Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0014704

Physical Location & Seq

Genomic Coordinates Reverse (-)

3782574 .. 3785624

Gene Structure 3051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g04890.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGGTAAGGCAAATGCATTGAGTAATCAGACCTGGGTATGCCAGGTTCGGAAATTATCAAGACCAAAAGGCTACTTTTTCGGTGATAGCCCTTTAAACTTCGCTACTCCCCTCCTTTACGTACAGCTTTCCATATCTGCCTTACTCTCCGCTTTCCTCCAATTCATTCTCTACCCTCTTGGCCAGACTGCTTTCATACCACAAATGCTCGCAGGTATTATACTGGGACCATCAGTCTTAGGATCAGGCAATGCCTTTGCAGATACAATTTTCCCACTGAAAAGCTTTTACATCAGCCAAACCTATGCGTTATTTGGTGTCATGCTGTTTCTCTTCCTAGTTGGAGTTAAAATGGACATAAGTTTGGTGAAACAATCAGGAAGGAAAGCCGTGGTCATAGGCCTCTCGTCTTTCTTCGTCCCCTTGATCCTCAACATCGGCTTCGCTTTTATCCTACGAAAGACAGTCGCGATGGAAACAAACCTACGAAAGTCGATCATCATCATCGCGGTGTTTCAATGCCTAAGCTCGTTCCACGTCATCGCCTGCCTCTTGGCCGATTTGAATCTCCTCAACTCGGAGATTGGGAGATTGGCTGTGTCTTCATCAACAGTCAGTGGGGTGCTATCTTTGATTTGGGTCAGTTTGGCCTTCACAATAAGGCAAAGCAACATTTCAAAAAAGGATCTTAGTCTACCCTTTATGGGGTTGAGCTTGTTTTGTATGTTCATCCTCATAGTCTACATTTTGAGGCCTATAATGTTATGGATAGTTGCACAAATTACAGATAAAGGAAGATCCATGAAAGATAGCTACATTTTTTCAGTATTTATCATGGTAATGGTGTGTTCTTTTCTTGGTGAGGTTGTGGGCCAGCACTTTATAATGGGGCCCATGATTTTAGGGTTGGCAGTGCCAGATGGACCACCATTGGGATCAGCTTTGGTTGAGAAACTTGACTCCTACGTCTCATCGATTCTGTTGCCGAGCTACTTTGTGCTCACTGGTGCAAGGATTAATTTCTCCATGATAAAGATGAAGACTGTTTGGATTGTGGAGCTATTGGTTATGAGTAGCTTTTGTGGTAAACTTGTAGGAACTGTGGTGCCTTCTCTCTATTTCAAAATGTCTCCTATCGATTCACTCTCACTAGGGCTTATCATGAGTGCTCAAGGCATCATTGACGTTATAAATTTGAACCATGCATTGTTACTCTCCCTGATTGACGAAGAAGCCTATAGCGTTATGGCTCTGTCAGCACTCGTCTTAACTGCAATAATCACCCCCATAGTGAAATATCTGTACAATCCATCCAAGAGATATATGTCCACCAAAAGAAGGAGGACAATTGAGCATGCCTTTCGCAATGCCGAGCTTCGAATTCTTGCGTGCATATACCACGAAGAGAGCACCCCTTCCATCATCAGCCTTCTTGAAGTCTCCAACCCAACCCCCAAAACCCCCATATGCTTTTATGTTGTCCACCTCGTGAGACTATCCGGCAGAACCGCCCCAATCCTCACAACACATCGACTCGAAAAAAGGAGTGCTAGTACATTTCATTCCGGTAACTCAGATCGGATAGTCAATGCCTTCAGATTATATGAAGAACATAGCTCTGGTGGACTTATAATGAATGCATTGACAGCCATTGCACCCTACGCCACAATGCATGATGATGTTTGCACATTGGCATTGGAAAAAAGGACTTCCATGGTCCTAATCCCATTCCACAAGCAATTCAATTCGCTAAGTTGCACAGAGGAATTATCCGAACCTATTAGGTCCGTGAATCAAAACATTCTTCGAAATTCCCCATGCTCAGTTGGGATTCTCCTCGATCGTGGTACCTTGAACACCAACACATCTCTATCATGCAAAATTTTGTACAATATTGGGATTATCTTTGTAGAAGGACCTGATGACCGTGAGGCATTGGCATATGCAATGCGCATGGCGGAGCATCCTAATGTCAGCCTCACAGTTGTTAGATTGGCTGACAATAGGAAATGCAGTGTGCATAAAGAACATGATTTGGAGCTACTCAGCAAGTGTAAGATAGAAATTGCAGGGAAAAAGCAACATGTTTACAAGGAGGAACGTGTTAAAGATAGCGTGGACATGATCAATGTGATTAGGACCATAGAAAATTTTTATGACCTAATTTTGGTGGGGAGACGCCACGATAGTGATTCACCATTGTTCATGGGACTCACAGAATGGAATGAGTTTCCGGAACTTGGGTTCATTGGAGATATGTTGGCATCTTCAGATTCCAATTGTGAGGTCTCGGTGTTGGTGGTGCAGCAACAAATGGTTGGAAATTCGGCAGTTGGATCGATCAACAGATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

785

Amino Acids

86.96

Weight (kDa)

8.79

Isoelectric Point (pI)

47.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014704)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g39830 FvH4_3g39830
malus_domestica	MD03G1057100.v1.1 MD11G1059100.v1.1
prunus_persica	Prupe.6G047700_v2.0.a1
pyrus_communis	pycom11g04890
rosa_chinensis	RchiOBHm_Chr5g0071771
rosa_laevigata	RLG00000036244
rosa_multiflora	Rmu_sc0001113.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009450
rosa_rugosa	Rorug05G0414400 Rorug05G0414500
rosa_samantha	Rh5AG470500 Rh5BG490200 Rh5CG514200 Rh5DG500900
rosa_wichuraiana	Rw5G043720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	884, 1190, 1631
AasI	GACNNNNNNGTC	1 cut(s)	965
Acc16I	TGCGCA	1 cut(s)	1952
Acc36I	ACCTGC	1 cut(s)	203
Acc65I	GGTACC	1 cut(s)	1847
AccB1I	GGYRCC	2 cut(s)	1105, 1847
AccI	GTMKAC	2 cut(s)	694, 741
AccII	CGCG	2 cut(s)	470, 509
AccIII	TCCGGA	1 cut(s)	2233
AciI	CCGC	4 cut(s)	150, 509, 1509, 1958
AclWI	GGATC	6 cut(s)	250, 421, 693, 792, 943, 2344
AcoI	YGGCCR	2 cut(s)	181, 555
AcsI	RAATTY	6 cut(s)	1192, 1380, 1810, 1881, 2149, 2323
AcuI	CTGAAG	2 cut(s)	1579, 2253
AcyI	GRCGYC	1 cut(s)	2179
AdeI	CACNNNGTG	1 cut(s)	1489
AfaI	GTAC	5 cut(s)	123, 1304, 1555, 1849, 1889
AfiI	CCNNNNNNNGG	7 cut(s)	577, 704, 705, 932, 1338, 2167, 2240
AflIII	ACRYGT	2 cut(s)	2083, 2101
AgsI	TTSAA	8 cut(s)	518, 565, 678, 1123, 1198, 1436, 1744, 1855
