pycom11g04870

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0009688
Physical Location & Seq
Reverse (-)
3765663 .. 3768404
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04870.1

Sequence Viewer

Length: 2118 bp
ATGGAGTCTTACCTACAAGGCCAAGATCTTTGGGATGTCGTTGGCGGTAATGAAGTTACGCAGCCAGAAGAAGACACCAGCGGCGCTTTGAGGAAGTGGAAGATCAAGGCAGGTAAGGCCATGTTTGCCTTAAAAACCACAGTTGAAGATGACATGTTAGAGCACATACGGAAGGCCAAGACACCAAAAGAAGCATGGGACACCTTCGCCACACTCTTTTCAAAGAGGAACGATACAAGACTGCAGCTTCTCGAGAACGAGTTGTTATCAGTGGCCCAAAGGGACATGACGATTGCGCAGTATTTCCACAAGAATGGCCACATGGCGAAGGATTGCTGGTTCAAAAGGCCTGCAGAAAGTAACGTCGCCAACTCAGAGAAGAAAAGTGAAGATGATTGGGACGTCATTGCGTCTCTAGCCCTGGAGGAAGAATGGGACGGTGAAGCATCTATTGCTATAAAGAAGAAAGAGTCAGCTCTCACAGCAACAAGTCTGGAGTCGATTGACTACCAGAATGATTGGATCGTGGATTCAGGCTGCTCAAACCATATGATAGGTGATGAGAAAAAGTTACAAAGTCTGACTGAGTACAAAGGAGGCCGCTTAGTGGTGACGGCTAACGACTCGAGGCTACCGATTGCTCACATCGGTAAGACAATAATTGAGCCCCGATACAACACTAACCATGTGCCGCTTCAAGATGTCTACCATGTTCTAGGTATGAAGAAAAATCTACTTTCAGTGCCGCAATTGACGTCGTTGGGAAATTATGTCTTGTTTGGTCCACGAGATGTGAAGGTGTATCGACACCTGAAGATCTTAGGGACGCCAACAATGGAGGGACGGCGACTGCAGTCAATCTATGTAATGTCAGCAGAAACTGCATACATAGACAAGACAAGGAAGAACGAGACAGCAGATTTATGGCACATGAGATTGGGTCACGTTAGCTATCACAAGCTAAATGTGATGATGATGAAGTCAATGCTTAAGGGGTTACCTCAGCTTGACGTGAGAACAGACACGGTCTGTGCAGGATGCCAGTATGGTAAAGCACATCAACTACCATACGAAGAGTCGAAGTTTAAAGCGAAAGAGCCGTTGGAGTTGGTGCATTCCGATGTGTTCGGGCCCGTCAAGCAACCATCGATAAGTGGGATGTGGTACATGGTGACGTTCATTGATGACTTCTCGAGGTATGTGTGGGTTTTCTTTATGAAAGAAAAATCTGAAACATTTTCAAAATTTAAAGAGTGTAAGGAGACAATTGAAGGAAAAGTAGGAAAGAAGATCCGTTGCATACGCACAGATAATGGAGGGGAATATACCTCGAATGAGTTTTCCCAGTATCTACAAGAATGTAGAATACGTCACCAGTTCACCTGTGCCAATACGCCACAACAGAATGGCGTAGCGGAAAGAAAGAACCGGCATCTTGCAGAAATATGTCGAAGTATGCTCCATGCCAAGAATGTACCAGGAAGGTTTTGGGCGGAAGCAATGAGAACTGCAGCTTATGTGATCAACAAGCTTCCTCAACCCAGGTGTTACACATCACGAGATGTGGTGTTTGATGAAGCATCTTCTTGGTGGTCCTCGGAAAAGGAGGCGTTGCCTGATTCAAGAGAGATAAAAGATAAGTTGCAGCAAAATATGGGGGAGCAAATTGTTCGAATCCAGTCGAGATCAGATGAGTCTGAAGATTCGCTTGATGGTGATGATGTTGAGCAAGCAGTGCCCCAAAACCCTTGCCAAGCTGACGTATATCAACAACCAGAAGAAGATAGACCTAGTGAAGTGGAAGTATCAACTCCACAATCACAACTAAGGAGGTCAACAAGAATCCGGAGGCAAAATCCGAGATACGTCAACACAGTCATAGAAGAAGAAACAGTTGAACCTGAGTGCTTCAAAGTTGGGAGAAGAGGTCACTGCAGCAAAGCTAAATCAAGCTTGGAATCCAGTGCCAAAGCGAAGAGATGTGAAACCCATATCATGCAAATGGGTATGCAAGAAAAAGTTTTGTCGTCAACTCAGCATGGAGAGAAGAATGAGCTGGTGTTGAGGGGGAGTGTTAAAAGTACAACACCAGCCCAAATAATAAAGATTGGCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

