Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0007872

Physical Location & Seq

Genomic Coordinates Forward (+)

2135617 .. 2137578

Gene Structure 1962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGTCAATTGATCCTTTGGGCTCTTCTACTCCTGTTCCCATGGAAACAGATGGAGAAGAGAGGAATTTGGTCATGTCTGATAACGGGGAATCATCCAAAACGGAAAGTTCAGAGCAGACTGTGGAGCCACCTTCTGATTCTTCAGTGGGGAATGTTGAAATATTTCTTCCTGACTGTGTGAGCAATGTTGCTCGTCTTCTTGAAACAATACTTCAGAATGGTGACACATGTCGTATATTTGTGGAGAAGAAGGGGGTTGAAGCTGTCCTGCAGTTATTTACCTTGCCCTTGATGCCTCCTTCTGTTTCAGTTGGCCAGAGTATTTCTGTCGCATTTAAGAACTTCTCACCACAACATTCTGCTTCTTTGGCTGGGGCAGTATGTTCATTCTTGAGAGAGCATCTGAAATCAACAAATGAACTTTTAGTTTCAGTTGGAGGGACTCAACTTGCTTTGGTGGAATCTGCGAAGCAAACTCAAGTTTTGAGACATCTTTCCAGTCTTGAAGCTATTCTGTCTCTGTCTAATGTTCTGTTGAAAGGGACAACTACTGTGGTGTCTGAACTGGGTGCAGCAGATGCTGATGTATTGAAAGATCTCGGGAGCACCTACCGGGAAATAATTTGGCAAATCTCTCTGTGCAATGATGTCAAGTCAGATGAGAAGACCAATGCTGAACAAGAACCAGAGATTGCTGAGGCAGCTCCGACTAATGCTTCTGGAAGGGAGAGTGATGATGATGCTAATATTCCAATGGTGAGATATATGAACCCAGTTTCTATCAGGAATCAGCCCTTGTGGGGTGGAGAACGCGAGTTTCTGTCAGTTGTTCGCTCTGGTGAAGGTTTGCACCGTCGTAGTCGTCATGGTTTTACACGCATAAGGGGTGGAAGGACAGGCCGGCATTTGGAGGCTTTAAATGTTGATTCTGAATCTTCCTCAACAGTATCAGAAACATCTACTTCCCAAGATTTGAAAAAGAAAAGTCCTGATGTTCTTGTGATAGAAATCCTCAACAAGCTGGCTTCCACACTGCGTTCCTTCTTCACAGCTCTTGTCAAGGGATTCACATCACCAAATCGGCGTAGAGTTGACTCTGGGTCGTTGAGTTTGGTTTCCAAGACTCTTGGAACTGCCCTAGCTAAAATATTTCTCGAGTCTCTTAGCTTCTCTGGGCATTCTACATCAACTGGGCTCGATACATCACTGTCAGTCAAGTGTCGATATCTTGGCAAAGTTGTCGATGATATGGTATCGCTTACATTTGACAGCAGGCGACGTACTTGTTATACTGCAACAGTAAATAATTTCTATGTCCATGGTACTTTTAAGGAGCTGCTTACAACATTTGAAGCTACTAGTCAGTTGTTGTGGACACTACCATACTCCGTGTCAACGTCAGGTATTGATCCTGAAAGGACAGGTGAAGGAAGTAAACTGTCCCACAGTTCGTGGCTGCTTGATACTTTACAGAGCTATTGCCGTGTGCTCGAGTATTTTGTTAATTCTTCTTTACTCTTATCCACAACCTCTGCTTCTCAAGCACAGTTGCTTGTTCAGCAGCCAGTTGCAGTTGGTTTGTCAATTGGGCTTTTCCCTGTGCCAAGGGACCCAGAAGTTTTTATTCGTATGCTGCAGTCTCAAGTTCTTGATGTGATACTTCCTGTCTGGAACCACCCTATGTTTCCAAATTGTAGTCCGGATTTCATTGCTTCTATTGTCTCGCTTGTCATGCATGTATATTCTGGTGTTGGAGATGTGAAGCAGAATCGCAGTGGCATTGCTGGAAGTACAAACCAGCGATTGACCCCACCACTTGATGAAAATACTATTACCACCATTGTTGAGATGGGTTTTCCAAGGGCTAGGGCAGAGGAAGCTCTTAGGCGGGTGGAAACAAATAGCGTTGAAATGGCCATGGAGTGGCTCTTTAGTCATCCTGAGCGATCCTGTGCAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0005911 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030054 GO:0032446 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

