RLG00000034691

Lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0004944
Physical Location & Seq
Reverse (-)
51374460 .. 51382665
8206 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034691

Sequence Viewer

Length: 762 bp
ATGGAAAGAGAAGGAGAAGACGACGACATAGTTTGCTTAGACGAATCGTTTTTCATCGATGACAATTACCAGCTGACCACTTTCACATTTGGGTCTCAAGTTCTTCAACTCCTTTGCCTCCAATCTGCTTCCACTGATTTTGATCTTACAGGACAATTGGTGTGGCCAGGGGCAATGCTGTTGAATGATTACCTTTCTAAGAATGCAGAGATCCTGCAAGGATGCACTGTTATTGAGTTAGGGTCTGGGGTTGGTATTACTGGAATACTATGCAGCAGATTTTGCAGTCAAGTTGTTTTAACAGACCACAATGAAGAAGTGCTCAAGATCTTGAATAAAAATATAGAGCTACACGCATCTTCTGATAATCCTGAATACTGTGCTGGTTTAGCAGCAGAGAACCTAGAATGGGGAAATTCTGAGCAGATCTCCCAGATTTTACAAAAGTATTCAAGAGGGTTCGATTTGATTCTTGGAGCTGATATATATATCCTGAATTGTTATTCTTTTGCCTTTATAATAAAGAAATCTATTCAGGGATCCCACAACATTACTTCGCTTTTTGACACGGTGGAAGAACTTCTTCGAGTTAGAAAAGAAGGAAAGTGCAAATTCATGCTAGCCTATGTGTCCCGTGCTAAGACCATGGATTCATTGGTCATTAGTGAAGCGGCCCGACGTAAGATGCAGATAAATGAATTAGTTGGGACTCGATCCTTCGTTGGCAATCTCGAAGGACTTATCTATGAGGTGAACCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

254

Amino Acids

28.28

Weight (kDa)

