pycom12g03940

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
3819490 .. 3821414
1925 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g03940.5

Sequence Viewer

Length: 1326 bp
ATGAGATCGATCCTAATCAACCCTTCTCTTCTGTTTCTGGATGAACCAACTTCCGGCTTGGATTCTACAACTGCACTGCGAATTGGTCAGATGTTACAAGACATAGCAGAGGCTGGCAAGACTGTGGTGACAACAATCCACCAGCCATCAAGTCGACTCTTCCACAAATTTGACAAGTTGATCCTTCTTGGGAAGGGAAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGGTGTACTTCTCATCCATAGGATGTTCTCCACTTATTGCCATGAACCCAGCAGAGTTCTTGTTAGACCTTGCAAACGGAAATTTAAATGATATTTCAGTACCATCAGAATTAGAGGATAAGGTGCAAATGGGAAATTCAGAAGCAGATGATACAAGAAATGGAAAGCTATCTCCAGCAGTTGTGCATGAGTATCTTGTGGAGTCATACGAGGCACAAGTTGCAAACAAGGAGAAGAAGAAGCTTATGGCTCCCCTTCCCATCGATGAGGAACTGAAGTCAAAGATGTCATTTTCGAAGCGAGAATGGGGAACAAGCTGGTGGGAGCAATTTTCTATCTTGTTCTGGAGAGGAATTAAGGAAAGGAGGCATGACTACTTCAGCTGGTTGAGATTCACCCAAGTGCTCTCCACCGCGATGGTTTTGGGCTTGCTCTGGTGGCAGTCAGATGCTAACAATCCCAAAGGCCGGGAGGATCAGGCAGGGTTGCTTTTCTTCATTTCTGTTTTCTGGGGATTTTTACCCGTCTTCACAGCAATCTTCACATTTCCTCAAGAAAAAGCAATGCTGGTGAAGGAACGATCGGCTGACATGTACAGATTAAGTGCATATTTTGCTTCTAGGACTACTAGTGACCTCCCACTGGATCTAATGCTACCAGTTATGTTCCTCGTCGTTGTATATTTCATGGCTGGCTTAAGGCTGAGTGCTGAAACCTTCTTCCTAAGCATGCTTACGGTTTTCCTCTGCATTGTGGCAGCACAGGGACTTGGACTTGCTATCGGAGCTACATTGATGGACCTAAAGAAAGCCACAACTCTTGCATCAGTAATTGTGATGACATTCATGCTTGCTGGAGGGTTCTTTGTGAAAGAAGTTCCGGTGTTCATATCTTGGATTCGGTACATGTCTTTTGACTACCACACATACAGGATTCTTCTTAAGGTGCAGTACGAACACATCGCACCGACTGTTCACGGGTTGACCACAGACTGCGGTTTAACAGAAGTTGGTGCCCTTGTAGCCATGGTTTTTGGATACCGGCTCTTGGCATACCTTTCTTTGCGAAGAATGAAGCTTCAAGGTGGGGCATAG

Protein Analysis

442

Amino Acids

49.63

Weight (kDa)

