Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0004514

Physical Location & Seq

Genomic Coordinates Forward (+)

27523779 .. 27530977

Gene Structure 7199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023726

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGCATTACAACTTCCAGACACATCGAAAAGTAGCTCTCCCTTCTCTTCTAGCCATAGTCTTCTCTGCTAATTTTCTTCCCCCGTTAAGAGAAAAGCTCCCAATGGAAAAACTAAATTCATCTGGGTTGGCAAGAACCAAGTCCGATCAACTGGTGGAGTCTGTGGCAGCTGCCTTCAAGTCACCGACGTCAAGTGAAGCCGCTGCTGTGGCGGCAGAGGGCGGCAGCGGAACCCTCTCAAGGAAGTCAAGCAGGCGCATGATGGGAGCTTCGCCAGGGCGTGGCAGTGGCAGTGGCAGTGCCAAAGGTAGCACACACATAAGGAAGACTAGGAGTGCTCAAATGAAGTTTGAGCTGGATGAATTGAACAGCAGCGCCGCTTTAAGCAGAGCCTCGAGCGCTAGCTTGGGGTTCTCATTTTCCTTCACCGGCTTTACTGTGCCCGCTGATGAAATTGCAGACTCAAAGCCTTTTAGCGACGATGATGAAATTCCCGAAGATCTTGAAGCTGGCAACCGAAGACCAAAGTTTCAGACCGAACCCACCCTGCCGATTTATCTCAAGTTCACAGATGTGACATATAAGGTCATTCTCAAAGGAATGAGGACAAATGAAGAGAAGGACATCTTGAATGGGATCACTGGTTCAGTAAACCCCGGCGAAGTTCTTGCCCTGATGGGACCATCAGGAAGTGGAAAGACCACACTCCTTAATCTGCTTGGAGGCAGGATAGCCCGAGGCAATGTCAGTGGTTCAATTAACTACAATGATCAGACATATTCCAAGTACCTAAAGAGCAGGATAGGATTCGTGACTCAGGATGATGTTCTATTTCCTCACCTGACAGTGAAAGAAACATTAACATATGCAGCCCTCCTACGGCTGCCAAAGATATTGACAAAAGAGCAGAAAAAAAAACGAGCAGTCGATGTCATCTATGAGCTAGGCTTAGAGAGGTGCCAAGACACTATGATTGGTGGCTCGTTTGTCCGCGGGGTTTCAGGTGGAGAGAGGAAGAGAGTTTGCATTGGCAATGAGATCATAATCAACCCTTCCCTTCTGTTTCTTGATGAACCAACCTCCGGCTTGGATTCAACAACTGCACTTAGAATTGTTCAGATGTTACAAGACATAGCAGAGGCTGGAAAAACAGTGGTGACAACAATCCACCAACCATCCAGTAGACTCTTCCACAAATTTGACAAGTTGATTCTTCTTGGGAAAGGAAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGGTTTATTTCTCATCCATAGGATGTTCTCCACTTATTGCCATGAACCCAGCAGAGTTCTTGCTAGACCTTGCAAACGGAAACATTAACGATGTTTCTGTACCATCAGAGTTGGAGGACAAAGTTCAAATGGAAAACTCAGAAGCTGATACAAGAAATGGAAAGCCATCTCCAGCAGTTGTGCATGAGTATCTTGTGGAAGCCTATGAGACACGTGTGGCTGACGAGGAGAAGAAGAAGCTTATGGTTCCTCTTCCCCTTGATGATGAACTGAAGTTGAAGATCGCTTTTTCAAAACGAGAATGGGGAGCAAGCTGGTGGGAACAATTTTCTATCTTATTCTGCAGAGGAATTAAAGAACGGAAGCATGACTATTTCAGCTGGTTGAGAATCACCCAAGTTCTTTCCACTGCAGTTATTTTGGGTTTACTATGGTGGCAGTCAGATAGCCACACTACCAAAGGACTGGAAGATCAGGCAGGGCTACTTTTCTTCATTGCTGTCTTCTGGGGATTTTTCCCTGTCTTCACAGCAATCTTCACATTTCCTCAAGAAAGAGCTATGCTGACCAAGGAACGAGCAGCTGACATGTACAGATTAAGTGCATATTTTGTGGCTAGGACTACAAGCGACCTCCCACTTGACCTATTGCTTCCTGTACTCTTCCTTGCAATCGTATATTTCATGGCAGGCTTAAGGCTCAGTACTGAAACCTTTTTCCTAAGCATGCTTATAGTTTTCCTATGCATTGTGGCAGCTCAGGGACTTGGATTAGCTATTGGAGCTACATTGATGGACTTAAAGAAGGCAACAACTCTGGCTTCAGTAACTGTGATGACATTCATGCTGGCTGGGGGGTTCTTCGTGAAAAAAGTTCCGGTGTTCATATCTTGGATCCGCTATTTGTCTTTCAACTACCACACATACAAGCTTCTTCTGAAGGTGCAGTTTGAAGACATAACACCCACCATTAATGGGTCCAGCACTGATTGTAGTTTGACAGGAGTTGGTGCTCTTGTAGCCATGGTTTTCGGATACCGATTATTGGCATACCTTTCTTTGAGGAGAATGAAGCTTCAAGCTGGAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0010148 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042044 GO:0042221 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

784

Amino Acids

86.34

Weight (kDa)

8.98

Isoelectric Point (pI)

32.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	210 - 361	3e-29	ABC transporter
ABC2_membrane_7	PF19055	390 - 451	2.5e-07	ABC-2 type transporter
ABC2_membrane_7	PF19055	518 - 680	4.1e-06	ABC-2 type transporter
ABC2_membrane	PF01061	528 - 737	2.2e-47	ABC-2 type transporter
ABC2_membrane_3	PF12698	582 - 772	2.1e-06	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06530 AT5G06530 AT5G06530 AT5G06530
fragaria_vesca	FvH4_6g21010 FvH4_6g21010 FvH4_6g21010
malus_domestica	MD12G1045900.v1.1 MD14G1044500.v1.1
prunus_persica	Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1
pyrus_communis	pycom12g03940 pycom14g03770
rosa_chinensis	RchiOBHm_Chr3g0477391
rosa_laevigata	RLG00000023726
rosa_multiflora	Rmu_ssc0000341.1_g000030
rosa_roxburghii	Rroxscaffold_1G00008820 Rroxscaffold_3G00241160 Rroxscaffold_4G00299920 Rroxscaffold_6G00404230 Rroxscaffold_6G00404700
rosa_rugosa	Rorug03G0159900 Rorug03G0160000 Rorug03G0160100
rosa_samantha	Rh3AG210600 Rh3BG243800 Rh3CG237700 Rh3DG237400
rosa_wichuraiana	Rw3G019080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	191
AccB1I	GGYRCC	1 cut(s)	957
AccB7I	CCANNNNNTGG	1 cut(s)	281
AccI	GTMKAC	1 cut(s)	1183
AccII	CGCG	1 cut(s)	993
AciI	CCGC	9 cut(s)	201, 212, 222, 228, 378, 444, 991, 993, 2158
AclWI	GGATC	3 cut(s)	644, 2149, 2162
AcsI	RAATTY	3 cut(s)	115, 489, 1196
AcuI	CTGAAG	3 cut(s)	1553, 2067, 2219
AcvI	CACGTG	1 cut(s)	1475
AcyI	GRCGYC	1 cut(s)	188
AfaI	GTAC	5 cut(s)	788, 1362, 1853, 1920, 1966
AfeI	AGCGCT	1 cut(s)	400
AfiI	CCNNNNNNNGG	6 cut(s)	240, 281, 879, 1082, 2235, 2305
AflII	CTTAAG	1 cut(s)	1954
AflIII	ACRYGT	3 cut(s)	1472, 1474, 1848
AjnI	CCWGG	1 cut(s)	274
AleI	CACNNNNGTG	1 cut(s)	572
AloI	GAACNNNNNNTCC	2 cut(s)	628, 660
Alw21I	GWGCWC	2 cut(s)	340, 2275
Alw26I	GTCTC	1 cut(s)	1463
AlwI	GGATC	3 cut(s)	644, 2149, 2162
