Rh3CG237700

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
22712295 .. 22720159
7865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG237700.1

Sequence Viewer

Length: 1752 bp
ATGAGGACAAATGGAGAGAAGGACATCTTGAATGGGATCACTGGTTCAGTAAACCCCGGCGAAGTTCTTGCCCTGATGGGACCATCAGGAAGTGGAAAGACCACACTCCTTAATCTGCTTGGAGGCAGGATAGCCAGAGGCAATGTCAGTGGTTCAATTAACTACAATGATCAGACATATTCCAAGTACCTAAAGCGCAGGATAGGATTCGTGACTCAGGATGATGTTCTATTTCCTCACCTGACAGTGAAAGAAACATTAACATATGCAGCCCTCCTACAGCTTCCAAAGACATTGACAAAAGAGCAGAAAAAAAAACGAGCAGTCGATGTCATCTATGAGCTAGGCTTAGAGAGGTGCCAAGACACTATGATTGGTGGCTCGTTTGTCCGCGGGGTTTCAGGTGGAGAGAGGAAGAGAGTTTGCATTGGCAATGAGATCATAATCAACCCTTCCCTTCTGTTTCTTGATGAACCAACCTCCGGCTTGGATTCAACAACTGCACTTAGAATTGTTCAGATGTTACAAGACATAGCAGAGGCTGGAAAAACAGTGGTGACAACAATCCACCAACCATCCAGTAGACTCTTCCACAAATTTGACAAGTTGATTCTTCTTGGGAAAGGAAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGGTTTATTTCTCATCCATAGGATGTTCTCCACTTATTGCCATGAACCCAGCAGAGTTCTTGCTAGACCTTGCAAACGGAAACATTAACGATGTTTCTGTACCATCAGAGTTGGAGGACAAAGTTCAAATGGAAAACTCAGAAGCTGATACAAGAAATGGAAAGCCATCTCCAGCAGTTGTGCATGAGTATCTTGTGGAAGCCTATGAGACACGTGTGGCTGACGAGGAGAAGAAGAAGCTTATGGCTCCTCTTCCCCTTGATGATGAACTGAAGTTGAAGATCTCTTTTGCGAAACGAGAATGGGGAGCAAGCTGGTGGGAACAATTTTCTATCTTATTCTGCAGAGGAATTAAAGAACGGAAGCATGACTATTTCAGCTGGTTGAGAATCACTCAAGTTCTTTCCACTGCAGTTATTTTGGGTTTACTATGGTGGCAGTCAGATAGCCACACTACCAAAGGACTGGAAGATCAGGCAGGGCTACTTTTCTTCATTGCTGTCTTCTGGGGATTTTTCCCTGTCTTCACAGCAATCTTCACATTTCCTCAAGAAAGAGCTATGCTGACCAAGGAACGAGCAGCTGACATGTACAGATTAAGTGCATATTTTGTGGCTAGGACTACAAGCGACCTCCCACTTGACCTATTGCTTCCTGTACTCTTCCTTGCAATCGTATATTTCATGGCAGGCTTAAGGCTCAGTACTGAAACCTTTTTCCTAAGCATGCTTATAGTTTTCCTATGCATTGTGGCAGCTCAGGGACTTGGATTAGCTATTGGAGCTACATTGATGGACTTAAAGAAGGCAACAACTCTGGCTTCAGTAACTGTGATGACATTCATGCTGGCTGGGGGGTTCTTCGTGAAAAAAGTTCCGGTGTTCATATCTTGGATCCGCTATATGTCTTTCAACTACCACACATACAAGCTTCTTCTGAAGGTGCAGTTTGACGGCATAATACCCACCGTTAATGGGTCCAGCACTGATTGTAGTTTAACAGGAGTTGGTGCTCTTGTAGCCATGGTTTTCGGATACCGATTTTTGGCATACCTCTCTTTGAGGAGAATGAAGCTTCAAGCTGGAGCGTAA

Protein Analysis

583

Amino Acids

64.81

Weight (kDa)

8.85

Isoelectric Point (pI)

