Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0004514

Physical Location & Seq

Genomic Coordinates Forward (+)

26727395 .. 26734588

Gene Structure 7194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00404230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGAAAAACTAAATTCATCTGGGTTGGCAAGAACCAAGTCCGATCAACTGGTGGAGTCTGTGGCAGCTGCCTTCAAGTCACCGACGTCAAGTGAAGCCGCTGCTGTGGCGGCAGAGGGCAGCAGCGGAACCCTCTCAAGGAAGTCAAGCAGGCGCATAATGGGAGCTTCGCCAGGGCGTGGCAGTGGCAGTGGCAGTGCCAAGGGTAGCACACACATAAGGAAGACTAGGAGTGCTCAAATGAAGTTTGAGCTGGATGAATTGAGCAGCGGCGCCGCTTTAAGCAGAGCCTCGAGCGCTAGCTTGGGGTTCTCATTCTCCTTCACCGGCTTTACTGTGCCCGCTGATGAAATTGCGGACTCAAAGCCTTTCAGCGACGATGATGAAATTCCCGAAGATCTTGAAGCCGGCAACCGAAAACCAAAGTTTCAGACCGAACCCACCCTGCCGATTTATCTCAAGTTCACAGATGTGACATACAAGGTCATTCTCAAAAGAATGAGGACAAATGAAGAGAAGGACATCTTGAATGGGATCACTGGTTCAGTAAACCCCGGCGAAGTTCTTGCCCTGATGGGACCATCAGGAAGCGGAAAGACCACACTTCTTAATCTGCTTGGAGGCAGGATAGCCAGAGGCAATGTCAGTGGTTCAATTAACTACAATGATCAGACATATTCCAAGTACCTAAAGAGCAGGATAGGATTCGTGACTCAGGATGATGTTCTATTTCCTCACCTGACAGTGAAAGAAACATTAACATATGCAGCCCTCCTACAGCTGCCAAAGACATTGACAAAAGAGCAGAAAAAAAAACGAGCAGTCGATGTCATCTATGAGCTAGGCTTAGAGAGGTGCCAAGACACTATGATTGGTGGCTCGTTTGTCCGCGGGGTTTCAGGTGGAGAGAGGAAGAGAGTTTGCATTGGCAGTGAGATCATAATCAACCCTTCCCTTCTGTTTCTTGATGAACCAACCTCCGGCTTGGATTCAACAACTGCACTTAGAATTGTTCAGATGTTACAAGACATAGCAGAGGCTGGAAAAACAGTGGTGACAACAATCCACCAACCATCCAGTAGACTCTTCCACAAATTTGACAAGTTGATTCTTCTTGGGAAAGGAAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGGTTTATTTCTCATCCATAGGATGTTCTCCACTTATTGCCATGAACCCAGCAGAGTTCTTGCTAGACCTTGCAAATGGAAACATTAACGATGTTTCTGTACCATCAGAGTTGGAGGACAAAGTTCAAATGGAAAACTCAGAAGCTGATACAAGAAATGGAAAGCCATCTCCAGCAGTTGTGCATGAGTATCTTGTGGAAGCCTATGAGACACGTGTGGCTGACGAGGAGAAGAAGAAGCTTATGGTTCCTCTTCCCCTTGATGATGAACTGAAGTTGAAGATCTTTTCTTCAAAACGAGAATGGGGAGCAAGCTGGTGGGAACAATTTTCTATCTTATTCTGCAGAGGAATTAAAGAACGGAAGCATGACTATTTCAGCTGGTTGAGAATCACCCAAGTTCTTTCTACTGCAGTTATTTTGGGTTTACTATGGTGGCAGTCAGATAGCCACACTACCAAAGGACTGGAAGATCAGGCAGGGCTACTTTTCTTCATTGCTGTCTTCTGGGGATTTTTCCCTGTCTTCACAGCAATCTTCACATTTCCCCAAGAAAGAGCTATGCTGACCAAGGAACGAGCAGCTGACATGTACAGATTAAGTGCATATTTTGTGGCTAGGACTACAAGCGACCTCCCACTTGACCTATTGCTTCCTGTACTCTTCCTTGCAATCCTCAGTTTAACAGGAGTCGGTGCTCTTGTAGCCATGGTTTTCGGATACCGATTATTGGCATACCTTTCTTTGAGGAGAATGAAGCTTCAAGCTGGAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0010148 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042044 GO:0042221 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

