pycom11g23850

NADH kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0007259
Physical Location & Seq
Reverse (-)
26850544 .. 26855178
4635 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g23850.2

Sequence Viewer

Length: 312 bp
ATGGGGAGGAAGCGATTGTTGGTGGTGCTAAAGCCGATCGAAGCTGACCCAGTTTCCCAATCAGAAGGTCCATCTCGCATCACCAATCCTCAGTCTAAGATGCTACATCACTTAGACAGCAGAAGAAAGGTGCACAATGATGCAATAAGTTGTTGTCAGAATGTTTTGCGCCGCAAGCCCATTGAGTGGAATTCTGTAGTGCTTACCGATCTATCACAGCCCGTCCATGATGTGGACCTTGTTGTCACAGTTGGCGGCGATGGTACTCTATTACAAGCTAGCCATTTCATTGATGACTCAGTTCCATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00760 ko01100 map00760 map01100
Pfam Domains
Protein Families
NAD_kinase

Protein Analysis

104

Amino Acids

11.46

Weight (kDa)

6.96

Isoelectric Point (pI)

70.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 242
AccB7I CCANNNNNTGG 2 cut(s) 186, 232
AciI CCGC 2 cut(s) 172, 255
AcsI RAATTY 1 cut(s) 190
AfaI GTAC 1 cut(s) 265
AfiI CCNNNNNNNGG 2 cut(s) 186, 232
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 2 cut(s) 44, 278
AluI AGCT 2 cut(s) 44, 278
Alw21I GWGCWC 1 cut(s) 135
Alw44I GTGCAC 1 cut(s) 131
ApaLI GTGCAC 1 cut(s) 131
ApoI RAATTY 1 cut(s) 190
AspLEI GCGC 1 cut(s) 171
AspS9I GGNCC 2 cut(s) 68, 235
AsuHPI GGTGA 1 cut(s) 73
AsuNHI GCTAGC 1 cut(s) 278
AvaII GGWCC 2 cut(s) 68, 235
BaeGI GKGCMC 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 135
BccI CCATC 2 cut(s) 79, 254
BfaI CTAG 2 cut(s) 279, 310
BfmI CTRYAG 1 cut(s) 195
BisI GCNGC 2 cut(s) 172, 256
BlsI GCNGC 2 cut(s) 173, 257
Bme18I GGWCC 2 cut(s) 68, 235
BmgT120I GGNCC 2 cut(s) 68, 235
BmrI ACTGGG 1 cut(s) 44
BmsI GCATC 3 cut(s) 87, 90, 130
BmtI GCTAGC 1 cut(s) 282
BmuI ACTGGG 1 cut(s) 44
Bsc4I CCNNNNNNNGG 2 cut(s) 186, 232
Bse1I ACTGG 1 cut(s) 50
BseLI CCNNNNNNNGG 2 cut(s) 186, 232
BseMII CTCAG 2 cut(s) 104, 312
BseNI ACTGG 1 cut(s) 50
BseSI GKGCMC 1 cut(s) 135
Bsh1285I CGRYCG 1 cut(s) 39
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 135
BslI CCNNNNNNNGG 2 cut(s) 186, 232
Bsp1286I GDGCHC 1 cut(s) 135
Bsp143I GATC 2 cut(s) 36, 208
BspACI CCGC 2 cut(s) 172, 255
BspCNI CTCAG 2 cut(s) 103, 311
BspOI GCTAGC 1 cut(s) 282
BsrI ACTGG 1 cut(s) 50
BssMI GATC 2 cut(s) 36, 208
Bst4CI ACNGT 1 cut(s) 250
BstC8I GCNNGC 2 cut(s) 176, 280
BstDEI CTNAG 4 cut(s) 90, 96, 112, 298
BstHHI GCGC 1 cut(s) 171
BstKTI GATC 2 cut(s) 39, 211
BstMBI GATC 2 cut(s) 36, 208
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 1 cut(s) 175
BstSFI CTRYAG 1 cut(s) 195
BstSLI GKGCMC 1 cut(s) 135
BtgZI GCGATG 1 cut(s) 273
Cac8I GCNNGC 2 cut(s) 176, 280
CfoI GCGC 1 cut(s) 171
Cfr13I GGNCC 2 cut(s) 68, 235
