pycom11g18890

Rab3 GTPase-activating protein catalytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0004994
Physical Location & Seq
Reverse (-)
21128860 .. 21135413
6554 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2235 bp
ATGATTTTCTCTCTCACTCTGTACACAAATGCCATTTTCTTCCCCACATCTCTCGACAGCTACAGACTTGTACTCCTCCCTTGGTGCAGCAATAGTAGTCACAGTGAGTTCTTAACCTGCGCACCCCCGGCGCAGGATATGGAGCCGCCCTCCTTTGTATCCAAAGCGAGGACCGCCTTCCATTCCGCGGCGGCTAAAGCGGAGCGAGTTCTCTCTGACTTAAAGCCCGATCGAGATTCTGACAAGGAATCGCCGAGGAATTCGATCGATTACGCAGGTTACGAATCGCCGAGGGAGGAGGGAGAGTCCAAGTTGCTTGGGAATGAAATAATACAGGGCTCGAAAGAATCGAAGCATCTTGGGTGGAGACCACCGAACATAGGGACAAAGCAAGATTGGCAGGATAGATTTAGGAACATTGGACTAGGGAAGAAAGGAGGTGAAGATACTGAGAAGGCTGAGTATTCTTCCATGGCAGTCCCGTTTTATGATGAAAATATGTATTTGCTGAACATGAAAAACGATACTGAAGCAAAGGGGGCAGAGATGATTCCATCAGTTGAAAGCTTAGTCTCAGACAACATTCTGATTCCTCCGTTATCTGTTATGAGACAATTGGCTATAGCTGTTGAGGCTGGAAAGAAGTCCAAGTCATTGAAAGATTTTTTGGCGTCATCAGGGAGTTCCTCACCTGTCAGGGAGAGAGCGGGTCTGAGTCTATCTGCAGTGAAGTCATTAATGCTTCGTGAAAAGGATGAAAAGCCATCTGATTTTGTTAATAACGAGAAGGTCCTAGCGTTGATTCGGTCTCTATTTGATGCAGAGGGGAATTTTCTGAGATGGAAGATTGATTCTGGTTCAGAGGCAGTTACCCCAGCATCTTTGCCTAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGTTAGCTGAAGTCATTGGGAGCTTCAGAACCCTCAAGAAAATGACTCTGTTTTGGTGCAGAGTTGTTGTTGAACTGAGAAGACTTTGGTCTGAAGAACAATATGTGCCTAGCATCCCCTTGGATGAGATTCCAGATCTGAATTCCTGTCTTTTGTACCAGCGGTTGCAAGTGATGAACTGTTGTGTTTCTAGGAAAAGGCGTCATGATATCGCCACTGAAAAATTAGACCTTGTAATAAGGGAAGCTAGTCTACATACAGAAGAATCCGCTCTTTCCAAAGACAATCCTGCAGGCCCTATTTTGTATGCTAGATTAAGCACTGGGGAACTTGTCCTCCGACTAGGTGCTAGTAGCCCATCCGGCGACCTAACAATGTTGGAAACTGGTGAACCTGTGTACTCCCCTGTGACCCAGGAAGGACCTTTGCTTACTGAAGATCTTATCAAAGAAAATGAGGAGTTTGTGCTTCGAACAGGAAGTGTTGGTGCTGGATGTTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGACTTTGTGAGATGGCACTCCCCTCCTGACTGGACAGAGACTGAGCCAAGTGATGAGGAAAATGACTCTTTTGTTGGTATTGACGTATTGTCCACACGGGGCTATCTCAGTAGCCGAATGCAAAAAGAAGGCAATTTGTGGCGTGAGTTTTGGGATACATCCAAACCAGTTCCAGCAGTTAAACAAGCACCCCTCTTTGATGAGGATTTAGCAGTGGAAGGTATCCTGGATGGTTTAGAGGACATATCACCTTCCGAGCTTTTTCAGCAGCTGTTTGTTTCTTTGCTTGGTTTAGGATTTGTAATTGCTGAGGCTAAACTGTCCACGAGCAGTGATTTTTCGAAGCTGTTTTATGAATGCAAGGAATATGTTGTTTCCTCTTGTCAAAGCAGCACCTGGACTGAGAAGGTTGAAGAGCTTTGCCAGGTATATGAAACAGTGGAGACTATGTTACTCAATCCAGAGGAAGCATTAAGAGCAATGAATCAGCCAGACGAATCGACAACCCCTTCTGGCGAACCAAAACGGCGGTTTAGGAGGCTTACCCTCAACTTTGGTGGCAAAGACAAGCAGTTGAGAAAAACTGCATCAAAGGACCCGAAAAACTCAACAAGCCCCGGTAGCCAACCGTTTTCGAGTTTCTTCGACAACAAGTCATCATTATTTTCCAAAAAGCCTCCCAAGCCGGAAAATACATCTCCTGTTGAAAAACCTTCGAATACAGTTGAAAATGATTGGACAGTTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD Rab3-GTPase_cat

