Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0004514

Physical Location & Seq

Genomic Coordinates Reverse (-)

23067772 .. 23087130

Gene Structure 19359 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG243800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3015 bp

ATGAGTCAGTGGCGGCGAGGTGGGGATCTGAAGTGCTGCAATCGGATCGGATTGTTCCGATCTGGTTTGGGCATGCTTCGATCTTGTTTGGAGCCGCTGTGTGGCAAGGGGTGGAGATGGTTGGGAGGGGAGATGATTCTTGCCGGCGTGATGGGGTTGAAGGACGGAAGGAGGGATGGTCGGCGCCTGCTCGGTGCGACAGCCGTTGGCCCTATCTTGACAGAGGTTAATGGCGATATTCATCGTCATGATGGATTTCAGGCTGGGATTGGATTATTGTTTGGGGATGGAGATCGATATGGGGCAGACTCTGTTCCTAGTTTCTTGAGTTGGGATGTTGGCGACCATGAGTTGCTCTTGGTTTTTCCTTTTAGATTTATGGACTTTAAGGCAGATTGGTTGACGACATCGGTTGATGGTGGTAGTGGCGGCTTGTGGGTTCCAGATATGCTGGGTCGTGACTCTGACGGGGGCAGCTATTTAGGGGTTATAGGCCACAGCGGTGGTTTTGCTGCATCTAGGTGTTGGTCGCAATTCTCTACTCGTGTCGGCGCTGGGAGCAACGATGTAGATTGGGACAAGGCTACCCTGTTAAAAGGTTTGGATCCGCTCGGTGGTGATGGTGGCAGTGATCGTGCTGTGGTGGTGGACGACCAAGTTGTGATAGCGGCACCGGTGACATTGCTGCCGTCGATGGAGATTCTGTGCATGCAAGGGTTTGCCATGGTTTGGAATATTGGGCCTCAAGTGGGCCGGATGGATTGGATGGAAAAACTAAATTCATCTGGGTTGGCAAGAACCAAGTCCGATCAACTGGTGGAGTCTGTGGCAGCTGCCTTCAAGTCACCGACGTCAAGTGAAGCCGCTGCTGTGGCGGCAGAGGGCGGCAGCGGAACCCTCTCAAGGAAGTCAAGCAGGCGCATGATGGGAGCTTCGCCAGGGCGTGGCAGTGGCAGTGGCAGTGCCAAAGGTAGCACACACATAAGGAAGACTAGAAGTGCTCAAATGAAGTTTGAGCTGGATGAATTGAGCAGCGGCGCCGCTTTAAGCAGAGCCTCGAGCGCTAGCTTGGGGTTCTCATTCTCCTTCACCGGCTTTACTGTGCCCGCTGATGAAATTGCGGACTCAAAGCCTTTTAGCGACGATGATGAAATTCCCGAAGATCTTGAAGCCGGCAACCGAAAACCAAAGTTTCAGACCGAACCCACCATGCCGATTTATCTCAAGTTCACAGATGTGACATACAAGGTCATTCTCAAAGGAATGAGGACAAATGGAGAGAAGGACATCTTGAATGGGATCACTGGTTCAGTAAACCCCGGCGAAGTTCTTGCCCTGATGGGACCATCAGGAAGTGGAAAGACCACACTCCTTAATCTGCTTGGAGGCAGGATAGCCAGAGGCAATGTCAGTGGTTCAATTAACTACAATGATCAGACATATTCCAAGTACCTAAAGCGCAGGATAGGATTCGTGACTCAGGATGATGTTCTATTTCCTCACCTGACAGTGAAAGAAACATTAACATATGCAGCCCTCCTACAGCTGCCAAAGACATTGACAAAAGAGCAGAAAAAAAAACGAGCAGTCGACGTCATCTATGAGCTAGGCTTAGAGAGGTGCCAAGACACTATGATTGGTGGCTCGTTTGTCCGCGGGGTTTCAGGTGGAGAGAGGAAGAGAGTTTGCATTGGCAATGAGATCATAATCAATCCTTCCCTTCTGTTTCTTGATGAACCAACCTCCGGCTTGGATTCAACAACTGCACTTAGAATTGTTCAGATGTTACAAGACATAGCAGAGGCTGGAAAAACAGTGGTGACAACAATCCACCAACCATCCAGTAGACTCTTCCACAAATTTGACAAGTTGATTCTTCTTGGGAAAGGAAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGGTTTATTTCTCATCCATAGGATGTTCTCCACTTATTGCCATGAACCCAGCAGAGTTCTTGCTAGACCTTGCAAACGGAAACATTAACGATGTTTCTGTACCATCAGAGTTGGAGGACAAAGTTCAAATGGAAAACTCAGAAGCTGATACAAGAAATGGAAAGCCATCTCCAGCAGTTGTGCATGAGTATCTTGTGGAAGCCTATGAGACACGTGTGGCTGACGAGGAGAAGAAGAAGCTTATGGTTCCTCTTCCCCTTGATGATGAACTGAAGTTGAAGATCTCTTTTGCCAAACGAGAATGGGGAGCAAGCTGGTGGGAACAATTTTCTATCTTATTCTGCAGAGGAATTAAAGAACGGAAGCATGACTATTTCAGCTGGTTGAGAATCACCCAAGTTCTTTCCACTGCAGTTATTTTGGGTTTACTATGGTGGCAGTCAGATAGCCACACTACCAAAGGACTGGAAGATCAGGCAGGGCTACTTTTCTTCATTGCTGTCTTCTGGGGATTTTTCCCTGTCTTCACAGCAATCTTCACATTTCCTCAAGAAAGAGCTATGCTGACCAAGGAACGAGCAGCCGACATGTACAGATTAAGTGCATATTTTGTGGCTAGGACTACAAGCGACCTCCCACTTGACCTATTGCTTCCTGTACTCTTCCTTGCTATCGTATATTTTATGGCAGGCTTAAGGCTCAGTACTGAAACCTTTTTCCTAAGCATGCTTATAGTTTTCCTATGCATTGTGGCAGCTCAGGGACTTGGATTAGCTATTGGAGCTACATTGATGGACTTAAAGAAGGCAACAACTCTGGCTTCAGTAACTGTGATGACATTCATGCTGGCTGGGGGGTTCTTCGTGAAAAACGTTCCGGTGTTCATATCTTGGATCCGCTATATGTCTTTCAACTACCACACATACAAGCTTCTTCTGAAGGTGCAGTTTGAAGACATAATACCCACCATTAATGGGTCCAGCACTGATTGTAGTTTAACAGGAGTTGGTGCTCTTGTAGCCATGGTTTTCGGATACCGATTATTGGCATACCTTTCTTTGAGGAGAATGAAGCTTCAAGCTGGAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0010148 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042044 GO:0042221 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

1004

Amino Acids

109.68

Weight (kDa)

7.52

Isoelectric Point (pI)

34.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	431 - 582	2.5e-29	ABC transporter
ABC2_membrane_7	PF19055	611 - 672	3e-07	ABC-2 type transporter
ABC2_membrane	PF01061	749 - 958	1.2e-46	ABC-2 type transporter
ABC2_membrane_3	PF12698	803 - 993	2.1e-06	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06530 AT5G06530 AT5G06530 AT5G06530
fragaria_vesca	FvH4_6g21010 FvH4_6g21010 FvH4_6g21010
malus_domestica	MD12G1045900.v1.1 MD14G1044500.v1.1
prunus_persica	Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1 Prupe.7G089500_v2.0.a1
pyrus_communis	pycom12g03940 pycom14g03770
rosa_chinensis	RchiOBHm_Chr3g0477391
rosa_laevigata	RLG00000023726
rosa_multiflora	Rmu_ssc0000341.1_g000030
rosa_roxburghii	Rroxscaffold_1G00008820 Rroxscaffold_3G00241160 Rroxscaffold_4G00299920 Rroxscaffold_6G00404230 Rroxscaffold_6G00404700
