Alpha-ketoglutarate-dependent dioxygenase alkB homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G20350 AT4G20350 AT4G20350 AT4G20350 AT4G20350 AT4G20350 AT4G20350 AT4G20350 AT4G20350 AT4G20350 AT4G20350 |
| fragaria_vesca | FvH4_3g46100 FvH4_3g46100 FvH4_3g46100 FvH4_3g46100 FvH4_3g46100 |
| malus_domestica | MD11G1000200.v1.1 |
| prunus_persica | Prupe.6G000300_v2.0.a1 |
| pyrus_communis | pycom11g00020 |
| rosa_chinensis | RchiOBHm_Chr5g0084171 |
| rosa_laevigata | RLG00000037089 |
| rosa_multiflora | Rmu_sc0005537.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00000460 |
| rosa_samantha | Rh5AG542300 Rh5BG568300 Rh5CG589900 Rh5DG576300 |
| rosa_wichuraiana | Rw5G050440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 80 |
| AclWI | GGATC | 1 cut(s) | 92 |
| AcsI | RAATTY | 4 cut(s) | 70, 339, 360, 400 |
| AfaI | GTAC | 3 cut(s) | 43, 219, 249 |
| AflIII | ACRYGT | 1 cut(s) | 371 |
| AgsI | TTSAA | 3 cut(s) | 21, 169, 387 |
| AluBI | AGCT | 2 cut(s) | 254, 305 |
| AluI | AGCT | 2 cut(s) | 254, 305 |
| AlwI | GGATC | 1 cut(s) | 92 |
| ApoI | RAATTY | 4 cut(s) | 70, 339, 360, 400 |
| AseI | ATTAAT | 3 cut(s) | 90, 96, 143 |
| BccI | CCATC | 2 cut(s) | 224, 293 |
| BfmI | CTRYAG | 1 cut(s) | 257 |
| BmcAI | AGTACT | 1 cut(s) | 43 |
| BmrI | ACTGGG | 1 cut(s) | 333 |
| BmsI | GCATC | 2 cut(s) | 67, 274 |
| BmuI | ACTGGG | 1 cut(s) | 333 |
| Bpu10I | CCTNAGC | 1 cut(s) | 407 |
| Bse1I | ACTGG | 1 cut(s) | 328 |
| BseGI | GGATG | 1 cut(s) | 124 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseNI | ACTGG | 1 cut(s) | 328 |
| Bsp143I | GATC | 1 cut(s) | 84 |
| BspACI | CCGC | 1 cut(s) | 80 |
| BspCNI | CTCAG | 1 cut(s) | 197 |
| BspPI | GGATC | 1 cut(s) | 92 |
| BsrI | ACTGG | 1 cut(s) | 328 |
| BssMI | GATC | 1 cut(s) | 84 |
| BstC8I | GCNNGC | 1 cut(s) | 198 |
| BstDEI | CTNAG | 2 cut(s) | 184, 407 |
| BstF5I | GGATG | 1 cut(s) | 124 |
| BstKTI | GATC | 1 cut(s) | 87 |
| BstMBI | GATC | 1 cut(s) | 84 |
| BstNSI | RCATGY | 2 cut(s) | 200, 375 |
| BstSFI | CTRYAG | 1 cut(s) | 257 |
| BtsCI | GGATG | 1 cut(s) | 124 |
| Cac8I | GCNNGC | 1 cut(s) | 198 |
| Csp6I | GTAC | 3 cut(s) | 42, 218, 248 |
| CviAII | CATG | 2 cut(s) | 197, 372 |
| CviJI | RGCY | 3 cut(s) | 236, 254, 305 |
| CviKI_1 | RGCY | 3 cut(s) | 236, 254, 305 |
| CviQI | GTAC | 3 cut(s) | 42, 218, 248 |
| DdeI | CTNAG | 2 cut(s) | 184, 407 |
| DpnI | GATC | 1 cut(s) | 86 |