4.57

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 50 - 163 1.7e-16 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 518
AciI CCGC 1 cut(s) 671
AclWI GGATC 4 cut(s) 205, 534, 547, 708
AcoI YGGCCR 1 cut(s) 164
AcsI RAATTY 2 cut(s) 415, 611
AfiI CCNNNNNNNGG 1 cut(s) 409
AgsI TTSAA 4 cut(s) 107, 184, 334, 453
AjnI CCWGG 1 cut(s) 166
AluBI AGCT 3 cut(s) 73, 349, 479
AluI AGCT 3 cut(s) 73, 349, 479
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 1 cut(s) 99
AlwI GGATC 4 cut(s) 205, 534, 547, 708
AoxI GGCC 2 cut(s) 164, 672
ApeKI GCWGC 2 cut(s) 273, 392
ApoI RAATTY 2 cut(s) 415, 611
Asp700I GAANNNNTTC 2 cut(s) 579, 582
AspS9I GGNCC 1 cut(s) 673
AsuNHI GCTAGC 1 cut(s) 619
BalI TGGCCA 1 cut(s) 166
BamHI GGATCC 1 cut(s) 539
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 324
BbvI GCAGC 2 cut(s) 285, 404
BciT130I CCWGG 1 cut(s) 168
BcoDI GTCTC 1 cut(s) 99
BfaI CTAG 2 cut(s) 404, 620
BfmI CTRYAG 1 cut(s) 758
BglII AGATCT 2 cut(s) 327, 426
BisI GCNGC 3 cut(s) 274, 393, 672
BlsI GCNGC 3 cut(s) 275, 394, 673
Bme1390I CCNGG 1 cut(s) 168
BmgT120I GGNCC 1 cut(s) 673
BmiI GGNNCC 1 cut(s) 541
BmrFI CCNGG 1 cut(s) 168
BmsI GCATC 3 cut(s) 212, 365, 675
BmtI GCTAGC 1 cut(s) 623
BpiI GAAGAC 1 cut(s) 24
BplI GAGNNNNNCTC 2 cut(s) 413, 445
BpuEI CTTGAG 2 cut(s) 81, 308
Bsa29I ATCGAT 1 cut(s) 57
BsaBI GATNNNNATC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 99
BsaJI CCNNGG 2 cut(s) 167, 645
Bsc4I CCNNNNNNNGG 1 cut(s) 409
Bse1I ACTGG 1 cut(s) 265
Bse3DI GCAATG 1 cut(s) 180
Bse8I GATNNNNATC 1 cut(s) 141
BseBI CCWGG 1 cut(s) 168
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 2 cut(s) 167, 645
BseGI GGATG 1 cut(s) 227
BseJI GATNNNNATC 1 cut(s) 141
BseLI CCNNNNNNNGG 1 cut(s) 409
BseMI GCAATG 1 cut(s) 180
BseMII CTCAG 1 cut(s) 411
BseNI ACTGG 1 cut(s) 265
BseXI GCAGC 2 cut(s) 285, 404
BshFI GGCC 2 cut(s) 166, 674
BshVI ATCGAT 1 cut(s) 57
BsiHKAI GWGCWC 1 cut(s) 324
BslFI GGGAC 2 cut(s) 616, 721
BslI CCNNNNNNNGG 1 cut(s) 409
BsmAI GTCTC 1 cut(s) 99
BsmFI GGGAC 2 cut(s) 616, 721
BsmI GAATGC 1 cut(s) 208
BsnI GGCC 2 cut(s) 166, 674
Bso31I GGTCTC 1 cut(s) 99
Bsp1286I GDGCHC 1 cut(s) 324
Bsp143I GATC 6 cut(s) 142, 210, 327, 426, 539, 713
Bsp19I CCATGG 1 cut(s) 645
BspACI CCGC 1 cut(s) 671
BspANI GGCC 2 cut(s) 166, 674
BspCNI CTCAG 1 cut(s) 412
BspDI ATCGAT 1 cut(s) 57
BspLI GGNNCC 1 cut(s) 541
BspOI GCTAGC 1 cut(s) 623
BspPI GGATC 4 cut(s) 205, 534, 547, 708
BspTNI GGTCTC 1 cut(s) 99
BsrDI GCAATG 1 cut(s) 180
BsrI ACTGG 1 cut(s) 265
BssECI CCNNGG 2 cut(s) 167, 645
BssMI GATC 6 cut(s) 142, 210, 327, 426, 539, 713
BssT1I CCWWGG 1 cut(s) 645
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 3 cut(s) 229, 380, 571
BstAPI GCANNNNNTGC 1 cut(s) 282
BstC8I GCNNGC 1 cut(s) 621
BstDEI CTNAG 4 cut(s) 37, 198, 420, 639
BstDSI CCRYGG 1 cut(s) 645
BstF5I GGATG 1 cut(s) 227
BstKTI GATC 6 cut(s) 145, 213, 330, 429, 542, 716
BstMAI GTCTC 1 cut(s) 99
BstMBI GATC 6 cut(s) 142, 210, 327, 426, 539, 713
BstMWI GCNNNNNNNGC 2 cut(s) 282, 389
BstNI CCWGG 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 166
BstSFI CTRYAG 1 cut(s) 758
BstV1I GCAGC 2 cut(s) 285, 404
BstV2I GAAGAC 1 cut(s) 24
BstX2I RGATCY 4 cut(s) 210, 327, 426, 539
BstYI RGATCY 4 cut(s) 210, 327, 426, 539
Bsu15I ATCGAT 1 cut(s) 57
BsuRI GGCC 2 cut(s) 166, 674
BsuTUI ATCGAT 1 cut(s) 57
BtgI CCRYGG 1 cut(s) 645
BtsCI GGATG 1 cut(s) 227
BtsIMutI CAGTG 2 cut(s) 132, 225
Cac8I GCNNGC 1 cut(s) 621
Cfr13I GGNCC 1 cut(s) 673
ClaI ATCGAT 1 cut(s) 57
CspCI CAANNNNNGTGG 4 cut(s) 121, 143, 156, 178
CviAII CATG 2 cut(s) 616, 646
CviJI RGCY 6 cut(s) 73, 166, 349, 479, 623, 674
CviKI_1 RGCY 6 cut(s) 73, 166, 349, 479, 623, 674