Protein Analysis

745

Amino Acids

82.89

Weight (kDa)

5.02

Isoelectric Point (pI)

52.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rab3-GTPase_cat PF13890 423 - 575 3.5e-50 Rab3 GTPase-activating protein catalytic subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 121
Acc36I ACCTGC 2 cut(s) 125, 266
AccBSI CCGCTC 2 cut(s) 707, 1199
AccI GTMKAC 1 cut(s) 1180
AccII CGCG 1 cut(s) 188
AcsI RAATTY 3 cut(s) 259, 829, 1069
AcuI CTGAAG 5 cut(s) 549, 937, 957, 1041, 1383
AcyI GRCGYC 2 cut(s) 671, 1129
AfaI GTAC 4 cut(s) 23, 72, 1085, 1328
AfiI CCNNNNNNNGG 4 cut(s) 133, 168, 187, 380
AgsI TTSAA 7 cut(s) 563, 658, 1001, 1456, 1898, 2192, 2213
AhdI GACNNNNNGTC 2 cut(s) 1573, 2137
AjnI CCWGG 5 cut(s) 1341, 1468, 1710, 1880, 1908
AjuI GAANNNNNNNTTGG 2 cut(s) 650, 682
AloI GAACNNNNNNTCC 2 cut(s) 1248, 1280
Alw21I GWGCWC 1 cut(s) 907
Alw26I GTCTC 6 cut(s) 361, 577, 604, 813, 1517, 1922
AlwNI CAGNNNCTG 3 cut(s) 1526, 1756, 1881
AoxI GGCC 1 cut(s) 1222
ApeKI GCWGC 4 cut(s) 87, 1460, 1753, 1875
ApoI RAATTY 3 cut(s) 259, 829, 1069
AseI ATTAAT 1 cut(s) 737
AspLEI GCGC 2 cut(s) 122, 133
AspS9I GGNCC 5 cut(s) 171, 790, 1223, 1349, 2080
AsuC2I CCSGG 2 cut(s) 128, 2103
AsuHPI GGTGA 4 cut(s) 452, 681, 1328, 1725
AsuII TTCGAA 3 cut(s) 1399, 1826, 2201
AvaII GGWCC 4 cut(s) 171, 790, 1349, 2080
BanII GRGCYC 1 cut(s) 341
BarI GAAGNNNNNNTAC 2 cut(s) 1164, 1196
BauI CACGAG 1 cut(s) 1810
BbsI GAAGAC 2 cut(s) 1015, 1491
Bbv12I GWGCWC 1 cut(s) 907
BbvCI CCTCAGC 1 cut(s) 1794
BbvI GCAGC 4 cut(s) 99, 1447, 1765, 1887
BccI CCATC 6 cut(s) 562, 772, 834, 1294, 1491, 1709
BceAI ACGGC 1 cut(s) 2027
BciT130I CCWGG 5 cut(s) 1343, 1470, 1712, 1882, 1910
BciVI GTATCC 3 cut(s) 169, 1633, 1718
BcnI CCSGG 2 cut(s) 128, 2103
BcoDI GTCTC 6 cut(s) 361, 577, 604, 813, 1517, 1922
BfaI CTAG 9 cut(s) 425, 794, 888, 1038, 1119, 1176, 1239, 1271, 1278
BfmI CTRYAG 4 cut(s) 61, 621, 723, 1218