DUF4414 DUF908 DUF913 HECT UBA

Protein Analysis

654

Amino Acids

71.22

Weight (kDa)

5.42

Isoelectric Point (pI)

46.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF913	PF06025	10 - 100	8e-12	Domain of Unknown Function (DUF913)
UBA_7	PF22562	607 - 648	1.2e-13	UBA-like domain
UBA	PF00627	607 - 643	3.5e-08	UBA/TS-N domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55860 AT1G70320
fragaria_vesca	FvH4_3g42950 FvH4_3g42950 FvH4_3g42950 FvH4_3g42950
malus_domestica	MD03G1027100.v1.1 MD11G1031000.v1.1
prunus_persica	Prupe.6G024400_v2.0.a1 Prupe.6G024400_v2.0.a1
pyrus_communis	pycom03g02210 pycom11g02630
rosa_chinensis	RchiOBHm_Chr5g0077001
rosa_laevigata	RLG00000036641
rosa_multiflora	Rmu_sc0003323.1_g000004
rosa_roxburghii	Rroxscaffold_1G00005140
rosa_rugosa	Rorug05G0450000 Rorug05G0450000 Rorug05G0450100
rosa_samantha	Rh5AG504800 Rh5BG526500 Rh5CG550300 Rh5DG538700
rosa_wichuraiana	Rw5G047160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1923
AccII	CGCG	1 cut(s)	813
AccIII	TCCGGA	1 cut(s)	1699
AciI	CCGC	1 cut(s)	1888
AclWI	GGATC	3 cut(s)	5, 1403, 1941
AcoI	YGGCCR	2 cut(s)	313, 1914
AcsI	RAATTY	1 cut(s)	64
AcuI	CTGAAG	2 cut(s)	126, 197
AfaI	GTAC	3 cut(s)	1282, 1324, 1792
AfiI	CCNNNNNNNGG	3 cut(s)	800, 907, 1923
AflIII	ACRYGT	1 cut(s)	227
AgsI	TTSAA	9 cut(s)	158, 203, 260, 506, 538, 592, 976, 1352, 1910
AhdI	GACNNNNNGTC	1 cut(s)	1099
AhlI	ACTAGT	1 cut(s)	1358
Alw21I	GWGCWC	2 cut(s)	608, 1491
Alw26I	GTCTC	5 cut(s)	481, 522, 1164, 1644, 1726
AlwI	GGATC	3 cut(s)	5, 1403, 1941
AlwNI	CAGNNNCTG	1 cut(s)	581
Ama87I	CYCGRG	3 cut(s)	599, 1154, 1490
Aor13HI	TCCGGA	1 cut(s)	1699
AoxI	GGCC	3 cut(s)	313, 898, 1914
ApeKI	GCWGC	6 cut(s)	572, 701, 1336, 1456, 1561, 1633
ApoI	RAATTY	1 cut(s)	64
Asp700I	GAANNNNTTC	2 cut(s)	162, 510
AspS9I	GGNCC	1 cut(s)	1609
AsuC2I	CCSGG	1 cut(s)	614
AsuHPI	GGTGA	6 cut(s)	233, 339, 769, 851, 1065, 1436
AvaI	CYCGRG	3 cut(s)	599, 1154, 1490
AvaII	GGWCC	1 cut(s)	1609
BalI	TGGCCA	2 cut(s)	315, 1916
BanII	GRGCYC	2 cut(s)	23, 1197
BbsI	GAAGAC	2 cut(s)	188, 671
Bbv12I	GWGCWC	2 cut(s)	608, 1491