AlwNI	CAGNNNCTG	3 cut(s)	1142, 1406, 2090
Ama87I	CYCGRG	2 cut(s)	394, 735
Aor51HI	AGCGCT	1 cut(s)	400
ApeKI	GCWGC	9 cut(s)	167, 170, 203, 225, 372, 869, 883, 1841, 2015
ApoI	RAATTY	3 cut(s)	115, 489, 1196
AseI	ATTAAT	1 cut(s)	2232
AspLEI	GCGC	3 cut(s)	258, 377, 401
AspS9I	GGNCC	2 cut(s)	680, 2238
AsuC2I	CCSGG	1 cut(s)	657
AsuHPI	GGTGA	5 cut(s)	174, 418, 830, 1168, 1645
AsuNHI	GCTAGC	1 cut(s)	401
AvaI	CYCGRG	2 cut(s)	394, 735
AvaII	GGWCC	2 cut(s)	680, 2238
BaeGI	GKGCMC	1 cut(s)	444
BamHI	GGATCC	1 cut(s)	2154
BanI	GGYRCC	1 cut(s)	957
BbrPI	CACGTG	1 cut(s)	1475
BbsI	GAAGAC	6 cut(s)	52, 332, 526, 1756, 1777, 2220
Bbv12I	GWGCWC	2 cut(s)	340, 2275
BbvI	GCAGC	9 cut(s)	157, 179, 190, 237, 384, 870, 881, 1853, 2027
BccI	CCATC	7 cut(s)	256, 670, 691, 1183, 1372, 1435, 2047
BceAI	ACGGC	1 cut(s)	896
BcgI	CGANNNNNNTGC	2 cut(s)	650, 684
BciT130I	CCWGG	1 cut(s)	276
BciVI	GTATCC	1 cut(s)	2288
BclI	TGATCA	1 cut(s)	769
BcnI	CCSGG	1 cut(s)	657
BcoDI	GTCTC	1 cut(s)	1463
BfaI	CTAG	6 cut(s)	50, 330, 402, 944, 1325, 1878
BfmI	CTRYAG	2 cut(s)	1603, 1671
BfoI	RGCGCY	2 cut(s)	378, 402
BfrI	CTTAAG	1 cut(s)	1954
BfuI	GTATCC	1 cut(s)	2288
BglII	AGATCT	1 cut(s)	499
BmcAI	AGTACT	1 cut(s)	1966
Bme1390I	CCNGG	2 cut(s)	276, 657
Bme18I	GGWCC	2 cut(s)	680, 2238
BmeT110I	CYCGRG	2 cut(s)	394, 735
BmgT120I	GGNCC	2 cut(s)	680, 2238
BmiI	GGNNCC	6 cut(s)	232, 681, 959, 1509, 2156, 2239
BmrFI	CCNGG	2 cut(s)	276, 657
BmsI	GCATC	1 cut(s)	1259
BmtI	GCTAGC	1 cut(s)	405
BpiI	GAAGAC	6 cut(s)	52, 332, 526, 1756, 1777, 2220
BplI	GAGNNNNNCTC	2 cut(s)	81, 113
BpmI	CTGGAG	1 cut(s)	1416
Bpu10I	CCTNAGC	2 cut(s)	1982, 2019
BpuEI	CTTGAG	3 cut(s)	223, 545, 1794
BpuMI	CCSGG	1 cut(s)	657
BsaAI	YACGTR	1 cut(s)	1475
BsaBI	GATNNNNATC	1 cut(s)	1043
BsaHI	GRCGYC	1 cut(s)	188
BsaJI	CCNNGG	6 cut(s)	275, 655, 736, 991, 1830, 2283
BsaWI	WCCGGW	1 cut(s)	2137
Bsc4I	CCNNNNNNNGG	6 cut(s)	240, 281, 879, 1082, 2235, 2305
Bse118I	RCCGGY	1 cut(s)	428
Bse1I	ACTGG	4 cut(s)	156, 646, 1179, 1731
Bse3DI	GCAATG	4 cut(s)	748, 1039, 1266, 1755
Bse8I	GATNNNNATC	1 cut(s)	1043
BseBI	CCWGG	1 cut(s)	276
BseDI	CCNNGG	6 cut(s)	275, 655, 736, 991, 1830, 2283
BseGI	GGATG	5 cut(s)	364, 826, 1175, 1274, 1289
BseJI	GATNNNNATC	1 cut(s)	1043
BseLI	CCNNNNNNNGG	6 cut(s)	240, 281, 879, 1082, 2235, 2305
BseMI	GCAATG	4 cut(s)	748, 1039, 1266, 1755
BseMII	CTCAG	4 cut(s)	830, 1413, 1975, 2033