DdeI CTNAG 4 cut(s) 37, 198, 420, 639
DpnI GATC 6 cut(s) 144, 212, 329, 428, 541, 715
DpnII GATC 6 cut(s) 142, 210, 327, 426, 539, 713
EaeI YGGCCR 1 cut(s) 164
Eco130I CCWWGG 1 cut(s) 645
Eco31I GGTCTC 1 cut(s) 99
EcoRII CCWGG 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 645
ErhI CCWWGG 1 cut(s) 645
FaeI CATG 2 cut(s) 619, 649
FalI AAGNNNNNCTT 2 cut(s) 567, 599
FaqI GGGAC 2 cut(s) 616, 721
FatI CATG 2 cut(s) 615, 645
Fnu4HI GCNGC 3 cut(s) 274, 393, 672
FokI GGATG 1 cut(s) 234
Fsp4HI GCNGC 3 cut(s) 274, 393, 672
FspBI CTAG 2 cut(s) 404, 620
GluI GCNGC 3 cut(s) 274, 393, 672
HaeIII GGCC 2 cut(s) 166, 674
Hin1II CATG 2 cut(s) 619, 649
HinfI GANTC 4 cut(s) 44, 469, 650, 709
Hpy166II GTNNAC 1 cut(s) 754
Hpy188I TCNGA 2 cut(s) 364, 421
Hpy188III TCNNGA 6 cut(s) 325, 331, 371, 453, 493, 731
Hpy8I GTNNAC 1 cut(s) 754
Hpy99I CGWCG 2 cut(s) 26, 681
HpyAV CCTTC 4 cut(s) 5, 593, 727, 728
HpyCH4III ACNGT 3 cut(s) 229, 380, 571
HpyCH4IV ACGT 1 cut(s) 679
HpyCH4V TGCA 7 cut(s) 206, 217, 225, 273, 285, 609, 688
HpyF10VI GCNNNNNNNGC 2 cut(s) 282, 389
HpyF3I CTNAG 4 cut(s) 37, 198, 420, 639
HpySE526I ACGT 1 cut(s) 679
Hsp92II CATG 2 cut(s) 619, 649
Kzo9I GATC 6 cut(s) 142, 210, 327, 426, 539, 713
LmnI GCTCC 1 cut(s) 476
Lsp1109I GCAGC 2 cut(s) 285, 404
LweI GCATC 3 cut(s) 212, 365, 675
MaeI CTAG 2 cut(s) 404, 620
MaeII ACGT 1 cut(s) 679
MalI GATC 6 cut(s) 144, 212, 329, 428, 541, 715
MboI GATC 6 cut(s) 142, 210, 327, 426, 539, 713
MboII GAAGA 6 cut(s) 29, 95, 326, 351, 575, 587
MfeI CAATTG 1 cut(s) 155
MflI RGATCY 4 cut(s) 210, 327, 426, 539
MhlI GDGCHC 1 cut(s) 324
MlsI TGGCCA 1 cut(s) 166
MluCI AATT 6 cut(s) 64, 155, 415, 496, 611, 698
MluNI TGGCCA 1 cut(s) 166
MlyI GAGTC 1 cut(s) 703
MnlI CCTC 3 cut(s) 128, 449, 742
Mox20I TGGCCA 1 cut(s) 166
MroXI GAANNNNTTC 2 cut(s) 579, 582
MscI TGGCCA 1 cut(s) 166
MseI TTAA 1 cut(s) 299
Msp20I TGGCCA 1 cut(s) 166
MspA1I CMGCKG 1 cut(s) 73
MspR9I CCNGG 1 cut(s) 168
MunI CAATTG 1 cut(s) 155
Mva1269I GAATGC 1 cut(s) 208
MvaI CCWGG 1 cut(s) 168
MwoI GCNNNNNNNGC 2 cut(s) 282, 389
NcoI CCATGG 1 cut(s) 645
NdeII GATC 6 cut(s) 142, 210, 327, 426, 539, 713
NheI GCTAGC 1 cut(s) 619
NlaIII CATG 2 cut(s) 619, 649
NlaIV GGNNCC 1 cut(s) 541
PctI GAATGC 1 cut(s) 208
PdmI GAANNNNTTC 2 cut(s) 579, 582
PfeI GAWTC 3 cut(s) 44, 469, 650
PkrI GCNGC 3 cut(s) 275, 394, 673
PleI GAGTC 1 cut(s) 703
PpsI GAGTC 1 cut(s) 703
PsiI TTATAA 1 cut(s) 518
Psp6I CCWGG 1 cut(s) 166
PspGI CCWGG 1 cut(s) 166
PspN4I GGNNCC 1 cut(s) 541
PspPI GGNCC 1 cut(s) 673
PsuI RGATCY 4 cut(s) 210, 327, 426, 539
PvuII CAGCTG 1 cut(s) 73
SaqAI TTAA 1 cut(s) 299
SatI GCNGC 3 cut(s) 274, 393, 672
Sau3AI GATC 6 cut(s) 142, 210, 327, 426, 539, 713
Sau96I GGNCC 1 cut(s) 673
SchI GAGTC 1 cut(s) 703
ScrFI CCNGG 1 cut(s) 168
SduI GDGCHC 1 cut(s) 324
SetI ASST 8 cut(s) 75, 195, 351, 405, 481, 682, 753, 759
SfaNI GCATC 3 cut(s) 212, 365, 675
SfcI CTRYAG 1 cut(s) 758
SmlI CTYRAG 2 cut(s) 96, 323
SmoI CTYRAG 2 cut(s) 96, 323
Sse9I AATT 6 cut(s) 64, 155, 415, 496, 611, 698
SsiI CCGC 1 cut(s) 671
SspMI CTAG 2 cut(s) 404, 620
StyD4I CCNGG 1 cut(s) 166
StyI CCWWGG 1 cut(s) 645
TaaI ACNGT 3 cut(s) 229, 380, 571
TaiI ACGT 1 cut(s) 682
TaqI TCGA 5 cut(s) 57, 462, 586, 712, 732
TasI AATT 6 cut(s) 64, 155, 415, 496, 611, 698
TauI GCSGC 1 cut(s) 674
TfiI GAWTC 3 cut(s) 44, 469, 650
Tru1I TTAA 1 cut(s) 299
Tru9I TTAA 1 cut(s) 299
TscAI CASTG 2 cut(s) 139, 232
TseI GCWGC 2 cut(s) 273, 392
TspDTI ATGAA 5 cut(s) 43, 327, 604, 642, 711
TspRI CASTG 2 cut(s) 139, 232
XapI RAATTY 2 cut(s) 415, 611
XcmI CCANNNNNNNNNTGG 1 cut(s) 652
XmnI GAANNNNTTC 2 cut(s) 579, 582
XspI CTAG 2 cut(s) 404, 620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.