AhdI	GACNNNNNGTC	1 cut(s)	233
AjiI	CACGTC	1 cut(s)	538
AjnI	CCWGG	2 cut(s)	32, 42
AleI	CACNNNNGTG	1 cut(s)	2187
AloI	GAACNNNNNNTCC	2 cut(s)	2228, 2260
Alw21I	GWGCWC	3 cut(s)	1002, 1171, 1412
Alw26I	GTCTC	6 cut(s)	973, 1134, 1444, 1486, 2170, 2293
AlwI	GGATC	6 cut(s)	250, 421, 693, 792, 943, 2344
Aor13HI	TCCGGA	1 cut(s)	2233
AoxI	GGCC	7 cut(s)	181, 400, 555, 648, 752, 871, 890
ApaI	GGGCCC	1 cut(s)	894
ApeKI	GCWGC	1 cut(s)	2305
ApoI	RAATTY	6 cut(s)	1192, 1380, 1810, 1881, 2149, 2323
AseI	ATTAAT	1 cut(s)	1017
Asp718I	GGTACC	1 cut(s)	1847
AspLEI	GCGC	1 cut(s)	1953
AspS9I	GGNCC	9 cut(s)	227, 871, 890, 891, 923, 1717, 1785, 1916, 2139
AsuHPI	GGTGA	5 cut(s)	95, 379, 872, 1273, 2187
AsuII	TTCGAA	2 cut(s)	1378, 1807
AvaII	GGWCC	6 cut(s)	227, 923, 1717, 1785, 1916, 2139
BaeGI	GKGCMC	1 cut(s)	894
BalI	TGGCCA	1 cut(s)	183
BanI	GGYRCC	2 cut(s)	1105, 1847
BanII	GRGCYC	1 cut(s)	894
BauI	CACGAG	1 cut(s)	1487
BbsI	GAAGAC	2 cut(s)	594, 1046
Bbv12I	GWGCWC	3 cut(s)	1002, 1171, 1412
BbvI	GCAGC	1 cut(s)	2317
BccI	CCATC	6 cut(s)	238, 466, 914, 1318, 1427, 2343
BceAI	ACGGC	1 cut(s)	374
BcgI	CGANNNNNNTGC	6 cut(s)	964, 998, 1343, 1377, 2319, 2353
BciT130I	CCWGG	2 cut(s)	34, 44
BclI	TGATCA	1 cut(s)	2124
BcoDI	GTCTC	6 cut(s)	973, 1134, 1444, 1486, 2170, 2293
BfaI	CTAG	3 cut(s)	338, 1151, 1551
BfmI	CTRYAG	1 cut(s)	1237
BfuAI	ACCTGC	1 cut(s)	203
BisI	GCNGC	1 cut(s)	2306
BlsI	GCNGC	1 cut(s)	2307
Bme1390I	CCNGG	2 cut(s)	34, 44
Bme18I	GGWCC	6 cut(s)	227, 923, 1717, 1785, 1916, 2139
BmeRI	GACNNNNNGTC	1 cut(s)	233
BmgBI	CACGTC	1 cut(s)	538
BmgT120I	GGNCC	9 cut(s)	227, 871, 890, 891, 923, 1717, 1785, 1916, 2139
BmiI	GGNNCC	5 cut(s)	228, 891, 892, 1107, 1849
BmrFI	CCNGG	2 cut(s)	34, 44
BmrI	ACTGGG	1 cut(s)	233
BmsI	GCATC	3 cut(s)	1185, 1972, 2273
BmuI	ACTGGG	1 cut(s)	233
BpiI	GAAGAC	2 cut(s)	594, 1046
Bpu10I	CCTNAGC	1 cut(s)	524
Bpu14I	TTCGAA	2 cut(s)	1378, 1807
BpuEI	CTTGAG	1 cut(s)	1155
Bsa29I	ATCGAT	3 cut(s)	974, 1137, 2339
BsaAI	YACGTR	1 cut(s)	121
BsaBI	GATNNNNATC	2 cut(s)	500, 564
BsaHI	GRCGYC	1 cut(s)	2179
BsaI	GGTCTC	1 cut(s)	2293
