Rh5DG354600

Lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0004944
Physical Location & Seq
Reverse (-)
52180144 .. 52188366
8223 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG354600.1

Sequence Viewer

Length: 750 bp
ATGGAAAGAGAAGGAGAAGACGACGACATAGTTTGCCTAGACGAATCGTTTTTCATCGATGACAATTACCAGCTGACGACTTTCACTTTTGGGTCTCAAGTTCTTCAACTCCTTTGCCTCCAATCTGCTTCCACTGATTTTGATCTTACAGGACAATTGGTGTGGCCAGGGGCAATGCTGTTGAATGATTACCTTTCTAAGAATGCAGAGATCCTGCAAGGATGCACTGTTATTGAGTTAGGGTCTGGGGTTGGTATTACTGGAATACTATGCAGCAGATTTTGCAGTCAAGTTGTTTTAACAGACCACAATGAAGAAGTGCTCAAGATCTTGAATAAAAATATAGAGCTACACGCATCTTCTGATAATCCTGAATACTGTGCTGGATTAGCAGCGGAGAAACTAGAATGGGGAAATTCTGAGCAGATATCCCAGATTTTACAAAAGTATTCAAGAGGGTTCGATTTGATTCTTGGAGCTGATATATATATCCTGAATTGTTATTCTTTTGCCTTTATAATAAAGAAACAGTCAAGCATTACTTCACTTTTTGACACTGTGGAAGAACTTCTTCGAGTTAGAAAAGAAGGAAAGTGCAAATTCATACTGGCCTATGTGTCCCGTGCTAAGACCATGGATTCATTGGTCATTAGTGAAGCGGCCCGACATAAGATGCAGATAAATGAATTAGTTGGGACTCGATCCTTCGTTGGCAATCTCGAAGGACTTATCTATGAGGTGAACCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

249

Amino Acids

27.84

Weight (kDa)

4.57

Isoelectric Point (pI)