rosa_rugosa	Rorug03G0159900 Rorug03G0160000 Rorug03G0160100
rosa_samantha	Rh3AG210600 Rh3BG243800 Rh3CG237700 Rh3DG237400
rosa_wichuraiana	Rw3G019080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	854, 1596
AccB1I	GGYRCC	4 cut(s)	183, 670, 1037, 1620
AccB7I	CCANNNNNTGG	2 cut(s)	729, 944
AccBSI	CCGCTC	1 cut(s)	610
AccI	GTMKAC	2 cut(s)	1590, 1846
AccII	CGCG	1 cut(s)	1656
AclI	AACGTT	1 cut(s)	2796
AclWI	GGATC	7 cut(s)	33, 53, 599, 612, 1307, 2812, 2825
AcsI	RAATTY	3 cut(s)	778, 1152, 1859
AcuI	CTGAAG	4 cut(s)	50, 2216, 2730, 2882
AcvI	CACGTG	1 cut(s)	2138
AcyI	GRCGYC	4 cut(s)	184, 851, 1038, 1593
AfaI	GTAC	5 cut(s)	1451, 2025, 2516, 2583, 2629
AfeI	AGCGCT	1 cut(s)	1063
AfiI	CCNNNNNNNGG	9 cut(s)	101, 614, 729, 749, 903, 944, 1745, 2898, 2968
AflII	CTTAAG	1 cut(s)	2617
AflIII	ACRYGT	3 cut(s)	2135, 2137, 2511
AgeI	ACCGGT	1 cut(s)	673
AjnI	CCWGG	1 cut(s)	937
AleI	CACNNNNGTG	2 cut(s)	501, 1235
AloI	GAACNNNNNNTCC	2 cut(s)	1291, 1323
Alw21I	GWGCWC	2 cut(s)	1003, 2938
Alw26I	GTCTC	1 cut(s)	2126
AlwI	GGATC	7 cut(s)	33, 53, 599, 612, 1307, 2812, 2825
AlwNI	CAGNNNCTG	4 cut(s)	311, 1805, 2069, 2753
Ama87I	CYCGRG	1 cut(s)	1057
Aor51HI	AGCGCT	1 cut(s)	1063
AoxI	GGCC	4 cut(s)	208, 493, 740, 751
ApoI	RAATTY	3 cut(s)	778, 1152, 1859
AseI	ATTAAT	1 cut(s)	2895
AsiGI	ACCGGT	1 cut(s)	673
AspLEI	GCGC	6 cut(s)	186, 554, 921, 1040, 1064, 1461
AspS9I	GGNCC	5 cut(s)	209, 740, 751, 1343, 2901
AsuC2I	CCSGG	1 cut(s)	1320
AsuHPI	GGTGA	7 cut(s)	629, 688, 837, 1081, 1493, 1831, 2308
AsuNHI	GCTAGC	1 cut(s)	1064
AvaI	CYCGRG	1 cut(s)	1057
AvaII	GGWCC	2 cut(s)	1343, 2901
BaeGI	GKGCMC	1 cut(s)	1107
BamHI	GGATCC	2 cut(s)	604, 2817
BanI	GGYRCC	4 cut(s)	183, 670, 1037, 1620
BarI	GAAGNNNNNNTAC	2 cut(s)	2868, 2900
BauI	CACGAG	1 cut(s)	543
BbrPI	CACGTG	1 cut(s)	2138
BbsI	GAAGAC	4 cut(s)	995, 2419, 2440, 2883
Bbv12I	GWGCWC	2 cut(s)	1003, 2938
BceAI	ACGGC	2 cut(s)	188, 673
BcgI	CGANNNNNNTGC	4 cut(s)	28, 62, 1313, 1347
BciT130I	CCWGG	1 cut(s)	939
BciVI	GTATCC	1 cut(s)	2951
BclI	TGATCA	1 cut(s)	1432
BcnI	CCSGG	1 cut(s)	1320
BcoDI	GTCTC	1 cut(s)	2126
BfaI	CTAG	7 cut(s)	318, 519, 993, 1065, 1607, 1988, 2541
BfmI	CTRYAG	3 cut(s)	1541, 2266, 2334