BfuAI ACCTGC 2 cut(s) 125, 266
BfuI GTATCC 3 cut(s) 169, 1633, 1718
BglI GCCNNNNNGGC 1 cut(s) 1290
BglII AGATCT 2 cut(s) 1063, 1366
BisI GCNGC 7 cut(s) 88, 146, 189, 192, 1461, 1754, 1876
BlsI GCNGC 7 cut(s) 89, 147, 190, 193, 1462, 1755, 1877
Bme1390I CCNGG 7 cut(s) 128, 1343, 1470, 1712, 1882, 1910, 2103
Bme18I GGWCC 4 cut(s) 171, 790, 1349, 2080
BmeRI GACNNNNNGTC 2 cut(s) 1573, 2137
BmgT120I GGNCC 5 cut(s) 171, 790, 1223, 1349, 2080
BmiI GGNNCC 2 cut(s) 144, 2082
BmrFI CCNGG 7 cut(s) 128, 1343, 1470, 1712, 1882, 1910, 2103
BmrI ACTGGG 1 cut(s) 1260
BmsI GCATC 5 cut(s) 364, 808, 887, 1050, 2081
BmuI ACTGGG 1 cut(s) 1260
BoxI GACNNNNGTC 1 cut(s) 1015
BpiI GAAGAC 2 cut(s) 1015, 1491
BplI GAGNNNNNCTC 2 cut(s) 134, 166
Bpu10I CCTNAGC 1 cut(s) 1794
Bpu14I TTCGAA 3 cut(s) 1399, 1826, 2201
BpuEI CTTGAG 1 cut(s) 947
BpuMI CCSGG 2 cut(s) 128, 2103
Bsa29I ATCGAT 1 cut(s) 267
BsaHI GRCGYC 2 cut(s) 671, 1129
BsaI GGTCTC 2 cut(s) 361, 813
BsaJI CCNNGG 9 cut(s) 80, 126, 186, 254, 290, 471, 1047, 1341, 2101
BsaXI ACNNNNNCTCC 8 cut(s) 57, 87, 290, 320, 1248, 1278, 1919, 1949
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 168, 187, 380
Bse1I ACTGG 4 cut(s) 1255, 1318, 1520, 1652
Bse3DI GCAATG 1 cut(s) 1971
BseBI CCWGG 5 cut(s) 1343, 1470, 1712, 1882, 1910
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 9 cut(s) 80, 126, 186, 254, 290, 471, 1047, 1341, 2101
BseGI GGATG 7 cut(s) 760, 1041, 1057, 1286, 1427, 1643, 1720
BseLI CCNNNNNNNGG 4 cut(s) 133, 168, 187, 380
BseMI GCAATG 1 cut(s) 1971
BseNI ACTGG 4 cut(s) 1255, 1318, 1520, 1652
BseRI GAGGAG 5 cut(s) 65, 311, 897, 1400, 1424
BseXI GCAGC 4 cut(s) 99, 1447, 1765, 1887
BseYI CCCAGC 1 cut(s) 874
BsgI GTGCAG 2 cut(s) 106, 1006
Bsh1236I CGCG 1 cut(s) 188
Bsh1285I CGRYCG 2 cut(s) 232, 267
BshFI GGCC 1 cut(s) 1224
BshVI ATCGAT 1 cut(s) 267
BsiEI CGRYCG 2 cut(s) 232, 267
BsiHKAI GWGCWC 1 cut(s) 907
BsiSI CCGG 4 cut(s) 128, 1290, 2103, 2171
BslFI GGGAC 2 cut(s) 397, 464
BslI CCNNNNNNNGG 4 cut(s) 133, 168, 187, 380
BsmAI GTCTC 6 cut(s) 361, 577, 604, 813, 1517, 1922
BsmFI GGGAC 2 cut(s) 397, 464
BsmI GAATGC 2 cut(s) 1608, 1847
BsnI GGCC 1 cut(s) 1224
Bso31I GGTCTC 2 cut(s) 361, 813
Bsp119I TTCGAA 3 cut(s) 1399, 1826, 2201