644

Amino Acids

70.75

Weight (kDa)

8.55

Isoelectric Point (pI)

34.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	176 - 327	3.3e-29	ABC transporter
ABC2_membrane_7	PF19055	356 - 417	1.9e-07	ABC-2 type transporter
ABC2_membrane	PF01061	494 - 619	1.2e-23	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06530 AT5G06530 AT5G06530 AT5G06530
fragaria_vesca	FvH4_6g21010 FvH4_6g21010 FvH4_6g21010
malus_domestica	MD12G1045900.v1.1 MD14G1044500.v1.1
prunus_persica	Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1
pyrus_communis	pycom12g03940 pycom14g03770
rosa_chinensis	RchiOBHm_Chr3g0477391
rosa_laevigata	RLG00000023726
rosa_multiflora	Rmu_ssc0000341.1_g000030
rosa_roxburghii	Rroxscaffold_1G00008820 Rroxscaffold_3G00241160 Rroxscaffold_4G00299920 Rroxscaffold_6G00404230 Rroxscaffold_6G00404700
rosa_rugosa	Rorug03G0159900 Rorug03G0160000 Rorug03G0160100
rosa_samantha	Rh3AG210600 Rh3BG243800 Rh3CG237700 Rh3DG237400
rosa_wichuraiana	Rw3G019080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	89
AccB1I	GGYRCC	2 cut(s)	272, 855
AccB7I	CCANNNNNTGG	1 cut(s)	179
AccI	GTMKAC	1 cut(s)	1081
AccII	CGCG	1 cut(s)	891
AclWI	GGATC	1 cut(s)	542
AcsI	RAATTY	3 cut(s)	13, 387, 1094
AcuI	CTGAAG	1 cut(s)	1451
AcvI	CACGTG	1 cut(s)	1373
AcyI	GRCGYC	2 cut(s)	86, 273
AfaI	GTAC	4 cut(s)	686, 1260, 1751, 1818
AfeI	AGCGCT	1 cut(s)	298
AfiI	CCNNNNNNNGG	4 cut(s)	138, 179, 980, 1888
AflIII	ACRYGT	3 cut(s)	1370, 1372, 1746
AgsI	TTSAA	9 cut(s)	76, 404, 529, 654, 993, 1286, 1438, 1452, 1922
AjnI	CCWGG	1 cut(s)	172
AleI	CACNNNNGTG	1 cut(s)	470
AloI	GAACNNNNNNTCC	2 cut(s)	526, 558
Alw21I	GWGCWC	2 cut(s)	238, 1858
Alw26I	GTCTC	1 cut(s)	1361
AlwI	GGATC	1 cut(s)	542
AlwNI	CAGNNNCTG	2 cut(s)	1040, 1304
Ama87I	CYCGRG	1 cut(s)	292
Aor51HI	AGCGCT	1 cut(s)	298
ApeKI	GCWGC	9 cut(s)	65, 68, 101, 120, 123, 267, 767, 781, 1739
ApoI	RAATTY	3 cut(s)	13, 387, 1094
AspLEI	GCGC	3 cut(s)	156, 275, 299
AspS9I	GGNCC	1 cut(s)	578
AsuC2I	CCSGG	1 cut(s)	555
AsuHPI	GGTGA	5 cut(s)	72, 316, 728, 1066, 1543
