Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004514

Physical Location & Seq

Genomic Coordinates Reverse (-)

23229098 .. 23236677

Gene Structure 7580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ44270

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGATGGGAGCTTCGCCAGGGCGTGGCAGTGGCAGTGGCAGTGCCAAAGGTAGCACACACATAAGGAAGACTAGAAGTGCTCAAATGAAGTTTGAGCTGGATGAATTGAGCAGCGGCGCCGCTTTAAGCAGAGCCTCGAGCGCTAGCTTGGGGTTCTCATTCTCCTTCACCGGCTTTACTGTGCCCGCTGATGAAATTGCGGACTCAAAGCCTTTTAGCGACGATGATGAAATTCCCGAAGATCTTGAAGCCGGCAACCGAAAACCAAAGTTTCAGACCGAACCCACCATGCCGATTTATCTCAAGTTCACAGATGTGACATACAAGGTCATTCTCAAAGGAATGAGGACAAATGGAGAGAAGGACATCTTGAATGGGATCACTGGTTCAGTAAACCCCGGCGAAGTTCTTGCCCTGATGGGACCATCAGGAAGTGGAAAGACCACACTCCTTAATCTGCTTGGAGGCAGGATAGCCAGAGGCAATGTCAGTGGTTCAATTAACTACAATGATCAGACATATTCCAAGTACCTAAAGCGCAGGATAGGATTCGTGACTCAGGATGATGTTCTATTTCCTCACCTGACAGTGAAAGAAACATTAACATATGCAGCCCTCCTACAGCTGCCAAAGACATTGACAAAAGAGCAGAAAAAAAAACGAGCAGTCGACGTCATCTATGAGCTAGGCTTAGAGAGGTGCCAAGACACTATGATTGGTGGCTCGTTTGTCCGCGGGGTTTCAGGTGGAGAGAGGAAGAGAGTTTGCATTGGCAATGAGATCATAATCAATCCTTCCCTTCTGTTTCTTGATGAACCAACCTCCGGCTTGGATTCAACAACTGCACTTAGAATTGTTCAGATGTTACAAGACATAGCAGAGGCTGGAAAAACAGTGGTGACAACAATCCACCAACCATCCAGTAGACTCTTCCACAAATTTGACAAGTTGATTCTTCTTGGGAAAGGAAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGGTTTATTTCTCATCCATAGGATGTTCTCCACTTATTGCCATGAACCCAGCAGAGTTCTTGCTAGACCTTGCAAACGGAAACATTAACGATGTTTCTGTACCATCAGAGTTGGAGGACAAAGTTCAAATGGAAAACTCAGAAGCTGATACAAGAAATGGAAAGCCATCTCCAGCAGTTGTGCATGAGTATCTTGTGGAAGCCTATGAGACACGTGTGGCTGACGAGGAGAAGAAGAAGCTTATGGTTCCTCTTCCCCTTGATGATGAACTGAAGTTGAAGATCTCTTTTGCCAAACGAGAATGGGGAGCAAGCTGGTGGGAACAATTTTCTATCTTATTCTGCAGAGGAATTAAAGAACGGAAGCATGACTATTTCAGCTGGTTGAGAATCACCCAAGTTCTTTCCACTGCAGTTATTTTGGGTTTACTATGGTGGCAGTCAGATAGCCACACTACCAAAGGACTGGAAGATCAGGCAGGGCTACTTTTCTTCATTGCTGTCTTCTGGGGATTTTTCCCTGTCTTCACAGCAATCTTCACATTTCCTCAAGAAAGAGCTATGCTGACCAAGGAACGAGCAGCCGACATGTACAGATTAAGTGCATATTTTGTGGCTAGGACTACAAGCGACCTCCCACTTGACCTATTGCTTCCTGTACTCTTCCTTGCTATCGTATATTTTATGGCAGGCTTAAGGCTCAGTACTGAAACCTTTTTCCTAAGCATGCTTATAGTTTTCCTATGCATTGTGGCAGCTCAGGGACTTGGATTAGCTATTGGAGCTACATTGATGGACTTAAAGAAGGCAACAACTCTGGCTTCAGTAACTGTGATGACATTCATGCTGGCTGGGGGGTTCTTCGTGAAAAACGTTCCGGTGTTCATATCTTGGATCCGCTATATGTCTTTCAACTACCACACATACAAGCTTCTTCTGAAGGTGCAGTTTGAAGACATAATACCCACCATTAATGGGTCCAGCACTGATTGTAGTTTAACAGGAGTTGGTGCTCTTGTAGCCATGGTTTTCGGATACCGATTATTGGCATACCTTTCTTTGAGGAGAATGAAGCTTCAAGCTGGAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0010148 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042044 GO:0042221 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

697

Amino Acids

77.05

Weight (kDa)

8.45

Isoelectric Point (pI)

30.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	124 - 275	1.4e-29	ABC transporter
ABC2_membrane_7	PF19055	304 - 364	2.6e-07	ABC-2 type transporter
ABC2_membrane_7	PF19055	439 - 600	5.2e-06	ABC-2 type transporter
ABC2_membrane	PF01061	442 - 651	6.2e-47	ABC-2 type transporter
ABC2_membrane_3	PF12698	495 - 686	1.5e-06	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06530 AT5G06530 AT5G06530 AT5G06530
fragaria_vesca	FvH4_6g21010 FvH4_6g21010 FvH4_6g21010
malus_domestica	MD12G1045900.v1.1 MD14G1044500.v1.1
prunus_persica	Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1
pyrus_communis	pycom12g03940 pycom14g03770
rosa_chinensis	RchiOBHm_Chr3g0477391
rosa_laevigata	RLG00000023726
rosa_multiflora	Rmu_ssc0000341.1_g000030
rosa_roxburghii	Rroxscaffold_1G00008820 Rroxscaffold_3G00241160 Rroxscaffold_4G00299920 Rroxscaffold_6G00404230 Rroxscaffold_6G00404700
rosa_rugosa	Rorug03G0159900 Rorug03G0160000 Rorug03G0160100
rosa_samantha	Rh3AG210600 Rh3BG243800 Rh3CG237700 Rh3DG237400
rosa_wichuraiana	Rw3G019080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	675
AccB1I	GGYRCC	2 cut(s)	116, 699
AccB7I	CCANNNNNTGG	1 cut(s)	23
AccI	GTMKAC	2 cut(s)	669, 925
AccII	CGCG	1 cut(s)	735
AciI	CCGC	7 cut(s)	114, 120, 186, 200, 733, 735, 1900
AclI	AACGTT	1 cut(s)	1875
AclWI	GGATC	3 cut(s)	386, 1891, 1904
AcsI	RAATTY	2 cut(s)	231, 938
AcuI	CTGAAG	3 cut(s)	1295, 1809, 1961
AcvI	CACGTG	1 cut(s)	1217
AcyI	GRCGYC	2 cut(s)	117, 672
AfaI	GTAC	5 cut(s)	530, 1104, 1595, 1662, 1708
AfeI	AGCGCT	1 cut(s)	142
AfiI	CCNNNNNNNGG	4 cut(s)	23, 824, 1977, 2047
AflII	CTTAAG	1 cut(s)	1696