BseNI	ACTGG	4 cut(s)	156, 646, 1179, 1731
BseRI	GAGGAG	2 cut(s)	1502, 2338
BseSI	GKGCMC	1 cut(s)	444
BseXI	GCAGC	9 cut(s)	157, 179, 190, 237, 384, 870, 881, 1853, 2027
BseYI	CCCAGC	2 cut(s)	1309, 2111
BsgI	GTGCAG	2 cut(s)	1086, 2225
Bsh1236I	CGCG	1 cut(s)	993
BshNI	GGYRCC	1 cut(s)	957
BsiHKAI	GWGCWC	2 cut(s)	340, 2275
BsiHKCI	CYCGRG	2 cut(s)	394, 735
BsiSI	CCGG	4 cut(s)	429, 657, 1083, 2138
BslFI	GGGAC	2 cut(s)	693, 2037
BslI	CCNNNNNNNGG	6 cut(s)	240, 281, 879, 1082, 2235, 2305
BsmAI	GTCTC	1 cut(s)	1463
BsmFI	GGGAC	2 cut(s)	693, 2037
BsoBI	CYCGRG	2 cut(s)	394, 735
Bsp1286I	GDGCHC	3 cut(s)	340, 444, 2275
Bsp1407I	TGTACA	1 cut(s)	1851
Bsp143I	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
Bsp19I	CCATGG	1 cut(s)	2283
BspACI	CCGC	9 cut(s)	201, 212, 222, 228, 378, 444, 991, 993, 2158
BspCNI	CTCAG	4 cut(s)	829, 1412, 1974, 2032
BspFNI	CGCG	1 cut(s)	993
BspLI	GGNNCC	6 cut(s)	232, 681, 959, 1509, 2156, 2239
BspMAI	CTGCAG	2 cut(s)	1607, 1675
BspOI	GCTAGC	1 cut(s)	405
BspPI	GGATC	3 cut(s)	644, 2149, 2162
BspT107I	GGYRCC	1 cut(s)	957
BspTI	CTTAAG	1 cut(s)	1954
BsrDI	GCAATG	4 cut(s)	748, 1039, 1266, 1755
BsrFI	RCCGGY	1 cut(s)	428
BsrGI	TGTACA	1 cut(s)	1851
BsrI	ACTGG	4 cut(s)	156, 646, 1179, 1731
BssAI	RCCGGY	1 cut(s)	428
BssECI	CCNNGG	6 cut(s)	275, 655, 736, 991, 1830, 2283
BssMI	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
BssNI	GRCGYC	1 cut(s)	188
BssT1I	CCWWGG	2 cut(s)	1830, 2283
Bst2UI	CCWGG	1 cut(s)	276
Bst4CI	ACNGT	4 cut(s)	439, 847, 1153, 2092
Bst6I	CTCTTC	6 cut(s)	51, 609, 1010, 1193, 1518, 1928
BstACI	GRCGYC	1 cut(s)	188
BstAFI	CTTAAG	1 cut(s)	1954
BstAUI	TGTACA	1 cut(s)	1851
BstBAI	YACGTR	1 cut(s)	1475
BstC8I	GCNNGC	9 cut(s)	254, 403, 444, 511, 1232, 1573, 1951, 1988, 2109
BstDEI	CTNAG	7 cut(s)	816, 949, 1106, 1399, 1961, 1982, 2019
BstDSI	CCRYGG	2 cut(s)	991, 2283
BstF5I	GGATG	5 cut(s)	364, 826, 1175, 1274, 1289
BstFNI	CGCG	1 cut(s)	993
BstH2I	RGCGCY	2 cut(s)	378, 402
BstHHI	GCGC	3 cut(s)	258, 377, 401
BstKTI	GATC	8 cut(s)	148, 502, 639, 772, 1041, 1545, 1735, 2157
BstMAI	GTCTC	1 cut(s)	1463
BstMBI	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
BstMWI	GCNNNNNNNGC	6 cut(s)	209, 212, 398, 1256, 2042, 2279
BstNI	CCWGG	1 cut(s)	276
BstNSI	RCATGY	2 cut(s)	1852, 1990
BstSCI	CCNGG	2 cut(s)	274, 655
BstSFI	CTRYAG	2 cut(s)	1603, 1671
BstSLI	GKGCMC	1 cut(s)	444
BstUI	CGCG	1 cut(s)	993