AsuNHI	GCTAGC	1 cut(s)	299
AvaI	CYCGRG	1 cut(s)	292
AvaII	GGWCC	1 cut(s)	578
BaeGI	GKGCMC	1 cut(s)	342
BanI	GGYRCC	2 cut(s)	272, 855
BbrPI	CACGTG	1 cut(s)	1373
BbsI	GAAGAC	3 cut(s)	230, 1654, 1675
Bbv12I	GWGCWC	2 cut(s)	238, 1858
BbvI	GCAGC	9 cut(s)	55, 77, 88, 132, 135, 279, 768, 779, 1751
BccI	CCATC	5 cut(s)	568, 589, 1081, 1270, 1333
BcgI	CGANNNNNNTGC	2 cut(s)	548, 582
BciT130I	CCWGG	1 cut(s)	174
BciVI	GTATCC	1 cut(s)	1871
BclI	TGATCA	1 cut(s)	667
BcnI	CCSGG	1 cut(s)	555
BcoDI	GTCTC	1 cut(s)	1361
BfaI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
BfmI	CTRYAG	3 cut(s)	776, 1501, 1569
BfoI	RGCGCY	2 cut(s)	276, 300
BfuI	GTATCC	1 cut(s)	1871
BglII	AGATCT	2 cut(s)	397, 1440
Bme1390I	CCNGG	2 cut(s)	174, 555
Bme18I	GGWCC	1 cut(s)	578
BmeT110I	CYCGRG	1 cut(s)	292
BmgT120I	GGNCC	1 cut(s)	578
BmiI	GGNNCC	5 cut(s)	130, 274, 579, 857, 1407
BmrFI	CCNGG	2 cut(s)	174, 555
BmsI	GCATC	1 cut(s)	1157
BmtI	GCTAGC	1 cut(s)	303
BpiI	GAAGAC	3 cut(s)	230, 1654, 1675
BpmI	CTGGAG	1 cut(s)	1314
BpuEI	CTTGAG	2 cut(s)	121, 443
BpuMI	CCSGG	1 cut(s)	555
BsaAI	YACGTR	1 cut(s)	1373
BsaBI	GATNNNNATC	1 cut(s)	941
BsaHI	GRCGYC	2 cut(s)	86, 273
BsaJI	CCNNGG	6 cut(s)	173, 201, 553, 889, 1728, 1866
Bsc4I	CCNNNNNNNGG	4 cut(s)	138, 179, 980, 1888
Bse118I	RCCGGY	2 cut(s)	326, 407
Bse1I	ACTGG	4 cut(s)	54, 544, 1077, 1629
Bse3DI	GCAATG	3 cut(s)	646, 1164, 1653
Bse8I	GATNNNNATC	1 cut(s)	941
BseBI	CCWGG	1 cut(s)	174
BseDI	CCNNGG	6 cut(s)	173, 201, 553, 889, 1728, 1866
BseGI	GGATG	5 cut(s)	262, 724, 1073, 1172, 1187
BseJI	GATNNNNATC	1 cut(s)	941
BseLI	CCNNNNNNNGG	4 cut(s)	138, 179, 980, 1888
BseMI	GCAATG	3 cut(s)	646, 1164, 1653
BseMII	CTCAG	3 cut(s)	728, 1311, 1849
BseNI	ACTGG	4 cut(s)	54, 544, 1077, 1629
BseRI	GAGGAG	2 cut(s)	1400, 1921
BseSI	GKGCMC	1 cut(s)	342
BseXI	GCAGC	9 cut(s)	55, 77, 88, 132, 135, 279, 768, 779, 1751
BseYI	CCCAGC	1 cut(s)	1207
BsgI	GTGCAG	1 cut(s)	984
Bsh1236I	CGCG	1 cut(s)	891
BshNI	GGYRCC	2 cut(s)	272, 855
BsiHKAI	GWGCWC	2 cut(s)	238, 1858
BsiHKCI	CYCGRG	1 cut(s)	292
BsiSI	CCGG	4 cut(s)	327, 408, 555, 981
BslFI	GGGAC	1 cut(s)	591
BslI	CCNNNNNNNGG	4 cut(s)	138, 179, 980, 1888
BsmAI	GTCTC	1 cut(s)	1361
BsmFI	GGGAC	1 cut(s)	591
BsoBI	CYCGRG	1 cut(s)	292
Bsp1286I	GDGCHC	3 cut(s)	238, 342, 1858