AflIII	ACRYGT	3 cut(s)	1214, 1216, 1590
AgsI	TTSAA	9 cut(s)	248, 373, 498, 837, 1130, 1282, 1915, 1955, 2081
AjnI	CCWGG	1 cut(s)	16
AleI	CACNNNNGTG	1 cut(s)	314
AloI	GAACNNNNNNTCC	2 cut(s)	370, 402
Alw21I	GWGCWC	2 cut(s)	82, 2017
Alw26I	GTCTC	1 cut(s)	1205
AlwI	GGATC	3 cut(s)	386, 1891, 1904
AlwNI	CAGNNNCTG	3 cut(s)	884, 1148, 1832
Ama87I	CYCGRG	1 cut(s)	136
Aor51HI	AGCGCT	1 cut(s)	142
ApeKI	GCWGC	5 cut(s)	111, 611, 625, 1583, 1757
ApoI	RAATTY	2 cut(s)	231, 938
AseI	ATTAAT	1 cut(s)	1974
AspLEI	GCGC	3 cut(s)	119, 143, 540
AspS9I	GGNCC	2 cut(s)	422, 1980
AsuC2I	CCSGG	1 cut(s)	399
AsuHPI	GGTGA	4 cut(s)	160, 572, 910, 1387
AsuNHI	GCTAGC	1 cut(s)	143
AvaI	CYCGRG	1 cut(s)	136
AvaII	GGWCC	2 cut(s)	422, 1980
BaeGI	GKGCMC	1 cut(s)	186
BamHI	GGATCC	1 cut(s)	1896
BanI	GGYRCC	2 cut(s)	116, 699
BarI	GAAGNNNNNNTAC	2 cut(s)	1947, 1979
BbrPI	CACGTG	1 cut(s)	1217
BbsI	GAAGAC	4 cut(s)	74, 1498, 1519, 1962
Bbv12I	GWGCWC	2 cut(s)	82, 2017
BbvI	GCAGC	5 cut(s)	123, 612, 623, 1595, 1769
BccI	CCATC	6 cut(s)	412, 433, 925, 1114, 1177, 1789
BcgI	CGANNNNNNTGC	2 cut(s)	392, 426
BciT130I	CCWGG	1 cut(s)	18
BciVI	GTATCC	1 cut(s)	2030
BclI	TGATCA	1 cut(s)	511
BcnI	CCSGG	1 cut(s)	399
BcoDI	GTCTC	1 cut(s)	1205
BfaI	CTAG	5 cut(s)	72, 144, 686, 1067, 1620
BfmI	CTRYAG	3 cut(s)	620, 1345, 1413
BfoI	RGCGCY	2 cut(s)	120, 144
BfrI	CTTAAG	1 cut(s)	1696
BfuI	GTATCC	1 cut(s)	2030
BglII	AGATCT	2 cut(s)	241, 1284
BisI	GCNGC	7 cut(s)	112, 115, 120, 612, 626, 1584, 1758
BlsI	GCNGC	7 cut(s)	113, 116, 121, 613, 627, 1585, 1759
BmcAI	AGTACT	1 cut(s)	1708
Bme1390I	CCNGG	2 cut(s)	18, 399
Bme18I	GGWCC	2 cut(s)	422, 1980
BmeT110I	CYCGRG	1 cut(s)	136
BmgT120I	GGNCC	2 cut(s)	422, 1980
BmiI	GGNNCC	6 cut(s)	118, 423, 701, 1251, 1898, 1981
BmrFI	CCNGG	2 cut(s)	18, 399
BmsI	GCATC	1 cut(s)	1001
BmtI	GCTAGC	1 cut(s)	147
BpiI	GAAGAC	4 cut(s)	74, 1498, 1519, 1962
BpmI	CTGGAG	1 cut(s)	1158
Bpu10I	CCTNAGC	2 cut(s)	1724, 1761
BpuEI	CTTGAG	2 cut(s)	287, 1536
BpuMI	CCSGG	1 cut(s)	399
BsaAI	YACGTR	1 cut(s)	1217
BsaBI	GATNNNNATC	1 cut(s)	785
BsaHI	GRCGYC	2 cut(s)	117, 672
BsaJI	CCNNGG	5 cut(s)	17, 397, 733, 1572, 2025
BsaWI	WCCGGW	1 cut(s)	1879