28.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 10 - 161 1e-29 ABC transporter
ABC2_membrane_7 PF19055 190 - 251 1.5e-07 ABC-2 type transporter
ABC2_membrane_7 PF19055 324 - 496 6.4e-06 ABC-2 type transporter
ABC2_membrane PF01061 328 - 537 3.7e-47 ABC-2 type transporter
ABC2_membrane_3 PF12698 381 - 571 1e-05 ABC-2 family transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 357
AccI GTMKAC 1 cut(s) 583
AccII CGCG 1 cut(s) 393
AciI CCGC 3 cut(s) 391, 393, 1558
AclWI GGATC 3 cut(s) 44, 1549, 1562
AcsI RAATTY 1 cut(s) 596
AcuI CTGAAG 3 cut(s) 953, 1467, 1619
AcvI CACGTG 1 cut(s) 875
AfaI GTAC 5 cut(s) 188, 762, 1253, 1320, 1366
AfiI CCNNNNNNNGG 3 cut(s) 482, 1635, 1705
AflII CTTAAG 1 cut(s) 1354
AflIII ACRYGT 3 cut(s) 872, 874, 1248
AgsI TTSAA 7 cut(s) 31, 156, 495, 788, 940, 1573, 1739
AloI GAACNNNNNNTCC 2 cut(s) 28, 60
Alw21I GWGCWC 1 cut(s) 1675
Alw26I GTCTC 1 cut(s) 863
AlwI GGATC 3 cut(s) 44, 1549, 1562
AlwNI CAGNNNCTG 3 cut(s) 542, 806, 1490
ApeKI GCWGC 3 cut(s) 269, 1241, 1415
ApoI RAATTY 1 cut(s) 596
AspLEI GCGC 1 cut(s) 198
AspS9I GGNCC 2 cut(s) 80, 1638
AsuC2I CCSGG 1 cut(s) 57
AsuHPI GGTGA 2 cut(s) 230, 568
AvaII GGWCC 2 cut(s) 80, 1638
BamHI GGATCC 1 cut(s) 1554
BanI GGYRCC 1 cut(s) 357
BbrPI CACGTG 1 cut(s) 875
BbsI GAAGAC 2 cut(s) 1156, 1177
Bbv12I GWGCWC 1 cut(s) 1675
BbvI GCAGC 3 cut(s) 281, 1253, 1427
BccI CCATC 6 cut(s) 70, 91, 583, 772, 835, 1447
BceAI ACGGC 1 cut(s) 1630
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciVI GTATCC 1 cut(s) 1688
BclI TGATCA 1 cut(s) 169
BcnI CCSGG 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 863
BfaI CTAG 3 cut(s) 344, 725, 1278
BfmI CTRYAG 3 cut(s) 278, 1003, 1071
BfrI CTTAAG 1 cut(s) 1354
BfuI GTATCC 1 cut(s) 1688
BglII AGATCT 1 cut(s) 942
BisI GCNGC 3 cut(s) 270, 1242, 1416
BlsI GCNGC 3 cut(s) 271, 1243, 1417
BmcAI AGTACT 1 cut(s) 1366
Bme1390I CCNGG 1 cut(s) 57
Bme18I GGWCC 2 cut(s) 80, 1638
BmgT120I GGNCC 2 cut(s) 80, 1638
BmiI GGNNCC 5 cut(s) 81, 359, 909, 1556, 1639
BmrFI CCNGG 1 cut(s) 57
BmsI GCATC 1 cut(s) 659
BpiI GAAGAC 2 cut(s) 1156, 1177
BplI GAGNNNNNCTC 2 cut(s) 1039, 1071
BpmI CTGGAG 1 cut(s) 816
Bpu10I CCTNAGC 2 cut(s) 1382, 1419
BpuEI CTTGAG 2 cut(s) 1041, 1194
BpuMI CCSGG 1 cut(s) 57
BsaAI YACGTR 1 cut(s) 875
BsaBI GATNNNNATC 1 cut(s) 443
BsaJI CCNNGG 4 cut(s) 55, 391, 1230, 1683
BsaWI WCCGGW 1 cut(s) 1537
Bsc4I CCNNNNNNNGG 3 cut(s) 482, 1635, 1705
Bse1I ACTGG 3 cut(s) 46, 579, 1131
Bse3DI GCAATG 4 cut(s) 148, 439, 666, 1155
Bse8I GATNNNNATC 1 cut(s) 443
BseDI CCNNGG 4 cut(s) 55, 391, 1230, 1683
BseGI GGATG 4 cut(s) 226, 575, 674, 689
BseJI GATNNNNATC 1 cut(s) 443