Csp6I GTAC 1 cut(s) 264
CviAII CATG 1 cut(s) 227
CviJI RGCY 6 cut(s) 34, 44, 178, 220, 278, 282
CviKI_1 RGCY 6 cut(s) 34, 44, 178, 220, 278, 282
CviQI GTAC 1 cut(s) 264
DdeI CTNAG 4 cut(s) 90, 96, 112, 298
DpnI GATC 2 cut(s) 38, 210
DpnII GATC 2 cut(s) 36, 208
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
Eco47I GGWCC 2 cut(s) 68, 235
EcoRI GAATTC 1 cut(s) 190
FaeI CATG 1 cut(s) 230
FaiI YATR 1 cut(s) 228
FatI CATG 1 cut(s) 226
Fnu4HI GCNGC 2 cut(s) 172, 256
Fsp4HI GCNGC 2 cut(s) 172, 256
FspBI CTAG 2 cut(s) 279, 310
GlaI GCGC 1 cut(s) 170
GluI GCNGC 2 cut(s) 172, 256
HhaI GCGC 1 cut(s) 171
Hin1II CATG 1 cut(s) 230
Hin6I GCGC 1 cut(s) 169
HinP1I GCGC 1 cut(s) 169
HinfI GANTC 1 cut(s) 296
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 2 cut(s) 133, 235
Hpy188I TCNGA 2 cut(s) 64, 159
Hpy8I GTNNAC 2 cut(s) 133, 235
HpyAV CCTTC 1 cut(s) 59
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4V TGCA 2 cut(s) 133, 143
HpyF10VI GCNNNNNNNGC 1 cut(s) 175
HpyF3I CTNAG 4 cut(s) 90, 96, 112, 298
Hsp92II CATG 1 cut(s) 230
HspAI GCGC 1 cut(s) 169
Kzo9I GATC 2 cut(s) 36, 208
LpnPI CCDG 1 cut(s) 63
LweI GCATC 3 cut(s) 87, 90, 130
MaeI CTAG 2 cut(s) 279, 310
MaeIII GTNAC 1 cut(s) 244
MalI GATC 2 cut(s) 38, 210
MboI GATC 2 cut(s) 36, 208
MboII GAAGA 1 cut(s) 135
MhlI GDGCHC 1 cut(s) 135
MluCI AATT 1 cut(s) 190
MlyI GAGTC 1 cut(s) 290
MnlI CCTC 1 cut(s) 99
MslI CAYNNNNRTG 1 cut(s) 138
MwoI GCNNNNNNNGC 1 cut(s) 175
NdeII GATC 2 cut(s) 36, 208
NheI GCTAGC 1 cut(s) 278
NlaIII CATG 1 cut(s) 230
NmuCI GTSAC 1 cut(s) 244
PflMI CCANNNNNTGG 2 cut(s) 186, 232
PkrI GCNGC 2 cut(s) 173, 257
Ple19I CGATCG 1 cut(s) 39
PleI GAGTC 1 cut(s) 290
PpsI GAGTC 1 cut(s) 290
PspPI GGNCC 2 cut(s) 68, 235
PvuI CGATCG 1 cut(s) 39
RsaI GTAC 1 cut(s) 265
RsaNI GTAC 1 cut(s) 264
RseI CAYNNNNRTG 1 cut(s) 138
SatI GCNGC 2 cut(s) 172, 256
Sau3AI GATC 2 cut(s) 36, 208
Sau96I GGNCC 2 cut(s) 68, 235
SchI GAGTC 1 cut(s) 290
SduI GDGCHC 1 cut(s) 135
SetI ASST 5 cut(s) 46, 70, 132, 240, 280
SfaNI GCATC 3 cut(s) 87, 90, 130
SfcI CTRYAG 1 cut(s) 195
SgeI CNNG 8 cut(s) 62, 87, 187, 233, 239, 251, 287, 291
SinI GGWCC 2 cut(s) 68, 235
SmiMI CAYNNNNRTG 1 cut(s) 138
Sse9I AATT 1 cut(s) 190
SsiI CCGC 2 cut(s) 172, 255
SspMI CTAG 2 cut(s) 279, 310
TaaI ACNGT 1 cut(s) 250
TaqI TCGA 1 cut(s) 39
TasI AATT 1 cut(s) 190
TauI GCSGC 2 cut(s) 174, 258
TseFI GTSAC 1 cut(s) 244
Tsp45I GTSAC 1 cut(s) 244
TspDTI ATGAA 1 cut(s) 277
Van91I CCANNNNNTGG 2 cut(s) 186, 232
VneI GTGCAC 1 cut(s) 131
VpaK11BI GGWCC 2 cut(s) 68, 235
XapI RAATTY 1 cut(s) 190
XspI CTAG 2 cut(s) 279, 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.