Bsc4I	CCNNNNNNNGG	4 cut(s)	23, 824, 1977, 2047
Bse118I	RCCGGY	2 cut(s)	170, 251
Bse1I	ACTGG	3 cut(s)	388, 921, 1473
Bse3DI	GCAATG	4 cut(s)	490, 781, 1008, 1497
Bse8I	GATNNNNATC	1 cut(s)	785
BseBI	CCWGG	1 cut(s)	18
BseDI	CCNNGG	5 cut(s)	17, 397, 733, 1572, 2025
BseGI	GGATG	5 cut(s)	106, 568, 917, 1016, 1031
BseJI	GATNNNNATC	1 cut(s)	785
BseLI	CCNNNNNNNGG	4 cut(s)	23, 824, 1977, 2047
BseMI	GCAATG	4 cut(s)	490, 781, 1008, 1497
BseMII	CTCAG	4 cut(s)	572, 1155, 1717, 1775
BseNI	ACTGG	3 cut(s)	388, 921, 1473
BseRI	GAGGAG	2 cut(s)	1244, 2080
BseSI	GKGCMC	1 cut(s)	186
BseXI	GCAGC	5 cut(s)	123, 612, 623, 1595, 1769
BseYI	CCCAGC	2 cut(s)	1051, 1853
BsgI	GTGCAG	2 cut(s)	828, 1967
Bsh1236I	CGCG	1 cut(s)	735
BshNI	GGYRCC	2 cut(s)	116, 699
BsiHKAI	GWGCWC	2 cut(s)	82, 2017
BsiHKCI	CYCGRG	1 cut(s)	136
BsiSI	CCGG	5 cut(s)	171, 252, 399, 825, 1880
BslFI	GGGAC	2 cut(s)	435, 1779
BslI	CCNNNNNNNGG	4 cut(s)	23, 824, 1977, 2047
BsmAI	GTCTC	1 cut(s)	1205
BsmFI	GGGAC	2 cut(s)	435, 1779
BsoBI	CYCGRG	1 cut(s)	136
Bsp1286I	GDGCHC	3 cut(s)	82, 186, 2017
Bsp1407I	TGTACA	1 cut(s)	1593
Bsp143I	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
Bsp19I	CCATGG	1 cut(s)	2025
BspACI	CCGC	7 cut(s)	114, 120, 186, 200, 733, 735, 1900
BspCNI	CTCAG	4 cut(s)	571, 1154, 1716, 1774
BspFNI	CGCG	1 cut(s)	735
BspLI	GGNNCC	6 cut(s)	118, 423, 701, 1251, 1898, 1981
BspMAI	CTGCAG	2 cut(s)	1349, 1417
BspOI	GCTAGC	1 cut(s)	147
BspPI	GGATC	3 cut(s)	386, 1891, 1904
BspT107I	GGYRCC	2 cut(s)	116, 699
BspTI	CTTAAG	1 cut(s)	1696
BsrDI	GCAATG	4 cut(s)	490, 781, 1008, 1497
BsrFI	RCCGGY	2 cut(s)	170, 251
BsrGI	TGTACA	1 cut(s)	1593
BsrI	ACTGG	3 cut(s)	388, 921, 1473
BssAI	RCCGGY	2 cut(s)	170, 251
BssECI	CCNNGG	5 cut(s)	17, 397, 733, 1572, 2025
BssMI	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
BssNI	GRCGYC	2 cut(s)	117, 672
BssT1I	CCWWGG	2 cut(s)	1572, 2025
Bst2UI	CCWGG	1 cut(s)	18
Bst4CI	ACNGT	4 cut(s)	181, 589, 895, 1834
Bst6I	CTCTTC	4 cut(s)	752, 935, 1260, 1670
BstACI	GRCGYC	2 cut(s)	117, 672
BstAFI	CTTAAG	1 cut(s)	1696
BstAUI	TGTACA	1 cut(s)	1593
BstBAI	YACGTR	1 cut(s)	1217
BstC8I	GCNNGC	8 cut(s)	145, 186, 253, 974, 1315, 1693, 1730, 1851