706

Amino Acids

80.61

Weight (kDa)

7.27

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 1 - 104 1e-10 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 174 - 255 8.6e-19 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 301 - 351 1.4e-12 GAG-pre-integrase domain
rve PF00665 365 - 466 5.9e-14 Integrase core domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 405, 758
Acc16I TGCGCA 1 cut(s) 297
Acc36I ACCTGC 1 cut(s) 101
AccI GTMKAC 1 cut(s) 705
AccIII TCCGGA 1 cut(s) 1845
AciI CCGC 7 cut(s) 45, 81, 601, 692, 746, 1415, 1493
AclWI GGATC 2 cut(s) 530, 1285
AcoI YGGCCR 1 cut(s) 316
AcsI RAATTY 1 cut(s) 1244
AcuI CTGAAG 2 cut(s) 833, 1719
AcyI GRCGYC 3 cut(s) 402, 755, 827
AfaI GTAC 4 cut(s) 590, 1166, 1476, 2083
AfiI CCNNNNNNNGG 1 cut(s) 607
AflII CTTAAG 1 cut(s) 989
AflIII ACRYGT 1 cut(s) 153
AgsI TTSAA 9 cut(s) 146, 222, 343, 698, 1242, 1271, 1623, 1898, 1912
AjiI CACGTC 1 cut(s) 1012
AjnI CCWGG 3 cut(s) 420, 1477, 1541
AjuI GAANNNNNNNTTGG 2 cut(s) 1085, 1117
AloI GAACNNNNNNTCC 2 cut(s) 323, 355
Alw21I GWGCWC 1 cut(s) 165
Alw26I GTCTC 3 cut(s) 417, 905, 1256
AlwI GGATC 2 cut(s) 530, 1285
AlwNI CAGNNNCTG 1 cut(s) 881
Ama87I CYCGRG 3 cut(s) 251, 625, 1192
Aor13HI TCCGGA 1 cut(s) 1845
AoxI GGCC 9 cut(s) 19, 117, 174, 273, 316, 347, 598, 1130, 2110
ApaI GGGCCC 1 cut(s) 1134
ApeKI GCWGC 6 cut(s) 61, 244, 537, 1511, 1645, 1935
ApoI RAATTY 1 cut(s) 1244
AspLEI GCGC 2 cut(s) 86, 298
AspS9I GGNCC 6 cut(s) 274, 782, 1130, 1131, 1593, 2111
AsuHPI GGTGA 7 cut(s) 452, 569, 622, 1183, 1364, 1372, 1727
AsuII TTCGAA 1 cut(s) 1672
AvaI CYCGRG 3 cut(s) 251, 625, 1192
AvaII GGWCC 2 cut(s) 782, 1593
BaeGI GKGCMC 2 cut(s) 1134, 1740
BalI TGGCCA 1 cut(s) 318
BanII GRGCYC 2 cut(s) 669, 1134
BauI CACGAG 2 cut(s) 786, 1557
BbsI GAAGAC 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 165
BbvCI CCTCAGC 1 cut(s) 1002
BbvI GCAGC 6 cut(s) 73, 256, 524, 1523, 1657, 1947
BccI CCATC 2 cut(s) 1153, 1706
BceAI ACGGC 3 cut(s) 630, 860, 1084
BcgI CGANNNNNNTGC 2 cut(s) 1652, 1686
BciT130I CCWGG 3 cut(s) 422, 1479, 1543
BclI TGATCA 1 cut(s) 1521