Bsp1407I	TGTACA	1 cut(s)	1749
Bsp143I	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
Bsp19I	CCATGG	1 cut(s)	1866
BspCNI	CTCAG	3 cut(s)	727, 1310, 1848
BspFNI	CGCG	1 cut(s)	891
BspLI	GGNNCC	5 cut(s)	130, 274, 579, 857, 1407
BspMAI	CTGCAG	2 cut(s)	1505, 1573
BspOI	GCTAGC	1 cut(s)	303
BspPI	GGATC	1 cut(s)	542
BspT107I	GGYRCC	2 cut(s)	272, 855
BsrDI	GCAATG	3 cut(s)	646, 1164, 1653
BsrFI	RCCGGY	2 cut(s)	326, 407
BsrGI	TGTACA	1 cut(s)	1749
BsrI	ACTGG	4 cut(s)	54, 544, 1077, 1629
BssAI	RCCGGY	2 cut(s)	326, 407
BssECI	CCNNGG	6 cut(s)	173, 201, 553, 889, 1728, 1866
BssMI	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
BssNI	GRCGYC	2 cut(s)	86, 273
BssT1I	CCWWGG	3 cut(s)	201, 1728, 1866
Bst2UI	CCWGG	1 cut(s)	174
Bst4CI	ACNGT	3 cut(s)	337, 745, 1051
Bst6I	CTCTTC	5 cut(s)	507, 908, 1091, 1416, 1826
BstACI	GRCGYC	2 cut(s)	86, 273
BstAUI	TGTACA	1 cut(s)	1749
BstBAI	YACGTR	1 cut(s)	1373
BstC8I	GCNNGC	6 cut(s)	152, 301, 342, 409, 1130, 1471
BstDEI	CTNAG	5 cut(s)	714, 847, 1004, 1297, 1835
BstDSI	CCRYGG	2 cut(s)	889, 1866
BstF5I	GGATG	5 cut(s)	262, 724, 1073, 1172, 1187
BstFNI	CGCG	1 cut(s)	891
BstH2I	RGCGCY	2 cut(s)	276, 300
BstHHI	GCGC	3 cut(s)	156, 275, 299
BstKTI	GATC	7 cut(s)	46, 400, 537, 670, 939, 1443, 1633
BstMAI	GTCTC	1 cut(s)	1361
BstMBI	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
BstMWI	GCNNNNNNNGC	5 cut(s)	107, 110, 296, 1154, 1862
BstNI	CCWGG	1 cut(s)	174
BstNSI	RCATGY	1 cut(s)	1750
BstSCI	CCNGG	2 cut(s)	172, 553
BstSFI	CTRYAG	3 cut(s)	776, 1501, 1569
BstSLI	GKGCMC	1 cut(s)	342
BstUI	CGCG	1 cut(s)	891
BstV1I	GCAGC	9 cut(s)	55, 77, 88, 132, 135, 279, 768, 779, 1751
BstV2I	GAAGAC	3 cut(s)	230, 1654, 1675
BstX2I	RGATCY	2 cut(s)	397, 1440
BstXI	CCANNNNNNTGG	1 cut(s)	1624
BstYI	RGATCY	2 cut(s)	397, 1440
BsuI	GTATCC	1 cut(s)	1871
BtgI	CCRYGG	2 cut(s)	889, 1866
BtsCI	GGATG	5 cut(s)	262, 724, 1073, 1172, 1187
BtsI	GCAGTG	4 cut(s)	190, 196, 202, 937
BtsIMutI	CAGTG	8 cut(s)	190, 196, 202, 537, 652, 750, 937, 1056
Cac8I	GCNNGC	6 cut(s)	152, 301, 342, 409, 1130, 1471
CaiI	CAGNNNCTG	2 cut(s)	1040, 1304
CfoI	GCGC	3 cut(s)	156, 275, 299
Cfr10I	RCCGGY	2 cut(s)	326, 407
Cfr13I	GGNCC	1 cut(s)	578
Cfr42I	CCGCGG	1 cut(s)	892
Csp6I	GTAC	4 cut(s)	685, 1259, 1750, 1817