BstDEI	CTNAG	7 cut(s)	558, 691, 848, 1141, 1703, 1724, 1761
BstDSI	CCRYGG	2 cut(s)	733, 2025
BstF5I	GGATG	5 cut(s)	106, 568, 917, 1016, 1031
BstFNI	CGCG	1 cut(s)	735
BstH2I	RGCGCY	2 cut(s)	120, 144
BstHHI	GCGC	3 cut(s)	119, 143, 540
BstKTI	GATC	7 cut(s)	244, 381, 514, 783, 1287, 1477, 1899
BstMAI	GTCTC	1 cut(s)	1205
BstMBI	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
BstMWI	GCNNNNNNNGC	4 cut(s)	140, 998, 1784, 2021
BstNI	CCWGG	1 cut(s)	18
BstNSI	RCATGY	2 cut(s)	1594, 1732
BstSCI	CCNGG	2 cut(s)	16, 397
BstSFI	CTRYAG	3 cut(s)	620, 1345, 1413
BstSLI	GKGCMC	1 cut(s)	186
BstUI	CGCG	1 cut(s)	735
BstV1I	GCAGC	5 cut(s)	123, 612, 623, 1595, 1769
BstV2I	GAAGAC	4 cut(s)	74, 1498, 1519, 1962
BstX2I	RGATCY	3 cut(s)	241, 1284, 1896
BstXI	CCANNNNNNTGG	1 cut(s)	1468
BstYI	RGATCY	3 cut(s)	241, 1284, 1896
BsuI	GTATCC	1 cut(s)	2030
BtgI	CCRYGG	2 cut(s)	733, 2025
BtsCI	GGATG	5 cut(s)	106, 568, 917, 1016, 1031
BtsI	GCAGTG	4 cut(s)	34, 40, 46, 1410
BtsIMutI	CAGTG	9 cut(s)	34, 40, 46, 381, 496, 594, 900, 1410, 1986
Cac8I	GCNNGC	8 cut(s)	145, 186, 253, 974, 1315, 1693, 1730, 1851
CaiI	CAGNNNCTG	3 cut(s)	884, 1148, 1832
CfoI	GCGC	3 cut(s)	119, 143, 540
Cfr10I	RCCGGY	2 cut(s)	170, 251
Cfr13I	GGNCC	2 cut(s)	422, 1980
Cfr42I	CCGCGG	1 cut(s)	736
Csp6I	GTAC	5 cut(s)	529, 1103, 1594, 1661, 1707
CspCI	CAANNNNNGTGG	2 cut(s)	472, 507
CviAII	CATG	8 cut(s)	289, 1045, 1187, 1370, 1591, 1729, 1846, 2026
CviQI	GTAC	5 cut(s)	529, 1103, 1594, 1661, 1707
DdeI	CTNAG	7 cut(s)	558, 691, 848, 1141, 1703, 1724, 1761
DinI	GGCGCC	1 cut(s)	118
DpnI	GATC	7 cut(s)	243, 380, 513, 782, 1286, 1476, 1898
DpnII	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
Eam1104I	CTCTTC	4 cut(s)	752, 935, 1260, 1670
EarI	CTCTTC	4 cut(s)	752, 935, 1260, 1670
Eco130I	CCWWGG	2 cut(s)	1572, 2025
Eco47I	GGWCC	2 cut(s)	422, 1980
Eco47III	AGCGCT	1 cut(s)	142
Eco57I	CTGAAG	3 cut(s)	1295, 1809, 1961
Eco72I	CACGTG	1 cut(s)	1217
Eco88I	CYCGRG	1 cut(s)	136
EcoRII	CCWGG	1 cut(s)	16
EcoT14I	CCWWGG	2 cut(s)	1572, 2025
EcoT22I	ATGCAT	1 cut(s)	1751
EgeI	GGCGCC	1 cut(s)	118
EheI	GGCGCC	1 cut(s)	118
ErhI	CCWWGG	2 cut(s)	1572, 2025