BcoDI GTCTC 3 cut(s) 417, 905, 1256
BfaI CTAG 3 cut(s) 416, 716, 1791
BfmI CTRYAG 5 cut(s) 242, 351, 851, 1509, 1933
BfoI RGCGCY 1 cut(s) 87
BfrI CTTAAG 1 cut(s) 989
BfuAI ACCTGC 1 cut(s) 101
BglII AGATCT 2 cut(s) 25, 816
Bme1390I CCNGG 3 cut(s) 422, 1479, 1543
Bme18I GGWCC 2 cut(s) 782, 1593
BmeT110I CYCGRG 3 cut(s) 251, 625, 1192
BmgBI CACGTC 1 cut(s) 1012
BmgT120I GGNCC 6 cut(s) 274, 782, 1130, 1131, 1593, 2111
BmiI GGNNCC 1 cut(s) 1132
BmrFI CCNGG 3 cut(s) 422, 1479, 1543
BmrI ACTGGG 1 cut(s) 1339
BmsI GCATC 4 cut(s) 455, 1028, 1441, 1589
BmuI ACTGGG 1 cut(s) 1339
BoxI GACNNNNGTC 1 cut(s) 853
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 2 cut(s) 443, 515
Bpu10I CCTNAGC 1 cut(s) 1002
Bpu14I TTCGAA 1 cut(s) 1672
Bsa29I ATCGAT 1 cut(s) 1148
BsaHI GRCGYC 3 cut(s) 402, 755, 827
BsaJI CCNNGG 3 cut(s) 420, 1541, 1596
BsaWI WCCGGW 1 cut(s) 1845
BsaXI ACNNNNNCTCC 2 cut(s) 1912, 1942
Bsc4I CCNNNNNNNGG 1 cut(s) 607
Bse118I RCCGGY 1 cut(s) 1428
Bse1I ACTGG 5 cut(s) 1042, 1345, 1375, 1678, 1962
Bse3DI GCAATG 2 cut(s) 405, 1506
BseAI TCCGGA 1 cut(s) 1845
BseBI CCWGG 3 cut(s) 422, 1479, 1543
BseCI ATCGAT 1 cut(s) 1148
BseDI CCNNGG 3 cut(s) 420, 1541, 1596
BseGI GGATG 3 cut(s) 40, 1043, 1164
BseLI CCNNNNNNNGG 1 cut(s) 607
BseMI GCAATG 2 cut(s) 405, 1506
BseMII CTCAG 5 cut(s) 387, 576, 1016, 1893, 2048
BseNI ACTGG 5 cut(s) 1042, 1345, 1375, 1678, 1962
BseSI GKGCMC 2 cut(s) 1134, 1740
BseXI GCAGC 6 cut(s) 73, 256, 524, 1523, 1657, 1947
BsgI GTGCAG 1 cut(s) 1053
BshFI GGCC 9 cut(s) 21, 119, 176, 275, 318, 349, 600, 1132, 2112
BshVI ATCGAT 1 cut(s) 1148
BsiHKAI GWGCWC 1 cut(s) 165
BsiHKCI CYCGRG 3 cut(s) 251, 625, 1192
BsiSI CCGG 2 cut(s) 1429, 1846
BslFI GGGAC 6 cut(s) 212, 296, 413, 449, 838, 855
BslI CCNNNNNNNGG 1 cut(s) 607
BsmAI GTCTC 3 cut(s) 417, 905, 1256
BsmBI CGTCTC 1 cut(s) 417
BsmFI GGGAC 6 cut(s) 212, 296, 413, 449, 838, 855
BsmI GAATGC 1 cut(s) 1114
BsnI GGCC 9 cut(s) 21, 119, 176, 275, 318, 349, 600, 1132, 2112
BsoBI CYCGRG 3 cut(s) 251, 625, 1192
Bsp119I TTCGAA 1 cut(s) 1672
Bsp120I GGGCCC 1 cut(s) 1130
Bsp1286I GDGCHC 4 cut(s) 165, 669, 1134, 1740
Bsp13I TCCGGA 1 cut(s) 1845
Bsp143I GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
BspACI CCGC 7 cut(s) 45, 81, 601, 692, 746, 1415, 1493