BfoI	RGCGCY	4 cut(s)	187, 555, 1041, 1065
BfrI	CTTAAG	1 cut(s)	2617
BfuI	GTATCC	1 cut(s)	2951
BglII	AGATCT	2 cut(s)	1162, 2205
BmcAI	AGTACT	1 cut(s)	2629
Bme1390I	CCNGG	2 cut(s)	939, 1320
Bme18I	GGWCC	2 cut(s)	1343, 2901
BmeT110I	CYCGRG	1 cut(s)	1057
BmgT120I	GGNCC	5 cut(s)	209, 740, 751, 1343, 2901
BmrFI	CCNGG	2 cut(s)	939, 1320
BmsI	GCATC	2 cut(s)	524, 1922
BmtI	GCTAGC	1 cut(s)	1068
BpiI	GAAGAC	4 cut(s)	995, 2419, 2440, 2883
BpmI	CTGGAG	1 cut(s)	2079
Bpu10I	CCTNAGC	2 cut(s)	2645, 2682
BpuEI	CTTGAG	5 cut(s)	346, 729, 886, 1208, 2457
BpuMI	CCSGG	1 cut(s)	1320
Bsa29I	ATCGAT	1 cut(s)	295
BsaAI	YACGTR	1 cut(s)	2138
BsaBI	GATNNNNATC	3 cut(s)	240, 291, 1706
BsaHI	GRCGYC	4 cut(s)	184, 851, 1038, 1593
BsaJI	CCNNGG	6 cut(s)	723, 938, 1318, 1654, 2493, 2946
BsaWI	WCCGGW	2 cut(s)	673, 2800
BsaXI	ACNNNNNCTCC	6 cut(s)	83, 113, 163, 193, 689, 719
Bsc4I	CCNNNNNNNGG	9 cut(s)	101, 614, 729, 749, 903, 944, 1745, 2898, 2968
Bse118I	RCCGGY	4 cut(s)	143, 673, 1091, 1172
Bse1I	ACTGG	4 cut(s)	819, 1309, 1842, 2394
Bse3DI	GCAATG	5 cut(s)	680, 1411, 1702, 1929, 2418
Bse8I	GATNNNNATC	3 cut(s)	240, 291, 1706
BseBI	CCWGG	1 cut(s)	939
BseCI	ATCGAT	1 cut(s)	295
BseDI	CCNNGG	6 cut(s)	723, 938, 1318, 1654, 2493, 2946
BseJI	GATNNNNATC	3 cut(s)	240, 291, 1706
BseLI	CCNNNNNNNGG	9 cut(s)	101, 614, 729, 749, 903, 944, 1745, 2898, 2968
BseMI	GCAATG	5 cut(s)	680, 1411, 1702, 1929, 2418
BseMII	CTCAG	4 cut(s)	1493, 2076, 2638, 2696
BseNI	ACTGG	4 cut(s)	819, 1309, 1842, 2394
BseRI	GAGGAG	2 cut(s)	2165, 3001
BseSI	GKGCMC	1 cut(s)	1107
BseYI	CCCAGC	5 cut(s)	263, 451, 554, 1972, 2774
BsgI	GTGCAG	2 cut(s)	1749, 2888
Bsh1236I	CGCG	1 cut(s)	1656
BshFI	GGCC	4 cut(s)	210, 495, 742, 753
BshNI	GGYRCC	4 cut(s)	183, 670, 1037, 1620
BshTI	ACCGGT	1 cut(s)	673
BshVI	ATCGAT	1 cut(s)	295
BsiHKAI	GWGCWC	2 cut(s)	1003, 2938
BsiHKCI	CYCGRG	1 cut(s)	1057
BsiSI	CCGG	8 cut(s)	144, 674, 754, 1092, 1173, 1320, 1746, 2801
BslFI	GGGAC	3 cut(s)	590, 1356, 2700
BslI	CCNNNNNNNGG	9 cut(s)	101, 614, 729, 749, 903, 944, 1745, 2898, 2968
BsmAI	GTCTC	1 cut(s)	2126
BsmFI	GGGAC	3 cut(s)	590, 1356, 2700
BsnI	GGCC	4 cut(s)	210, 495, 742, 753
BsoBI	CYCGRG	1 cut(s)	1057
Bsp1286I	GDGCHC	3 cut(s)	1003, 1107, 2938
Bsp1407I	TGTACA	1 cut(s)	2514