Bsp1286I GDGCHC 2 cut(s) 341, 907
Bsp1407I TGTACA 1 cut(s) 21
Bsp143I GATC 4 cut(s) 229, 264, 1063, 1366
Bsp19I CCATGG 1 cut(s) 471
BspANI GGCC 1 cut(s) 1224
BspDI ATCGAT 1 cut(s) 267
BspFNI CGCG 1 cut(s) 188
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 2 cut(s) 144, 2082
BspMAI CTGCAG 2 cut(s) 727, 1222
BspMI ACCTGC 2 cut(s) 125, 266
BspQI GCTCTTC 1 cut(s) 1893
BspT104I TTCGAA 3 cut(s) 1399, 1826, 2201
BspTNI GGTCTC 2 cut(s) 361, 813
BsrBI CCGCTC 2 cut(s) 707, 1199
BsrDI GCAATG 1 cut(s) 1971
BsrGI TGTACA 1 cut(s) 21
BsrI ACTGG 4 cut(s) 1255, 1318, 1520, 1652
BssECI CCNNGG 9 cut(s) 80, 126, 186, 254, 290, 471, 1047, 1341, 2101
BssMI GATC 4 cut(s) 229, 264, 1063, 1366
BssNI GRCGYC 2 cut(s) 671, 1129
BssSI CACGAG 1 cut(s) 1810
BssT1I CCWWGG 3 cut(s) 80, 471, 1047
Bst2BI CACGAG 1 cut(s) 1810
Bst2UI CCWGG 5 cut(s) 1343, 1470, 1712, 1882, 1910
Bst4CI ACNGT 7 cut(s) 104, 1109, 1806, 1924, 2115, 2209, 2227
Bst6I CTCTTC 1 cut(s) 1893
BstACI GRCGYC 2 cut(s) 671, 1129
BstAUI TGTACA 1 cut(s) 21
BstBI TTCGAA 3 cut(s) 1399, 1826, 2201
BstC8I GCNNGC 2 cut(s) 1222, 1449
BstDSI CCRYGG 2 cut(s) 186, 471
BstF5I GGATG 7 cut(s) 760, 1041, 1057, 1286, 1427, 1643, 1720
BstFNI CGCG 1 cut(s) 188
BstHHI GCGC 2 cut(s) 122, 133
BstKTI GATC 4 cut(s) 232, 267, 1066, 1369
BstMAI GTCTC 6 cut(s) 361, 577, 604, 813, 1517, 1922
BstMBI GATC 4 cut(s) 229, 264, 1063, 1366
BstMCI CGRYCG 2 cut(s) 232, 267
BstNI CCWGG 5 cut(s) 1343, 1470, 1712, 1882, 1910
BstNSI RCATGY 1 cut(s) 1447
BstPAI GACNNNNGTC 1 cut(s) 1015
BstSCI CCNGG 7 cut(s) 126, 1341, 1468, 1710, 1880, 1908, 2101
BstSFI CTRYAG 4 cut(s) 61, 621, 723, 1218
BstUI CGCG 1 cut(s) 188
BstV1I GCAGC 4 cut(s) 99, 1447, 1765, 1887
BstV2I GAAGAC 2 cut(s) 1015, 1491
BstX2I RGATCY 2 cut(s) 1063, 1366
BstYI RGATCY 2 cut(s) 1063, 1366
Bsu15I ATCGAT 1 cut(s) 267
BsuI GTATCC 3 cut(s) 169, 1633, 1718
BsuRI GGCC 1 cut(s) 1224
BsuTUI ATCGAT 1 cut(s) 267
BtgI CCRYGG 2 cut(s) 186, 471
BtsCI GGATG 7 cut(s) 760, 1041, 1057, 1286, 1427, 1643, 1720
BtsI GCAGTG 3 cut(s) 732, 1704, 1822
BtsIMutI CAGTG 7 cut(s) 109, 732, 1143, 1248, 1704, 1822, 1929
BveI ACCTGC 2 cut(s) 125, 266
Cac8I GCNNGC 2 cut(s) 1222, 1449
CaiI CAGNNNCTG 3 cut(s) 1526, 1756, 1881
CciI TCATGA 1 cut(s) 1132