BbvCI	CCTCAGC	1 cut(s)	696
BbvI	GCAGC	6 cut(s)	584, 713, 1323, 1443, 1573, 1620
BccI	CCATC	2 cut(s)	44, 1843
BceAI	ACGGC	1 cut(s)	1467
BcgI	CGANNNNNNTGC	2 cut(s)	1222, 1256
BcnI	CCSGG	1 cut(s)	614
BcoDI	GTCTC	5 cut(s)	481, 522, 1164, 1644, 1726
BcuI	ACTAGT	1 cut(s)	1358
BfaI	CTAG	3 cut(s)	1139, 1359, 1866
BfmI	CTRYAG	2 cut(s)	269, 1634
BglII	AGATCT	1 cut(s)	595
BisI	GCNGC	6 cut(s)	573, 702, 1337, 1457, 1562, 1634
BlsI	GCNGC	6 cut(s)	574, 703, 1338, 1458, 1563, 1635
Bme1390I	CCNGG	1 cut(s)	614
Bme18I	GGWCC	1 cut(s)	1609
BmeRI	GACNNNNNGTC	1 cut(s)	1099
BmeT110I	CYCGRG	3 cut(s)	599, 1154, 1490
BmgT120I	GGNCC	1 cut(s)	1609
BmiI	GGNNCC	4 cut(s)	126, 1610, 1611, 1673
BmrFI	CCNGG	1 cut(s)	614
BmrI	ACTGGG	3 cut(s)	575, 767, 1200
BmsI	GCATC	4 cut(s)	282, 409, 568, 730
BmuI	ACTGGG	3 cut(s)	575, 767, 1200
BoxI	GACNNNNGTC	1 cut(s)	228
BpiI	GAAGAC	2 cut(s)	188, 671
Bpu10I	CCTNAGC	2 cut(s)	696, 1941
BpuEI	CTTGAG	4 cut(s)	412, 462, 1524, 1626
BpuMI	CCSGG	1 cut(s)	614
BsaBI	GATNNNNATC	2 cut(s)	1007, 1069
BsaJI	CCNNGG	5 cut(s)	39, 1318, 1604, 1859, 1917
BsaWI	WCCGGW	1 cut(s)	1699
Bsc4I	CCNNNNNNNGG	3 cut(s)	800, 907, 1923
Bse118I	RCCGGY	1 cut(s)	900
Bse1I	ACTGG	5 cut(s)	498, 570, 773, 1195, 1565
Bse3DI	GCAATG	4 cut(s)	190, 649, 1707, 1779
Bse8I	GATNNNNATC	2 cut(s)	1007, 1069
BseAI	TCCGGA	1 cut(s)	1699
BseDI	CCNNGG	5 cut(s)	39, 1318, 1604, 1859, 1917
BseGI	GGATG	2 cut(s)	92, 1936
BseJI	GATNNNNATC	2 cut(s)	1007, 1069
BseLI	CCNNNNNNNGG	3 cut(s)	800, 907, 1923
BseMI	GCAATG	4 cut(s)	190, 649, 1707, 1779
BseMII	CTCAG	2 cut(s)	687, 1932
BseNI	ACTGG	5 cut(s)	498, 570, 773, 1195, 1565
BseXI	GCAGC	6 cut(s)	584, 713, 1323, 1443, 1573, 1620
BseYI	CCCAGC	1 cut(s)	371
BsgI	GTGCAG	1 cut(s)	591
Bsh1236I	CGCG	1 cut(s)	813
BshFI	GGCC	3 cut(s)	315, 900, 1916
BsiHKAI	GWGCWC	2 cut(s)	608, 1491
BsiHKCI	CYCGRG	3 cut(s)	599, 1154, 1490
BsiSI	CCGG	3 cut(s)	613, 901, 1700
BslFI	GGGAC	4 cut(s)	454, 556, 1426, 1622
BslI	CCNNNNNNNGG	3 cut(s)	800, 907, 1923
BsmAI	GTCTC	5 cut(s)	481, 522, 1164, 1644, 1726
BsmFI	GGGAC	4 cut(s)	454, 556, 1426, 1622
BsmI	GAATGC	1 cut(s)	1177