Bsp19I	CCATGG	2 cut(s)	723, 2946
BspANI	GGCC	4 cut(s)	210, 495, 742, 753
BspCNI	CTCAG	4 cut(s)	1492, 2075, 2637, 2695
BspDI	ATCGAT	1 cut(s)	295
BspFNI	CGCG	1 cut(s)	1656
BspHI	TCATGA	1 cut(s)	247
BspMAI	CTGCAG	2 cut(s)	2270, 2338
BspOI	GCTAGC	1 cut(s)	1068
BspPI	GGATC	7 cut(s)	33, 53, 599, 612, 1307, 2812, 2825
BspT107I	GGYRCC	4 cut(s)	183, 670, 1037, 1620
BspTI	CTTAAG	1 cut(s)	2617
BsrBI	CCGCTC	1 cut(s)	610
BsrDI	GCAATG	5 cut(s)	680, 1411, 1702, 1929, 2418
BsrFI	RCCGGY	4 cut(s)	143, 673, 1091, 1172
BsrGI	TGTACA	1 cut(s)	2514
BsrI	ACTGG	4 cut(s)	819, 1309, 1842, 2394
BssAI	RCCGGY	4 cut(s)	143, 673, 1091, 1172
BssECI	CCNNGG	6 cut(s)	723, 938, 1318, 1654, 2493, 2946
BssNI	GRCGYC	4 cut(s)	184, 851, 1038, 1593
BssSI	CACGAG	1 cut(s)	543
BssT1I	CCWWGG	3 cut(s)	723, 2493, 2946
Bst2BI	CACGAG	1 cut(s)	543
Bst2UI	CCWGG	1 cut(s)	939
Bst4CI	ACNGT	4 cut(s)	1102, 1510, 1816, 2755
Bst6I	CTCTTC	4 cut(s)	1673, 1856, 2181, 2591
BstACI	GRCGYC	4 cut(s)	184, 851, 1038, 1593
BstAFI	CTTAAG	1 cut(s)	2617
BstAUI	TGTACA	1 cut(s)	2514
BstBAI	YACGTR	1 cut(s)	2138
BstDEI	CTNAG	7 cut(s)	1479, 1612, 1769, 2062, 2624, 2645, 2682
BstDSI	CCRYGG	3 cut(s)	723, 1654, 2946
BstFNI	CGCG	1 cut(s)	1656
BstH2I	RGCGCY	4 cut(s)	187, 555, 1041, 1065
BstHHI	GCGC	6 cut(s)	186, 554, 921, 1040, 1064, 1461
BstMAI	GTCTC	1 cut(s)	2126
BstMWI	GCNNNNNNNGC	7 cut(s)	558, 872, 875, 1061, 1919, 2705, 2942
BstNI	CCWGG	1 cut(s)	939
BstNSI	RCATGY	4 cut(s)	76, 712, 2515, 2653
BstSCI	CCNGG	2 cut(s)	937, 1318
BstSFI	CTRYAG	3 cut(s)	1541, 2266, 2334
BstSLI	GKGCMC	1 cut(s)	1107
BstUI	CGCG	1 cut(s)	1656
BstV2I	GAAGAC	4 cut(s)	995, 2419, 2440, 2883
BstX2I	RGATCY	5 cut(s)	25, 604, 1162, 2205, 2817
BstXI	CCANNNNNNTGG	2 cut(s)	503, 2389
BstYI	RGATCY	5 cut(s)	25, 604, 1162, 2205, 2817
Bsu15I	ATCGAT	1 cut(s)	295
BsuI	GTATCC	1 cut(s)	2951
BsuRI	GGCC	4 cut(s)	210, 495, 742, 753
BsuTUI	ATCGAT	1 cut(s)	295
BtgI	CCRYGG	3 cut(s)	723, 1654, 2946
BtsI	GCAGTG	5 cut(s)	634, 955, 961, 967, 2331
CaiI	CAGNNNCTG	4 cut(s)	311, 1805, 2069, 2753
CciI	TCATGA	1 cut(s)	247
CfoI	GCGC	6 cut(s)	186, 554, 921, 1040, 1064, 1461
Cfr10I	RCCGGY	4 cut(s)	143, 673, 1091, 1172
Cfr13I	GGNCC	5 cut(s)	209, 740, 751, 1343, 2901
Cfr42I	CCGCGG	1 cut(s)	1657
