RchiOBHm_Chr5g0050231

Lysine methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
50226189 .. 50228087
1899 bp
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UTR
Exon/CDS
Intron
PRQ32783

Sequence Viewer

Length: 141 bp
ATGTGTCCCGTGCTAAGACGGGTCATGGATTCATTGGTCATTAGTGAAGCGGCCCGACATAAGATGCAGATAAATGAATTAGTTGGGACTCGATCCTTCGTTGGCAATCTCGAAGGACTTATCTATGAGGTGAACCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

46

Amino Acids

5.2

Weight (kDa)

6.53

Isoelectric Point (pI)

58.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 50
AclWI GGATC 1 cut(s) 87
AlwI GGATC 1 cut(s) 87
AoxI GGCC 1 cut(s) 51
AspS9I GGNCC 1 cut(s) 52
BfmI CTRYAG 1 cut(s) 137
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
BmgT120I GGNCC 1 cut(s) 52
BmsI GCATC 1 cut(s) 54
BshFI GGCC 1 cut(s) 53
BslFI GGGAC 1 cut(s) 100
BsmFI GGGAC 1 cut(s) 100
BsnI GGCC 1 cut(s) 53
Bsp143I GATC 1 cut(s) 92
BspACI CCGC 1 cut(s) 50
BspANI GGCC 1 cut(s) 53
BspPI GGATC 1 cut(s) 87
BssMI GATC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 14
BstKTI GATC 1 cut(s) 95
BstMBI GATC 1 cut(s) 92
BstSFI CTRYAG 1 cut(s) 137
BsuRI GGCC 1 cut(s) 53
Cfr13I GGNCC 1 cut(s) 52
CviAII CATG 1 cut(s) 25
CviJI RGCY 1 cut(s) 53
CviKI_1 RGCY 1 cut(s) 53
DdeI CTNAG 1 cut(s) 14
DpnI GATC 1 cut(s) 94
DpnII GATC 1 cut(s) 92
FaeI CATG 1 cut(s) 28
FaiI YATR 4 cut(s) 26, 60, 126, 139
FaqI GGGAC 1 cut(s) 100
FatI CATG 1 cut(s) 24
Fnu4HI GCNGC 1 cut(s) 51
Fsp4HI GCNGC 1 cut(s) 51
GluI GCNGC 1 cut(s) 51
HaeIII GGCC 1 cut(s) 53
Hin1II CATG 1 cut(s) 28
HinfI GANTC 2 cut(s) 29, 88
Hpy166II GTNNAC 1 cut(s) 133
Hpy188III TCNNGA 1 cut(s) 110
Hpy8I GTNNAC 1 cut(s) 133
HpyAV CCTTC 2 cut(s) 106, 107
HpyCH4V TGCA 1 cut(s) 67
HpyF3I CTNAG 1 cut(s) 14
Hsp92II CATG 1 cut(s) 28
Kzo9I GATC 1 cut(s) 92
LweI GCATC 1 cut(s) 54
MalI GATC 1 cut(s) 94
MboI GATC 1 cut(s) 92
MluCI AATT 1 cut(s) 77
MlyI GAGTC 1 cut(s) 82
MnlI CCTC 1 cut(s) 121
NdeII GATC 1 cut(s) 92
NlaIII CATG 1 cut(s) 28
PfeI GAWTC 1 cut(s) 29
PkrI GCNGC 1 cut(s) 52
PleI GAGTC 1 cut(s) 82
PpsI GAGTC 1 cut(s) 82
PspPI GGNCC 1 cut(s) 52
SatI GCNGC 1 cut(s) 51
Sau3AI GATC 1 cut(s) 92
Sau96I GGNCC 1 cut(s) 52
SchI GAGTC 1 cut(s) 82
SetI ASST 2 cut(s) 132, 138
SfaNI GCATC 1 cut(s) 54
SfcI CTRYAG 1 cut(s) 137
SgeI CNNG 7 cut(s) 20, 22, 32, 37, 66, 102, 122
Sse9I AATT 1 cut(s) 77
SsiI CCGC 1 cut(s) 50
TaqI TCGA 2 cut(s) 91, 111
TasI AATT 1 cut(s) 77
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 1 cut(s) 29
TspDTI ATGAA 2 cut(s) 21, 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.