HinP1I	GCGC	2 cut(s)	380, 1081
HindIII	AAGCTT	2 cut(s)	6, 938
HinfI	GANTC	3 cut(s)	509, 781, 1760
HphI	GGTGA	3 cut(s)	902, 1210, 1913
Hpy166II	GTNNAC	6 cut(s)	68, 289, 1649, 1751, 1871, 2009
Hpy188III	TCNNGA	6 cut(s)	27, 755, 884, 1465, 1685, 1971
Hpy8I	GTNNAC	6 cut(s)	68, 289, 1649, 1751, 1871, 2009
HpyAV	CCTTC	7 cut(s)	78, 430, 541, 662, 766, 1094, 1859
HpyCH4III	ACNGT	3 cut(s)	399, 627, 1717
HpyCH4IV	ACGT	2 cut(s)	958, 1188
HpyF10VI	GCNNNNNNNGC	3 cut(s)	410, 815, 985
HpySE526I	ACGT	2 cut(s)	958, 1188
Hsp92II	CATG	5 cut(s)	305, 478, 1079, 1282, 1633
HspAI	GCGC	2 cut(s)	380, 1081
KflI	GGGWCCC	1 cut(s)	1054
Ksp22I	TGATCA	2 cut(s)	477, 1587
Kzo9I	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
LguI	GCTCTTC	1 cut(s)	235
LmnI	GCTCC	2 cut(s)	845, 1973
Lsp1109I	GCAGC	3 cut(s)	1238, 1312, 1429
LweI	GCATC	4 cut(s)	395, 966, 1020, 1765
MaeI	CTAG	8 cut(s)	27, 138, 180, 204, 1031, 1329, 1424, 1977
MaeII	ACGT	2 cut(s)	958, 1188
MaeIII	GTNAC	3 cut(s)	793, 1720, 1828
MalI	GATC	5 cut(s)	479, 1589, 1794, 1847, 1986
MboI	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
MfeI	CAATTG	1 cut(s)	208
MhlI	GDGCHC	5 cut(s)	219, 230, 1537, 1753, 1906
MmeI	TCCRAC	2 cut(s)	1233, 1978
Mph1103I	ATGCAT	2 cut(s)	1621, 1780
MroXI	GAANNNNTTC	3 cut(s)	429, 1759, 2047
MseI	TTAA	6 cut(s)	11, 537, 591, 1007, 1392, 1662
MslI	CAYNNNNRTG	4 cut(s)	1016, 1116, 1308, 1628
MspCI	CTTAAG	1 cut(s)	536
MspR9I	CCNGG	3 cut(s)	40, 1571, 1913
MunI	CAATTG	1 cut(s)	208
Mva1269I	GAATGC	4 cut(s)	834, 1156, 1420, 1917
MvaI	CCWGG	3 cut(s)	40, 1571, 1913
MvnI	CGCG	1 cut(s)	515
MwoI	GCNNNNNNNGC	3 cut(s)	410, 815, 985
NdeI	CATATG	3 cut(s)	1285, 1584, 1780
NdeII	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
NheI	GCTAGC	1 cut(s)	203
NlaIII	CATG	5 cut(s)	305, 478, 1079, 1282, 1633
NlaIV	GGNNCC	6 cut(s)	678, 847, 1055, 1056, 1263, 1522
NmuCI	GTSAC	2 cut(s)	793, 1720
NsiI	ATGCAT	2 cut(s)	1621, 1780
NspI	RCATGY	1 cut(s)	1282
PciI	ACATGT	1 cut(s)	1278
PciSI	GCTCTTC	1 cut(s)	235
PctI	GAATGC	4 cut(s)	834, 1156, 1420, 1917
PdmI	GAANNNNTTC	3 cut(s)	429, 1759, 2047
PfeI	GAWTC	3 cut(s)	509, 781, 1760
PkrI	GCNGC	4 cut(s)	981, 1228, 1327, 1444
PpuMI	RGGWCCY	1 cut(s)	1054
PscI	ACATGT	1 cut(s)	1278
PsiI	TTATAA	2 cut(s)	689, 1116
Psp124BI	GAGCTC	1 cut(s)	219