ClaI	ATCGAT	1 cut(s)	295
Csp6I	GTAC	5 cut(s)	1450, 2024, 2515, 2582, 2628
CspAI	ACCGGT	1 cut(s)	673
CspCI	CAANNNNNGTGG	2 cut(s)	1393, 1428
CviQI	GTAC	5 cut(s)	1450, 2024, 2515, 2582, 2628
DdeI	CTNAG	7 cut(s)	1479, 1612, 1769, 2062, 2624, 2645, 2682
DinI	GGCGCC	2 cut(s)	185, 1039
Eam1104I	CTCTTC	4 cut(s)	1673, 1856, 2181, 2591
EarI	CTCTTC	4 cut(s)	1673, 1856, 2181, 2591
Eco130I	CCWWGG	3 cut(s)	723, 2493, 2946
Eco47I	GGWCC	2 cut(s)	1343, 2901
Eco47III	AGCGCT	1 cut(s)	1063
Eco57I	CTGAAG	4 cut(s)	50, 2216, 2730, 2882
Eco72I	CACGTG	1 cut(s)	2138
Eco88I	CYCGRG	1 cut(s)	1057
EcoRII	CCWGG	1 cut(s)	937
EcoT14I	CCWWGG	3 cut(s)	723, 2493, 2946
EcoT22I	ATGCAT	1 cut(s)	2672
EgeI	GGCGCC	2 cut(s)	185, 1039
EheI	GGCGCC	2 cut(s)	185, 1039
ErhI	CCWWGG	3 cut(s)	723, 2493, 2946
FalI	AAGNNNNNCTT	2 cut(s)	1274, 1306
FaqI	GGGAC	3 cut(s)	590, 1356, 2700
FauI	CCCGC	2 cut(s)	1114, 1649
FauNDI	CATATG	1 cut(s)	1528
FbaI	TGATCA	1 cut(s)	1432
FblI	GTMKAC	2 cut(s)	1590, 1846
FspBI	CTAG	7 cut(s)	318, 519, 993, 1065, 1607, 1988, 2541
GlaI	GCGC	6 cut(s)	185, 553, 920, 1039, 1063, 1460
GsaI	CCCAGC	5 cut(s)	267, 455, 558, 1976, 2778
GsuI	CTGGAG	1 cut(s)	2079
HaeII	RGCGCY	4 cut(s)	187, 555, 1041, 1065
HaeIII	GGCC	4 cut(s)	210, 495, 742, 753
HapII	CCGG	8 cut(s)	144, 674, 754, 1092, 1173, 1320, 1746, 2801
HhaI	GCGC	6 cut(s)	186, 554, 921, 1040, 1064, 1461
Hin1I	GRCGYC	4 cut(s)	184, 851, 1038, 1593
Hin6I	GCGC	6 cut(s)	184, 552, 919, 1038, 1062, 1459
HinP1I	GCGC	6 cut(s)	184, 552, 919, 1038, 1062, 1459
HincII	GTYRAC	2 cut(s)	402, 1591
HindII	GTYRAC	2 cut(s)	402, 1591
HindIII	AAGCTT	4 cut(s)	1891, 2162, 2852, 2996
HpaII	CCGG	8 cut(s)	144, 674, 754, 1092, 1173, 1320, 1746, 2801
HphI	GGTGA	7 cut(s)	629, 688, 837, 1081, 1493, 1831, 2308
Hpy166II	GTNNAC	7 cut(s)	402, 649, 1230, 1315, 1591, 1847, 2351
Hpy8I	GTNNAC	7 cut(s)	402, 649, 1230, 1315, 1591, 1847, 2351
Hpy99I	CGWCG	4 cut(s)	694, 853, 1145, 1595
HpyAV	CCTTC	9 cut(s)	154, 162, 847, 1096, 1276, 1725, 1730, 2722, 2857
HpyCH4III	ACNGT	4 cut(s)	1102, 1510, 1816, 2755
HpyCH4IV	ACGT	4 cut(s)	851, 1593, 2137, 2796
HpyF10VI	GCNNNNNNNGC	7 cut(s)	558, 872, 875, 1061, 1919, 2705, 2942
HpyF3I	CTNAG	7 cut(s)	1479, 1612, 1769, 2062, 2624, 2645, 2682
