Peptidyl-prolyl cis-trans isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26555 AT4G26555 AT4G26555 |
| fragaria_vesca | FvH4_3g42230 FvH4_3g42230 FvH4_3g42230 FvH4_3g42230 |
| malus_domestica | MD03G1036700.v1.1 |
| prunus_persica | Prupe.6G028700_v2.0.a1 Prupe.6G028700_v2.0.a1 |
| pyrus_communis | pycom03g02810 pycom11g03110 |
| rosa_chinensis | RchiOBHm_Chr5g0075491 RchiOBHm_Chr5g0075521 RchiOBHm_Chr5g0075531 |
| rosa_laevigata | RLG00000036573 |
| rosa_multiflora | Rmu_co8432907.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00006020 |
| rosa_rugosa | Rorug05G0440000 Rorug05G0440000 |
| rosa_samantha | Rh5AG497100 Rh5AG497400 Rh5BG518300 Rh5CG541900 Rh5DG530800 |
| rosa_wichuraiana | Rw5G046110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 312, 635, 668 |
| AccB1I | GGYRCC | 2 cut(s) | 206, 1534 |
| AciI | CCGC | 1 cut(s) | 1532 |
| AclWI | GGATC | 2 cut(s) | 468, 481 |
| AcoI | YGGCCR | 1 cut(s) | 1422 |
| AfaI | GTAC | 4 cut(s) | 232, 510, 663, 1148 |
| AflIII | ACRYGT | 2 cut(s) | 227, 575 |
| AjnI | CCWGG | 2 cut(s) | 497, 1424 |
| AluBI | AGCT | 4 cut(s) | 570, 1274, 1331, 1357 |
| AluI | AGCT | 4 cut(s) | 570, 1274, 1331, 1357 |
| AlwI | GGATC | 2 cut(s) | 468, 481 |
| Ama87I | CYCGRG | 1 cut(s) | 486 |
| AoxI | GGCC | 3 cut(s) | 490, 1220, 1422 |
| ApeKI | GCWGC | 1 cut(s) | 567 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1052, 1084, 1196, 1228 |
| AseI | ATTAAT | 2 cut(s) | 929, 1013 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1443, 1566 |
| AspS9I | GGNCC | 3 cut(s) | 1212, 1221, 1428 |
| AsuHPI | GGTGA | 2 cut(s) | 62, 1443 |
| AsuII | TTCGAA | 1 cut(s) | 359 |
| AvaI | CYCGRG | 1 cut(s) | 486 |
| AvaII | GGWCC | 2 cut(s) | 1212, 1428 |
| BalI | TGGCCA | 1 cut(s) | 1424 |
| BamHI | GGATCC | 1 cut(s) | 473 |
| BanI | GGYRCC | 2 cut(s) | 206, 1534 |
| BanII | GRGCYC | 1 cut(s) | 1560 |
| BbvI | GCAGC | 1 cut(s) | 579 |
| BccI | CCATC | 2 cut(s) | 463, 539 |
| BciT130I | CCWGG | 2 cut(s) | 499, 1426 |
| BfaI | CTAG | 1 cut(s) | 1514 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1477 |
| BglII | AGATCT | 1 cut(s) | 976 |
| BisI | GCNGC | 2 cut(s) | 568, 1533 |
| BlsI | GCNGC | 2 cut(s) | 569, 1534 |
| BmcAI | AGTACT | 2 cut(s) | 663, 1148 |
| Bme1390I | CCNGG | 2 cut(s) | 499, 1426 |
| Bme18I | GGWCC | 2 cut(s) | 1212, 1428 |
| BmeT110I | CYCGRG | 1 cut(s) | 486 |
| BmgT120I | GGNCC | 3 cut(s) | 1212, 1221, 1428 |
| BmiI | GGNNCC | 5 cut(s) | 208, 475, 1200, 1223, 1536 |
| BmrFI | CCNGG | 2 cut(s) | 499, 1426 |
| BmrI | ACTGGG | 1 cut(s) | 1502 |
| BmsI | GCATC | 1 cut(s) | 532 |
| BmuI | ACTGGG | 1 cut(s) | 1502 |
| BpmI | CTGGAG | 1 cut(s) | 1337 |
| Bpu14I | TTCGAA | 1 cut(s) | 359 |
| BpuEI | CTTGAG | 2 cut(s) | 349, 1254 |
| BsaJI | CCNNGG | 1 cut(s) | 497 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1341, 1371 |