CspCI	CAANNNNNGTGG	2 cut(s)	628, 663
CviAII	CATG	5 cut(s)	1201, 1343, 1526, 1747, 1867
CviQI	GTAC	4 cut(s)	685, 1259, 1750, 1817
DdeI	CTNAG	5 cut(s)	714, 847, 1004, 1297, 1835
DinI	GGCGCC	1 cut(s)	274
DpnI	GATC	7 cut(s)	45, 399, 536, 669, 938, 1442, 1632
DpnII	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
Eam1104I	CTCTTC	5 cut(s)	507, 908, 1091, 1416, 1826
EarI	CTCTTC	5 cut(s)	507, 908, 1091, 1416, 1826
Eco130I	CCWWGG	3 cut(s)	201, 1728, 1866
Eco47I	GGWCC	1 cut(s)	578
Eco47III	AGCGCT	1 cut(s)	298
Eco57I	CTGAAG	1 cut(s)	1451
Eco72I	CACGTG	1 cut(s)	1373
Eco88I	CYCGRG	1 cut(s)	292
EcoRII	CCWGG	1 cut(s)	172
EcoT14I	CCWWGG	3 cut(s)	201, 1728, 1866
EgeI	GGCGCC	1 cut(s)	274
EheI	GGCGCC	1 cut(s)	274
ErhI	CCWWGG	3 cut(s)	201, 1728, 1866
FaeI	CATG	5 cut(s)	1204, 1346, 1529, 1750, 1870
FalI	AAGNNNNNCTT	2 cut(s)	509, 541
FaqI	GGGAC	1 cut(s)	591
FatI	CATG	5 cut(s)	1200, 1342, 1525, 1746, 1866
FauI	CCCGC	2 cut(s)	349, 884
FauNDI	CATATG	1 cut(s)	763
FbaI	TGATCA	1 cut(s)	667
FblI	GTMKAC	1 cut(s)	1081
FokI	GGATG	5 cut(s)	269, 731, 1060, 1159, 1194
FspBI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
GlaI	GCGC	3 cut(s)	155, 274, 298
GsaI	CCCAGC	1 cut(s)	1211
GsuI	CTGGAG	1 cut(s)	1314
HaeII	RGCGCY	2 cut(s)	276, 300
HapII	CCGG	4 cut(s)	327, 408, 555, 981
HhaI	GCGC	3 cut(s)	156, 275, 299
Hin1I	GRCGYC	2 cut(s)	86, 273
Hin1II	CATG	5 cut(s)	1204, 1346, 1529, 1750, 1870
Hin6I	GCGC	3 cut(s)	154, 273, 297
HinP1I	GCGC	3 cut(s)	154, 273, 297
HindIII	AAGCTT	3 cut(s)	1126, 1397, 1916
HinfI	GANTC	9 cut(s)	56, 359, 705, 712, 989, 1083, 1108, 1548, 1848
HpaII	CCGG	4 cut(s)	327, 408, 555, 981
HphI	GGTGA	5 cut(s)	72, 316, 728, 1066, 1543
Hpy166II	GTNNAC	4 cut(s)	465, 550, 1082, 1586
Hpy188I	TCNGA	9 cut(s)	43, 432, 672, 1017, 1153, 1267, 1300, 1603, 1877
Hpy188III	TCNNGA	7 cut(s)	392, 401, 526, 585, 709, 716, 965
Hpy8I	GTNNAC	4 cut(s)	465, 550, 1082, 1586
Hpy99I	CGWCG	2 cut(s)	88, 380
HpyAV	CCTTC	5 cut(s)	82, 331, 511, 960, 965
HpyCH4III	ACNGT	3 cut(s)	337, 745, 1051
HpyCH4IV	ACGT	2 cut(s)	86, 1372
HpyCH4V	TGCA	9 cut(s)	767, 924, 1001, 1232, 1342, 1503, 1571, 1763, 1829
HpyF10VI	GCNNNNNNNGC	5 cut(s)	107, 110, 296, 1154, 1862
HpyF3I	CTNAG	5 cut(s)	714, 847, 1004, 1297, 1835