HpySE526I	ACGT	4 cut(s)	851, 1593, 2137, 2796
Hsp92I	GRCGYC	4 cut(s)	184, 851, 1038, 1593
HspAI	GCGC	6 cut(s)	184, 552, 919, 1038, 1062, 1459
KasI	GGCGCC	2 cut(s)	183, 1037
KroI	GCCGGC	2 cut(s)	143, 1172
KroNI	GCCGGC	2 cut(s)	145, 1174
Ksp22I	TGATCA	1 cut(s)	1432
KspI	CCGCGG	1 cut(s)	1657
LmnI	GCTCC	6 cut(s)	91, 558, 929, 2231, 2705, 3008
LweI	GCATC	2 cut(s)	524, 1922
MaeI	CTAG	7 cut(s)	318, 519, 993, 1065, 1607, 1988, 2541
MaeII	ACGT	4 cut(s)	851, 1593, 2137, 2796
MaeIII	GTNAC	8 cut(s)	458, 676, 843, 1237, 1474, 1785, 1819, 2749
MbiI	CCGCTC	1 cut(s)	610
MflI	RGATCY	5 cut(s)	25, 604, 1162, 2205, 2817
MhlI	GDGCHC	3 cut(s)	1003, 1107, 2938
Mly113I	GGCGCC	2 cut(s)	184, 1038
MlyI	GAGTC	7 cut(s)	13, 302, 455, 830, 1118, 1471, 1842
MmeI	TCCRAC	1 cut(s)	2016
Mph1103I	ATGCAT	1 cut(s)	2672
MroNI	GCCGGC	2 cut(s)	143, 1172
MslI	CAYNNNNRTG	4 cut(s)	246, 501, 520, 1235
MspCI	CTTAAG	1 cut(s)	2617
MspI	CCGG	8 cut(s)	144, 674, 754, 1092, 1173, 1320, 1746, 2801
MspR9I	CCNGG	2 cut(s)	939, 1320
MvaI	CCWGG	1 cut(s)	939
MvnI	CGCG	1 cut(s)	1656
MwoI	GCNNNNNNNGC	7 cut(s)	558, 872, 875, 1061, 1919, 2705, 2942
NaeI	GCCGGC	2 cut(s)	145, 1174
NarI	GGCGCC	2 cut(s)	184, 1038
NciI	CCSGG	1 cut(s)	1320
NcoI	CCATGG	2 cut(s)	723, 2946
NdeI	CATATG	1 cut(s)	1528
NgoMIV	GCCGGC	2 cut(s)	143, 1172
NheI	GCTAGC	1 cut(s)	1064
NmuCI	GTSAC	6 cut(s)	458, 676, 843, 1237, 1474, 1819
NsiI	ATGCAT	1 cut(s)	2672
NspI	RCATGY	4 cut(s)	76, 712, 2515, 2653
OliI	CACNNNNGTG	2 cut(s)	501, 1235
PaeI	GCATGC	3 cut(s)	76, 712, 2653
PaeR7I	CTCGAG	1 cut(s)	1057
PagI	TCATGA	1 cut(s)	247
PciI	ACATGT	1 cut(s)	2511
PcsI	WCGNNNNNNNCGW	1 cut(s)	2793
PdiI	GCCGGC	2 cut(s)	145, 1174
PfeI	GAWTC	6 cut(s)	136, 700, 1470, 1754, 1873, 2313
PflMI	CCANNNNNTGG	2 cut(s)	729, 944
PinAI	ACCGGT	1 cut(s)	673
PleI	GAGTC	7 cut(s)	12, 302, 455, 829, 1118, 1471, 1842
PluTI	GGCGCC	2 cut(s)	187, 1041
PmaCI	CACGTG	1 cut(s)	2138
PmlI	CACGTG	1 cut(s)	2138
PpsI	GAGTC	7 cut(s)	12, 302, 455, 829, 1118, 1471, 1842
Ppu21I	YACGTR	1 cut(s)	2138
PscI	ACATGT	1 cut(s)	2511
PshBI	ATTAAT	1 cut(s)	2895
Psp1406I	AACGTT	1 cut(s)	2796
Psp6I	CCWGG	1 cut(s)	937
PspCI	CACGTG	1 cut(s)	2138
PspFI	CCCAGC	5 cut(s)	263, 451, 554, 1972, 2774
PspGI	CCWGG	1 cut(s)	937
