Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0004027

Physical Location & Seq

Genomic Coordinates Forward (+)

3363339 .. 3367104

Gene Structure 3766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g03490.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGAAAGACCCTGTGACAACCATTACAGGTATCACGTATGACCGGGAGAGTATCGAGCACTGGCTATTCCAGAGCAAGAACATCACATGTCCTGCCACCAAACAGCCGCTCCCGAAAGACTCCGAACTAACCCCCAACCACACGTTGCGCCGCTTAATTCAGGCGTGGTGCACTGACAATGCCTCCTACGGCATTGATCGAATACCAACTCCGAAACCACCTCTCAACAAGGCTCAAGTCCTCAAACTCCTCAAGGACCTTTGGCACCCTCAGCTCCAGCTGAAGATTATTCAAAAGTTGGAGCTCCTCGCGGTGGAAAACGAAGGGAATAGGAAGTACATGGTGGAAGCCGGAGTGGCTAAGGCCATGTTGTTTTTCATTACGAACATATGTTACAAGAACGGCCAGGTGGATGGCCTAGAAGACGCCCTTAGCATACTTCACTTTGTTCGGATTTCGTCCGAAGAATTAAACCGTCTCTTTATGGAAAACGATCAGATCATCAATTCGTTGACATGGGTTTTTGGTTGCGAAACGGAGAATCAAATCGCGGTCAGTACGCAAGCGGTGTTGGTGCTCAAAAATATCATCCAAAAGGCAAACTCAACCGTGCTGGAAACCCTAAACCCTAATTTTTTTAAGAAACTTGTTGGGATTTTGAGAAATGGGGTCACACAACAAGGGGTGAATGCAGCTCTACATGTCATGTTAGACGCTTGTCCTTGGGGAAGAAATCGAATCAAGATGGTCGAAGCCGGGGCTGTTTACGAGCTCATCGAGCTTGAATTTGGTGCTCCAGAAAAGAGAACAGAGCTCATTTTTGGTATATTGTTTCATTTGTGTTCTTGTGCTGATGGGAGAGCCCAGTTTCTTAGTCACAAAGGAGGCATCTCTGTTGTGTCAAAGAGACTCCTTAGGGTTTCTCCAACAACTGATGACCGAGCAGTTTCGATCCTTTCTATGGTAAGCAAGTACTCAGGAACCAACTTGGTGCTTCAGGAGATGTTGGAGGTTGGAGCTGTGCGTAGGCTTTGTACTTTGCTCCAAGTTGACTGTGCTCCATACTTGAAAGACAAAGCAAGGGAAATCCTTAAATCACATCATGAGGAGTGGAAGAACTGTCCTTGTCTTGGTATGTCTCTGATCAGCGTCGGGACTCCAGCGAAGTCGTTCTACATGGTGCTCGACACCGGCAGCGACGGCAACTGGCTTCAGTGCAGCCCCTGCTCCGATTGCTACCAACAATCTGACCCGATTTTCAACCCAGCCGGATCTTCCACCTACAGCCAGCTCTCGGGCTCGATTAACAAAATCGCGTTGGGATGCGGACACGATAACGAGGGATTAGGTGATGAGAGTGGAGAAGAGGAAAGTGGTTGGGAGGCTCGGCTCAGGAGGGAGAAGAAGGGTGGGGAGAGGTTGTGGGGAAGGTGGGGTGGGTTGGGGGATTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009987 GO:0010033 GO:0010035 GO:0010200 GO:0010243 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051865 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

U-box

Protein Analysis

485

Amino Acids

53.97

Weight (kDa)

6.57

Isoelectric Point (pI)

43.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11840
fragaria_vesca	FvH4_3g26390 FvH4_6g20390
malus_domestica	MD11G1173500.v1.1 MD12G1040800.v1.1 MD14G1039900.v1.1
prunus_persica	Prupe.6G145200_v2.0.a1 Prupe.6G145200_v2.0.a1 Prupe.7G094100_v2.0.a1
pyrus_communis	pycom11g14800 pycom12g03490 pycom14g03410
rosa_chinensis	RchiOBHm_Chr3g0476021 RchiOBHm_Chr5g0048571
rosa_laevigata	RLG00000023791 RLG00000034535
rosa_multiflora	Rmu_sc0000585.1_g000008 Rmu_sc0007341.1_g000034
rosa_roxburghii	Rroxscaffold_1G00033260 Rroxscaffold_6G00405500
rosa_rugosa	Rorug03G0152800 Rorug05G0239500
rosa_samantha	Rh3AG203700 Rh3BG233600 Rh3CG229000 Rh3DG229100 Rh5AG319200 Rh5BG329600 Rh5CG355500 Rh5DG340800
rosa_wichuraiana	Rw0G021240 Rw3G018510 Rw5G029850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	264
AccBSI	CCGCTC	1 cut(s)	109
AccII	CGCG	3 cut(s)	311, 551, 1316
AciI	CCGC	6 cut(s)	107, 151, 311, 551, 566, 1326
AclWI	GGATC	2 cut(s)	946, 1279
AcoI	YGGCCR	1 cut(s)	403
AcsI	RAATTY	1 cut(s)	785
AcuI	CTGAAG	3 cut(s)	302, 980, 1196
AcyI	GRCGYC	1 cut(s)	426
AfaI	GTAC	4 cut(s)	338, 559, 974, 1036
AfiI	CCNNNNNNNGG	4 cut(s)	313, 961, 1130, 1294
AflIII	ACRYGT	3 cut(s)	86, 141, 700
AgsI	TTSAA	4 cut(s)	293, 785, 1069, 1261
AjnI	CCWGG	1 cut(s)	405
AluBI	AGCT	9 cut(s)	274, 280, 304, 695, 772, 781, 814, 1019, 1291
AluI	AGCT	9 cut(s)	274, 280, 304, 695, 772, 781, 814, 1019, 1291
Alw21I	GWGCWC	9 cut(s)	60, 173, 306, 579, 774, 796, 816, 1060, 1185
Alw26I	GTCTC	3 cut(s)	482, 901, 1143
Alw44I	GTGCAC	1 cut(s)	169
AlwI	GGATC	2 cut(s)	946, 1279
AlwNI	CAGNNNCTG	1 cut(s)	1224
Ama87I	CYCGRG	1 cut(s)	1294
AoxI	GGCC	3 cut(s)	363, 403, 415
ApaLI	GTGCAC	1 cut(s)	169
ApeKI	GCWGC	3 cut(s)	692, 1194, 1218
ApoI	RAATTY	1 cut(s)	785
Asp700I	GAANNNNTTC	1 cut(s)	1169
AspLEI	GCGC	1 cut(s)	150
AspS9I	GGNCC	1 cut(s)	256
AsuC2I	CCSGG	2 cut(s)	44, 757
AsuHPI	GGTGA	2 cut(s)	697, 1361
AvaI	CYCGRG	1 cut(s)	1294
AvaII	GGWCC	1 cut(s)	256
AxyI	CCTNAGG	1 cut(s)	914
BaeGI	GKGCMC	1 cut(s)	173
BanI	GGYRCC	1 cut(s)	264
BanII	GRGCYC	5 cut(s)	306, 774, 816, 865, 1301
BarI	GAAGNNNNNNTAC	2 cut(s)	1157, 1189
BbsI	GAAGAC	1 cut(s)	429
Bbv12I	GWGCWC	9 cut(s)	60, 173, 306, 579, 774, 796, 816, 1060, 1185
BbvCI	CCTCAGC	1 cut(s)	270
BbvI	GCAGC	3 cut(s)	704, 1206, 1230
BccI	CCATC	3 cut(s)	407, 739, 848
BceAI	ACGGC	3 cut(s)	205, 418, 1216
BciT130I	CCWGG	1 cut(s)	407
BclI	TGATCA	1 cut(s)	1143
BcnI	CCSGG	2 cut(s)	44, 757
BcoDI	GTCTC	3 cut(s)	482, 901, 1143
BfaI	CTAG	1 cut(s)	419
