Domain of unknown function (DUF4219)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g19322 FvH4_5g31431 |
| malus_domestica | MD01G1222200.v1.1 MD14G1034300.v1.1 |
| prunus_persica | Prupe.2G033500_v2.0.a1 Prupe.7G032100_v2.0.a1 |
| pyrus_communis | pycom02g19670 pycom03g19000 pycom11g04720 pycom11g04870 pycom11g07640 pycom12g10550 pycom13g07730 pycom16g07450 pycom520g00380 |
| rosa_chinensis | RchiOBHm_Chr3g0481931 RchiOBHm_Chr3g0481941 RchiOBHm_Chr5g0017901 RchiOBHm_Chr5g0017911 |
| rosa_roxburghii | Rroxscaffold_1G00053310 Rroxscaffold_4G00308650 |
| rosa_rugosa | Rorug07G0315400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 143, 166 |
| AcvI | CACGTG | 1 cut(s) | 60 |
| AcyI | GRCGYC | 1 cut(s) | 159 |
| AflIII | ACRYGT | 2 cut(s) | 57, 68 |
| AgsI | TTSAA | 2 cut(s) | 14, 89 |
| AluBI | AGCT | 1 cut(s) | 37 |
| AluI | AGCT | 1 cut(s) | 37 |
| ApeKI | GCWGC | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| BbrPI | CACGTG | 1 cut(s) | 60 |
| BbvI | GCAGC | 1 cut(s) | 152 |
| BceAI | ACGGC | 1 cut(s) | 172 |
| BisI | GCNGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 1 cut(s) | 142 |
| BmsI | GCATC | 2 cut(s) | 139, 194 |
| BsaAI | YACGTR | 1 cut(s) | 60 |
| BsaHI | GRCGYC | 1 cut(s) | 159 |
| Bse118I | RCCGGY | 1 cut(s) | 136 |
| BseGI | GGATG | 1 cut(s) | 209 |
| BseXI | GCAGC | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 137 |
| Bsp143I | GATC | 1 cut(s) | 7 |
| BspACI | CCGC | 2 cut(s) | 143, 166 |
| BsrFI | RCCGGY | 1 cut(s) | 136 |
| BssAI | RCCGGY | 1 cut(s) | 136 |
| BssMI | GATC | 1 cut(s) | 7 |
| BssNI | GRCGYC | 1 cut(s) | 159 |
| BstACI | GRCGYC | 1 cut(s) | 159 |
| BstBAI | YACGTR | 1 cut(s) | 60 |
| BstC8I | GCNNGC | 1 cut(s) | 187 |
| BstF5I | GGATG | 1 cut(s) | 209 |
| BstKTI | GATC | 1 cut(s) | 10 |
| BstMBI | GATC | 1 cut(s) | 7 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 149 |
| BstV1I | GCAGC | 1 cut(s) | 152 |
| BtsCI | GGATG | 1 cut(s) | 209 |
| Cac8I | GCNNGC | 1 cut(s) | 187 |
| Cfr10I | RCCGGY | 1 cut(s) | 136 |
| CseI | GACGC | 1 cut(s) | 148 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 83, 118 |
| CviJI | RGCY | 1 cut(s) | 37 |
| CviKI_1 | RGCY | 1 cut(s) | 37 |
| DpnI | GATC | 1 cut(s) | 9 |
| DpnII | GATC | 1 cut(s) | 7 |
| Eco72I | CACGTG | 1 cut(s) | 60 |
| FaiI | YATR | 2 cut(s) | 54, 74 |
| Fnu4HI | GCNGC | 1 cut(s) | 141 |
| Fsp4HI | GCNGC | 1 cut(s) | 141 |
| GluI | GCNGC | 1 cut(s) | 141 |
| HapII | CCGG | 1 cut(s) | 137 |
| HgaI | GACGC | 1 cut(s) | 148 |
| Hin1I | GRCGYC | 1 cut(s) | 159 |
| HinfI | GANTC | 2 cut(s) | 27, 77 |
| HpaII | CCGG | 1 cut(s) | 137 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 95 |
| HpyAV | CCTTC | 1 cut(s) | 95 |
| HpyCH4IV | ACGT | 2 cut(s) | 59, 68 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 149 |
| HpySE526I | ACGT | 2 cut(s) | 59, 68 |
| Hsp92I | GRCGYC | 1 cut(s) | 159 |
| Kzo9I | GATC | 1 cut(s) | 7 |
| LpnPI | CCDG | 2 cut(s) | 150, 171 |
| Lsp1109I | GCAGC | 1 cut(s) | 152 |
| LweI | GCATC | 2 cut(s) | 139, 194 |
| MaeII | ACGT | 2 cut(s) | 59, 68 |
| MaeIII | GTNAC | 1 cut(s) | 127 |
| MalI | GATC | 1 cut(s) | 9 |
| MboI | GATC | 1 cut(s) | 7 |
| MboII | GAAGA | 1 cut(s) | 158 |
| MluCI | AATT | 1 cut(s) | 177 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MnlI | CCTC | 2 cut(s) | 17, 100 |
| MseI | TTAA | 1 cut(s) | 180 |
| MspA1I | CMGCKG | 1 cut(s) | 143 |
| MspI | CCGG | 1 cut(s) | 137 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 149 |
| NdeII | GATC | 1 cut(s) | 7 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 65 |
| PfeI | GAWTC | 1 cut(s) | 27 |
| PkrI | GCNGC | 1 cut(s) | 142 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PmaCI | CACGTG | 1 cut(s) | 60 |
| PmlI | CACGTG | 1 cut(s) | 60 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| Ppu21I | YACGTR | 1 cut(s) | 60 |
| PspCI | CACGTG | 1 cut(s) | 60 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| SatI | GCNGC | 1 cut(s) | 141 |
| Sau3AI | GATC | 1 cut(s) | 7 |
| SchI | GAGTC | 1 cut(s) | 86 |
| SetI | ASST | 6 cut(s) | 39, 62, 71, 87, 94, 111 |
| SfaNI | GCATC | 2 cut(s) | 139, 194 |
| Sse9I | AATT | 1 cut(s) | 177 |
| SsiI | CCGC | 2 cut(s) | 143, 166 |
| TaiI | ACGT | 2 cut(s) | 62, 71 |
| TasI | AATT | 1 cut(s) | 177 |
| TfiI | GAWTC | 1 cut(s) | 27 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| TseI | GCWGC | 1 cut(s) | 140 |