BsaJI	CCNNGG	3 cut(s)	33, 390, 1713
BsaWI	WCCGGW	2 cut(s)	1565, 2233
BsaXI	ACNNNNNCTCC	2 cut(s)	1537, 1567
Bsc4I	CCNNNNNNNGG	7 cut(s)	577, 704, 705, 932, 1338, 2167, 2240
Bse1I	ACTGG	2 cut(s)	228, 1009
Bse3DI	GCAATG	4 cut(s)	256, 1372, 1650, 1953
Bse8I	GATNNNNATC	2 cut(s)	500, 564
BseAI	TCCGGA	1 cut(s)	2233
BseBI	CCWGG	2 cut(s)	34, 44
BseCI	ATCGAT	3 cut(s)	974, 1137, 2339
BseDI	CCNNGG	3 cut(s)	33, 390, 1713
BseGI	GGATG	3 cut(s)	729, 1310, 1963
BseJI	GATNNNNATC	2 cut(s)	500, 564
BseLI	CCNNNNNNNGG	7 cut(s)	577, 704, 705, 932, 1338, 2167, 2240
BseMI	GCAATG	4 cut(s)	256, 1372, 1650, 1953
BseMII	CTCAG	3 cut(s)	1587, 1836, 2059
BseNI	ACTGG	2 cut(s)	228, 1009
BseRI	GAGGAG	2 cut(s)	560, 1826
BseSI	GKGCMC	1 cut(s)	894
BseXI	GCAGC	1 cut(s)	2317
BsgI	GTGCAG	1 cut(s)	2324
Bsh1236I	CGCG	2 cut(s)	470, 509
Bsh1285I	CGRYCG	1 cut(s)	1843
BshFI	GGCC	7 cut(s)	183, 402, 557, 650, 754, 873, 892
BshNI	GGYRCC	2 cut(s)	1105, 1847
BshVI	ATCGAT	3 cut(s)	974, 1137, 2339
BsiEI	CGRYCG	1 cut(s)	1843
BsiHKAI	GWGCWC	3 cut(s)	1002, 1171, 1412
BsiSI	CCGG	3 cut(s)	1500, 1566, 2234
BslFI	GGGAC	3 cut(s)	240, 404, 2223
BslI	CCNNNNNNNGG	7 cut(s)	577, 704, 705, 932, 1338, 2167, 2240
BsmAI	GTCTC	6 cut(s)	973, 1134, 1444, 1486, 2170, 2293
BsmBI	CGTCTC	2 cut(s)	973, 2170
BsmFI	GGGAC	3 cut(s)	240, 404, 2223
BsmI	GAATGC	1 cut(s)	1642
BsnI	GGCC	7 cut(s)	183, 402, 557, 650, 754, 873, 892
Bso31I	GGTCTC	1 cut(s)	2293
Bsp119I	TTCGAA	2 cut(s)	1378, 1807
Bsp120I	GGGCCC	1 cut(s)	890
Bsp1286I	GDGCHC	4 cut(s)	894, 1002, 1171, 1412
Bsp13I	TCCGGA	1 cut(s)	2233
Bsp1407I	TGTACA	2 cut(s)	1302, 1887
Bsp19I	CCATGG	1 cut(s)	1713
Bsp68I	TCGCGA	1 cut(s)	470
BspACI	CCGC	4 cut(s)	150, 509, 1509, 1958
BspANI	GGCC	7 cut(s)	183, 402, 557, 650, 754, 873, 892
BspCNI	CTCAG	3 cut(s)	1586, 1835, 2058
BspDI	ATCGAT	3 cut(s)	974, 1137, 2339
BspEI	TCCGGA	1 cut(s)	2233
BspFNI	CGCG	2 cut(s)	470, 509
BspHI	TCATGA	1 cut(s)	1161
BspLI	GGNNCC	5 cut(s)	228, 891, 892, 1107, 1849
BspMI	ACCTGC	1 cut(s)	203
BspPI	GGATC	6 cut(s)	250, 421, 693, 792, 943, 2344
BspT104I	TTCGAA	2 cut(s)	1378, 1807