BfmI	CTRYAG	1 cut(s)	1282
BglI	GCCNNNNNGGC	1 cut(s)	356
BisI	GCNGC	5 cut(s)	107, 151, 693, 1195, 1219
BlsI	GCNGC	5 cut(s)	108, 152, 694, 1196, 1220
BmcAI	AGTACT	1 cut(s)	974
Bme1390I	CCNGG	3 cut(s)	44, 407, 757
Bme18I	GGWCC	1 cut(s)	256
BmeT110I	CYCGRG	1 cut(s)	1294
BmgT120I	GGNCC	1 cut(s)	256
BmiI	GGNNCC	2 cut(s)	266, 982
BmrFI	CCNGG	3 cut(s)	44, 407, 757
BmrI	ACTGGG	1 cut(s)	859
BmsI	GCATC	2 cut(s)	897, 1313
BmuI	ACTGGG	1 cut(s)	859
BoxI	GACNNNNGTC	1 cut(s)	717
BpiI	GAAGAC	1 cut(s)	429
BpmI	CTGGAG	3 cut(s)	260, 780, 1143
Bpu10I	CCTNAGC	4 cut(s)	270, 360, 431, 1391
BpuEI	CTTGAG	2 cut(s)	219, 236
BpuMI	CCSGG	2 cut(s)	44, 757
BsaAI	YACGTR	1 cut(s)	36
BsaHI	GRCGYC	1 cut(s)	426
BsaJI	CCNNGG	2 cut(s)	722, 756
BsaXI	ACNNNNNCTCC	6 cut(s)	93, 123, 167, 197, 1406, 1436
Bsc4I	CCNNNNNNNGG	4 cut(s)	313, 961, 1130, 1294
Bse118I	RCCGGY	1 cut(s)	1190
Bse1I	ACTGG	3 cut(s)	65, 865, 1211
Bse21I	CCTNAGG	1 cut(s)	914
BseBI	CCWGG	1 cut(s)	407
BseDI	CCNNGG	2 cut(s)	722, 756
BseGI	GGATG	3 cut(s)	418, 588, 1328
BseLI	CCNNNNNNNGG	4 cut(s)	313, 961, 1130, 1294
BseMII	CTCAG	3 cut(s)	284, 990, 1405
BseNI	ACTGG	3 cut(s)	65, 865, 1211
BseRI	GAGGAG	3 cut(s)	239, 296, 1121
BseSI	GKGCMC	1 cut(s)	173
BseXI	GCAGC	3 cut(s)	704, 1206, 1230
BseYI	CCCAGC	1 cut(s)	1264
BsgI	GTGCAG	1 cut(s)	1237
Bsh1236I	CGCG	3 cut(s)	311, 551, 1316
BshFI	GGCC	3 cut(s)	365, 405, 417
BshNI	GGYRCC	1 cut(s)	264
BsiHKAI	GWGCWC	9 cut(s)	60, 173, 306, 579, 774, 796, 816, 1060, 1185
BsiHKCI	CYCGRG	1 cut(s)	1294
BsiSI	CCGG	5 cut(s)	43, 351, 756, 1191, 1269
BslFI	GGGAC	1 cut(s)	1168
BslI	CCNNNNNNNGG	4 cut(s)	313, 961, 1130, 1294
BsmAI	GTCTC	3 cut(s)	482, 901, 1143
BsmBI	CGTCTC	1 cut(s)	482
BsmFI	GGGAC	1 cut(s)	1168
BsmI	GAATGC	1 cut(s)	694
BsnI	GGCC	3 cut(s)	365, 405, 417
BsoBI	CYCGRG	1 cut(s)	1294
Bsp143I	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
BspACI	CCGC	6 cut(s)	107, 151, 311, 551, 566, 1326
BspANI	GGCC	3 cut(s)	365, 405, 417
BspCNI	CTCAG	3 cut(s)	283, 989, 1404
BspFNI	CGCG	3 cut(s)	311, 551, 1316
BspHI	TCATGA	1 cut(s)	1102
BspLI	GGNNCC	2 cut(s)	266, 982
BspPI	GGATC	2 cut(s)	946, 1279
BspT107I	GGYRCC	1 cut(s)	264
BsrBI	CCGCTC	1 cut(s)	109
BsrFI	RCCGGY	1 cut(s)	1190
BsrI	ACTGG	3 cut(s)	65, 865, 1211
BssAI	RCCGGY	1 cut(s)	1190
BssECI	CCNNGG	2 cut(s)	722, 756
BssMI	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
BssNI	GRCGYC	1 cut(s)	426
BssT1I	CCWWGG	1 cut(s)	722
Bst2UI	CCWGG	1 cut(s)	407
Bst4CI	ACNGT	4 cut(s)	476, 610, 1055, 1121
Bst6I	CTCTTC	1 cut(s)	1359