FaeI	CATG	8 cut(s)	292, 1048, 1190, 1373, 1594, 1732, 1849, 2029
FalI	AAGNNNNNCTT	2 cut(s)	353, 385
FaqI	GGGAC	2 cut(s)	435, 1779
FatI	CATG	8 cut(s)	288, 1044, 1186, 1369, 1590, 1728, 1845, 2025
FauI	CCCGC	2 cut(s)	193, 728
FauNDI	CATATG	1 cut(s)	607
FbaI	TGATCA	1 cut(s)	511
FblI	GTMKAC	2 cut(s)	669, 925
Fnu4HI	GCNGC	7 cut(s)	112, 115, 120, 612, 626, 1584, 1758
FokI	GGATG	5 cut(s)	113, 575, 904, 1003, 1038
Fsp4HI	GCNGC	7 cut(s)	112, 115, 120, 612, 626, 1584, 1758
FspBI	CTAG	5 cut(s)	72, 144, 686, 1067, 1620
GlaI	GCGC	3 cut(s)	118, 142, 539
GluI	GCNGC	7 cut(s)	112, 115, 120, 612, 626, 1584, 1758
GsaI	CCCAGC	2 cut(s)	1055, 1857
GsuI	CTGGAG	1 cut(s)	1158
HaeII	RGCGCY	2 cut(s)	120, 144
HapII	CCGG	5 cut(s)	171, 252, 399, 825, 1880
HhaI	GCGC	3 cut(s)	119, 143, 540
Hin1I	GRCGYC	2 cut(s)	117, 672
Hin1II	CATG	8 cut(s)	292, 1048, 1190, 1373, 1594, 1732, 1849, 2029
Hin6I	GCGC	3 cut(s)	117, 141, 538
HinP1I	GCGC	3 cut(s)	117, 141, 538
HincII	GTYRAC	1 cut(s)	670
HindII	GTYRAC	1 cut(s)	670
HindIII	AAGCTT	4 cut(s)	970, 1241, 1931, 2075
HinfI	GANTC	7 cut(s)	203, 549, 556, 833, 927, 952, 1392
HpaII	CCGG	5 cut(s)	171, 252, 399, 825, 1880
HphI	GGTGA	4 cut(s)	160, 572, 910, 1387
Hpy166II	GTNNAC	5 cut(s)	309, 394, 670, 926, 1430
Hpy188I	TCNGA	9 cut(s)	276, 516, 861, 997, 1111, 1144, 1447, 1941, 2036
Hpy188III	TCNNGA	9 cut(s)	236, 245, 370, 429, 553, 560, 809, 1553, 1867
Hpy8I	GTNNAC	5 cut(s)	309, 394, 670, 926, 1430
Hpy99I	CGWCG	2 cut(s)	224, 674
HpyAV	CCTTC	6 cut(s)	175, 355, 804, 809, 1801, 1936
HpyCH4III	ACNGT	4 cut(s)	181, 589, 895, 1834
HpyCH4IV	ACGT	3 cut(s)	672, 1216, 1875
HpyF10VI	GCNNNNNNNGC	4 cut(s)	140, 998, 1784, 2021
HpyF3I	CTNAG	7 cut(s)	558, 691, 848, 1141, 1703, 1724, 1761
HpySE526I	ACGT	3 cut(s)	672, 1216, 1875
Hsp92I	GRCGYC	2 cut(s)	117, 672
Hsp92II	CATG	8 cut(s)	292, 1048, 1190, 1373, 1594, 1732, 1849, 2029
HspAI	GCGC	3 cut(s)	117, 141, 538
KasI	GGCGCC	1 cut(s)	116
KroI	GCCGGC	1 cut(s)	251
KroNI	GCCGGC	1 cut(s)	253
Ksp22I	TGATCA	1 cut(s)	511
KspI	CCGCGG	1 cut(s)	736
Kzo9I	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
LmnI	GCTCC	4 cut(s)	8, 1310, 1784, 2087
Lsp1109I	GCAGC	5 cut(s)	123, 612, 623, 1595, 1769