7.06

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1244
AccI GTMKAC 1 cut(s) 154
AccII CGCG 1 cut(s) 647
AciI CCGC 2 cut(s) 645, 1227
AclWI GGATC 4 cut(s) 4, 175, 714, 885
AcsI RAATTY 3 cut(s) 167, 313, 367
AcuI CTGAAG 2 cut(s) 527, 595
AfaI GTAC 5 cut(s) 239, 333, 827, 1136, 1184
AfiI CCNNNNNNNGG 4 cut(s) 53, 699, 874, 1279
AflII CTTAAG 2 cut(s) 928, 1172
AflIII ACRYGT 2 cut(s) 822, 1137
AgsI TTSAA 1 cut(s) 1313
AhlI ACTAGT 1 cut(s) 860
AleI CACNNNNGTG 1 cut(s) 632
AluBI AGCT 7 cut(s) 201, 400, 475, 549, 615, 1019, 1309
AluI AGCT 7 cut(s) 201, 400, 475, 549, 615, 1019, 1309
Alw21I GWGCWC 1 cut(s) 639
AlwI GGATC 4 cut(s) 4, 175, 714, 885
AlwNI CAGNNNCTG 1 cut(s) 113
AoxI GGCC 1 cut(s) 697
ApeKI GCWGC 1 cut(s) 989
ApoI RAATTY 3 cut(s) 167, 313, 367
AspS9I GGNCC 1 cut(s) 1030
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 3 cut(s) 139, 619, 814
AsuII TTCGAA 1 cut(s) 527
AvaII GGWCC 1 cut(s) 1030
BaeGI GKGCMC 1 cut(s) 1249
BanI GGYRCC 1 cut(s) 1244
BbsI GAAGAC 1 cut(s) 751
Bbv12I GWGCWC 1 cut(s) 639
BbvI GCAGC 1 cut(s) 1001
BccI CCATC 5 cut(s) 154, 343, 500, 643, 1021
BciVI GTATCC 1 cut(s) 1262
BcnI CCSGG 1 cut(s) 701
BcuI ACTAGT 1 cut(s) 860
BfaI CTAG 2 cut(s) 852, 861
BfrI CTTAAG 2 cut(s) 928, 1172
BfuI GTATCC 1 cut(s) 1262
BisI GCNGC 1 cut(s) 990
BlsI GCNGC 1 cut(s) 991
Bme1390I CCNGG 1 cut(s) 701
Bme18I GGWCC 1 cut(s) 1030
BmgT120I GGNCC 1 cut(s) 1030
BmiI GGNNCC 2 cut(s) 483, 1246
BmrFI CCNGG 1 cut(s) 701
BmsI GCATC 3 cut(s) 230, 670, 1064
BpiI GAAGAC 1 cut(s) 751
BpmI CTGGAG 3 cut(s) 390, 598, 1107
Bpu10I CCTNAGC 1 cut(s) 956
Bpu14I TTCGAA 1 cut(s) 527
BpuEI CTTGAG 1 cut(s) 768
BpuMI CCSGG 1 cut(s) 701
Bsa29I ATCGAT 2 cut(s) 8, 495
BsaBI GATNNNNATC 1 cut(s) 14
BsaJI CCNNGG 1 cut(s) 1257
BsaWI WCCGGW 1 cut(s) 1111
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 699, 874, 1279
Bse118I RCCGGY 1 cut(s) 1272
Bse1I ACTGG 2 cut(s) 879, 890
Bse3DI GCAATG 2 cut(s) 237, 801
Bse8I GATNNNNATC 1 cut(s) 14
BseCI ATCGAT 2 cut(s) 8, 495
BseDI CCNNGG 1 cut(s) 1257
BseGI GGATG 3 cut(s) 46, 245, 260
BseJI GATNNNNATC 1 cut(s) 14
BseLI CCNNNNNNNGG 4 cut(s) 53, 699, 874, 1279
BseMI GCAATG 2 cut(s) 237, 801
BseMII CTCAG 1 cut(s) 926
BseNI ACTGG 2 cut(s) 879, 890
BseSI GKGCMC 1 cut(s) 1249
BseXI GCAGC 1 cut(s) 1001
BseYI CCCAGC 1 cut(s) 280
BsgI GTGCAG 2 cut(s) 57, 1199
Bsh1236I CGCG 1 cut(s) 647
Bsh1285I CGRYCG 1 cut(s) 815
BshFI GGCC 1 cut(s) 699