BsnI	GGCC	3 cut(s)	315, 900, 1916
BsoBI	CYCGRG	3 cut(s)	599, 1154, 1490
Bsp1286I	GDGCHC	4 cut(s)	23, 608, 1197, 1491
Bsp13I	TCCGGA	1 cut(s)	1699
Bsp143I	GATC	4 cut(s)	10, 595, 1408, 1946
Bsp19I	CCATGG	3 cut(s)	39, 1318, 1917
BspACI	CCGC	1 cut(s)	1888
BspANI	GGCC	3 cut(s)	315, 900, 1916
BspCNI	CTCAG	2 cut(s)	688, 1933
BspEI	TCCGGA	1 cut(s)	1699
BspFNI	CGCG	1 cut(s)	813
BspLI	GGNNCC	4 cut(s)	126, 1610, 1611, 1673
BspMAI	CTGCAG	2 cut(s)	273, 1638
BspPI	GGATC	3 cut(s)	5, 1403, 1941
BspQI	GCTCTTC	1 cut(s)	28
BsrDI	GCAATG	4 cut(s)	190, 649, 1707, 1779
BsrFI	RCCGGY	1 cut(s)	900
BsrI	ACTGG	5 cut(s)	498, 570, 773, 1195, 1565
BssAI	RCCGGY	1 cut(s)	900
BssECI	CCNNGG	5 cut(s)	39, 1318, 1604, 1859, 1917
BssMI	GATC	4 cut(s)	10, 595, 1408, 1946
BssT1I	CCWWGG	5 cut(s)	39, 1318, 1604, 1859, 1917
Bst6I	CTCTTC	2 cut(s)	28, 51
BstAPI	GCANNNNNTGC	1 cut(s)	578
BstC8I	GCNNGC	3 cut(s)	902, 1023, 1274
BstDEI	CTNAG	4 cut(s)	696, 1163, 1883, 1941
BstDSI	CCRYGG	3 cut(s)	39, 1318, 1917
BstF5I	GGATG	2 cut(s)	92, 1936
BstFNI	CGCG	1 cut(s)	813
BstKTI	GATC	4 cut(s)	13, 598, 1411, 1949
BstMAI	GTCTC	5 cut(s)	481, 522, 1164, 1644, 1726
BstMBI	GATC	4 cut(s)	10, 595, 1408, 1946
BstMWI	GCNNNNNNNGC	8 cut(s)	292, 368, 578, 701, 1541, 1558, 1732, 1877
BstNSI	RCATGY	2 cut(s)	231, 1739
BstPAI	GACNNNNGTC	1 cut(s)	228
BstSCI	CCNGG	1 cut(s)	612
BstSFI	CTRYAG	2 cut(s)	269, 1634
BstUI	CGCG	1 cut(s)	813
BstV1I	GCAGC	6 cut(s)	584, 713, 1323, 1443, 1573, 1620
BstV2I	GAAGAC	2 cut(s)	188, 671
BstX2I	RGATCY	1 cut(s)	595
BstYI	RGATCY	1 cut(s)	595
BsuRI	GGCC	3 cut(s)	315, 900, 1916
BtgI	CCRYGG	3 cut(s)	39, 1318, 1917
BtsCI	GGATG	2 cut(s)	92, 1936
BtsI	GCAGTG	2 cut(s)	1031, 1780
BtsIMutI	CAGTG	4 cut(s)	150, 1031, 1205, 1780
Cac8I	GCNNGC	3 cut(s)	902, 1023, 1274
CaiI	CAGNNNCTG	1 cut(s)	581
Cfr10I	RCCGGY	1 cut(s)	900
Cfr13I	GGNCC	1 cut(s)	1609
Csp6I	GTAC	3 cut(s)	1281, 1323, 1791
CspCI	CAANNNNNGTGG	4 cut(s)	534, 569, 1825, 1860
CviAII	CATG	8 cut(s)	40, 73, 228, 866, 1319, 1732, 1736, 1918
CviQI	GTAC	3 cut(s)	1281, 1323, 1791
DdeI	CTNAG	4 cut(s)	696, 1163, 1883, 1941