BstV1I	GCAGC	9 cut(s)	157, 179, 190, 237, 384, 870, 881, 1853, 2027
BstV2I	GAAGAC	6 cut(s)	52, 332, 526, 1756, 1777, 2220
BstX2I	RGATCY	2 cut(s)	499, 2154
BstXI	CCANNNNNNTGG	1 cut(s)	1726
BstYI	RGATCY	2 cut(s)	499, 2154
BsuI	GTATCC	1 cut(s)	2288
BtgI	CCRYGG	2 cut(s)	991, 2283
BtsCI	GGATG	5 cut(s)	364, 826, 1175, 1274, 1289
BtsI	GCAGTG	4 cut(s)	292, 298, 304, 1668
BtsIMutI	CAGTG	9 cut(s)	292, 298, 304, 639, 754, 852, 1158, 1668, 2244
Cac8I	GCNNGC	9 cut(s)	254, 403, 444, 511, 1232, 1573, 1951, 1988, 2109
CaiI	CAGNNNCTG	3 cut(s)	1142, 1406, 2090
CfoI	GCGC	3 cut(s)	258, 377, 401
Cfr10I	RCCGGY	1 cut(s)	428
Cfr13I	GGNCC	2 cut(s)	680, 2238
Cfr42I	CCGCGG	1 cut(s)	994
Csp6I	GTAC	5 cut(s)	787, 1361, 1852, 1919, 1965
CspCI	CAANNNNNGTGG	2 cut(s)	730, 765
CviAII	CATG	9 cut(s)	259, 1303, 1445, 1628, 1849, 1945, 1987, 2104, 2284
CviQI	GTAC	5 cut(s)	787, 1361, 1852, 1919, 1965
DdeI	CTNAG	7 cut(s)	816, 949, 1106, 1399, 1961, 1982, 2019
DpnI	GATC	8 cut(s)	147, 501, 638, 771, 1040, 1544, 1734, 2156
DpnII	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
Eam1104I	CTCTTC	6 cut(s)	51, 609, 1010, 1193, 1518, 1928
EarI	CTCTTC	6 cut(s)	51, 609, 1010, 1193, 1518, 1928
Eco130I	CCWWGG	2 cut(s)	1830, 2283
Eco47I	GGWCC	2 cut(s)	680, 2238
Eco47III	AGCGCT	1 cut(s)	400
Eco57I	CTGAAG	3 cut(s)	1553, 2067, 2219
Eco72I	CACGTG	1 cut(s)	1475
Eco88I	CYCGRG	2 cut(s)	394, 735
EcoRII	CCWGG	1 cut(s)	274
EcoT14I	CCWWGG	2 cut(s)	1830, 2283
EcoT22I	ATGCAT	2 cut(s)	6, 2009
ErhI	CCWWGG	2 cut(s)	1830, 2283
FaeI	CATG	9 cut(s)	262, 1306, 1448, 1631, 1852, 1948, 1990, 2107, 2287
FalI	AAGNNNNNCTT	2 cut(s)	611, 643
FaqI	GGGAC	2 cut(s)	693, 2037
FatI	CATG	9 cut(s)	258, 1302, 1444, 1627, 1848, 1944, 1986, 2103, 2283
FauI	CCCGC	2 cut(s)	451, 986
FauNDI	CATATG	1 cut(s)	865
FbaI	TGATCA	1 cut(s)	769
FblI	GTMKAC	1 cut(s)	1183
FokI	GGATG	5 cut(s)	371, 833, 1162, 1261, 1296
FspBI	CTAG	6 cut(s)	50, 330, 402, 944, 1325, 1878
GlaI	GCGC	3 cut(s)	257, 376, 400
GsaI	CCCAGC	2 cut(s)	1313, 2115
GsuI	CTGGAG	1 cut(s)	1416
HaeII	RGCGCY	2 cut(s)	378, 402
HapII	CCGG	4 cut(s)	429, 657, 1083, 2138
HhaI	GCGC	3 cut(s)	258, 377, 401
Hin1I	GRCGYC	1 cut(s)	188
Hin1II	CATG	9 cut(s)	262, 1306, 1448, 1631, 1852, 1948, 1990, 2107, 2287
Hin6I	GCGC	3 cut(s)	256, 375, 399
HinP1I	GCGC	3 cut(s)	256, 375, 399
HindIII	AAGCTT	4 cut(s)	1228, 1499, 2189, 2333