BshNI GGYRCC 1 cut(s) 1244
BshVI ATCGAT 2 cut(s) 8, 495
BsiEI CGRYCG 1 cut(s) 815
BsiHKAI GWGCWC 1 cut(s) 639
BsiSI CCGG 4 cut(s) 54, 700, 1112, 1273
BslFI GGGAC 1 cut(s) 1011
BslI CCNNNNNNNGG 4 cut(s) 53, 699, 874, 1279
BsmFI GGGAC 1 cut(s) 1011
BsnI GGCC 1 cut(s) 699
Bsp119I TTCGAA 1 cut(s) 527
Bsp1286I GDGCHC 2 cut(s) 639, 1249
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 6 cut(s) 5, 9, 180, 706, 812, 877
Bsp19I CCATGG 1 cut(s) 1257
BspACI CCGC 2 cut(s) 645, 1227
BspANI GGCC 1 cut(s) 699
BspCNI CTCAG 1 cut(s) 927
BspDI ATCGAT 2 cut(s) 8, 495
BspFNI CGCG 1 cut(s) 647
BspLI GGNNCC 2 cut(s) 483, 1246
BspPI GGATC 4 cut(s) 4, 175, 714, 885
BspT104I TTCGAA 1 cut(s) 527
BspT107I GGYRCC 1 cut(s) 1244
BspTI CTTAAG 2 cut(s) 928, 1172
BsrDI GCAATG 2 cut(s) 237, 801
BsrFI RCCGGY 1 cut(s) 1272
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 2 cut(s) 879, 890
BssAI RCCGGY 1 cut(s) 1272
BssECI CCNNGG 1 cut(s) 1257
BssMI GATC 6 cut(s) 5, 9, 180, 706, 812, 877
BssT1I CCWWGG 1 cut(s) 1257
Bst4CI ACNGT 3 cut(s) 124, 970, 1204
Bst6I CTCTTC 2 cut(s) 33, 164
BstAFI CTTAAG 2 cut(s) 928, 1172
BstAPI GCANNNNNTGC 2 cut(s) 452, 845
BstAUI TGTACA 1 cut(s) 825
BstBI TTCGAA 1 cut(s) 527
BstC8I GCNNGC 6 cut(s) 115, 203, 662, 925, 962, 1083
BstDEI CTNAG 2 cut(s) 935, 956
BstDSI CCRYGG 1 cut(s) 1257
BstF5I GGATG 3 cut(s) 46, 245, 260
BstFNI CGCG 1 cut(s) 647
BstKTI GATC 6 cut(s) 8, 12, 183, 709, 815, 880
BstMBI GATC 6 cut(s) 5, 9, 180, 706, 812, 877
BstMCI CGRYCG 1 cut(s) 815
BstMWI GCNNNNNNNGC 6 cut(s) 227, 452, 670, 845, 1016, 1253
BstNSI RCATGY 3 cut(s) 826, 964, 1141
BstSCI CCNGG 1 cut(s) 699
BstSLI GKGCMC 1 cut(s) 1249
BstUI CGCG 1 cut(s) 647
BstV1I GCAGC 1 cut(s) 1001
BstV2I GAAGAC 1 cut(s) 751
BstX2I RGATCY 1 cut(s) 877
BstXI CCANNNNNNTGG 1 cut(s) 649
BstYI RGATCY 1 cut(s) 877
Bsu15I ATCGAT 2 cut(s) 8, 495
BsuI GTATCC 1 cut(s) 1262
BsuRI GGCC 1 cut(s) 699
BsuTUI ATCGAT 2 cut(s) 8, 495
BtgI CCRYGG 1 cut(s) 1257
BtgZI GCGATG 2 cut(s) 662, 1177
BtsCI GGATG 3 cut(s) 46, 245, 260
BtsI GCAGTG 1 cut(s) 74
BtsIMutI CAGTG 2 cut(s) 74, 872
Cac8I GCNNGC 6 cut(s) 115, 203, 662, 925, 962, 1083
CaiI CAGNNNCTG 1 cut(s) 113
Cfr10I RCCGGY 1 cut(s) 1272
Cfr13I GGNCC 1 cut(s) 1030
ClaI ATCGAT 2 cut(s) 8, 495
Csp6I GTAC 5 cut(s) 238, 332, 826, 1135, 1183
CspCI CAANNNNNGTGG 2 cut(s) 1033, 1068
CviAII CATG 9 cut(s) 274, 419, 602, 823, 919, 961, 1078, 1138, 1258