| Bse118I | RCCGGY | 1 cut(s) | 183 |
| Bse1I | ACTGG | 3 cut(s) | 80, 540, 1508 |
| Bse3DI | GCAATG | 2 cut(s) | 1337, 1466 |
| BseBI | CCWGG | 2 cut(s) | 499, 1426 |
| BseDI | CCNNGG | 1 cut(s) | 497 |
| BseGI | GGATG | 1 cut(s) | 523 |
| BseMI | GCAATG | 2 cut(s) | 1337, 1466 |
| BseMII | CTCAG | 2 cut(s) | 177, 1257 |
| BseNI | ACTGG | 3 cut(s) | 80, 540, 1508 |
| BseRI | GAGGAG | 1 cut(s) | 1349 |
| BseXI | GCAGC | 1 cut(s) | 579 |
| BshFI | GGCC | 3 cut(s) | 492, 1222, 1424 |
| BshNI | GGYRCC | 2 cut(s) | 206, 1534 |
| BsiHKCI | CYCGRG | 1 cut(s) | 486 |
| BsiSI | CCGG | 2 cut(s) | 184, 1457 |
| BsnI | GGCC | 3 cut(s) | 492, 1222, 1424 |
| BsoBI | CYCGRG | 1 cut(s) | 486 |
| Bsp119I | TTCGAA | 1 cut(s) | 359 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1560 |
| Bsp1407I | TGTACA | 1 cut(s) | 230 |
| Bsp143I | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| BspACI | CCGC | 1 cut(s) | 1532 |
| BspANI | GGCC | 3 cut(s) | 492, 1222, 1424 |
| BspCNI | CTCAG | 2 cut(s) | 176, 1256 |
| BspLI | GGNNCC | 5 cut(s) | 208, 475, 1200, 1223, 1536 |
| BspPI | GGATC | 2 cut(s) | 468, 481 |
| BspQI | GCTCTTC | 1 cut(s) | 441 |
| BspT104I | TTCGAA | 1 cut(s) | 359 |
| BspT107I | GGYRCC | 2 cut(s) | 206, 1534 |
| BsrDI | GCAATG | 2 cut(s) | 1337, 1466 |
| BsrFI | RCCGGY | 1 cut(s) | 183 |
| BsrGI | TGTACA | 1 cut(s) | 230 |
| BsrI | ACTGG | 3 cut(s) | 80, 540, 1508 |
| BssAI | RCCGGY | 1 cut(s) | 183 |
| BssECI | CCNNGG | 1 cut(s) | 497 |
| BssMI | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| Bst2UI | CCWGG | 2 cut(s) | 499, 1426 |
| Bst4CI | ACNGT | 2 cut(s) | 435, 1212 |
| Bst6I | CTCTTC | 1 cut(s) | 441 |
| BstAUI | TGTACA | 1 cut(s) | 230 |
| BstBI | TTCGAA | 1 cut(s) | 359 |
| BstC8I | GCNNGC | 2 cut(s) | 494, 565 |
| BstDEI | CTNAG | 3 cut(s) | 163, 1063, 1243 |
| BstF5I | GGATG | 1 cut(s) | 523 |
| BstKTI | GATC | 4 cut(s) | 476, 979, 1024, 1405 |
| BstMBI | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1477, 1486 |
| BstNI | CCWGG | 2 cut(s) | 499, 1426 |
| BstNSI | RCATGY | 2 cut(s) | 231, 579 |
| BstSCI | CCNGG | 2 cut(s) | 497, 1424 |
| BstV1I | GCAGC | 1 cut(s) | 579 |
| BstX2I | RGATCY | 2 cut(s) | 473, 976 |
| BstYI | RGATCY | 2 cut(s) | 473, 976 |
| BsuRI | GGCC | 3 cut(s) | 492, 1222, 1424 |
| BtsCI | GGATG | 1 cut(s) | 523 |
| BtsIMutI | CAGTG | 2 cut(s) | 73, 431 |
| Cac8I | GCNNGC | 2 cut(s) | 494, 565 |
| Cfr10I | RCCGGY | 1 cut(s) | 183 |
| Cfr13I | GGNCC | 3 cut(s) | 1212, 1221, 1428 |
| Csp6I | GTAC | 4 cut(s) | 231, 509, 662, 1147 |
| CviAII | CATG | 5 cut(s) | 228, 576, 1436, 1495, 1628 |
| CviQI | GTAC | 4 cut(s) | 231, 509, 662, 1147 |
| DdeI | CTNAG | 3 cut(s) | 163, 1063, 1243 |
| DpnI | GATC | 4 cut(s) | 475, 978, 1023, 1404 |
| DpnII | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| DraI | TTTAAA | 2 cut(s) | 1087, 1153 |
| EaeI | YGGCCR | 1 cut(s) | 1422 |