DpnI	GATC	4 cut(s)	12, 597, 1410, 1948
DpnII	GATC	4 cut(s)	10, 595, 1408, 1946
DraI	TTTAAA	1 cut(s)	918
DriI	GACNNNNNGTC	1 cut(s)	1099
EaeI	YGGCCR	2 cut(s)	313, 1914
Eam1104I	CTCTTC	2 cut(s)	28, 51
Eam1105I	GACNNNNNGTC	1 cut(s)	1099
EarI	CTCTTC	2 cut(s)	28, 51
Eco130I	CCWWGG	5 cut(s)	39, 1318, 1604, 1859, 1917
Eco24I	GRGCYC	2 cut(s)	23, 1197
Eco32I	GATATC	1 cut(s)	1226
Eco47I	GGWCC	1 cut(s)	1609
Eco57I	CTGAAG	2 cut(s)	126, 197
Eco88I	CYCGRG	3 cut(s)	599, 1154, 1490
EcoO109I	RGGNCCY	1 cut(s)	1609
EcoRV	GATATC	1 cut(s)	1226
EcoT14I	CCWWGG	5 cut(s)	39, 1318, 1604, 1859, 1917
EcoT22I	ATGCAT	1 cut(s)	1737
EcoT38I	GRGCYC	2 cut(s)	23, 1197
ErhI	CCWWGG	5 cut(s)	39, 1318, 1604, 1859, 1917
FaeI	CATG	8 cut(s)	43, 76, 231, 869, 1322, 1735, 1739, 1921
FaqI	GGGAC	4 cut(s)	454, 556, 1426, 1622
FatI	CATG	8 cut(s)	39, 72, 227, 865, 1318, 1731, 1735, 1917
FauI	CCCGC	1 cut(s)	1881
Fnu4HI	GCNGC	6 cut(s)	573, 702, 1337, 1457, 1562, 1634
FokI	GGATG	2 cut(s)	79, 1923
FriOI	GRGCYC	2 cut(s)	23, 1197
Fsp4HI	GCNGC	6 cut(s)	573, 702, 1337, 1457, 1562, 1634
FspBI	CTAG	3 cut(s)	1139, 1359, 1866
GluI	GCNGC	6 cut(s)	573, 702, 1337, 1457, 1562, 1634
GsaI	CCCAGC	1 cut(s)	375
HaeIII	GGCC	3 cut(s)	315, 900, 1916
HapII	CCGG	3 cut(s)	613, 901, 1700
Hin1II	CATG	8 cut(s)	43, 76, 231, 869, 1322, 1735, 1739, 1921
HincII	GTYRAC	2 cut(s)	1093, 1395
HindII	GTYRAC	2 cut(s)	1093, 1395
HpaII	CCGG	3 cut(s)	613, 901, 1700
HphI	GGTGA	6 cut(s)	233, 339, 769, 851, 1065, 1436
Hpy166II	GTNNAC	4 cut(s)	1093, 1374, 1395, 1436
Hpy8I	GTNNAC	4 cut(s)	1093, 1374, 1395, 1436
Hpy99I	CGWCG	2 cut(s)	858, 1281
HpyAV	CCTTC	8 cut(s)	141, 244, 309, 717, 836, 885, 1051, 1421
HpyCH4IV	ACGT	2 cut(s)	1279, 1397
HpyCH4V	TGCA	9 cut(s)	271, 572, 642, 850, 1295, 1571, 1636, 1735, 1955
HpyF10VI	GCNNNNNNNGC	8 cut(s)	292, 368, 578, 701, 1541, 1558, 1732, 1877
HpyF3I	CTNAG	4 cut(s)	696, 1163, 1883, 1941
HpySE526I	ACGT	2 cut(s)	1279, 1397
Hsp92II	CATG	8 cut(s)	43, 76, 231, 869, 1322, 1735, 1739, 1921
KflI	GGGWCCC	1 cut(s)	1609
Kpn2I	TCCGGA	1 cut(s)	1699
KroI	GCCGGC	1 cut(s)	900
KroNI	GCCGGC	1 cut(s)	902