CviQI GTAC 5 cut(s) 238, 332, 826, 1135, 1183
DdeI CTNAG 2 cut(s) 935, 956
DpnI GATC 6 cut(s) 7, 11, 182, 708, 814, 879
DpnII GATC 6 cut(s) 5, 9, 180, 706, 812, 877
DraI TTTAAA 1 cut(s) 318
Eam1104I CTCTTC 2 cut(s) 33, 164
EarI CTCTTC 2 cut(s) 33, 164
Eco130I CCWWGG 1 cut(s) 1257
Eco47I GGWCC 1 cut(s) 1030
Eco57I CTGAAG 2 cut(s) 527, 595
EcoT14I CCWWGG 1 cut(s) 1257
ErhI CCWWGG 1 cut(s) 1257
FaeI CATG 9 cut(s) 277, 422, 605, 826, 922, 964, 1081, 1141, 1261
FalI AAGNNNNNCTT 2 cut(s) 185, 217
FaqI GGGAC 1 cut(s) 1011
FatI CATG 9 cut(s) 273, 418, 601, 822, 918, 960, 1077, 1137, 1257
FblI GTMKAC 1 cut(s) 154
Fnu4HI GCNGC 1 cut(s) 990
FokI GGATG 3 cut(s) 53, 232, 267
Fsp4HI GCNGC 1 cut(s) 990
FspBI CTAG 2 cut(s) 852, 861
GluI GCNGC 1 cut(s) 990
GsaI CCCAGC 1 cut(s) 284
GsuI CTGGAG 3 cut(s) 390, 598, 1107
HaeIII GGCC 1 cut(s) 699
HapII CCGG 4 cut(s) 54, 700, 1112, 1273
Hin1II CATG 9 cut(s) 277, 422, 605, 826, 922, 964, 1081, 1141, 1261
HincII GTYRAC 2 cut(s) 155, 1215
HindII GTYRAC 2 cut(s) 155, 1215
HindIII AAGCTT 3 cut(s) 199, 473, 1307
HinfI GANTC 6 cut(s) 62, 156, 434, 624, 1129, 1165
HpaII CCGG 4 cut(s) 54, 700, 1112, 1273
HphI GGTGA 3 cut(s) 139, 619, 814
Hpy166II GTNNAC 4 cut(s) 155, 238, 1207, 1215
Hpy188I TCNGA 6 cut(s) 90, 226, 340, 373, 679, 1016
Hpy188III TCNNGA 3 cut(s) 38, 577, 785
Hpy8I GTNNAC 4 cut(s) 155, 238, 1207, 1215
Hpy99I CGWCG 1 cut(s) 908
HpyAV CCTTC 6 cut(s) 33, 187, 194, 497, 799, 958
HpyCH4III ACNGT 3 cut(s) 124, 970, 1204
HpyCH4V TGCA 9 cut(s) 74, 305, 358, 418, 455, 839, 981, 1055, 1180
HpyF10VI GCNNNNNNNGC 6 cut(s) 227, 452, 670, 845, 1016, 1253
HpyF3I CTNAG 2 cut(s) 935, 956
Hsp92II CATG 9 cut(s) 277, 422, 605, 826, 922, 964, 1081, 1141, 1261
Kzo9I GATC 6 cut(s) 5, 9, 180, 706, 812, 877
LmnI GCTCC 3 cut(s) 487, 556, 1016
Lsp1109I GCAGC 1 cut(s) 1001
LweI GCATC 3 cut(s) 230, 670, 1064
MaeI CTAG 2 cut(s) 852, 861
MaeIII GTNAC 3 cut(s) 93, 127, 863
MalI GATC 6 cut(s) 7, 11, 182, 708, 814, 879
MboI GATC 6 cut(s) 5, 9, 180, 706, 812, 877
MflI RGATCY 1 cut(s) 877
MhlI GDGCHC 2 cut(s) 639, 1249
MluCI AATT 8 cut(s) 81, 167, 313, 341, 367, 560, 585, 1062
MlyI GAGTC 2 cut(s) 150, 443
MseI TTAA 6 cut(s) 317, 588, 833, 929, 1173, 1232
MslI CAYNNNNRTG 2 cut(s) 632, 647
MspA1I CMGCKG 1 cut(s) 615
MspCI CTTAAG 2 cut(s) 928, 1172
MspI CCGG 4 cut(s) 54, 700, 1112, 1273
MspR9I CCNGG 1 cut(s) 701
MvnI CGCG 1 cut(s) 647
MwoI GCNNNNNNNGC 6 cut(s) 227, 452, 670, 845, 1016, 1253