LweI	GCATC	1 cut(s)	1001
MaeI	CTAG	5 cut(s)	72, 144, 686, 1067, 1620
MaeII	ACGT	3 cut(s)	672, 1216, 1875
MaeIII	GTNAC	5 cut(s)	316, 553, 864, 898, 1828
MalI	GATC	7 cut(s)	243, 380, 513, 782, 1286, 1476, 1898
MboI	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
MflI	RGATCY	3 cut(s)	241, 1284, 1896
MhlI	GDGCHC	3 cut(s)	82, 186, 2017
MluCI	AATT	8 cut(s)	104, 195, 231, 498, 852, 938, 1328, 1353
Mly113I	GGCGCC	1 cut(s)	117
MlyI	GAGTC	3 cut(s)	197, 550, 921
MmeI	TCCRAC	1 cut(s)	1095
Mph1103I	ATGCAT	1 cut(s)	1751
MroNI	GCCGGC	1 cut(s)	251
MslI	CAYNNNNRTG	1 cut(s)	314
MspA1I	CMGCKG	5 cut(s)	114, 188, 625, 735, 1383
MspCI	CTTAAG	1 cut(s)	1696
MspI	CCGG	5 cut(s)	171, 252, 399, 825, 1880
MspR9I	CCNGG	2 cut(s)	18, 399
MvaI	CCWGG	1 cut(s)	18
MvnI	CGCG	1 cut(s)	735
MwoI	GCNNNNNNNGC	4 cut(s)	140, 998, 1784, 2021
NaeI	GCCGGC	1 cut(s)	253
NarI	GGCGCC	1 cut(s)	117
NciI	CCSGG	1 cut(s)	399
NcoI	CCATGG	1 cut(s)	2025
NdeI	CATATG	1 cut(s)	607
NdeII	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
NgoMIV	GCCGGC	1 cut(s)	251
NheI	GCTAGC	1 cut(s)	143
NlaIII	CATG	8 cut(s)	292, 1048, 1190, 1373, 1594, 1732, 1849, 2029
NlaIV	GGNNCC	6 cut(s)	118, 423, 701, 1251, 1898, 1981
NmuCI	GTSAC	3 cut(s)	316, 553, 898
NsiI	ATGCAT	1 cut(s)	1751
NspI	RCATGY	2 cut(s)	1594, 1732
OliI	CACNNNNGTG	1 cut(s)	314
PaeI	GCATGC	1 cut(s)	1732
PaeR7I	CTCGAG	1 cut(s)	136
PciI	ACATGT	1 cut(s)	1590
PcsI	WCGNNNNNNNCGW	1 cut(s)	1872
PdiI	GCCGGC	1 cut(s)	253
PfeI	GAWTC	4 cut(s)	549, 833, 952, 1392
PflMI	CCANNNNNTGG	1 cut(s)	23
PkrI	GCNGC	7 cut(s)	113, 116, 121, 613, 627, 1585, 1759
PleI	GAGTC	3 cut(s)	197, 550, 921
PluTI	GGCGCC	1 cut(s)	120
PmaCI	CACGTG	1 cut(s)	1217
PmlI	CACGTG	1 cut(s)	1217
PpsI	GAGTC	3 cut(s)	197, 550, 921
Ppu21I	YACGTR	1 cut(s)	1217
PscI	ACATGT	1 cut(s)	1590
PshBI	ATTAAT	1 cut(s)	1974
Psp1406I	AACGTT	1 cut(s)	1875
Psp6I	CCWGG	1 cut(s)	16
PspCI	CACGTG	1 cut(s)	1217
PspFI	CCCAGC	2 cut(s)	1051, 1853
PspGI	CCWGG	1 cut(s)	16
PspN4I	GGNNCC	6 cut(s)	118, 423, 701, 1251, 1898, 1981
PspPI	GGNCC	2 cut(s)	422, 1980
PspXI	VCTCGAGB	1 cut(s)	136
PstI	CTGCAG	2 cut(s)	1349, 1417
PstNI	CAGNNNCTG	3 cut(s)	884, 1148, 1832