BspANI GGCC 9 cut(s) 21, 119, 176, 275, 318, 349, 600, 1132, 2112
BspCNI CTCAG 5 cut(s) 386, 577, 1015, 1894, 2047
BspDI ATCGAT 1 cut(s) 1148
BspEI TCCGGA 1 cut(s) 1845
BspLI GGNNCC 1 cut(s) 1132
BspMAI CTGCAG 5 cut(s) 246, 355, 855, 1513, 1937
BspMI ACCTGC 1 cut(s) 101
BspPI GGATC 2 cut(s) 530, 1285
BspT104I TTCGAA 1 cut(s) 1672
BspTI CTTAAG 1 cut(s) 989
BsrDI GCAATG 2 cut(s) 405, 1506
BsrFI RCCGGY 1 cut(s) 1428
BsrI ACTGG 5 cut(s) 1042, 1345, 1375, 1678, 1962
BssAI RCCGGY 1 cut(s) 1428
BssECI CCNNGG 3 cut(s) 420, 1541, 1596
BssMI GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
BssNI GRCGYC 3 cut(s) 402, 755, 827
BssSI CACGAG 2 cut(s) 786, 1557
Bst2BI CACGAG 2 cut(s) 786, 1557
Bst2UI CCWGG 3 cut(s) 422, 1479, 1543
Bst4CI ACNGT 5 cut(s) 142, 440, 1027, 1876, 1894
Bst6I CTCTTC 3 cut(s) 1068, 1918, 1970
BstACI GRCGYC 3 cut(s) 402, 755, 827
BstAFI CTTAAG 1 cut(s) 989
BstAPI GCANNNNNTGC 3 cut(s) 452, 881, 1735
BstBI TTCGAA 1 cut(s) 1672
BstC8I GCNNGC 2 cut(s) 351, 1731
BstDEI CTNAG 8 cut(s) 373, 585, 604, 820, 1002, 1826, 1902, 2034
BstEII GGTNACC 1 cut(s) 996
BstF5I GGATG 3 cut(s) 40, 1043, 1164
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 2 cut(s) 86, 298
BstKTI GATC 7 cut(s) 28, 105, 525, 819, 1293, 1524, 1688
BstMAI GTCTC 3 cut(s) 417, 905, 1256
BstMBI GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
BstMWI GCNNNNNNNGC 8 cut(s) 116, 125, 416, 452, 482, 881, 1138, 1735
BstNI CCWGG 3 cut(s) 422, 1479, 1543
BstNSI RCATGY 1 cut(s) 157
BstPAI GACNNNNGTC 1 cut(s) 853
BstPI GGTNACC 1 cut(s) 996
BstSCI CCNGG 3 cut(s) 420, 1477, 1541
BstSFI CTRYAG 5 cut(s) 242, 351, 851, 1509, 1933
BstSLI GKGCMC 2 cut(s) 1134, 1740
BstV1I GCAGC 6 cut(s) 73, 256, 524, 1523, 1657, 1947
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 3 cut(s) 25, 816, 1290
BstXI CCANNNNNNTGG 1 cut(s) 314
BstYI RGATCY 3 cut(s) 25, 816, 1290
Bsu15I ATCGAT 1 cut(s) 1148
BsuRI GGCC 9 cut(s) 21, 119, 176, 275, 318, 349, 600, 1132, 2112
BsuTUI ATCGAT 1 cut(s) 1148
BtrI CACGTC 1 cut(s) 1012
BtsCI GGATG 3 cut(s) 40, 1043, 1164
BtsI GCAGTG 2 cut(s) 1740, 1930
BtsIMutI CAGTG 5 cut(s) 276, 747, 1740, 1930, 1969
BveI ACCTGC 1 cut(s) 101
Cac8I GCNNGC 2 cut(s) 351, 1731
CaiI CAGNNNCTG 1 cut(s) 881
CfoI GCGC 2 cut(s) 86, 298
Cfr10I RCCGGY 1 cut(s) 1428