NciI CCSGG 1 cut(s) 701
NcoI CCATGG 1 cut(s) 1257
NdeII GATC 6 cut(s) 5, 9, 180, 706, 812, 877
NlaIII CATG 9 cut(s) 277, 422, 605, 826, 922, 964, 1081, 1141, 1261
NlaIV GGNNCC 2 cut(s) 483, 1246
NmuCI GTSAC 2 cut(s) 127, 863
NspI RCATGY 3 cut(s) 826, 964, 1141
NspV TTCGAA 1 cut(s) 527
OliI CACNNNNGTG 1 cut(s) 632
PaeI GCATGC 1 cut(s) 964
PciI ACATGT 2 cut(s) 822, 1137
PfeI GAWTC 4 cut(s) 62, 624, 1129, 1165
PkrI GCNGC 1 cut(s) 991
Ple19I CGATCG 1 cut(s) 815
PleI GAGTC 2 cut(s) 150, 442
PpsI GAGTC 2 cut(s) 150, 442
PscI ACATGT 2 cut(s) 822, 1137
PspFI CCCAGC 1 cut(s) 280
PspN4I GGNNCC 2 cut(s) 483, 1246
PspPI GGNCC 1 cut(s) 1030
PstNI CAGNNNCTG 1 cut(s) 113
PsuI RGATCY 1 cut(s) 877
PvuI CGATCG 1 cut(s) 815
PvuII CAGCTG 1 cut(s) 615
RsaI GTAC 5 cut(s) 239, 333, 827, 1136, 1184
RsaNI GTAC 5 cut(s) 238, 332, 826, 1135, 1183
RseI CAYNNNNRTG 2 cut(s) 632, 647
SalI GTCGAC 1 cut(s) 153
SaqAI TTAA 6 cut(s) 317, 588, 833, 929, 1173, 1232
SatI GCNGC 1 cut(s) 990
Sau3AI GATC 6 cut(s) 5, 9, 180, 706, 812, 877
Sau96I GGNCC 1 cut(s) 1030
SchI GAGTC 2 cut(s) 150, 443
ScrFI CCNGG 1 cut(s) 701
SduI GDGCHC 2 cut(s) 639, 1249
SfaNI GCATC 3 cut(s) 230, 670, 1064
SfuI TTCGAA 1 cut(s) 527
SinI GGWCC 1 cut(s) 1030
SmiI ATTTAAAT 1 cut(s) 318
SmiMI CAYNNNNRTG 2 cut(s) 632, 647
SmlI CTYRAG 3 cut(s) 783, 928, 1172
SmoI CTYRAG 3 cut(s) 783, 928, 1172
SpeI ACTAGT 1 cut(s) 860
SphI GCATGC 1 cut(s) 964
Sse9I AATT 8 cut(s) 81, 167, 313, 341, 367, 560, 585, 1062
SsiI CCGC 2 cut(s) 645, 1227
SspMI CTAG 2 cut(s) 852, 861
StyD4I CCNGG 1 cut(s) 699
StyI CCWWGG 1 cut(s) 1257
SwaI ATTTAAAT 1 cut(s) 318
TaaI ACNGT 3 cut(s) 124, 970, 1204
TaqI TCGA 4 cut(s) 8, 154, 495, 527
TasI AATT 8 cut(s) 81, 167, 313, 341, 367, 560, 585, 1062
TatI WGTACW 2 cut(s) 237, 825
TfiI GAWTC 4 cut(s) 62, 624, 1129, 1165
Tru1I TTAA 6 cut(s) 317, 588, 833, 929, 1173, 1232
Tru9I TTAA 6 cut(s) 317, 588, 833, 929, 1173, 1232
TscAI CASTG 2 cut(s) 81, 879
TseFI GTSAC 2 cut(s) 127, 863
TseI GCWGC 1 cut(s) 989
Tsp45I GTSAC 2 cut(s) 127, 863
TspDTI ATGAA 7 cut(s) 57, 290, 718, 907, 1066, 1108, 1319
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 2 cut(s) 81, 879
Vha464I CTTAAG 2 cut(s) 928, 1172
VpaK11BI GGWCC 1 cut(s) 1030
XapI RAATTY 3 cut(s) 167, 313, 367
XceI RCATGY 3 cut(s) 826, 964, 1141
XmiI GTMKAC 1 cut(s) 154
XspI CTAG 2 cut(s) 852, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.