CfoI GCGC 2 cut(s) 122, 133
Cfr13I GGNCC 5 cut(s) 171, 790, 1223, 1349, 2080
Cfr42I CCGCGG 1 cut(s) 189
ClaI ATCGAT 1 cut(s) 267
CseI GACGC 2 cut(s) 660, 1118
Csp6I GTAC 4 cut(s) 22, 71, 1084, 1327
CspCI CAANNNNNGTGG 2 cut(s) 2023, 2058
CviAII CATG 5 cut(s) 472, 514, 899, 1133, 1444
CviQI GTAC 4 cut(s) 22, 71, 1084, 1327
DpnI GATC 4 cut(s) 231, 266, 1065, 1368
DpnII GATC 4 cut(s) 229, 264, 1063, 1366
DriI GACNNNNNGTC 2 cut(s) 1573, 2137
Eam1104I CTCTTC 1 cut(s) 1893
Eam1105I GACNNNNNGTC 2 cut(s) 1573, 2137
EarI CTCTTC 1 cut(s) 1893
Eco130I CCWWGG 3 cut(s) 80, 471, 1047
Eco24I GRGCYC 1 cut(s) 341
Eco31I GGTCTC 2 cut(s) 361, 813
Eco32I GATATC 1 cut(s) 1138
Eco47I GGWCC 4 cut(s) 171, 790, 1349, 2080
Eco57I CTGAAG 5 cut(s) 549, 937, 957, 1041, 1383
EcoO109I RGGNCCY 4 cut(s) 790, 1223, 1349, 2080
EcoRI GAATTC 2 cut(s) 259, 1069
EcoRII CCWGG 5 cut(s) 1341, 1468, 1710, 1880, 1908
EcoRV GATATC 1 cut(s) 1138
EcoT14I CCWWGG 3 cut(s) 80, 471, 1047
EcoT38I GRGCYC 1 cut(s) 341
ErhI CCWWGG 3 cut(s) 80, 471, 1047
FaeI CATG 5 cut(s) 475, 517, 902, 1136, 1447
FaqI GGGAC 2 cut(s) 397, 464
FatI CATG 5 cut(s) 471, 513, 898, 1132, 1443
FauI CCCGC 1 cut(s) 700
FblI GTMKAC 1 cut(s) 1180
Fnu4HI GCNGC 7 cut(s) 88, 146, 189, 192, 1461, 1754, 1876
FokI GGATG 7 cut(s) 767, 1028, 1064, 1273, 1434, 1630, 1727
FriOI GRGCYC 1 cut(s) 341
Fsp4HI GCNGC 7 cut(s) 88, 146, 189, 192, 1461, 1754, 1876
FspBI CTAG 9 cut(s) 425, 794, 888, 1038, 1119, 1176, 1239, 1271, 1278
FspI TGCGCA 1 cut(s) 121
GlaI GCGC 2 cut(s) 121, 132
GluI GCNGC 7 cut(s) 88, 146, 189, 192, 1461, 1754, 1876
GsaI CCCAGC 1 cut(s) 878
HaeIII GGCC 1 cut(s) 1224
HapII CCGG 4 cut(s) 128, 1290, 2103, 2171
HgaI GACGC 2 cut(s) 660, 1118
HhaI GCGC 2 cut(s) 122, 133
Hin1I GRCGYC 2 cut(s) 671, 1129
Hin1II CATG 5 cut(s) 475, 517, 902, 1136, 1447
Hin6I GCGC 2 cut(s) 120, 131
HinP1I GCGC 2 cut(s) 120, 131
HindIII AAGCTT 1 cut(s) 565
HpaII CCGG 4 cut(s) 128, 1290, 2103, 2171
HphI GGTGA 4 cut(s) 452, 681, 1328, 1725
Hpy166II GTNNAC 6 cut(s) 24, 1181, 1319, 1327, 1578, 1809
Hpy188III TCNNGA 9 cut(s) 53, 233, 746, 911, 964, 1061, 1133, 1511, 1946
Hpy8I GTNNAC 6 cut(s) 24, 1181, 1319, 1327, 1578, 1809
HpyCH4III ACNGT 7 cut(s) 104, 1109, 1806, 1924, 2115, 2209, 2227