HinfI	GANTC	8 cut(s)	158, 461, 807, 814, 1091, 1185, 1210, 1650
HpaII	CCGG	4 cut(s)	429, 657, 1083, 2138
HphI	GGTGA	5 cut(s)	174, 418, 830, 1168, 1645
Hpy166II	GTNNAC	4 cut(s)	567, 652, 1184, 1688
Hpy8I	GTNNAC	4 cut(s)	567, 652, 1184, 1688
Hpy99I	CGWCG	2 cut(s)	190, 482
HpyAV	CCTTC	8 cut(s)	51, 184, 433, 613, 1062, 1067, 2059, 2194
HpyCH4III	ACNGT	4 cut(s)	439, 847, 1153, 2092
HpyCH4IV	ACGT	2 cut(s)	188, 1474
HpyF10VI	GCNNNNNNNGC	6 cut(s)	209, 212, 398, 1256, 2042, 2279
HpyF3I	CTNAG	7 cut(s)	816, 949, 1106, 1399, 1961, 1982, 2019
HpySE526I	ACGT	2 cut(s)	188, 1474
Hsp92I	GRCGYC	1 cut(s)	188
Hsp92II	CATG	9 cut(s)	262, 1306, 1448, 1631, 1852, 1948, 1990, 2107, 2287
HspAI	GCGC	3 cut(s)	256, 375, 399
Ksp22I	TGATCA	1 cut(s)	769
KspI	CCGCGG	1 cut(s)	994
Kzo9I	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
LmnI	GCTCC	5 cut(s)	102, 266, 1568, 2042, 2345
Lsp1109I	GCAGC	9 cut(s)	157, 179, 190, 237, 384, 870, 881, 1853, 2027
LweI	GCATC	1 cut(s)	1259
MaeI	CTAG	6 cut(s)	50, 330, 402, 944, 1325, 1878
MaeII	ACGT	2 cut(s)	188, 1474
MaeIII	GTNAC	6 cut(s)	180, 574, 811, 1122, 1156, 2086
MalI	GATC	8 cut(s)	147, 501, 638, 771, 1040, 1544, 1734, 2156
MboI	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
MflI	RGATCY	2 cut(s)	499, 2154
MhlI	GDGCHC	3 cut(s)	340, 444, 2275
MlyI	GAGTC	4 cut(s)	167, 455, 808, 1179
MmeI	TCCRAC	1 cut(s)	1353
Mph1103I	ATGCAT	2 cut(s)	6, 2009
MslI	CAYNNNNRTG	1 cut(s)	572
MspA1I	CMGCKG	7 cut(s)	170, 203, 228, 446, 993, 1641, 1844
MspCI	CTTAAG	1 cut(s)	1954
MspI	CCGG	4 cut(s)	429, 657, 1083, 2138
MspR9I	CCNGG	2 cut(s)	276, 657
MvaI	CCWGG	1 cut(s)	276
MvnI	CGCG	1 cut(s)	993
MwoI	GCNNNNNNNGC	6 cut(s)	209, 212, 398, 1256, 2042, 2279
NciI	CCSGG	1 cut(s)	657
NcoI	CCATGG	1 cut(s)	2283
NdeI	CATATG	1 cut(s)	865
NdeII	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
NheI	GCTAGC	1 cut(s)	401
NlaIII	CATG	9 cut(s)	262, 1306, 1448, 1631, 1852, 1948, 1990, 2107, 2287
NlaIV	GGNNCC	6 cut(s)	232, 681, 959, 1509, 2156, 2239
NmuCI	GTSAC	4 cut(s)	180, 574, 811, 1156
NsiI	ATGCAT	2 cut(s)	6, 2009
NspI	RCATGY	2 cut(s)	1852, 1990
OliI	CACNNNNGTG	1 cut(s)	572
PaeI	GCATGC	1 cut(s)	1990
PaeR7I	CTCGAG	1 cut(s)	394
PciI	ACATGT	1 cut(s)	1848
PfeI	GAWTC	4 cut(s)	807, 1091, 1210, 1650
PflMI	CCANNNNNTGG	1 cut(s)	281
PleI	GAGTC	4 cut(s)	166, 455, 808, 1179
PmaCI	CACGTG	1 cut(s)	1475
PmlI	CACGTG	1 cut(s)	1475
PpsI	GAGTC	4 cut(s)	166, 455, 808, 1179