BstACI	GRCGYC	1 cut(s)	426
BstAPI	GCANNNNNTGC	1 cut(s)	1224
BstBAI	YACGTR	1 cut(s)	36
BstC8I	GCNNGC	2 cut(s)	564, 1289
BstDEI	CTNAG	7 cut(s)	270, 360, 431, 872, 914, 976, 1391
BstF5I	GGATG	3 cut(s)	418, 588, 1328
BstFNI	CGCG	3 cut(s)	311, 551, 1316
BstHHI	GCGC	1 cut(s)	150
BstKTI	GATC	6 cut(s)	199, 496, 501, 954, 1146, 1274
BstMAI	GTCTC	3 cut(s)	482, 901, 1143
BstMBI	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
BstMWI	GCNNNNNNNGC	6 cut(s)	271, 356, 778, 1200, 1224, 1233
BstNI	CCWGG	1 cut(s)	407
BstNSI	RCATGY	2 cut(s)	90, 704
BstPAI	GACNNNNGTC	1 cut(s)	717
BstSCI	CCNGG	3 cut(s)	42, 405, 755
BstSFI	CTRYAG	1 cut(s)	1282
BstSLI	GKGCMC	1 cut(s)	173
BstUI	CGCG	3 cut(s)	311, 551, 1316
BstV1I	GCAGC	3 cut(s)	704, 1206, 1230
BstV2I	GAAGAC	1 cut(s)	429
BstX2I	RGATCY	1 cut(s)	1271
BstXI	CCANNNNNNTGG	1 cut(s)	413
BstYI	RGATCY	1 cut(s)	1271
Bsu36I	CCTNAGG	1 cut(s)	914
BsuRI	GGCC	3 cut(s)	365, 405, 417
BtsCI	GGATG	3 cut(s)	418, 588, 1328
BtsIMutI	CAGTG	3 cut(s)	58, 171, 1220
Cac8I	GCNNGC	2 cut(s)	564, 1289
CaiI	CAGNNNCTG	1 cut(s)	1224
CciI	TCATGA	1 cut(s)	1102
CfoI	GCGC	1 cut(s)	150
Cfr10I	RCCGGY	1 cut(s)	1190
Cfr13I	GGNCC	1 cut(s)	256
CseI	GACGC	3 cut(s)	434, 722, 1138
Csp6I	GTAC	4 cut(s)	337, 558, 973, 1035
CviAII	CATG	8 cut(s)	87, 340, 367, 516, 701, 706, 1103, 1177
CviQI	GTAC	4 cut(s)	337, 558, 973, 1035
DdeI	CTNAG	7 cut(s)	270, 360, 431, 872, 914, 976, 1391
DpnI	GATC	6 cut(s)	198, 495, 500, 953, 1145, 1273
DpnII	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
EaeI	YGGCCR	1 cut(s)	403
Eam1104I	CTCTTC	1 cut(s)	1359
EarI	CTCTTC	1 cut(s)	1359
Ecl136II	GAGCTC	3 cut(s)	304, 772, 814
Eco130I	CCWWGG	1 cut(s)	722
Eco24I	GRGCYC	5 cut(s)	306, 774, 816, 865, 1301
Eco47I	GGWCC	1 cut(s)	256
Eco53kI	GAGCTC	3 cut(s)	304, 772, 814
Eco57I	CTGAAG	3 cut(s)	302, 980, 1196
Eco81I	CCTNAGG	1 cut(s)	914
Eco88I	CYCGRG	1 cut(s)	1294
EcoICRI	GAGCTC	3 cut(s)	304, 772, 814
EcoO109I	RGGNCCY	1 cut(s)	256
EcoRII	CCWGG	1 cut(s)	405
EcoT14I	CCWWGG	1 cut(s)	722
EcoT38I	GRGCYC	5 cut(s)	306, 774, 816, 865, 1301
ErhI	CCWWGG	1 cut(s)	722
Esp3I	CGTCTC	1 cut(s)	482
FaeI	CATG	8 cut(s)	90, 343, 370, 519, 704, 709, 1106, 1180
FalI	AAGNNNNNCTT	2 cut(s)	414, 446
FaqI	GGGAC	1 cut(s)	1168
FatI	CATG	8 cut(s)	86, 339, 366, 515, 700, 705, 1102, 1176
FauNDI	CATATG	1 cut(s)	389
FbaI	TGATCA	1 cut(s)	1143
Fnu4HI	GCNGC	5 cut(s)	107, 151, 693, 1195, 1219
FokI	GGATG	3 cut(s)	425, 575, 1335
FriOI	GRGCYC	5 cut(s)	306, 774, 816, 865, 1301
Fsp4HI	GCNGC	5 cut(s)	107, 151, 693, 1195, 1219