Cfr13I GGNCC 6 cut(s) 274, 782, 1130, 1131, 1593, 2111
ClaI ATCGAT 1 cut(s) 1148
CseI GACGC 2 cut(s) 399, 835
Csp6I GTAC 4 cut(s) 589, 1165, 1475, 2082
CviQI GTAC 4 cut(s) 589, 1165, 1475, 2082
DdeI CTNAG 8 cut(s) 373, 585, 604, 820, 1002, 1826, 1902, 2034
DpnI GATC 7 cut(s) 27, 104, 524, 818, 1292, 1523, 1687
DpnII GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
DraI TTTAAA 2 cut(s) 1087, 1249
EaeI YGGCCR 1 cut(s) 316
Eam1104I CTCTTC 3 cut(s) 1068, 1918, 1970
EarI CTCTTC 3 cut(s) 1068, 1918, 1970
EciI GGCGGA 1 cut(s) 1508
Eco147I AGGCCT 1 cut(s) 349
Eco24I GRGCYC 2 cut(s) 669, 1134
Eco47I GGWCC 2 cut(s) 782, 1593
Eco57I CTGAAG 2 cut(s) 833, 1719
Eco88I CYCGRG 3 cut(s) 251, 625, 1192
Eco91I GGTNACC 1 cut(s) 996
EcoO65I GGTNACC 1 cut(s) 996
EcoRII CCWGG 3 cut(s) 420, 1477, 1541
EcoT38I GRGCYC 2 cut(s) 669, 1134
Esp3I CGTCTC 1 cut(s) 417
FalI AAGNNNNNCTT 2 cut(s) 1692, 1724
FaqI GGGAC 6 cut(s) 212, 296, 413, 449, 838, 855
FauNDI CATATG 1 cut(s) 549
FbaI TGATCA 1 cut(s) 1521
FblI GTMKAC 1 cut(s) 705
FokI GGATG 3 cut(s) 47, 1050, 1171
FriOI GRGCYC 2 cut(s) 669, 1134
FspBI CTAG 3 cut(s) 416, 716, 1791
FspI TGCGCA 1 cut(s) 297
GlaI GCGC 2 cut(s) 85, 297
GsuI CTGGAG 2 cut(s) 443, 515
HaeII RGCGCY 1 cut(s) 87
HaeIII GGCC 9 cut(s) 21, 119, 176, 275, 318, 349, 600, 1132, 2112
HapII CCGG 2 cut(s) 1429, 1846
HgaI GACGC 2 cut(s) 399, 835
HhaI GCGC 2 cut(s) 86, 298
Hin1I GRCGYC 3 cut(s) 402, 755, 827
Hin6I GCGC 2 cut(s) 84, 296
HinP1I GCGC 2 cut(s) 84, 296
HincII GTYRAC 3 cut(s) 1836, 1870, 2031
HindII GTYRAC 3 cut(s) 1836, 1870, 2031
HindIII AAGCTT 2 cut(s) 1529, 1951
HpaII CCGG 2 cut(s) 1429, 1846
HphI GGTGA 7 cut(s) 452, 569, 622, 1183, 1364, 1372, 1727
Hpy166II GTNNAC 6 cut(s) 706, 785, 1380, 1836, 1870, 2031
Hpy188I TCNGA 8 cut(s) 376, 582, 1120, 1231, 1600, 1690, 1699, 1860
Hpy188III TCNNGA 9 cut(s) 251, 253, 494, 698, 1192, 1557, 1623, 1683, 1846
Hpy8I GTNNAC 6 cut(s) 706, 785, 1380, 1836, 1870, 2031
Hpy99I CGWCG 2 cut(s) 368, 760
HpyAV CCTTC 6 cut(s) 166, 214, 322, 790, 1265, 1476
HpyCH4III ACNGT 5 cut(s) 142, 440, 1027, 1876, 1894
HpyCH4IV ACGT 9 cut(s) 363, 402, 755, 945, 1011, 1175, 1369, 1761, 1866
HpyF10VI GCNNNNNNNGC 8 cut(s) 116, 125, 416, 452, 482, 881, 1138, 1735