BseLI CCNNNNNNNGG 3 cut(s) 482, 1635, 1705
BseMI GCAATG 4 cut(s) 148, 439, 666, 1155
BseMII CTCAG 4 cut(s) 230, 813, 1375, 1433
BseNI ACTGG 3 cut(s) 46, 579, 1131
BseRI GAGGAG 3 cut(s) 900, 902, 1738
BseXI GCAGC 3 cut(s) 281, 1253, 1427
BseYI CCCAGC 2 cut(s) 709, 1511
BsgI GTGCAG 2 cut(s) 486, 1625
Bsh1236I CGCG 1 cut(s) 393
BshNI GGYRCC 1 cut(s) 357
BsiHKAI GWGCWC 1 cut(s) 1675
BsiSI CCGG 3 cut(s) 57, 483, 1538
BslFI GGGAC 2 cut(s) 93, 1437
BslI CCNNNNNNNGG 3 cut(s) 482, 1635, 1705
BsmAI GTCTC 1 cut(s) 863
BsmFI GGGAC 2 cut(s) 93, 1437
Bsp1286I GDGCHC 1 cut(s) 1675
Bsp1407I TGTACA 1 cut(s) 1251
Bsp143I GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
Bsp19I CCATGG 1 cut(s) 1683
BspACI CCGC 3 cut(s) 391, 393, 1558
BspCNI CTCAG 4 cut(s) 229, 812, 1374, 1432
BspFNI CGCG 1 cut(s) 393
BspLI GGNNCC 5 cut(s) 81, 359, 909, 1556, 1639
BspMAI CTGCAG 2 cut(s) 1007, 1075
BspPI GGATC 3 cut(s) 44, 1549, 1562
BspT107I GGYRCC 1 cut(s) 357
BspTI CTTAAG 1 cut(s) 1354
BsrDI GCAATG 4 cut(s) 148, 439, 666, 1155
BsrGI TGTACA 1 cut(s) 1251
BsrI ACTGG 3 cut(s) 46, 579, 1131
BssECI CCNNGG 4 cut(s) 55, 391, 1230, 1683
BssMI GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
BssT1I CCWWGG 2 cut(s) 1230, 1683
Bst4CI ACNGT 4 cut(s) 247, 553, 1492, 1630
Bst6I CTCTTC 4 cut(s) 410, 593, 918, 1328
BstAFI CTTAAG 1 cut(s) 1354
BstAUI TGTACA 1 cut(s) 1251
BstBAI YACGTR 1 cut(s) 875
BstC8I GCNNGC 5 cut(s) 632, 973, 1351, 1388, 1509
BstDEI CTNAG 7 cut(s) 216, 349, 506, 799, 1361, 1382, 1419
BstDSI CCRYGG 2 cut(s) 391, 1683
BstF5I GGATG 4 cut(s) 226, 575, 674, 689
BstFNI CGCG 1 cut(s) 393
BstHHI GCGC 1 cut(s) 198
BstKTI GATC 6 cut(s) 39, 172, 441, 945, 1135, 1557
BstMAI GTCTC 1 cut(s) 863
BstMBI GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
BstMWI GCNNNNNNNGC 3 cut(s) 656, 1442, 1679
BstNSI RCATGY 2 cut(s) 1252, 1390
BstSCI CCNGG 1 cut(s) 55
BstSFI CTRYAG 3 cut(s) 278, 1003, 1071
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 3 cut(s) 281, 1253, 1427
BstV2I GAAGAC 2 cut(s) 1156, 1177
BstX2I RGATCY 2 cut(s) 942, 1554
BstXI CCANNNNNNTGG 1 cut(s) 1126
BstYI RGATCY 2 cut(s) 942, 1554
BsuI GTATCC 1 cut(s) 1688
BtgI CCRYGG 2 cut(s) 391, 1683
BtsCI GGATG 4 cut(s) 226, 575, 674, 689
BtsI GCAGTG 1 cut(s) 1068
BtsIMutI CAGTG 6 cut(s) 39, 154, 252, 558, 1068, 1644
Cac8I GCNNGC 5 cut(s) 632, 973, 1351, 1388, 1509
CaiI CAGNNNCTG 3 cut(s) 542, 806, 1490
CfoI GCGC 1 cut(s) 198
Cfr13I GGNCC 2 cut(s) 80, 1638
Cfr42I CCGCGG 1 cut(s) 394
Csp6I GTAC 5 cut(s) 187, 761, 1252, 1319, 1365
CspCI CAANNNNNGTGG 2 cut(s) 130, 165
CviAII CATG 8 cut(s) 703, 845, 1028, 1249, 1345, 1387, 1504, 1684
