pycom12561g00240

Lysine methyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012561
Physical Location & Seq
Forward (+)
331754 .. 332638
885 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12561g00240.2

Sequence Viewer

Length: 315 bp
ATGATCGATCTGAAGAAAAATATAGATCTGCATGCATCTTCCGAGATGTCTAACTGTTGTTCTGAATTAGTCGCTGAGAAACTCGAATGGGGAAATTCGGAGCAGATCTGCCACATTTTACAGACGTATACAAATGGATTTGATTTGATTCTTGGACCTATGTATCCCGAACGAAGACGTAAGCAGCAACTTGTTATTAGTTTGCTTTTTGCTTCACATTTTCGGAAAAGGTCTTTATTGAATGTAATACCAGAGAGTTATATAAGTGCTGTTGTAGTTGGTATTATCATTCATATTCAAAGTCTACTCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.9

Weight (kDa)

6.89

Isoelectric Point (pI)

71.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 128, 304
AcsI RAATTY 1 cut(s) 94
AcuI CTGAAG 1 cut(s) 32
AgsI TTSAA 2 cut(s) 241, 299
ApeKI GCWGC 1 cut(s) 184
ApoI RAATTY 1 cut(s) 94
AspS9I GGNCC 1 cut(s) 155
AvaII GGWCC 1 cut(s) 155
BaeI ACNNNNGTAYC 2 cut(s) 146, 179
BbsI GAAGAC 1 cut(s) 181
BbvI GCAGC 1 cut(s) 196
BciVI GTATCC 1 cut(s) 174
BfuI GTATCC 1 cut(s) 174
BglII AGATCT 2 cut(s) 25, 105
BisI GCNGC 1 cut(s) 185
BlsI GCNGC 1 cut(s) 186
Bme18I GGWCC 1 cut(s) 155
BmgT120I GGNCC 1 cut(s) 155
BmsI GCATC 1 cut(s) 44
BpiI GAAGAC 1 cut(s) 181
Bsa29I ATCGAT 1 cut(s) 6
BseCI ATCGAT 1 cut(s) 6
BseMII CTCAG 1 cut(s) 66
BseXI GCAGC 1 cut(s) 196
BshVI ATCGAT 1 cut(s) 6
Bsp143I GATC 4 cut(s) 3, 7, 25, 105
BspCNI CTCAG 1 cut(s) 67
BspDI ATCGAT 1 cut(s) 6
BssMI GATC 4 cut(s) 3, 7, 25, 105
BssNAI GTATAC 1 cut(s) 129
Bst1107I GTATAC 1 cut(s) 129
Bst4CI ACNGT 1 cut(s) 56
BstC8I GCNNGC 1 cut(s) 33
BstDEI CTNAG 1 cut(s) 75
BstKTI GATC 4 cut(s) 6, 10, 28, 108
BstMBI GATC 4 cut(s) 3, 7, 25, 105
BstNSI RCATGY 1 cut(s) 35
BstV1I GCAGC 1 cut(s) 196
BstV2I GAAGAC 1 cut(s) 181
BstX2I RGATCY 2 cut(s) 25, 105
BstYI RGATCY 2 cut(s) 25, 105
BstZ17I GTATAC 1 cut(s) 129
Bsu15I ATCGAT 1 cut(s) 6
BsuI GTATCC 1 cut(s) 174
BsuTUI ATCGAT 1 cut(s) 6
Cac8I GCNNGC 1 cut(s) 33
Cfr13I GGNCC 1 cut(s) 155
ClaI ATCGAT 1 cut(s) 6
CviAII CATG 2 cut(s) 32, 310
DdeI CTNAG 1 cut(s) 75
DpnI GATC 4 cut(s) 5, 9, 27, 107
DpnII GATC 4 cut(s) 3, 7, 25, 105
Eco47I GGWCC 1 cut(s) 155
Eco57I CTGAAG 1 cut(s) 32
EcoT22I ATGCAT 1 cut(s) 37
FaeI CATG 2 cut(s) 35, 313
FaiI YATR 8 cut(s) 23, 33, 129, 161, 261, 263, 294, 311
FatI CATG 2 cut(s) 31, 309
FblI GTMKAC 2 cut(s) 128, 304
Fnu4HI GCNGC 1 cut(s) 185
Fsp4HI GCNGC 1 cut(s) 185
GluI GCNGC 1 cut(s) 185
Hin1II CATG 2 cut(s) 35, 313
HinfI GANTC 1 cut(s) 148
Hpy166II GTNNAC 2 cut(s) 129, 305
Hpy188I TCNGA 5 cut(s) 12, 43, 64, 100, 225
Hpy188III TCNNGA 1 cut(s) 167
Hpy8I GTNNAC 2 cut(s) 129, 305
HpyCH4III ACNGT 1 cut(s) 56
HpyCH4IV ACGT 2 cut(s) 125, 178
HpyCH4V TGCA 2 cut(s) 31, 35
HpyF3I CTNAG 1 cut(s) 75
HpySE526I ACGT 2 cut(s) 125, 178
Hsp92II CATG 2 cut(s) 35, 313
Kzo9I GATC 4 cut(s) 3, 7, 25, 105
LmnI GCTCC 1 cut(s) 100
LpnPI CCDG 1 cut(s) 264
Lsp1109I GCAGC 1 cut(s) 196
LweI GCATC 1 cut(s) 44
MaeII ACGT 2 cut(s) 125, 178
MalI GATC 4 cut(s) 5, 9, 27, 107
MboI GATC 4 cut(s) 3, 7, 25, 105
MboII GAAGA 3 cut(s) 25, 30, 186
MflI RGATCY 2 cut(s) 25, 105
MluCI AATT 2 cut(s) 65, 94
Mph1103I ATGCAT 1 cut(s) 37
NdeII GATC 4 cut(s) 3, 7, 25, 105
NlaIII CATG 2 cut(s) 35, 313
NsiI ATGCAT 1 cut(s) 37
NspI RCATGY 1 cut(s) 35
PaeI GCATGC 1 cut(s) 35
PfeI GAWTC 1 cut(s) 148
PkrI GCNGC 1 cut(s) 186
PspPI GGNCC 1 cut(s) 155
PsuI RGATCY 2 cut(s) 25, 105
SatI GCNGC 1 cut(s) 185
Sau3AI GATC 4 cut(s) 3, 7, 25, 105
Sau96I GGNCC 1 cut(s) 155
SetI ASST 4 cut(s) 128, 160, 181, 233
SfaNI GCATC 1 cut(s) 44
SgeI CNNG 7 cut(s) 44, 55, 95, 164, 179, 203, 263
SinI GGWCC 1 cut(s) 155
SphI GCATGC 1 cut(s) 35
Sse9I AATT 2 cut(s) 65, 94
TaaI ACNGT 1 cut(s) 56
TaiI ACGT 2 cut(s) 128, 181
TaqI TCGA 2 cut(s) 6, 84
TasI AATT 2 cut(s) 65, 94
TfiI GAWTC 1 cut(s) 148
TseI GCWGC 1 cut(s) 184
TspDTI ATGAA 1 cut(s) 281
VpaK11BI GGWCC 1 cut(s) 155
XapI RAATTY 1 cut(s) 94
XceI RCATGY 1 cut(s) 35
XmiI GTMKAC 2 cut(s) 128, 304
Zsp2I ATGCAT 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.