HpyCH4IV ACGT 1 cut(s) 1569
HpySE526I ACGT 1 cut(s) 1569
Hsp92I GRCGYC 2 cut(s) 671, 1129
Hsp92II CATG 5 cut(s) 475, 517, 902, 1136, 1447
HspAI GCGC 2 cut(s) 120, 131
KspI CCGCGG 1 cut(s) 189
Kzo9I GATC 4 cut(s) 229, 264, 1063, 1366
LguI GCTCTTC 1 cut(s) 1893
LmnI GCTCC 4 cut(s) 142, 202, 910, 948
Lsp1109I GCAGC 4 cut(s) 99, 1447, 1765, 1887
LweI GCATC 5 cut(s) 364, 808, 887, 1050, 2081
MaeI CTAG 9 cut(s) 425, 794, 888, 1038, 1119, 1176, 1239, 1271, 1278
MaeII ACGT 1 cut(s) 1569
MaeIII GTNAC 5 cut(s) 98, 278, 868, 1336, 1935
MalI GATC 4 cut(s) 231, 266, 1065, 1368
MbiI CCGCTC 2 cut(s) 707, 1199
MboI GATC 4 cut(s) 229, 264, 1063, 1366
MfeI CAATTG 1 cut(s) 614
MflI RGATCY 2 cut(s) 1063, 1366
MhlI GDGCHC 2 cut(s) 341, 907
MluCI AATT 7 cut(s) 259, 614, 829, 1069, 1151, 1618, 1788
MlyI GAGTC 4 cut(s) 314, 724, 967, 1544
MmeI TCCRAC 2 cut(s) 1287, 1291
MseI TTAA 9 cut(s) 113, 221, 737, 777, 927, 1244, 1665, 1958, 2233
MspA1I CMGCKG 3 cut(s) 188, 1090, 1756
MspI CCGG 4 cut(s) 128, 1290, 2103, 2171
MspR9I CCNGG 7 cut(s) 128, 1343, 1470, 1712, 1882, 1910, 2103
MunI CAATTG 1 cut(s) 614
Mva1269I GAATGC 2 cut(s) 1608, 1847
MvaI CCWGG 5 cut(s) 1343, 1470, 1712, 1882, 1910
MvnI CGCG 1 cut(s) 188
NciI CCSGG 2 cut(s) 128, 2103
NcoI CCATGG 1 cut(s) 471
NdeII GATC 4 cut(s) 229, 264, 1063, 1366
NlaIII CATG 5 cut(s) 475, 517, 902, 1136, 1447
NlaIV GGNNCC 2 cut(s) 144, 2082
NmeAIII GCCGAG 2 cut(s) 279, 315
NmuCI GTSAC 2 cut(s) 98, 1336
NsbI TGCGCA 1 cut(s) 121
NspI RCATGY 1 cut(s) 1447
NspV TTCGAA 3 cut(s) 1399, 1826, 2201
PagI TCATGA 1 cut(s) 1132
PciSI GCTCTTC 1 cut(s) 1893
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 347
PctI GAATGC 2 cut(s) 1608, 1847
PfoI TCCNGGA 1 cut(s) 1710
PkrI GCNGC 7 cut(s) 89, 147, 190, 193, 1462, 1755, 1877
Ple19I CGATCG 2 cut(s) 232, 267
PleI GAGTC 4 cut(s) 313, 723, 967, 1544
PpsI GAGTC 4 cut(s) 313, 723, 967, 1544
PpuMI RGGWCCY 3 cut(s) 790, 1349, 2080
PshAI GACNNNNGTC 1 cut(s) 1015
PshBI ATTAAT 1 cut(s) 737
Psp5II RGGWCCY 3 cut(s) 790, 1349, 2080
Psp6I CCWGG 5 cut(s) 1341, 1468, 1710, 1880, 1908
PspFI CCCAGC 1 cut(s) 874
PspGI CCWGG 5 cut(s) 1341, 1468, 1710, 1880, 1908
PspN4I GGNNCC 2 cut(s) 144, 2082
PspPI GGNCC 5 cut(s) 171, 790, 1223, 1349, 2080