CviQI GTAC 5 cut(s) 187, 761, 1252, 1319, 1365
DdeI CTNAG 7 cut(s) 216, 349, 506, 799, 1361, 1382, 1419
DpnI GATC 6 cut(s) 38, 171, 440, 944, 1134, 1556
DpnII GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
Eam1104I CTCTTC 4 cut(s) 410, 593, 918, 1328
EarI CTCTTC 4 cut(s) 410, 593, 918, 1328
Eco130I CCWWGG 2 cut(s) 1230, 1683
Eco47I GGWCC 2 cut(s) 80, 1638
Eco57I CTGAAG 3 cut(s) 953, 1467, 1619
Eco72I CACGTG 1 cut(s) 875
EcoT14I CCWWGG 2 cut(s) 1230, 1683
EcoT22I ATGCAT 1 cut(s) 1409
ErhI CCWWGG 2 cut(s) 1230, 1683
FaeI CATG 8 cut(s) 706, 848, 1031, 1252, 1348, 1390, 1507, 1687
FalI AAGNNNNNCTT 2 cut(s) 11, 43
FaqI GGGAC 2 cut(s) 93, 1437
FatI CATG 8 cut(s) 702, 844, 1027, 1248, 1344, 1386, 1503, 1683
FauI CCCGC 1 cut(s) 386
FauNDI CATATG 1 cut(s) 265
FbaI TGATCA 1 cut(s) 169
FblI GTMKAC 1 cut(s) 583
Fnu4HI GCNGC 3 cut(s) 270, 1242, 1416
FokI GGATG 4 cut(s) 233, 562, 661, 696
Fsp4HI GCNGC 3 cut(s) 270, 1242, 1416
FspBI CTAG 3 cut(s) 344, 725, 1278
GlaI GCGC 1 cut(s) 197
GluI GCNGC 3 cut(s) 270, 1242, 1416
GsaI CCCAGC 2 cut(s) 713, 1515
GsuI CTGGAG 1 cut(s) 816
HapII CCGG 3 cut(s) 57, 483, 1538
HhaI GCGC 1 cut(s) 198
Hin1II CATG 8 cut(s) 706, 848, 1031, 1252, 1348, 1390, 1507, 1687
Hin6I GCGC 1 cut(s) 196
HinP1I GCGC 1 cut(s) 196
HindIII AAGCTT 4 cut(s) 628, 899, 1589, 1733
HinfI GANTC 6 cut(s) 207, 214, 491, 585, 610, 1050
HpaII CCGG 3 cut(s) 57, 483, 1538
HphI GGTGA 2 cut(s) 230, 568
Hpy166II GTNNAC 3 cut(s) 52, 584, 1088
Hpy188I TCNGA 8 cut(s) 174, 519, 655, 769, 802, 1105, 1599, 1694
Hpy188III TCNNGA 7 cut(s) 28, 87, 211, 218, 467, 1211, 1525
Hpy8I GTNNAC 3 cut(s) 52, 584, 1088
HpyAV CCTTC 5 cut(s) 13, 462, 467, 1459, 1594
HpyCH4III ACNGT 4 cut(s) 247, 553, 1492, 1630
HpyCH4IV ACGT 1 cut(s) 874
HpyF10VI GCNNNNNNNGC 3 cut(s) 656, 1442, 1679
HpyF3I CTNAG 7 cut(s) 216, 349, 506, 799, 1361, 1382, 1419
HpySE526I ACGT 1 cut(s) 874
Hsp92II CATG 8 cut(s) 706, 848, 1031, 1252, 1348, 1390, 1507, 1687
HspAI GCGC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 169
KspI CCGCGG 1 cut(s) 394
Kzo9I GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
LmnI GCTCC 4 cut(s) 913, 968, 1442, 1745
Lsp1109I GCAGC 3 cut(s) 281, 1253, 1427
LweI GCATC 1 cut(s) 659
MaeI CTAG 3 cut(s) 344, 725, 1278
MaeII ACGT 1 cut(s) 874
MaeIII GTNAC 4 cut(s) 211, 522, 556, 1486
MalI GATC 6 cut(s) 38, 171, 440, 944, 1134, 1556
MboI GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
MflI RGATCY 2 cut(s) 942, 1554
MhlI GDGCHC 1 cut(s) 1675
MluCI AATT 5 cut(s) 156, 510, 596, 986, 1011
MlyI GAGTC 2 cut(s) 208, 579
MmeI TCCRAC 1 cut(s) 753
Mph1103I ATGCAT 1 cut(s) 1409
MspA1I CMGCKG 3 cut(s) 393, 1041, 1244