| Eam1104I | CTCTTC | 1 cut(s) | 441 |
| EarI | CTCTTC | 1 cut(s) | 441 |
| Eco147I | AGGCCT | 1 cut(s) | 492 |
| Eco24I | GRGCYC | 1 cut(s) | 1560 |
| Eco47I | GGWCC | 2 cut(s) | 1212, 1428 |
| Eco88I | CYCGRG | 1 cut(s) | 486 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1428 |
| EcoRII | CCWGG | 2 cut(s) | 497, 1424 |
| EcoT38I | GRGCYC | 1 cut(s) | 1560 |
| FaeI | CATG | 5 cut(s) | 231, 579, 1439, 1498, 1631 |
| FatI | CATG | 5 cut(s) | 227, 575, 1435, 1494, 1627 |
| FauNDI | CATATG | 1 cut(s) | 1217 |
| Fnu4HI | GCNGC | 2 cut(s) | 568, 1533 |
| FokI | GGATG | 1 cut(s) | 510 |
| FriOI | GRGCYC | 1 cut(s) | 1560 |
| Fsp4HI | GCNGC | 2 cut(s) | 568, 1533 |
| FspBI | CTAG | 1 cut(s) | 1514 |
| GluI | GCNGC | 2 cut(s) | 568, 1533 |
| GsuI | CTGGAG | 1 cut(s) | 1337 |
| HaeIII | GGCC | 3 cut(s) | 492, 1222, 1424 |
| HapII | CCGG | 2 cut(s) | 184, 1457 |
| Hin1II | CATG | 5 cut(s) | 231, 579, 1439, 1498, 1631 |
| HinfI | GANTC | 4 cut(s) | 4, 161, 785, 1500 |
| HpaII | CCGG | 2 cut(s) | 184, 1457 |
| HphI | GGTGA | 2 cut(s) | 62, 1443 |
| Hpy166II | GTNNAC | 1 cut(s) | 233 |
| Hpy188I | TCNGA | 1 cut(s) | 166 |
| Hpy188III | TCNNGA | 3 cut(s) | 366, 486, 768 |
| Hpy8I | GTNNAC | 1 cut(s) | 233 |
| HpyAV | CCTTC | 5 cut(s) | 161, 743, 791, 1275, 1470 |
| HpyCH4III | ACNGT | 2 cut(s) | 435, 1212 |
| HpyCH4IV | ACGT | 3 cut(s) | 93, 886, 1419 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1477, 1486 |
| HpyF3I | CTNAG | 3 cut(s) | 163, 1063, 1243 |
| HpySE526I | ACGT | 3 cut(s) | 93, 886, 1419 |
| Hsp92II | CATG | 5 cut(s) | 231, 579, 1439, 1498, 1631 |
| Kzo9I | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| LguI | GCTCTTC | 1 cut(s) | 441 |
| LmnI | GCTCC | 4 cut(s) | 575, 1204, 1279, 1362 |
| Lsp1109I | GCAGC | 1 cut(s) | 579 |
| LweI | GCATC | 1 cut(s) | 532 |
| MaeI | CTAG | 1 cut(s) | 1514 |
| MaeII | ACGT | 3 cut(s) | 93, 886, 1419 |
| MaeIII | GTNAC | 2 cut(s) | 158, 800 |
| MalI | GATC | 4 cut(s) | 475, 978, 1023, 1404 |
| MboI | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| MboII | GAAGA | 5 cut(s) | 389, 458, 618, 991, 1359 |
| MflI | RGATCY | 2 cut(s) | 473, 976 |
| MhlI | GDGCHC | 1 cut(s) | 1560 |
| MlsI | TGGCCA | 1 cut(s) | 1424 |
| MluNI | TGGCCA | 1 cut(s) | 1424 |
| MlyI | GAGTC | 1 cut(s) | 155 |
| MmeI | TCCRAC | 1 cut(s) | 551 |
| MnlI | CCTC | 4 cut(s) | 482, 522, 1370, 1464 |
| Mox20I | TGGCCA | 1 cut(s) | 1424 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1443, 1566 |
| MscI | TGGCCA | 1 cut(s) | 1424 |
| Msp20I | TGGCCA | 1 cut(s) | 1424 |
| MspI | CCGG | 2 cut(s) | 184, 1457 |
| MspR9I | CCNGG | 2 cut(s) | 499, 1426 |
| MvaI | CCWGG | 2 cut(s) | 499, 1426 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1477, 1486 |
| NdeI | CATATG | 1 cut(s) | 1217 |
| NdeII | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| NlaIII | CATG | 5 cut(s) | 231, 579, 1439, 1498, 1631 |