PsuI	RGATCY	3 cut(s)	241, 1284, 1896
PvuII	CAGCTG	2 cut(s)	625, 1383
RsaI	GTAC	5 cut(s)	530, 1104, 1595, 1662, 1708
RsaNI	GTAC	5 cut(s)	529, 1103, 1594, 1661, 1707
RseI	CAYNNNNRTG	1 cut(s)	314
SacII	CCGCGG	1 cut(s)	736
SalI	GTCGAC	1 cut(s)	668
SatI	GCNGC	7 cut(s)	112, 115, 120, 612, 626, 1584, 1758
Sau3AI	GATC	7 cut(s)	241, 378, 511, 780, 1284, 1474, 1896
Sau96I	GGNCC	2 cut(s)	422, 1980
ScaI	AGTACT	1 cut(s)	1708
SchI	GAGTC	3 cut(s)	197, 550, 921
ScrFI	CCNGG	2 cut(s)	18, 399
SduI	GDGCHC	3 cut(s)	82, 186, 2017
SfaNI	GCATC	1 cut(s)	1001
SfcI	CTRYAG	3 cut(s)	620, 1345, 1413
SfoI	GGCGCC	1 cut(s)	118
Sfr274I	CTCGAG	1 cut(s)	136
Sfr303I	CCGCGG	1 cut(s)	736
SgrBI	CCGCGG	1 cut(s)	736
SinI	GGWCC	2 cut(s)	422, 1980
SlaI	CTCGAG	1 cut(s)	136
SmiMI	CAYNNNNRTG	1 cut(s)	314
SmlI	CTYRAG	4 cut(s)	136, 302, 1551, 1696
SmoI	CTYRAG	4 cut(s)	136, 302, 1551, 1696
SphI	GCATGC	1 cut(s)	1732
Sse9I	AATT	8 cut(s)	104, 195, 231, 498, 852, 938, 1328, 1353
SsiI	CCGC	7 cut(s)	114, 120, 186, 200, 733, 735, 1900
SspDI	GGCGCC	1 cut(s)	116
SspMI	CTAG	5 cut(s)	72, 144, 686, 1067, 1620
StyD4I	CCNGG	2 cut(s)	16, 397
StyI	CCWWGG	2 cut(s)	1572, 2025
TaaI	ACNGT	4 cut(s)	181, 589, 895, 1834
TaiI	ACGT	3 cut(s)	675, 1219, 1878
TaqI	TCGA	2 cut(s)	137, 669
TaqII	GACCGA	1 cut(s)	293
TasI	AATT	8 cut(s)	104, 195, 231, 498, 852, 938, 1328, 1353
TatI	WGTACW	3 cut(s)	1593, 1660, 1706
TauI	GCSGC	2 cut(s)	117, 122
TfiI	GAWTC	4 cut(s)	549, 833, 952, 1392
TscAI	CASTG	9 cut(s)	34, 40, 46, 388, 496, 594, 900, 1417, 1993
TseFI	GTSAC	3 cut(s)	316, 553, 898
TseI	GCWGC	5 cut(s)	111, 611, 625, 1583, 1757
Tsp45I	GTSAC	3 cut(s)	316, 553, 898
TspGWI	ACGGA	2 cut(s)	1095, 1378
TspRI	CASTG	9 cut(s)	34, 40, 46, 388, 496, 594, 900, 1417, 1993
Van91I	CCANNNNNTGG	1 cut(s)	23
Vha464I	CTTAAG	1 cut(s)	1696
VpaK11BI	GGWCC	2 cut(s)	422, 1980
VspI	ATTAAT	1 cut(s)	1974
XapI	RAATTY	2 cut(s)	231, 938
XceI	RCATGY	2 cut(s)	1594, 1732
XhoI	CTCGAG	1 cut(s)	136
XmiI	GTMKAC	2 cut(s)	669, 925
XspI	CTAG	5 cut(s)	72, 144, 686, 1067, 1620
ZraI	GACGTC	1 cut(s)	673
ZrmI	AGTACT	1 cut(s)	1708
Zsp2I	ATGCAT	1 cut(s)	1751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.