HpySE526I	ACGT	2 cut(s)	86, 1372
Hsp92I	GRCGYC	2 cut(s)	86, 273
Hsp92II	CATG	5 cut(s)	1204, 1346, 1529, 1750, 1870
HspAI	GCGC	3 cut(s)	154, 273, 297
KasI	GGCGCC	1 cut(s)	272
KroI	GCCGGC	1 cut(s)	407
KroNI	GCCGGC	1 cut(s)	409
Ksp22I	TGATCA	1 cut(s)	667
KspI	CCGCGG	1 cut(s)	892
Kzo9I	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
LmnI	GCTCC	3 cut(s)	164, 1466, 1928
Lsp1109I	GCAGC	9 cut(s)	55, 77, 88, 132, 135, 279, 768, 779, 1751
LweI	GCATC	1 cut(s)	1157
MaeI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
MaeII	ACGT	2 cut(s)	86, 1372
MaeIII	GTNAC	5 cut(s)	78, 472, 709, 1020, 1054
MalI	GATC	7 cut(s)	45, 399, 536, 669, 938, 1442, 1632
MboI	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
MflI	RGATCY	2 cut(s)	397, 1440
MhlI	GDGCHC	3 cut(s)	238, 342, 1858
MluCI	AATT	9 cut(s)	13, 260, 351, 387, 654, 1008, 1094, 1484, 1509
Mly113I	GGCGCC	1 cut(s)	273
MlyI	GAGTC	5 cut(s)	65, 353, 706, 1077, 1857
MmeI	TCCRAC	1 cut(s)	1251
MroNI	GCCGGC	1 cut(s)	407
MseI	TTAA	9 cut(s)	281, 609, 657, 758, 1245, 1512, 1757, 1841, 1933
MslI	CAYNNNNRTG	1 cut(s)	470
MspA1I	CMGCKG	9 cut(s)	68, 101, 126, 270, 344, 781, 891, 1539, 1742
MspI	CCGG	4 cut(s)	327, 408, 555, 981
MspR9I	CCNGG	2 cut(s)	174, 555
MvaI	CCWGG	1 cut(s)	174
MvnI	CGCG	1 cut(s)	891
MwoI	GCNNNNNNNGC	5 cut(s)	107, 110, 296, 1154, 1862
NaeI	GCCGGC	1 cut(s)	409
NarI	GGCGCC	1 cut(s)	273
NciI	CCSGG	1 cut(s)	555
NcoI	CCATGG	1 cut(s)	1866
NdeI	CATATG	1 cut(s)	763
NdeII	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
NgoMIV	GCCGGC	1 cut(s)	407
NheI	GCTAGC	1 cut(s)	299
NlaIII	CATG	5 cut(s)	1204, 1346, 1529, 1750, 1870
NlaIV	GGNNCC	5 cut(s)	130, 274, 579, 857, 1407
NmuCI	GTSAC	4 cut(s)	78, 472, 709, 1054
NspI	RCATGY	1 cut(s)	1750
OliI	CACNNNNGTG	1 cut(s)	470
PaeR7I	CTCGAG	1 cut(s)	292
PciI	ACATGT	1 cut(s)	1746
PdiI	GCCGGC	1 cut(s)	409
PfeI	GAWTC	4 cut(s)	705, 989, 1108, 1548
PflMI	CCANNNNNTGG	1 cut(s)	179
PleI	GAGTC	5 cut(s)	64, 353, 706, 1077, 1856
PluTI	GGCGCC	1 cut(s)	276
PmaCI	CACGTG	1 cut(s)	1373
PmlI	CACGTG	1 cut(s)	1373
PpsI	GAGTC	5 cut(s)	64, 353, 706, 1077, 1856
Ppu21I	YACGTR	1 cut(s)	1373
PscI	ACATGT	1 cut(s)	1746
Psp6I	CCWGG	1 cut(s)	172
PspCI	CACGTG	1 cut(s)	1373
PspFI	CCCAGC	1 cut(s)	1207
PspGI	CCWGG	1 cut(s)	172