| NlaIV | GGNNCC | 5 cut(s) | 208, 475, 1200, 1223, 1536 |
| NmuCI | GTSAC | 1 cut(s) | 158 |
| NspI | RCATGY | 2 cut(s) | 231, 579 |
| NspV | TTCGAA | 1 cut(s) | 359 |
| PaeR7I | CTCGAG | 1 cut(s) | 486 |
| PceI | AGGCCT | 1 cut(s) | 492 |
| PciI | ACATGT | 2 cut(s) | 227, 575 |
| PciSI | GCTCTTC | 1 cut(s) | 441 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1443, 1566 |
| PfeI | GAWTC | 3 cut(s) | 4, 785, 1500 |
| PkrI | GCNGC | 2 cut(s) | 569, 1534 |
| PleI | GAGTC | 1 cut(s) | 155 |
| PpsI | GAGTC | 1 cut(s) | 155 |
| PpuMI | RGGWCCY | 1 cut(s) | 1428 |
| PscI | ACATGT | 2 cut(s) | 227, 575 |
| PshBI | ATTAAT | 2 cut(s) | 929, 1013 |
| PsiI | TTATAA | 3 cut(s) | 312, 635, 668 |
| Psp5II | RGGWCCY | 1 cut(s) | 1428 |
| Psp6I | CCWGG | 2 cut(s) | 497, 1424 |
| PspGI | CCWGG | 2 cut(s) | 497, 1424 |
| PspN4I | GGNNCC | 5 cut(s) | 208, 475, 1200, 1223, 1536 |
| PspPI | GGNCC | 3 cut(s) | 1212, 1221, 1428 |
| PspPPI | RGGWCCY | 1 cut(s) | 1428 |
| PsuI | RGATCY | 2 cut(s) | 473, 976 |
| RsaI | GTAC | 4 cut(s) | 232, 510, 663, 1148 |
| RsaNI | GTAC | 4 cut(s) | 231, 509, 662, 1147 |
| SapI | GCTCTTC | 1 cut(s) | 441 |
| SatI | GCNGC | 2 cut(s) | 568, 1533 |
| Sau3AI | GATC | 4 cut(s) | 473, 976, 1021, 1402 |
| Sau96I | GGNCC | 3 cut(s) | 1212, 1221, 1428 |
| ScaI | AGTACT | 2 cut(s) | 663, 1148 |
| SchI | GAGTC | 1 cut(s) | 155 |
| ScrFI | CCNGG | 2 cut(s) | 499, 1426 |
| SduI | GDGCHC | 1 cut(s) | 1560 |
| SfaNI | GCATC | 1 cut(s) | 532 |
| Sfr274I | CTCGAG | 1 cut(s) | 486 |
| SfuI | TTCGAA | 1 cut(s) | 359 |
| SinI | GGWCC | 2 cut(s) | 1212, 1428 |
| SlaI | CTCGAG | 1 cut(s) | 486 |
| SmlI | CTYRAG | 3 cut(s) | 364, 486, 1269 |
| SmoI | CTYRAG | 3 cut(s) | 364, 486, 1269 |
| SseBI | AGGCCT | 1 cut(s) | 492 |
| SsiI | CCGC | 1 cut(s) | 1532 |
| SspI | AATATT | 1 cut(s) | 418 |
| SspMI | CTAG | 1 cut(s) | 1514 |
| StuI | AGGCCT | 1 cut(s) | 492 |
| StyD4I | CCNGG | 2 cut(s) | 497, 1424 |
| TaaI | ACNGT | 2 cut(s) | 435, 1212 |
| TaiI | ACGT | 3 cut(s) | 96, 889, 1422 |
| TaqI | TCGA | 5 cut(s) | 359, 487, 556, 1570, 1618 |
| TaqII | GACCGA | 1 cut(s) | 1578 |
| TatI | WGTACW | 3 cut(s) | 230, 661, 1146 |
| TauI | GCSGC | 1 cut(s) | 1535 |
| TfiI | GAWTC | 3 cut(s) | 4, 785, 1500 |
| TscAI | CASTG | 2 cut(s) | 80, 438 |
| TseFI | GTSAC | 1 cut(s) | 158 |
| TseI | GCWGC | 1 cut(s) | 567 |
| Tsp45I | GTSAC | 1 cut(s) | 158 |
| TspDTI | ATGAA | 8 cut(s) | 459, 603, 691, 777, 943, 948, 1452, 1483 |
| TspGWI | ACGGA | 2 cut(s) | 1248, 1279 |
| TspRI | CASTG | 2 cut(s) | 80, 438 |
| VpaK11BI | GGWCC | 2 cut(s) | 1212, 1428 |
| VspI | ATTAAT | 2 cut(s) | 929, 1013 |
| XceI | RCATGY | 2 cut(s) | 231, 579 |
| XhoI | CTCGAG | 1 cut(s) | 486 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1443, 1566 |
| XspI | CTAG | 1 cut(s) | 1514 |
| ZrmI | AGTACT | 2 cut(s) | 663, 1148 |