BspT107I	GGYRCC	2 cut(s)	1105, 1847
BspTNI	GGTCTC	1 cut(s)	2293
BsrDI	GCAATG	4 cut(s)	256, 1372, 1650, 1953
BsrGI	TGTACA	2 cut(s)	1302, 1887
BsrI	ACTGG	2 cut(s)	228, 1009
BssECI	CCNNGG	3 cut(s)	33, 390, 1713
BssNI	GRCGYC	1 cut(s)	2179
BssSI	CACGAG	1 cut(s)	1487
BssT1I	CCWWGG	1 cut(s)	1713
Bst2BI	CACGAG	1 cut(s)	1487
Bst2UI	CCWGG	2 cut(s)	34, 44
Bst4CI	ACNGT	6 cut(s)	466, 613, 1045, 1102, 1928, 1984
Bst6I	CTCTTC	2 cut(s)	338, 1398
BstACI	GRCGYC	1 cut(s)	2179
BstAUI	TGTACA	2 cut(s)	1302, 1887
BstBAI	YACGTR	1 cut(s)	121
BstBI	TTCGAA	2 cut(s)	1378, 1807
BstC8I	GCNNGC	5 cut(s)	210, 547, 875, 1356, 1390
BstDEI	CTNAG	7 cut(s)	238, 524, 689, 1573, 1751, 1822, 2045
BstDSI	CCRYGG	2 cut(s)	390, 1713
BstF5I	GGATG	3 cut(s)	729, 1310, 1963
BstFNI	CGCG	2 cut(s)	470, 509
BstHHI	GCGC	1 cut(s)	1953
BstMAI	GTCTC	6 cut(s)	973, 1134, 1444, 1486, 2170, 2293
BstMCI	CGRYCG	1 cut(s)	1843
BstMWI	GCNNNNNNNGC	3 cut(s)	1256, 1646, 1661
BstNI	CCWGG	2 cut(s)	34, 44
BstNSI	RCATGY	2 cut(s)	1358, 2087
BstSCI	CCNGG	2 cut(s)	32, 42
BstSFI	CTRYAG	1 cut(s)	1237
BstSLI	GKGCMC	1 cut(s)	894
BstSNI	TACGTA	1 cut(s)	121
BstUI	CGCG	2 cut(s)	470, 509
BstV1I	GCAGC	1 cut(s)	2317
BstV2I	GAAGAC	2 cut(s)	594, 1046
BstX2I	RGATCY	2 cut(s)	685, 797
BstYI	RGATCY	2 cut(s)	685, 797
Bsu15I	ATCGAT	3 cut(s)	974, 1137, 2339
BsuRI	GGCC	7 cut(s)	183, 402, 557, 650, 754, 873, 892
BsuTUI	ATCGAT	3 cut(s)	974, 1137, 2339
BtgI	CCRYGG	2 cut(s)	390, 1713
BtgZI	GCGATG	3 cut(s)	485, 490, 526
BtrI	CACGTC	1 cut(s)	538
BtsCI	GGATG	3 cut(s)	729, 1310, 1963
BtsI	GCAGTG	2 cut(s)	918, 2020
BtsIMutI	CAGTG	5 cut(s)	275, 622, 918, 1002, 2020
BtuMI	TCGCGA	1 cut(s)	470
BveI	ACCTGC	1 cut(s)	203
Cac8I	GCNNGC	5 cut(s)	210, 547, 875, 1356, 1390
CciI	TCATGA	1 cut(s)	1161
CfoI	GCGC	1 cut(s)	1953
Cfr13I	GGNCC	9 cut(s)	227, 871, 890, 891, 923, 1717, 1785, 1916, 2139
ClaI	ATCGAT	3 cut(s)	974, 1137, 2339
CseI	GACGC	1 cut(s)	2187
Csp6I	GTAC	5 cut(s)	122, 1303, 1554, 1848, 1888
CviQI	GTAC	5 cut(s)	122, 1303, 1554, 1848, 1888
DdeI	CTNAG	7 cut(s)	238, 524, 689, 1573, 1751, 1822, 2045