Kzo9I	GATC	4 cut(s)	10, 595, 1408, 1946
LguI	GCTCTTC	1 cut(s)	28
LmnI	GCTCC	4 cut(s)	124, 603, 709, 1333
Lsp1109I	GCAGC	6 cut(s)	584, 713, 1323, 1443, 1573, 1620
LweI	GCATC	4 cut(s)	282, 409, 568, 730
MaeI	CTAG	3 cut(s)	1139, 1359, 1866
MaeII	ACGT	2 cut(s)	1279, 1397
MaeIII	GTNAC	1 cut(s)	221
MalI	GATC	4 cut(s)	12, 597, 1410, 1948
MboI	GATC	4 cut(s)	10, 595, 1408, 1946
MfeI	CAATTG	2 cut(s)	6, 1584
MflI	RGATCY	1 cut(s)	595
MhlI	GDGCHC	4 cut(s)	23, 608, 1197, 1491
MlsI	TGGCCA	2 cut(s)	315, 1916
MluCI	AATT	7 cut(s)	6, 64, 621, 1306, 1504, 1584, 1690
MluNI	TGGCCA	2 cut(s)	315, 1916
MlyI	GAGTC	4 cut(s)	436, 1088, 1117, 1166
MmeI	TCCRAC	3 cut(s)	415, 731, 1732
MnlI	CCTC	9 cut(s)	54, 306, 431, 691, 904, 949, 1022, 1540, 1867
Mox20I	TGGCCA	2 cut(s)	315, 1916
Mph1103I	ATGCAT	1 cut(s)	1737
MroI	TCCGGA	1 cut(s)	1699
MroNI	GCCGGC	1 cut(s)	900
MroXI	GAANNNNTTC	2 cut(s)	162, 510
MscI	TGGCCA	2 cut(s)	315, 1916
MseI	TTAA	4 cut(s)	336, 917, 1329, 1503
Msp20I	TGGCCA	2 cut(s)	315, 1916
MspI	CCGG	3 cut(s)	613, 901, 1700
MspR9I	CCNGG	1 cut(s)	614
MunI	CAATTG	2 cut(s)	6, 1584
Mva1269I	GAATGC	1 cut(s)	1177
MvnI	CGCG	1 cut(s)	813
MwoI	GCNNNNNNNGC	8 cut(s)	292, 368, 578, 701, 1541, 1558, 1732, 1877
NaeI	GCCGGC	1 cut(s)	902
NciI	CCSGG	1 cut(s)	614
NcoI	CCATGG	3 cut(s)	39, 1318, 1917
NdeII	GATC	4 cut(s)	10, 595, 1408, 1946
NgoMIV	GCCGGC	1 cut(s)	900
NlaIII	CATG	8 cut(s)	43, 76, 231, 869, 1322, 1735, 1739, 1921
NlaIV	GGNNCC	4 cut(s)	126, 1610, 1611, 1673
NmuCI	GTSAC	1 cut(s)	221
NsiI	ATGCAT	1 cut(s)	1737
NspI	RCATGY	2 cut(s)	231, 1739
PaeR7I	CTCGAG	2 cut(s)	1154, 1490
PciI	ACATGT	1 cut(s)	227
PciSI	GCTCTTC	1 cut(s)	28
PctI	GAATGC	1 cut(s)	1177
PdiI	GCCGGC	1 cut(s)	902
PdmI	GAANNNNTTC	2 cut(s)	162, 510
PfeI	GAWTC	8 cut(s)	89, 137, 461, 787, 926, 932, 1065, 1768
PflMI	CCANNNNNTGG	1 cut(s)	1923
PkrI	GCNGC	6 cut(s)	574, 703, 1338, 1458, 1563, 1635
PleI	GAGTC	4 cut(s)	436, 1088, 1117, 1165
PpsI	GAGTC	4 cut(s)	436, 1088, 1117, 1165
PpuMI	RGGWCCY	1 cut(s)	1609
PscI	ACATGT	1 cut(s)	227
PshAI	GACNNNNGTC	1 cut(s)	228
Psp5II	RGGWCCY	1 cut(s)	1609