FspBI	CTAG	1 cut(s)	419
GlaI	GCGC	1 cut(s)	149
GluI	GCNGC	5 cut(s)	107, 151, 693, 1195, 1219
GsaI	CCCAGC	1 cut(s)	1268
GsuI	CTGGAG	3 cut(s)	260, 780, 1143
HaeIII	GGCC	3 cut(s)	365, 405, 417
HapII	CCGG	5 cut(s)	43, 351, 756, 1191, 1269
HgaI	GACGC	3 cut(s)	434, 722, 1138
HhaI	GCGC	1 cut(s)	150
Hin1I	GRCGYC	1 cut(s)	426
Hin1II	CATG	8 cut(s)	90, 343, 370, 519, 704, 709, 1106, 1180
Hin6I	GCGC	1 cut(s)	148
HinP1I	GCGC	1 cut(s)	148
HincII	GTYRAC	2 cut(s)	513, 1051
HindII	GTYRAC	2 cut(s)	513, 1051
HinfI	GANTC	5 cut(s)	119, 541, 738, 909, 1156
HpaII	CCGG	5 cut(s)	43, 351, 756, 1191, 1269
HphI	GGTGA	2 cut(s)	697, 1361
Hpy166II	GTNNAC	4 cut(s)	171, 513, 766, 1051
Hpy188I	TCNGA	8 cut(s)	124, 213, 453, 463, 498, 1143, 1231, 1249
Hpy188III	TCNNGA	9 cut(s)	70, 112, 742, 797, 978, 998, 1103, 1153, 1393
Hpy8I	GTNNAC	4 cut(s)	171, 513, 766, 1051
Hpy99I	CGWCG	2 cut(s)	1154, 1202
HpyAV	CCTTC	3 cut(s)	317, 1399, 1422
HpyCH4III	ACNGT	4 cut(s)	476, 610, 1055, 1121
HpyCH4IV	ACGT	2 cut(s)	35, 143
HpyCH4V	TGCA	3 cut(s)	171, 692, 1218
HpyF10VI	GCNNNNNNNGC	6 cut(s)	271, 356, 778, 1200, 1224, 1233
HpyF3I	CTNAG	7 cut(s)	270, 360, 431, 872, 914, 976, 1391
HpySE526I	ACGT	2 cut(s)	35, 143
Hsp92I	GRCGYC	1 cut(s)	426
Hsp92II	CATG	8 cut(s)	90, 343, 370, 519, 704, 709, 1106, 1180
HspAI	GCGC	1 cut(s)	148
Ksp22I	TGATCA	1 cut(s)	1143
Kzo9I	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
LmnI	GCTCC	9 cut(s)	114, 279, 301, 309, 799, 1016, 1047, 1063, 1232
Lsp1109I	GCAGC	3 cut(s)	704, 1206, 1230
LweI	GCATC	2 cut(s)	897, 1313
MaeI	CTAG	1 cut(s)	419
MaeII	ACGT	2 cut(s)	35, 143
MaeIII	GTNAC	4 cut(s)	13, 392, 670, 875
MalI	GATC	6 cut(s)	198, 495, 500, 953, 1145, 1273
MbiI	CCGCTC	1 cut(s)	109
MboI	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
MboII	GAAGA	8 cut(s)	295, 434, 476, 741, 1126, 1266, 1376, 1414
MflI	RGATCY	1 cut(s)	1271
MluCI	AATT	5 cut(s)	156, 467, 505, 631, 785
MlyI	GAGTC	3 cut(s)	113, 903, 1150
MmeI	TCCRAC	4 cut(s)	279, 950, 987, 994
MroXI	GAANNNNTTC	1 cut(s)	1169
MseI	TTAA	5 cut(s)	155, 470, 639, 1092, 1305
MspA1I	CMGCKG	1 cut(s)	280
MspI	CCGG	5 cut(s)	43, 351, 756, 1191, 1269
MspR9I	CCNGG	3 cut(s)	44, 407, 757
Mva1269I	GAATGC	1 cut(s)	694
MvaI	CCWGG	1 cut(s)	407
MvnI	CGCG	3 cut(s)	311, 551, 1316
MwoI	GCNNNNNNNGC	6 cut(s)	271, 356, 778, 1200, 1224, 1233
NciI	CCSGG	2 cut(s)	44, 757
NdeI	CATATG	1 cut(s)	389
NdeII	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
NlaIII	CATG	8 cut(s)	90, 343, 370, 519, 704, 709, 1106, 1180