PspPI	GGNCC	5 cut(s)	209, 740, 751, 1343, 2901
PspXI	VCTCGAGB	1 cut(s)	1057
PstI	CTGCAG	2 cut(s)	2270, 2338
PstNI	CAGNNNCTG	4 cut(s)	311, 1805, 2069, 2753
PsuI	RGATCY	5 cut(s)	25, 604, 1162, 2205, 2817
PvuII	CAGCTG	3 cut(s)	833, 1546, 2304
RsaI	GTAC	5 cut(s)	1451, 2025, 2516, 2583, 2629
RsaNI	GTAC	5 cut(s)	1450, 2024, 2515, 2582, 2628
RseI	CAYNNNNRTG	4 cut(s)	246, 501, 520, 1235
SacII	CCGCGG	1 cut(s)	1657
SalI	GTCGAC	1 cut(s)	1589
Sau96I	GGNCC	5 cut(s)	209, 740, 751, 1343, 2901
ScaI	AGTACT	1 cut(s)	2629
SchI	GAGTC	7 cut(s)	13, 302, 455, 830, 1118, 1471, 1842
ScrFI	CCNGG	2 cut(s)	939, 1320
SduI	GDGCHC	3 cut(s)	1003, 1107, 2938
SfaNI	GCATC	2 cut(s)	524, 1922
SfcI	CTRYAG	3 cut(s)	1541, 2266, 2334
SfoI	GGCGCC	2 cut(s)	185, 1039
Sfr274I	CTCGAG	1 cut(s)	1057
Sfr303I	CCGCGG	1 cut(s)	1657
SgrAI	CRCCGGYG	1 cut(s)	673
SgrBI	CCGCGG	1 cut(s)	1657
SinI	GGWCC	2 cut(s)	1343, 2901
SlaI	CTCGAG	1 cut(s)	1057
SmiMI	CAYNNNNRTG	4 cut(s)	246, 501, 520, 1235
SmlI	CTYRAG	7 cut(s)	325, 744, 901, 1057, 1223, 2472, 2617
SmoI	CTYRAG	7 cut(s)	325, 744, 901, 1057, 1223, 2472, 2617
SphI	GCATGC	3 cut(s)	76, 712, 2653
SspDI	GGCGCC	2 cut(s)	183, 1037
SspI	AATATT	1 cut(s)	736
SspMI	CTAG	7 cut(s)	318, 519, 993, 1065, 1607, 1988, 2541
StyD4I	CCNGG	2 cut(s)	937, 1318
StyI	CCWWGG	3 cut(s)	723, 2493, 2946
TaaI	ACNGT	4 cut(s)	1102, 1510, 1816, 2755
TaiI	ACGT	4 cut(s)	854, 1596, 2140, 2799
TaqI	TCGA	5 cut(s)	79, 295, 692, 1058, 1590
TaqII	GACCGA	1 cut(s)	1214
TatI	WGTACW	3 cut(s)	2514, 2581, 2627
TauI	GCSGC	9 cut(s)	16, 97, 432, 671, 866, 878, 888, 1038, 1043
TfiI	GAWTC	6 cut(s)	136, 700, 1470, 1754, 1873, 2313
TseFI	GTSAC	6 cut(s)	458, 676, 843, 1237, 1474, 1819
Tsp45I	GTSAC	6 cut(s)	458, 676, 843, 1237, 1474, 1819
TspGWI	ACGGA	3 cut(s)	180, 2016, 2299
Van91I	CCANNNNNTGG	2 cut(s)	729, 944
Vha464I	CTTAAG	1 cut(s)	2617
VpaK11BI	GGWCC	2 cut(s)	1343, 2901
VspI	ATTAAT	1 cut(s)	2895
XapI	RAATTY	3 cut(s)	778, 1152, 1859
XceI	RCATGY	4 cut(s)	76, 712, 2515, 2653
XhoI	CTCGAG	1 cut(s)	1057
XmiI	GTMKAC	2 cut(s)	1590, 1846
XspI	CTAG	7 cut(s)	318, 519, 993, 1065, 1607, 1988, 2541
ZraI	GACGTC	2 cut(s)	852, 1594
ZrmI	AGTACT	1 cut(s)	2629
Zsp2I	ATGCAT	1 cut(s)	2672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.