47.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 50 - 191 5.5e-17 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 518
AciI CCGC 2 cut(s) 395, 659
AclWI GGATC 2 cut(s) 205, 696
AcoI YGGCCR 1 cut(s) 164
AcsI RAATTY 2 cut(s) 415, 599
AgsI TTSAA 4 cut(s) 107, 184, 334, 453
AjnI CCWGG 1 cut(s) 166
AluBI AGCT 3 cut(s) 73, 349, 479
AluI AGCT 3 cut(s) 73, 349, 479
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 1 cut(s) 99
AlwI GGATC 2 cut(s) 205, 696
AoxI GGCC 3 cut(s) 164, 609, 660
ApeKI GCWGC 2 cut(s) 273, 392
ApoI RAATTY 2 cut(s) 415, 599
Asp700I GAANNNNTTC 2 cut(s) 567, 570
AspS9I GGNCC 1 cut(s) 661
BalI TGGCCA 1 cut(s) 166
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 324
BbvI GCAGC 2 cut(s) 285, 404
BciT130I CCWGG 1 cut(s) 168
BcoDI GTCTC 1 cut(s) 99
BfaI CTAG 2 cut(s) 38, 404
BfmI CTRYAG 1 cut(s) 746
BglII AGATCT 1 cut(s) 327
BisI GCNGC 3 cut(s) 274, 393, 660
BlsI GCNGC 3 cut(s) 275, 394, 661
Bme1390I CCNGG 1 cut(s) 168
BmgT120I GGNCC 1 cut(s) 661
BmrFI CCNGG 1 cut(s) 168
BmsI GCATC 3 cut(s) 212, 365, 663
BpiI GAAGAC 1 cut(s) 24
BpuEI CTTGAG 2 cut(s) 81, 308
Bsa29I ATCGAT 1 cut(s) 57
BsaBI GATNNNNATC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 99
BsaJI CCNNGG 2 cut(s) 167, 633
Bse1I ACTGG 2 cut(s) 265, 612
Bse3DI GCAATG 1 cut(s) 180
Bse8I GATNNNNATC 1 cut(s) 141
BseBI CCWGG 1 cut(s) 168
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 2 cut(s) 167, 633
BseGI GGATG 1 cut(s) 227
BseJI GATNNNNATC 1 cut(s) 141
BseMI GCAATG 1 cut(s) 180
BseMII CTCAG 1 cut(s) 411
BseNI ACTGG 2 cut(s) 265, 612
BseXI GCAGC 2 cut(s) 285, 404
BshFI GGCC 3 cut(s) 166, 611, 662
BshVI ATCGAT 1 cut(s) 57
BsiHKAI GWGCWC 1 cut(s) 324
BslFI GGGAC 2 cut(s) 604, 709
BsmAI GTCTC 1 cut(s) 99
BsmFI GGGAC 2 cut(s) 604, 709
BsmI GAATGC 1 cut(s) 208
BsnI GGCC 3 cut(s) 166, 611, 662
Bso31I GGTCTC 1 cut(s) 99
Bsp1286I GDGCHC 1 cut(s) 324
Bsp143I GATC 4 cut(s) 142, 210, 327, 701
Bsp19I CCATGG 1 cut(s) 633
BspACI CCGC 2 cut(s) 395, 659
BspANI GGCC 3 cut(s) 166, 611, 662
BspCNI CTCAG 1 cut(s) 412
BspDI ATCGAT 1 cut(s) 57
BspPI GGATC 2 cut(s) 205, 696
BspTNI GGTCTC 1 cut(s) 99
BsrDI GCAATG 1 cut(s) 180
BsrI ACTGG 2 cut(s) 265, 612
BssECI CCNNGG 2 cut(s) 167, 633
BssMI GATC 4 cut(s) 142, 210, 327, 701
BssT1I CCWWGG 1 cut(s) 633
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 4 cut(s) 229, 380, 531, 559
BstAPI GCANNNNNTGC 1 cut(s) 282
BstDEI CTNAG 3 cut(s) 198, 420, 627
BstDSI CCRYGG 1 cut(s) 633
BstF5I GGATG 1 cut(s) 227
BstKTI GATC 4 cut(s) 145, 213, 330, 704
BstMAI GTCTC 1 cut(s) 99
BstMBI GATC 4 cut(s) 142, 210, 327, 701
BstMWI GCNNNNNNNGC 2 cut(s) 282, 389
BstNI CCWGG 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 166
BstSFI CTRYAG 1 cut(s) 746
BstV1I GCAGC 2 cut(s) 285, 404
BstV2I GAAGAC 1 cut(s) 24
BstX2I RGATCY 2 cut(s) 210, 327
BstYI RGATCY 2 cut(s) 210, 327
Bsu15I ATCGAT 1 cut(s) 57
BsuRI GGCC 3 cut(s) 166, 611, 662
BsuTUI ATCGAT 1 cut(s) 57
BtgI CCRYGG 1 cut(s) 633
BtsCI GGATG 1 cut(s) 227
BtsIMutI CAGTG 3 cut(s) 132, 225, 555
Cfr13I GGNCC 1 cut(s) 661
ClaI ATCGAT 1 cut(s) 57
CspCI CAANNNNNGTGG 4 cut(s) 121, 143, 156, 178
CviAII CATG 1 cut(s) 634
CviJI RGCY 6 cut(s) 73, 166, 349, 479, 611, 662
CviKI_1 RGCY 6 cut(s) 73, 166, 349, 479, 611, 662
DdeI CTNAG 3 cut(s) 198, 420, 627
DpnI GATC 4 cut(s) 144, 212, 329, 703
DpnII GATC 4 cut(s) 142, 210, 327, 701