PspFI	CCCAGC	1 cut(s)	371
PspN4I	GGNNCC	4 cut(s)	126, 1610, 1611, 1673
PspPI	GGNCC	1 cut(s)	1609
PspPPI	RGGWCCY	1 cut(s)	1609
PspXI	VCTCGAGB	1 cut(s)	1490
PstI	CTGCAG	2 cut(s)	273, 1638
PstNI	CAGNNNCTG	1 cut(s)	581
PsuI	RGATCY	1 cut(s)	595
RsaI	GTAC	3 cut(s)	1282, 1324, 1792
RsaNI	GTAC	3 cut(s)	1281, 1323, 1791
SapI	GCTCTTC	1 cut(s)	28
SaqAI	TTAA	4 cut(s)	336, 917, 1329, 1503
SatI	GCNGC	6 cut(s)	573, 702, 1337, 1457, 1562, 1634
Sau3AI	GATC	4 cut(s)	10, 595, 1408, 1946
Sau96I	GGNCC	1 cut(s)	1609
SchI	GAGTC	4 cut(s)	436, 1088, 1117, 1166
ScrFI	CCNGG	1 cut(s)	614
SduI	GDGCHC	4 cut(s)	23, 608, 1197, 1491
SfaNI	GCATC	4 cut(s)	282, 409, 568, 730
SfcI	CTRYAG	2 cut(s)	269, 1634
Sfr274I	CTCGAG	2 cut(s)	1154, 1490
SinI	GGWCC	1 cut(s)	1609
SlaI	CTCGAG	2 cut(s)	1154, 1490
SmlI	CTYRAG	6 cut(s)	391, 477, 1154, 1490, 1539, 1641
SmoI	CTYRAG	6 cut(s)	391, 477, 1154, 1490, 1539, 1641
SpeI	ACTAGT	1 cut(s)	1358
Sse9I	AATT	7 cut(s)	6, 64, 621, 1306, 1504, 1584, 1690
SsiI	CCGC	1 cut(s)	1888
SspI	AATATT	3 cut(s)	162, 748, 1149
SspMI	CTAG	3 cut(s)	1139, 1359, 1866
StyD4I	CCNGG	1 cut(s)	612
StyI	CCWWGG	5 cut(s)	39, 1318, 1604, 1859, 1917
TaiI	ACGT	2 cut(s)	1282, 1400
TaqI	TCGA	5 cut(s)	1155, 1197, 1222, 1242, 1491
TasI	AATT	7 cut(s)	6, 64, 621, 1306, 1504, 1584, 1690
TatI	WGTACW	1 cut(s)	1790
TfiI	GAWTC	8 cut(s)	89, 137, 461, 787, 926, 932, 1065, 1768
Tru1I	TTAA	4 cut(s)	336, 917, 1329, 1503
Tru9I	TTAA	4 cut(s)	336, 917, 1329, 1503
TscAI	CASTG	4 cut(s)	150, 1038, 1212, 1780
TseFI	GTSAC	1 cut(s)	221
TseI	GCWGC	6 cut(s)	572, 701, 1336, 1456, 1561, 1633
Tsp45I	GTSAC	1 cut(s)	221
TspDTI	ATGAA	5 cut(s)	375, 432, 782, 1696, 1836
TspGWI	ACGGA	2 cut(s)	116, 1378
TspRI	CASTG	4 cut(s)	150, 1038, 1212, 1780
Van91I	CCANNNNNTGG	1 cut(s)	1923
VpaK11BI	GGWCC	1 cut(s)	1609
XapI	RAATTY	1 cut(s)	64
XceI	RCATGY	2 cut(s)	231, 1739
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1846
XhoI	CTCGAG	2 cut(s)	1154, 1490
XmnI	GAANNNNTTC	2 cut(s)	162, 510
XspI	CTAG	3 cut(s)	1139, 1359, 1866
Zsp2I	ATGCAT	1 cut(s)	1737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.