PspPPI RGGWCCY 3 cut(s) 790, 1349, 2080
PstI CTGCAG 2 cut(s) 727, 1222
PstNI CAGNNNCTG 3 cut(s) 1526, 1756, 1881
PsuI RGATCY 2 cut(s) 1063, 1366
PvuI CGATCG 2 cut(s) 232, 267
PvuII CAGCTG 1 cut(s) 1756
RsaI GTAC 4 cut(s) 23, 72, 1085, 1328
RsaNI GTAC 4 cut(s) 22, 71, 1084, 1327
SacII CCGCGG 1 cut(s) 189
SapI GCTCTTC 1 cut(s) 1893
SaqAI TTAA 9 cut(s) 113, 221, 737, 777, 927, 1244, 1665, 1958, 2233
SatI GCNGC 7 cut(s) 88, 146, 189, 192, 1461, 1754, 1876
Sau3AI GATC 4 cut(s) 229, 264, 1063, 1366
Sau96I GGNCC 5 cut(s) 171, 790, 1223, 1349, 2080
SbfI CCTGCAGG 1 cut(s) 1222
SchI GAGTC 4 cut(s) 314, 724, 967, 1544
ScrFI CCNGG 7 cut(s) 128, 1343, 1470, 1712, 1882, 1910, 2103
SdaI CCTGCAGG 1 cut(s) 1222
SduI GDGCHC 2 cut(s) 341, 907
SfaNI GCATC 5 cut(s) 364, 808, 887, 1050, 2081
SfcI CTRYAG 4 cut(s) 61, 621, 723, 1218
Sfr303I CCGCGG 1 cut(s) 189
SfuI TTCGAA 3 cut(s) 1399, 1826, 2201
SgrBI CCGCGG 1 cut(s) 189
SinI GGWCC 4 cut(s) 171, 790, 1349, 2080
SmlI CTYRAG 1 cut(s) 962
SmoI CTYRAG 1 cut(s) 962
Sse8387I CCTGCAGG 1 cut(s) 1222
Sse9I AATT 7 cut(s) 259, 614, 829, 1069, 1151, 1618, 1788
SspMI CTAG 9 cut(s) 425, 794, 888, 1038, 1119, 1176, 1239, 1271, 1278
StyD4I CCNGG 7 cut(s) 126, 1341, 1468, 1710, 1880, 1908, 2101
StyI CCWWGG 3 cut(s) 80, 471, 1047
TaaI ACNGT 7 cut(s) 104, 1109, 1806, 1924, 2115, 2209, 2227
TaiI ACGT 1 cut(s) 1572
TaqII GACCGA 1 cut(s) 795
TasI AATT 7 cut(s) 259, 614, 829, 1069, 1151, 1618, 1788
TatI WGTACW 3 cut(s) 21, 70, 1326
TauI GCSGC 3 cut(s) 148, 191, 194
Tru1I TTAA 9 cut(s) 113, 221, 737, 777, 927, 1244, 1665, 1958, 2233
Tru9I TTAA 9 cut(s) 113, 221, 737, 777, 927, 1244, 1665, 1958, 2233
TscAI CASTG 7 cut(s) 109, 732, 1150, 1255, 1704, 1822, 1929
TseFI GTSAC 2 cut(s) 98, 1336
TseI GCWGC 4 cut(s) 87, 1460, 1753, 1875
Tsp45I GTSAC 2 cut(s) 98, 1336
TspDTI ATGAA 9 cut(s) 339, 507, 530, 771, 887, 1118, 1854, 1932, 1982
TspGWI ACGGA 1 cut(s) 585
TspRI CASTG 7 cut(s) 109, 732, 1150, 1255, 1704, 1822, 1929
VpaK11BI GGWCC 4 cut(s) 171, 790, 1349, 2080
VspI ATTAAT 1 cut(s) 737
XapI RAATTY 3 cut(s) 259, 829, 1069
XceI RCATGY 1 cut(s) 1447
XmiI GTMKAC 1 cut(s) 1180
XspI CTAG 9 cut(s) 425, 794, 888, 1038, 1119, 1176, 1239, 1271, 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.