EaeI YGGCCR 1 cut(s) 164
Eco130I CCWWGG 1 cut(s) 633
Eco31I GGTCTC 1 cut(s) 99
Eco32I GATATC 1 cut(s) 429
EcoRII CCWGG 1 cut(s) 166
EcoRV GATATC 1 cut(s) 429
EcoT14I CCWWGG 1 cut(s) 633
ErhI CCWWGG 1 cut(s) 633
FaeI CATG 1 cut(s) 637
FalI AAGNNNNNCTT 4 cut(s) 526, 558, 555, 587
FaqI GGGAC 2 cut(s) 604, 709
FatI CATG 1 cut(s) 633
Fnu4HI GCNGC 3 cut(s) 274, 393, 660
FokI GGATG 1 cut(s) 234
Fsp4HI GCNGC 3 cut(s) 274, 393, 660
FspBI CTAG 2 cut(s) 38, 404
GluI GCNGC 3 cut(s) 274, 393, 660
HaeIII GGCC 3 cut(s) 166, 611, 662
Hin1II CATG 1 cut(s) 637
HinfI GANTC 4 cut(s) 44, 469, 638, 697
Hpy166II GTNNAC 1 cut(s) 742
Hpy188I TCNGA 2 cut(s) 364, 421
Hpy188III TCNNGA 6 cut(s) 325, 331, 371, 453, 493, 719
Hpy8I GTNNAC 1 cut(s) 742
Hpy99I CGWCG 1 cut(s) 26
HpyAV CCTTC 4 cut(s) 5, 581, 715, 716
HpyCH4III ACNGT 4 cut(s) 229, 380, 531, 559
HpyCH4V TGCA 7 cut(s) 206, 217, 225, 273, 285, 597, 676
HpyF10VI GCNNNNNNNGC 2 cut(s) 282, 389
HpyF3I CTNAG 3 cut(s) 198, 420, 627
Hsp92II CATG 1 cut(s) 637
Kzo9I GATC 4 cut(s) 142, 210, 327, 701
LmnI GCTCC 1 cut(s) 476
Lsp1109I GCAGC 2 cut(s) 285, 404
LweI GCATC 3 cut(s) 212, 365, 663
MaeI CTAG 2 cut(s) 38, 404
MalI GATC 4 cut(s) 144, 212, 329, 703
MboI GATC 4 cut(s) 142, 210, 327, 701
MboII GAAGA 6 cut(s) 29, 95, 326, 351, 563, 575
MfeI CAATTG 1 cut(s) 155
MflI RGATCY 2 cut(s) 210, 327
MhlI GDGCHC 1 cut(s) 324
MlsI TGGCCA 1 cut(s) 166
MluCI AATT 6 cut(s) 64, 155, 415, 496, 599, 686
MluNI TGGCCA 1 cut(s) 166
MlyI GAGTC 1 cut(s) 691
MnlI CCTC 3 cut(s) 128, 449, 730
Mox20I TGGCCA 1 cut(s) 166
MroXI GAANNNNTTC 2 cut(s) 567, 570
MscI TGGCCA 1 cut(s) 166
MseI TTAA 1 cut(s) 299
Msp20I TGGCCA 1 cut(s) 166
MspA1I CMGCKG 2 cut(s) 73, 395
MspR9I CCNGG 1 cut(s) 168
MunI CAATTG 1 cut(s) 155
Mva1269I GAATGC 1 cut(s) 208
MvaI CCWGG 1 cut(s) 168
MwoI GCNNNNNNNGC 2 cut(s) 282, 389
NcoI CCATGG 1 cut(s) 633
NdeII GATC 4 cut(s) 142, 210, 327, 701
NlaIII CATG 1 cut(s) 637
PctI GAATGC 1 cut(s) 208
PdmI GAANNNNTTC 2 cut(s) 567, 570
PfeI GAWTC 3 cut(s) 44, 469, 638
PkrI GCNGC 3 cut(s) 275, 394, 661
PleI GAGTC 1 cut(s) 691
PpsI GAGTC 1 cut(s) 691
PsiI TTATAA 1 cut(s) 518
Psp6I CCWGG 1 cut(s) 166
PspGI CCWGG 1 cut(s) 166
PspPI GGNCC 1 cut(s) 661
PsuI RGATCY 2 cut(s) 210, 327
PvuII CAGCTG 1 cut(s) 73
SaqAI TTAA 1 cut(s) 299
SatI GCNGC 3 cut(s) 274, 393, 660
Sau3AI GATC 4 cut(s) 142, 210, 327, 701
Sau96I GGNCC 1 cut(s) 661
SchI GAGTC 1 cut(s) 691
ScrFI CCNGG 1 cut(s) 168
SduI GDGCHC 1 cut(s) 324
SetI ASST 6 cut(s) 75, 195, 351, 481, 741, 747
SfaNI GCATC 3 cut(s) 212, 365, 663
SfcI CTRYAG 1 cut(s) 746
SmlI CTYRAG 2 cut(s) 96, 323
SmoI CTYRAG 2 cut(s) 96, 323
Sse9I AATT 6 cut(s) 64, 155, 415, 496, 599, 686
SsiI CCGC 2 cut(s) 395, 659
SspMI CTAG 2 cut(s) 38, 404
StyD4I CCNGG 1 cut(s) 166
StyI CCWWGG 1 cut(s) 633
TaaI ACNGT 4 cut(s) 229, 380, 531, 559
TaqI TCGA 5 cut(s) 57, 462, 574, 700, 720
TasI AATT 6 cut(s) 64, 155, 415, 496, 599, 686
TauI GCSGC 1 cut(s) 662
TfiI GAWTC 3 cut(s) 44, 469, 638
Tru1I TTAA 1 cut(s) 299
Tru9I TTAA 1 cut(s) 299
TscAI CASTG 3 cut(s) 139, 232, 562
TseI GCWGC 2 cut(s) 273, 392
TspDTI ATGAA 5 cut(s) 43, 327, 592, 630, 699
TspRI CASTG 3 cut(s) 139, 232, 562
XapI RAATTY 2 cut(s) 415, 599
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XmnI GAANNNNTTC 2 cut(s) 567, 570
XspI CTAG 2 cut(s) 38, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.