DraI	TTTAAA	1 cut(s)	96
DraIII	CACNNNGTG	1 cut(s)	1489
DrdI	GACNNNNNNGTC	1 cut(s)	965
DriI	GACNNNNNGTC	1 cut(s)	233
DseDI	GACNNNNNNGTC	1 cut(s)	965
EaeI	YGGCCR	2 cut(s)	181, 555
Eam1104I	CTCTTC	2 cut(s)	338, 1398
Eam1105I	GACNNNNNGTC	1 cut(s)	233
EarI	CTCTTC	2 cut(s)	338, 1398
EciI	GGCGGA	1 cut(s)	1973
Eco105I	TACGTA	1 cut(s)	121
Eco130I	CCWWGG	1 cut(s)	1713
Eco147I	AGGCCT	2 cut(s)	402, 754
Eco24I	GRGCYC	1 cut(s)	894
Eco31I	GGTCTC	1 cut(s)	2293
Eco47I	GGWCC	6 cut(s)	227, 923, 1717, 1785, 1916, 2139
Eco57I	CTGAAG	2 cut(s)	1579, 2253
EcoO109I	RGGNCCY	2 cut(s)	890, 1916
EcoRI	GAATTC	1 cut(s)	1380
EcoRII	CCWGG	2 cut(s)	32, 42
EcoT14I	CCWWGG	1 cut(s)	1713
EcoT22I	ATGCAT	4 cut(s)	19, 1207, 1642, 1674
EcoT38I	GRGCYC	1 cut(s)	894
ErhI	CCWWGG	1 cut(s)	1713
Esp3I	CGTCTC	2 cut(s)	973, 2170
FaqI	GGGAC	3 cut(s)	240, 404, 2223
FauNDI	CATATG	2 cut(s)	1466, 1942
FbaI	TGATCA	1 cut(s)	2124
FblI	GTMKAC	2 cut(s)	694, 741
Fnu4HI	GCNGC	1 cut(s)	2306
FokI	GGATG	3 cut(s)	716, 1297, 1950
FriOI	GRGCYC	1 cut(s)	894
Fsp4HI	GCNGC	1 cut(s)	2306
FspAI	RTGCGCAY	1 cut(s)	1952
FspBI	CTAG	3 cut(s)	338, 1151, 1551
FspI	TGCGCA	1 cut(s)	1952
GlaI	GCGC	1 cut(s)	1952
GluI	GCNGC	1 cut(s)	2306
HaeIII	GGCC	7 cut(s)	183, 402, 557, 650, 754, 873, 892
HapII	CCGG	3 cut(s)	1500, 1566, 2234
HgaI	GACGC	1 cut(s)	2187
HhaI	GCGC	1 cut(s)	1953
Hin1I	GRCGYC	1 cut(s)	2179
Hin6I	GCGC	1 cut(s)	1951
HinP1I	GCGC	1 cut(s)	1951
HindIII	AAGCTT	1 cut(s)	283
HpaII	CCGG	3 cut(s)	1500, 1566, 2234
HphI	GGTGA	5 cut(s)	95, 379, 872, 1273, 2187
Hpy166II	GTNNAC	8 cut(s)	695, 742, 1088, 1329, 1483, 1625, 2089, 2119
Hpy188I	TCNGA	8 cut(s)	30, 51, 580, 1576, 1581, 1598, 1774, 2272
Hpy188III	TCNNGA	7 cut(s)	60, 378, 469, 1162, 1433, 1489, 2234
Hpy8I	GTNNAC	8 cut(s)	695, 742, 1088, 1329, 1483, 1625, 2089, 2119
HpyAV	CCTTC	8 cut(s)	375, 661, 1119, 1332, 1425, 1439, 1603, 1907
HpyCH4III	ACNGT	6 cut(s)	466, 613, 1045, 1102, 1928, 1984
HpyCH4IV	ACGT	5 cut(s)	120, 537, 966, 1185, 2101
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1256, 1646, 1661