HpyF3I CTNAG 8 cut(s) 373, 585, 604, 820, 1002, 1826, 1902, 2034
HpySE526I ACGT 9 cut(s) 363, 402, 755, 945, 1011, 1175, 1369, 1761, 1866
Hsp92I GRCGYC 3 cut(s) 402, 755, 827
HspAI GCGC 2 cut(s) 84, 296
Kpn2I TCCGGA 1 cut(s) 1845
Ksp22I TGATCA 1 cut(s) 1521
Kzo9I GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
LmnI GCTCC 2 cut(s) 1464, 1660
Lsp1109I GCAGC 6 cut(s) 73, 256, 524, 1523, 1657, 1947
LweI GCATC 4 cut(s) 455, 1028, 1441, 1589
MaeI CTAG 3 cut(s) 416, 716, 1791
MaeII ACGT 9 cut(s) 363, 402, 755, 945, 1011, 1175, 1369, 1761, 1866
MalI GATC 7 cut(s) 27, 104, 524, 818, 1292, 1523, 1687
MboI GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
MfeI CAATTG 2 cut(s) 749, 1266
MflI RGATCY 3 cut(s) 25, 816, 1290
MhlI GDGCHC 4 cut(s) 165, 669, 1134, 1740
MlsI TGGCCA 1 cut(s) 318
MluCI AATT 6 cut(s) 660, 749, 766, 1244, 1266, 1665
MluNI TGGCCA 1 cut(s) 318
MlyI GAGTC 6 cut(s) 14, 479, 506, 617, 1085, 1703
MmeI TCCRAC 1 cut(s) 1083
Mox20I TGGCCA 1 cut(s) 318
MroI TCCGGA 1 cut(s) 1845
MscI TGGCCA 1 cut(s) 318
MseI TTAA 5 cut(s) 131, 990, 1086, 1248, 2076
MslI CAYNNNNRTG 3 cut(s) 312, 1119, 2000
Msp20I TGGCCA 1 cut(s) 318
MspA1I CMGCKG 1 cut(s) 81
MspCI CTTAAG 1 cut(s) 989
MspI CCGG 2 cut(s) 1429, 1846
MspR9I CCNGG 3 cut(s) 422, 1479, 1543
MunI CAATTG 2 cut(s) 749, 1266
Mva1269I GAATGC 1 cut(s) 1114
MvaI CCWGG 3 cut(s) 422, 1479, 1543
MwoI GCNNNNNNNGC 8 cut(s) 116, 125, 416, 452, 482, 881, 1138, 1735
NdeI CATATG 1 cut(s) 549
NdeII GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
NlaIV GGNNCC 1 cut(s) 1132
NmuCI GTSAC 5 cut(s) 610, 941, 1171, 1370, 1928
NsbI TGCGCA 1 cut(s) 297
NspI RCATGY 1 cut(s) 157
NspV TTCGAA 1 cut(s) 1672
PaeR7I CTCGAG 3 cut(s) 251, 625, 1192
PceI AGGCCT 1 cut(s) 349
PciI ACATGT 1 cut(s) 153
PcsI WCGNNNNNNNCGW 1 cut(s) 632
PctI GAATGC 1 cut(s) 1114
PfeI GAWTC 6 cut(s) 530, 1619, 1674, 1703, 1842, 1958
PflFI GACNNNGTC 1 cut(s) 1025
PleI GAGTC 6 cut(s) 13, 478, 505, 617, 1084, 1702
PpsI GAGTC 6 cut(s) 13, 478, 505, 617, 1084, 1702
PscI ACATGT 1 cut(s) 153
PshAI GACNNNNGTC 1 cut(s) 853
Psp6I CCWGG 3 cut(s) 420, 1477, 1541
PspEI GGTNACC 1 cut(s) 996
PspGI CCWGG 3 cut(s) 420, 1477, 1541
PspN4I GGNNCC 1 cut(s) 1132
PspOMI GGGCCC 1 cut(s) 1130
PspPI GGNCC 6 cut(s) 274, 782, 1130, 1131, 1593, 2111