Psp5II	RGGWCCY	1 cut(s)	1054
Psp6I	CCWGG	3 cut(s)	38, 1569, 1911
PspFI	CCCAGC	1 cut(s)	1049
PspGI	CCWGG	3 cut(s)	38, 1569, 1911
PspN4I	GGNNCC	6 cut(s)	678, 847, 1055, 1056, 1263, 1522
PspPI	GGNCC	6 cut(s)	742, 1054, 1262, 1521, 1951, 2000
PspPPI	RGGWCCY	1 cut(s)	1054
PstI	CTGCAG	1 cut(s)	1447
RsaI	GTAC	4 cut(s)	76, 133, 185, 1099
RsaNI	GTAC	4 cut(s)	75, 132, 184, 1098
RseI	CAYNNNNRTG	4 cut(s)	1016, 1116, 1308, 1628
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	1 cut(s)	235
SaqAI	TTAA	6 cut(s)	11, 537, 591, 1007, 1392, 1662
SatI	GCNGC	4 cut(s)	980, 1227, 1326, 1443
Sau3AI	GATC	5 cut(s)	477, 1587, 1792, 1845, 1984
Sau96I	GGNCC	6 cut(s)	742, 1054, 1262, 1521, 1951, 2000
ScaI	AGTACT	1 cut(s)	76
ScrFI	CCNGG	3 cut(s)	40, 1571, 1913
SduI	GDGCHC	5 cut(s)	219, 230, 1537, 1753, 1906
SfaNI	GCATC	4 cut(s)	395, 966, 1020, 1765
SfcI	CTRYAG	2 cut(s)	804, 1443
SinI	GGWCC	2 cut(s)	1054, 1951
SmiMI	CAYNNNNRTG	4 cut(s)	1016, 1116, 1308, 1628
SmlI	CTYRAG	3 cut(s)	536, 755, 941
SmoI	CTYRAG	3 cut(s)	536, 755, 941
SpeI	ACTAGT	1 cut(s)	137
SsiI	CCGC	4 cut(s)	513, 979, 982, 1929
SspI	AATATT	1 cut(s)	1813
SspMI	CTAG	8 cut(s)	27, 138, 180, 204, 1031, 1329, 1424, 1977
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	3 cut(s)	38, 1569, 1911
StyI	CCWWGG	2 cut(s)	1437, 1874
TaaI	ACNGT	3 cut(s)	399, 627, 1717
TaiI	ACGT	2 cut(s)	961, 1191
TaqI	TCGA	2 cut(s)	389, 1848
TatI	WGTACW	2 cut(s)	74, 131
TauI	GCSGC	1 cut(s)	982
TfiI	GAWTC	3 cut(s)	509, 781, 1760
Tru1I	TTAA	6 cut(s)	11, 537, 591, 1007, 1392, 1662
Tru9I	TTAA	6 cut(s)	11, 537, 591, 1007, 1392, 1662
TscAI	CASTG	5 cut(s)	615, 798, 1537, 1651, 1774
TseFI	GTSAC	2 cut(s)	793, 1720
TseI	GCWGC	3 cut(s)	1226, 1325, 1442
Tsp45I	GTSAC	2 cut(s)	793, 1720
TspDTI	ATGAA	4 cut(s)	1302, 1686, 1814, 1851
TspRI	CASTG	5 cut(s)	615, 798, 1537, 1651, 1774
Vha464I	CTTAAG	1 cut(s)	536
VneI	GTGCAC	1 cut(s)	1749
VpaK11BI	GGWCC	2 cut(s)	1054, 1951
XagI	CCTNNNNNAGG	1 cut(s)	1541
XapI	RAATTY	3 cut(s)	152, 1658, 2029
XbaI	TCTAGA	1 cut(s)	26
XceI	RCATGY	1 cut(s)	1282
XmiI	GTMKAC	1 cut(s)	288
XmnI	GAANNNNTTC	3 cut(s)	429, 1759, 2047
XspI	CTAG	8 cut(s)	27, 138, 180, 204, 1031, 1329, 1424, 1977
ZrmI	AGTACT	1 cut(s)	76
Zsp2I	ATGCAT	2 cut(s)	1621, 1780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.