Ppu21I	YACGTR	1 cut(s)	1475
PscI	ACATGT	1 cut(s)	1848
PshBI	ATTAAT	1 cut(s)	2232
Psp6I	CCWGG	1 cut(s)	274
PspCI	CACGTG	1 cut(s)	1475
PspFI	CCCAGC	2 cut(s)	1309, 2111
PspGI	CCWGG	1 cut(s)	274
PspN4I	GGNNCC	6 cut(s)	232, 681, 959, 1509, 2156, 2239
PspPI	GGNCC	2 cut(s)	680, 2238
PspXI	VCTCGAGB	1 cut(s)	394
PstI	CTGCAG	2 cut(s)	1607, 1675
PstNI	CAGNNNCTG	3 cut(s)	1142, 1406, 2090
PsuI	RGATCY	2 cut(s)	499, 2154
PvuII	CAGCTG	3 cut(s)	170, 1641, 1844
RsaI	GTAC	5 cut(s)	788, 1362, 1853, 1920, 1966
RsaNI	GTAC	5 cut(s)	787, 1361, 1852, 1919, 1965
RseI	CAYNNNNRTG	1 cut(s)	572
SacII	CCGCGG	1 cut(s)	994
Sau3AI	GATC	8 cut(s)	145, 499, 636, 769, 1038, 1542, 1732, 2154
Sau96I	GGNCC	2 cut(s)	680, 2238
ScaI	AGTACT	1 cut(s)	1966
SchI	GAGTC	4 cut(s)	167, 455, 808, 1179
ScrFI	CCNGG	2 cut(s)	276, 657
SduI	GDGCHC	3 cut(s)	340, 444, 2275
SfaNI	GCATC	1 cut(s)	1259
SfcI	CTRYAG	2 cut(s)	1603, 1671
Sfr274I	CTCGAG	1 cut(s)	394
Sfr303I	CCGCGG	1 cut(s)	994
SgrBI	CCGCGG	1 cut(s)	994
SinI	GGWCC	2 cut(s)	680, 2238
SlaI	CTCGAG	1 cut(s)	394
SmiMI	CAYNNNNRTG	1 cut(s)	572
SmlI	CTYRAG	5 cut(s)	238, 394, 560, 1809, 1954
SmoI	CTYRAG	5 cut(s)	238, 394, 560, 1809, 1954
SphI	GCATGC	1 cut(s)	1990
SsiI	CCGC	9 cut(s)	201, 212, 222, 228, 378, 444, 991, 993, 2158
SspMI	CTAG	6 cut(s)	50, 330, 402, 944, 1325, 1878
StyD4I	CCNGG	2 cut(s)	274, 655
StyI	CCWWGG	2 cut(s)	1830, 2283
TaaI	ACNGT	4 cut(s)	439, 847, 1153, 2092
TaiI	ACGT	2 cut(s)	191, 1477
TaqI	TCGA	3 cut(s)	25, 395, 927
TaqII	GACCGA	1 cut(s)	551
TatI	WGTACW	3 cut(s)	1851, 1918, 1964
TauI	GCSGC	4 cut(s)	203, 215, 225, 380
TfiI	GAWTC	4 cut(s)	807, 1091, 1210, 1650
TscAI	CASTG	9 cut(s)	292, 298, 304, 646, 754, 852, 1158, 1675, 2251
TseFI	GTSAC	4 cut(s)	180, 574, 811, 1156
TseI	GCWGC	9 cut(s)	167, 170, 203, 225, 372, 869, 883, 1841, 2015
Tsp45I	GTSAC	4 cut(s)	180, 574, 811, 1156
TspGWI	ACGGA	2 cut(s)	1353, 1636
TspRI	CASTG	9 cut(s)	292, 298, 304, 646, 754, 852, 1158, 1675, 2251
Van91I	CCANNNNNTGG	1 cut(s)	281
Vha464I	CTTAAG	1 cut(s)	1954
VpaK11BI	GGWCC	2 cut(s)	680, 2238
VspI	ATTAAT	1 cut(s)	2232
XapI	RAATTY	3 cut(s)	115, 489, 1196
XceI	RCATGY	2 cut(s)	1852, 1990
XhoI	CTCGAG	1 cut(s)	394
XmiI	GTMKAC	1 cut(s)	1183
XspI	CTAG	6 cut(s)	50, 330, 402, 944, 1325, 1878
ZraI	GACGTC	1 cut(s)	189
ZrmI	AGTACT	1 cut(s)	1966
Zsp2I	ATGCAT	2 cut(s)	6, 2009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.