| DpnII | GATC | 1 cut(s) | 84 |
| EcoRI | GAATTC | 1 cut(s) | 339 |
| FaeI | CATG | 2 cut(s) | 200, 375 |
| FaiI | YATR | 8 cut(s) | 140, 181, 198, 228, 275, 345, 373, 396 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 13, 45 |
| FatI | CATG | 2 cut(s) | 196, 371 |
| FauI | CCCGC | 1 cut(s) | 73 |
| FokI | GGATG | 1 cut(s) | 111 |
| Hin1II | CATG | 2 cut(s) | 200, 375 |
| Hpy166II | GTNNAC | 1 cut(s) | 241 |
| Hpy188I | TCNGA | 2 cut(s) | 76, 187 |
| Hpy188III | TCNNGA | 1 cut(s) | 21 |
| Hpy8I | GTNNAC | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 4 cut(s) | 36, 50, 196, 200 |
| HpyF3I | CTNAG | 2 cut(s) | 184, 407 |
| Hsp92II | CATG | 2 cut(s) | 200, 375 |
| Kzo9I | GATC | 1 cut(s) | 84 |
| LmnI | GCTCC | 1 cut(s) | 302 |
| LpnPI | CCDG | 3 cut(s) | 147, 309, 394 |
| LweI | GCATC | 2 cut(s) | 67, 274 |
| MalI | GATC | 1 cut(s) | 86 |
| MboI | GATC | 1 cut(s) | 84 |
| MluCI | AATT | 5 cut(s) | 70, 293, 339, 360, 400 |
| MnlI | CCTC | 2 cut(s) | 159, 208 |
| MseI | TTAA | 4 cut(s) | 90, 96, 143, 333 |
| MslI | CAYNNNNRTG | 2 cut(s) | 143, 370 |
| NdeII | GATC | 1 cut(s) | 84 |
| NlaIII | CATG | 2 cut(s) | 200, 375 |
| NspI | RCATGY | 2 cut(s) | 200, 375 |
| PaeI | GCATGC | 1 cut(s) | 200 |
| PciI | ACATGT | 1 cut(s) | 371 |
| PscI | ACATGT | 1 cut(s) | 371 |
| PshBI | ATTAAT | 3 cut(s) | 90, 96, 143 |
| RsaI | GTAC | 3 cut(s) | 43, 219, 249 |
| RsaNI | GTAC | 3 cut(s) | 42, 218, 248 |
| RseI | CAYNNNNRTG | 2 cut(s) | 143, 370 |
| SaqAI | TTAA | 4 cut(s) | 90, 96, 143, 333 |
| Sau3AI | GATC | 1 cut(s) | 84 |
| ScaI | AGTACT | 1 cut(s) | 43 |
| SetI | ASST | 4 cut(s) | 219, 256, 307, 413 |
| SfaNI | GCATC | 2 cut(s) | 67, 274 |
| SfcI | CTRYAG | 1 cut(s) | 257 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 143, 370 |
| SphI | GCATGC | 1 cut(s) | 200 |
| Sse9I | AATT | 5 cut(s) | 70, 293, 339, 360, 400 |
| SsiI | CCGC | 1 cut(s) | 80 |
| SspI | AATATT | 1 cut(s) | 94 |
| TaqI | TCGA | 1 cut(s) | 376 |
| TasI | AATT | 5 cut(s) | 70, 293, 339, 360, 400 |
| TatI | WGTACW | 2 cut(s) | 41, 247 |
| Tru1I | TTAA | 4 cut(s) | 90, 96, 143, 333 |
| Tru9I | TTAA | 4 cut(s) | 90, 96, 143, 333 |
| TspDTI | ATGAA | 7 cut(s) | 113, 128, 132, 332, 332, 354, 383 |
| VspI | ATTAAT | 3 cut(s) | 90, 96, 143 |
| XapI | RAATTY | 4 cut(s) | 70, 339, 360, 400 |
| XceI | RCATGY | 2 cut(s) | 200, 375 |
| ZrmI | AGTACT | 1 cut(s) | 43 |