PspN4I	GGNNCC	5 cut(s)	130, 274, 579, 857, 1407
PspPI	GGNCC	1 cut(s)	578
PspXI	VCTCGAGB	1 cut(s)	292
PstI	CTGCAG	2 cut(s)	1505, 1573
PstNI	CAGNNNCTG	2 cut(s)	1040, 1304
PsuI	RGATCY	2 cut(s)	397, 1440
PvuII	CAGCTG	4 cut(s)	68, 781, 1539, 1742
RsaI	GTAC	4 cut(s)	686, 1260, 1751, 1818
RsaNI	GTAC	4 cut(s)	685, 1259, 1750, 1817
RseI	CAYNNNNRTG	1 cut(s)	470
SacII	CCGCGG	1 cut(s)	892
SaqAI	TTAA	9 cut(s)	281, 609, 657, 758, 1245, 1512, 1757, 1841, 1933
Sau3AI	GATC	7 cut(s)	43, 397, 534, 667, 936, 1440, 1630
Sau96I	GGNCC	1 cut(s)	578
SchI	GAGTC	5 cut(s)	65, 353, 706, 1077, 1857
ScrFI	CCNGG	2 cut(s)	174, 555
SduI	GDGCHC	3 cut(s)	238, 342, 1858
SfaNI	GCATC	1 cut(s)	1157
SfcI	CTRYAG	3 cut(s)	776, 1501, 1569
SfoI	GGCGCC	1 cut(s)	274
Sfr274I	CTCGAG	1 cut(s)	292
Sfr303I	CCGCGG	1 cut(s)	892
SgrBI	CCGCGG	1 cut(s)	892
SinI	GGWCC	1 cut(s)	578
SlaI	CTCGAG	1 cut(s)	292
SmiMI	CAYNNNNRTG	1 cut(s)	470
SmlI	CTYRAG	3 cut(s)	136, 292, 458
SmoI	CTYRAG	3 cut(s)	136, 292, 458
Sse9I	AATT	9 cut(s)	13, 260, 351, 387, 654, 1008, 1094, 1484, 1509
SspDI	GGCGCC	1 cut(s)	272
SspMI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
StyD4I	CCNGG	2 cut(s)	172, 553
StyI	CCWWGG	3 cut(s)	201, 1728, 1866
TaaI	ACNGT	3 cut(s)	337, 745, 1051
TaiI	ACGT	2 cut(s)	89, 1375
TaqI	TCGA	2 cut(s)	293, 825
TaqII	GACCGA	1 cut(s)	449
TasI	AATT	9 cut(s)	13, 260, 351, 387, 654, 1008, 1094, 1484, 1509
TatI	WGTACW	2 cut(s)	1749, 1816
TauI	GCSGC	4 cut(s)	101, 113, 273, 278
TfiI	GAWTC	4 cut(s)	705, 989, 1108, 1548
Tru1I	TTAA	9 cut(s)	281, 609, 657, 758, 1245, 1512, 1757, 1841, 1933
Tru9I	TTAA	9 cut(s)	281, 609, 657, 758, 1245, 1512, 1757, 1841, 1933
TscAI	CASTG	8 cut(s)	190, 196, 202, 544, 652, 750, 937, 1056
TseFI	GTSAC	4 cut(s)	78, 472, 709, 1054
TseI	GCWGC	9 cut(s)	65, 68, 101, 120, 123, 267, 767, 781, 1739
Tsp45I	GTSAC	4 cut(s)	78, 472, 709, 1054
TspGWI	ACGGA	1 cut(s)	1534
TspRI	CASTG	8 cut(s)	190, 196, 202, 544, 652, 750, 937, 1056
Van91I	CCANNNNNTGG	1 cut(s)	179
VpaK11BI	GGWCC	1 cut(s)	578
XapI	RAATTY	3 cut(s)	13, 387, 1094
XceI	RCATGY	1 cut(s)	1750
XhoI	CTCGAG	1 cut(s)	292
XmiI	GTMKAC	1 cut(s)	1081
XspI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
ZraI	GACGTC	1 cut(s)	87

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.