MspCI CTTAAG 1 cut(s) 1354
MspI CCGG 3 cut(s) 57, 483, 1538
MspR9I CCNGG 1 cut(s) 57
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 3 cut(s) 656, 1442, 1679
NciI CCSGG 1 cut(s) 57
NcoI CCATGG 1 cut(s) 1683
NdeI CATATG 1 cut(s) 265
NdeII GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
NlaIII CATG 8 cut(s) 706, 848, 1031, 1252, 1348, 1390, 1507, 1687
NlaIV GGNNCC 5 cut(s) 81, 359, 909, 1556, 1639
NmuCI GTSAC 2 cut(s) 211, 556
NsiI ATGCAT 1 cut(s) 1409
NspI RCATGY 2 cut(s) 1252, 1390
PaeI GCATGC 1 cut(s) 1390
PciI ACATGT 1 cut(s) 1248
PfeI GAWTC 4 cut(s) 207, 491, 610, 1050
PkrI GCNGC 3 cut(s) 271, 1243, 1417
PleI GAGTC 2 cut(s) 208, 579
PmaCI CACGTG 1 cut(s) 875
PmlI CACGTG 1 cut(s) 875
PpsI GAGTC 2 cut(s) 208, 579
Ppu21I YACGTR 1 cut(s) 875
PscI ACATGT 1 cut(s) 1248
PspCI CACGTG 1 cut(s) 875
PspFI CCCAGC 2 cut(s) 709, 1511
PspN4I GGNNCC 5 cut(s) 81, 359, 909, 1556, 1639
PspPI GGNCC 2 cut(s) 80, 1638
PstI CTGCAG 2 cut(s) 1007, 1075
PstNI CAGNNNCTG 3 cut(s) 542, 806, 1490
PsuI RGATCY 2 cut(s) 942, 1554
PvuII CAGCTG 2 cut(s) 1041, 1244
RsaI GTAC 5 cut(s) 188, 762, 1253, 1320, 1366
RsaNI GTAC 5 cut(s) 187, 761, 1252, 1319, 1365
SacII CCGCGG 1 cut(s) 394
SatI GCNGC 3 cut(s) 270, 1242, 1416
Sau3AI GATC 6 cut(s) 36, 169, 438, 942, 1132, 1554
Sau96I GGNCC 2 cut(s) 80, 1638
ScaI AGTACT 1 cut(s) 1366
SchI GAGTC 2 cut(s) 208, 579
ScrFI CCNGG 1 cut(s) 57
SduI GDGCHC 1 cut(s) 1675
SfaNI GCATC 1 cut(s) 659
SfcI CTRYAG 3 cut(s) 278, 1003, 1071
Sfr303I CCGCGG 1 cut(s) 394
SgrBI CCGCGG 1 cut(s) 394
SinI GGWCC 2 cut(s) 80, 1638
SmlI CTYRAG 3 cut(s) 1056, 1209, 1354
SmoI CTYRAG 3 cut(s) 1056, 1209, 1354
SphI GCATGC 1 cut(s) 1390
Sse9I AATT 5 cut(s) 156, 510, 596, 986, 1011
SsiI CCGC 3 cut(s) 391, 393, 1558
SspMI CTAG 3 cut(s) 344, 725, 1278
StyD4I CCNGG 1 cut(s) 55
StyI CCWWGG 2 cut(s) 1230, 1683
TaaI ACNGT 4 cut(s) 247, 553, 1492, 1630
TaiI ACGT 1 cut(s) 877
TaqI TCGA 1 cut(s) 327
TasI AATT 5 cut(s) 156, 510, 596, 986, 1011
TatI WGTACW 3 cut(s) 1251, 1318, 1364
TfiI GAWTC 4 cut(s) 207, 491, 610, 1050
TscAI CASTG 6 cut(s) 46, 154, 252, 558, 1075, 1651
TseFI GTSAC 2 cut(s) 211, 556
TseI GCWGC 3 cut(s) 269, 1241, 1415
Tsp45I GTSAC 2 cut(s) 211, 556
TspDTI ATGAA 8 cut(s) 486, 719, 942, 1144, 1333, 1492, 1534, 1745
TspGWI ACGGA 2 cut(s) 753, 1036
TspRI CASTG 6 cut(s) 46, 154, 252, 558, 1075, 1651
Vha464I CTTAAG 1 cut(s) 1354
VpaK11BI GGWCC 2 cut(s) 80, 1638
XapI RAATTY 1 cut(s) 596
XceI RCATGY 2 cut(s) 1252, 1390
XmiI GTMKAC 1 cut(s) 583
XspI CTAG 3 cut(s) 344, 725, 1278
ZrmI AGTACT 1 cut(s) 1366
Zsp2I ATGCAT 1 cut(s) 1409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.