NlaIV	GGNNCC	2 cut(s)	266, 982
NmeAIII	GCCGAG	1 cut(s)	1366
NmuCI	GTSAC	3 cut(s)	13, 670, 875
NspI	RCATGY	2 cut(s)	90, 704
PagI	TCATGA	1 cut(s)	1102
PciI	ACATGT	2 cut(s)	86, 700
PcsI	WCGNNNNNNNCGW	1 cut(s)	774
PctI	GAATGC	1 cut(s)	694
PdmI	GAANNNNTTC	1 cut(s)	1169
PfeI	GAWTC	2 cut(s)	541, 738
PkrI	GCNGC	5 cut(s)	108, 152, 694, 1196, 1220
PleI	GAGTC	3 cut(s)	113, 903, 1150
PpsI	GAGTC	3 cut(s)	113, 903, 1150
Ppu21I	YACGTR	1 cut(s)	36
PpuMI	RGGWCCY	1 cut(s)	256
PscI	ACATGT	2 cut(s)	86, 700
PshAI	GACNNNNGTC	1 cut(s)	717
Psp124BI	GAGCTC	3 cut(s)	306, 774, 816
Psp5II	RGGWCCY	1 cut(s)	256
Psp6I	CCWGG	1 cut(s)	405
PspFI	CCCAGC	1 cut(s)	1264
PspGI	CCWGG	1 cut(s)	405
PspN4I	GGNNCC	2 cut(s)	266, 982
PspPI	GGNCC	1 cut(s)	256
PspPPI	RGGWCCY	1 cut(s)	256
PsrI	GAACNNNNNNTAC	2 cut(s)	377, 409
PstNI	CAGNNNCTG	1 cut(s)	1224
PsuI	RGATCY	1 cut(s)	1271
PvuII	CAGCTG	1 cut(s)	280
RsaI	GTAC	4 cut(s)	338, 559, 974, 1036
RsaNI	GTAC	4 cut(s)	337, 558, 973, 1035
SacI	GAGCTC	3 cut(s)	306, 774, 816
SaqAI	TTAA	5 cut(s)	155, 470, 639, 1092, 1305
SatI	GCNGC	5 cut(s)	107, 151, 693, 1195, 1219
Sau3AI	GATC	6 cut(s)	196, 493, 498, 951, 1143, 1271
Sau96I	GGNCC	1 cut(s)	256
ScaI	AGTACT	1 cut(s)	974
SchI	GAGTC	3 cut(s)	113, 903, 1150
ScrFI	CCNGG	3 cut(s)	44, 407, 757
SfaNI	GCATC	2 cut(s)	897, 1313
SfcI	CTRYAG	1 cut(s)	1282
SinI	GGWCC	1 cut(s)	256
SmlI	CTYRAG	2 cut(s)	234, 251
SmoI	CTYRAG	2 cut(s)	234, 251
Sse9I	AATT	5 cut(s)	156, 467, 505, 631, 785
SsiI	CCGC	6 cut(s)	107, 151, 311, 551, 566, 1326
SspMI	CTAG	1 cut(s)	419
SstI	GAGCTC	3 cut(s)	306, 774, 816
StyD4I	CCNGG	3 cut(s)	42, 405, 755
StyI	CCWWGG	1 cut(s)	722
TaaI	ACNGT	4 cut(s)	476, 610, 1055, 1121
TaiI	ACGT	2 cut(s)	38, 146
TaqI	TCGA	8 cut(s)	54, 199, 736, 750, 777, 950, 1185, 1301
TaqII	GACCGA	1 cut(s)	954
TasI	AATT	5 cut(s)	156, 467, 505, 631, 785
TatI	WGTACW	3 cut(s)	336, 972, 1034
TauI	GCSGC	2 cut(s)	109, 153
TfiI	GAWTC	2 cut(s)	541, 738
Tru1I	TTAA	5 cut(s)	155, 470, 639, 1092, 1305
Tru9I	TTAA	5 cut(s)	155, 470, 639, 1092, 1305
TscAI	CASTG	3 cut(s)	65, 178, 1220
TseFI	GTSAC	3 cut(s)	13, 670, 875
TseI	GCWGC	3 cut(s)	692, 1194, 1218
Tsp45I	GTSAC	3 cut(s)	13, 670, 875
TspDTI	ATGAA	3 cut(s)	17, 367, 824
TspGWI	ACGGA	1 cut(s)	551
TspRI	CASTG	3 cut(s)	65, 178, 1220
VneI	GTGCAC	1 cut(s)	169
VpaK11BI	GGWCC	1 cut(s)	256
XapI	RAATTY	1 cut(s)	785
XceI	RCATGY	2 cut(s)	90, 704
XmnI	GAANNNNTTC	1 cut(s)	1169
XspI	CTAG	1 cut(s)	419
ZrmI	AGTACT	1 cut(s)	974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.