HpyF3I	CTNAG	7 cut(s)	238, 524, 689, 1573, 1751, 1822, 2045
HpySE526I	ACGT	5 cut(s)	120, 537, 966, 1185, 2101
Hsp92I	GRCGYC	1 cut(s)	2179
HspAI	GCGC	1 cut(s)	1951
Kpn2I	TCCGGA	1 cut(s)	2233
KpnI	GGTACC	1 cut(s)	1851
Ksp22I	TGATCA	1 cut(s)	2124
LmnI	GCTCC	3 cut(s)	1057, 1960, 2038
Lsp1109I	GCAGC	1 cut(s)	2317
LweI	GCATC	3 cut(s)	1185, 1972, 2273
MaeI	CTAG	3 cut(s)	338, 1151, 1551
MaeII	ACGT	5 cut(s)	120, 537, 966, 1185, 2101
MaeIII	GTNAC	2 cut(s)	1209, 1568
MfeI	CAATTG	2 cut(s)	1347, 2278
MflI	RGATCY	2 cut(s)	685, 797
MhlI	GDGCHC	4 cut(s)	894, 1002, 1171, 1412
MlsI	TGGCCA	1 cut(s)	183
MluNI	TGGCCA	1 cut(s)	183
MlyI	GAGTC	3 cut(s)	953, 1527, 2205
MmeI	TCCRAC	4 cut(s)	322, 1467, 2299, 2314
Mox20I	TGGCCA	1 cut(s)	183
Mph1103I	ATGCAT	4 cut(s)	19, 1207, 1642, 1674
MroI	TCCGGA	1 cut(s)	2233
MscI	TGGCCA	1 cut(s)	183
MseI	TTAA	5 cut(s)	95, 348, 1017, 1268, 2106
MslI	CAYNNNNRTG	5 cut(s)	509, 839, 1677, 1968, 2187
Msp20I	TGGCCA	1 cut(s)	183
MspI	CCGG	3 cut(s)	1500, 1566, 2234
MspR9I	CCNGG	2 cut(s)	34, 44
MunI	CAATTG	2 cut(s)	1347, 2278
Mva1269I	GAATGC	1 cut(s)	1642
MvaI	CCWGG	2 cut(s)	34, 44
MvnI	CGCG	2 cut(s)	470, 509
MwoI	GCNNNNNNNGC	3 cut(s)	1256, 1646, 1661
NcoI	CCATGG	1 cut(s)	1713
NdeI	CATATG	2 cut(s)	1466, 1942
NlaIV	GGNNCC	5 cut(s)	228, 891, 892, 1107, 1849
NmeAIII	GCCGAG	2 cut(s)	1011, 1396
NruI	TCGCGA	1 cut(s)	470
NsbI	TGCGCA	1 cut(s)	1952
NsiI	ATGCAT	4 cut(s)	19, 1207, 1642, 1674
NspI	RCATGY	2 cut(s)	1358, 2087
NspV	TTCGAA	2 cut(s)	1378, 1807
OliI	CACNNNNGTG	1 cut(s)	2187
PaeI	GCATGC	1 cut(s)	1358
PagI	TCATGA	1 cut(s)	1161
PceI	AGGCCT	2 cut(s)	402, 754
PciI	ACATGT	1 cut(s)	2083
PctI	GAATGC	1 cut(s)	1642
PfeI	GAWTC	7 cut(s)	565, 976, 1139, 1792, 1831, 2192, 2273
PkrI	GCNGC	1 cut(s)	2307
Ple19I	CGATCG	1 cut(s)	1843
PleI	GAGTC	3 cut(s)	953, 1527, 2205
PpsI	GAGTC	3 cut(s)	953, 1527, 2205
Ppu21I	YACGTR	1 cut(s)	121
PpuMI	RGGWCCY	1 cut(s)	1916
PscI	ACATGT	1 cut(s)	2083
PshBI	ATTAAT	1 cut(s)	1017
PsiI	TTATAA	3 cut(s)	884, 1190, 1631
Psp5II	RGGWCCY	1 cut(s)	1916
Psp6I	CCWGG	2 cut(s)	32, 42
PspGI	CCWGG	2 cut(s)	32, 42