PspXI VCTCGAGB 1 cut(s) 625
PstI CTGCAG 5 cut(s) 246, 355, 855, 1513, 1937
PstNI CAGNNNCTG 1 cut(s) 881
PsuI RGATCY 3 cut(s) 25, 816, 1290
PsyI GACNNNGTC 1 cut(s) 1025
RsaI GTAC 4 cut(s) 590, 1166, 1476, 2083
RsaNI GTAC 4 cut(s) 589, 1165, 1475, 2082
RseI CAYNNNNRTG 3 cut(s) 312, 1119, 2000
SaqAI TTAA 5 cut(s) 131, 990, 1086, 1248, 2076
Sau3AI GATC 7 cut(s) 25, 102, 522, 816, 1290, 1521, 1685
Sau96I GGNCC 6 cut(s) 274, 782, 1130, 1131, 1593, 2111
SchI GAGTC 6 cut(s) 14, 479, 506, 617, 1085, 1703
ScrFI CCNGG 3 cut(s) 422, 1479, 1543
SduI GDGCHC 4 cut(s) 165, 669, 1134, 1740
SfaNI GCATC 4 cut(s) 455, 1028, 1441, 1589
SfcI CTRYAG 5 cut(s) 242, 351, 851, 1509, 1933
Sfr274I CTCGAG 3 cut(s) 251, 625, 1192
SfuI TTCGAA 1 cut(s) 1672
SinI GGWCC 2 cut(s) 782, 1593
SlaI CTCGAG 3 cut(s) 251, 625, 1192
SmiMI CAYNNNNRTG 3 cut(s) 312, 1119, 2000
SmlI CTYRAG 4 cut(s) 251, 625, 989, 1192
SmoI CTYRAG 4 cut(s) 251, 625, 989, 1192
Sse9I AATT 6 cut(s) 660, 749, 766, 1244, 1266, 1665
SseBI AGGCCT 1 cut(s) 349
SsiI CCGC 7 cut(s) 45, 81, 601, 692, 746, 1415, 1493
SspMI CTAG 3 cut(s) 416, 716, 1791
StuI AGGCCT 1 cut(s) 349
StyD4I CCNGG 3 cut(s) 420, 1477, 1541
TaaI ACNGT 5 cut(s) 142, 440, 1027, 1876, 1894
TaiI ACGT 9 cut(s) 366, 405, 758, 948, 1014, 1178, 1372, 1764, 1869
TasI AATT 6 cut(s) 660, 749, 766, 1244, 1266, 1665
TatI WGTACW 2 cut(s) 588, 2081
TauI GCSGC 4 cut(s) 84, 603, 694, 748
TfiI GAWTC 6 cut(s) 530, 1619, 1674, 1703, 1842, 1958
Tru1I TTAA 5 cut(s) 131, 990, 1086, 1248, 2076
Tru9I TTAA 5 cut(s) 131, 990, 1086, 1248, 2076
TscAI CASTG 5 cut(s) 276, 747, 1740, 1937, 1969
TseFI GTSAC 5 cut(s) 610, 941, 1171, 1370, 1928
TseI GCWGC 6 cut(s) 61, 244, 537, 1511, 1645, 1935
Tsp45I GTSAC 5 cut(s) 610, 941, 1171, 1370, 1928
TspDTI ATGAA 6 cut(s) 66, 737, 992, 1168, 1232, 1590
TspGWI ACGGA 2 cut(s) 184, 1283
TspRI CASTG 5 cut(s) 276, 747, 1740, 1937, 1969
Tth111I GACNNNGTC 1 cut(s) 1025
Vha464I CTTAAG 1 cut(s) 989
VpaK11BI GGWCC 2 cut(s) 782, 1593
XapI RAATTY 1 cut(s) 1244
XceI RCATGY 1 cut(s) 157
XcmI CCANNNNNNNNNTGG 2 cut(s) 192, 1485
XhoI CTCGAG 3 cut(s) 251, 625, 1192
XmiI GTMKAC 1 cut(s) 705
XspI CTAG 3 cut(s) 416, 716, 1791
ZraI GACGTC 2 cut(s) 403, 756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.