PspN4I	GGNNCC	5 cut(s)	228, 891, 892, 1107, 1849
PspOMI	GGGCCC	1 cut(s)	890
PspPI	GGNCC	9 cut(s)	227, 871, 890, 891, 923, 1717, 1785, 1916, 2139
PspPPI	RGGWCCY	1 cut(s)	1916
PsrI	GAACNNNNNNTAC	2 cut(s)	30, 62
PsuI	RGATCY	2 cut(s)	685, 797
PvuI	CGATCG	1 cut(s)	1843
RruI	TCGCGA	1 cut(s)	470
RsaI	GTAC	5 cut(s)	123, 1304, 1555, 1849, 1889
RsaNI	GTAC	5 cut(s)	122, 1303, 1554, 1848, 1888
RseI	CAYNNNNRTG	5 cut(s)	509, 839, 1677, 1968, 2187
SaqAI	TTAA	5 cut(s)	95, 348, 1017, 1268, 2106
SatI	GCNGC	1 cut(s)	2306
Sau96I	GGNCC	9 cut(s)	227, 871, 890, 891, 923, 1717, 1785, 1916, 2139
SchI	GAGTC	3 cut(s)	953, 1527, 2205
ScrFI	CCNGG	2 cut(s)	34, 44
SduI	GDGCHC	4 cut(s)	894, 1002, 1171, 1412
SfaNI	GCATC	3 cut(s)	1185, 1972, 2273
SfcI	CTRYAG	1 cut(s)	1237
SfuI	TTCGAA	2 cut(s)	1378, 1807
SinI	GGWCC	6 cut(s)	227, 923, 1717, 1785, 1916, 2139
SmiMI	CAYNNNNRTG	5 cut(s)	509, 839, 1677, 1968, 2187
SmlI	CTYRAG	1 cut(s)	1170
SmoI	CTYRAG	1 cut(s)	1170
SnaBI	TACGTA	1 cut(s)	121
SphI	GCATGC	1 cut(s)	1358
SseBI	AGGCCT	2 cut(s)	402, 754
SsiI	CCGC	4 cut(s)	150, 509, 1509, 1958
SspI	AATATT	1 cut(s)	1894
SspMI	CTAG	3 cut(s)	338, 1151, 1551
StuI	AGGCCT	2 cut(s)	402, 754
StyD4I	CCNGG	2 cut(s)	32, 42
StyI	CCWWGG	1 cut(s)	1713
TaaI	ACNGT	6 cut(s)	466, 613, 1045, 1102, 1928, 1984
TaiI	ACGT	5 cut(s)	123, 540, 969, 1188, 2104
TaqI	TCGA	9 cut(s)	494, 974, 1137, 1378, 1531, 1536, 1807, 1839, 2339
TatI	WGTACW	3 cut(s)	1302, 1553, 1887
TfiI	GAWTC	7 cut(s)	565, 976, 1139, 1792, 1831, 2192, 2273
Tru1I	TTAA	5 cut(s)	95, 348, 1017, 1268, 2106
Tru9I	TTAA	5 cut(s)	95, 348, 1017, 1268, 2106
TscAI	CASTG	5 cut(s)	282, 622, 918, 1009, 2020
TseI	GCWGC	1 cut(s)	2305
TspGWI	ACGGA	1 cut(s)	1777
TspRI	CASTG	5 cut(s)	282, 622, 918, 1009, 2020
VpaK11BI	GGWCC	6 cut(s)	227, 923, 1717, 1785, 1916, 2139
VspI	ATTAAT	1 cut(s)	1017
XapI	RAATTY	6 cut(s)	1192, 1380, 1810, 1881, 2149, 2323
XceI	RCATGY	2 cut(s)	1358, 2087
XmiI	GTMKAC	2 cut(s)	694, 741
XspI	CTAG	3 cut(s)	338, 1151, 1551
Zsp2I	ATGCAT	4 cut(s)	19, 1207, 1642, 1674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.