Pectate lyase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53190 |
| fragaria_vesca | FvH4_6g16670 FvH4_6g16670 |
| malus_domestica | MD04G1089800.v1.1 MD12G1108300.v1.1 |
| prunus_persica | Prupe.4G097600_v2.0.a1 Prupe.4G097900_v2.0.a1 Prupe.7G126700_v2.0.a1 |
| pyrus_communis | pycom04g08480 pycom04g08490 pycom12g10830 pycom12g10840 pycom12g10850 |
| rosa_chinensis | RchiOBHm_Chr3g0470631 |
| rosa_laevigata | RLG00000024252 |
| rosa_multiflora | Rmu_sc0002115.1_g000021 |
| rosa_roxburghii | Rroxscaffold_6G00410670 |
| rosa_rugosa | Rorug03G0110700 Rorug03G0110800 |
| rosa_samantha | Rh3AG160800 Rh3BG185300 Rh3CG175700 Rh3DG189400 |
| rosa_wichuraiana | Rw3G015200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 23 |
| AjnI | CCWGG | 2 cut(s) | 85, 275 |
| AluBI | AGCT | 1 cut(s) | 190 |
| AluI | AGCT | 1 cut(s) | 190 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 15 |
| ApeKI | GCWGC | 1 cut(s) | 166 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 114 |
| AsuHPI | GGTGA | 1 cut(s) | 31 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 102, 134 |
| BbvI | GCAGC | 1 cut(s) | 153 |
| BciT130I | CCWGG | 2 cut(s) | 87, 277 |
| BfuAI | ACCTGC | 1 cut(s) | 23 |
| BisI | GCNGC | 1 cut(s) | 167 |
| BlsI | GCNGC | 1 cut(s) | 168 |
| Bme1390I | CCNGG | 2 cut(s) | 87, 277 |
| BmrFI | CCNGG | 2 cut(s) | 87, 277 |
| BmsI | GCATC | 1 cut(s) | 103 |
| Bsa29I | ATCGAT | 1 cut(s) | 244 |
| BsaAI | YACGTR | 1 cut(s) | 201 |
| BsaJI | CCNNGG | 1 cut(s) | 85 |
| BsaWI | WCCGGW | 1 cut(s) | 209 |
| BseBI | CCWGG | 2 cut(s) | 87, 277 |
| BseCI | ATCGAT | 1 cut(s) | 244 |
| BseDI | CCNNGG | 1 cut(s) | 85 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseMII | CTCAG | 1 cut(s) | 263 |
| BseXI | GCAGC | 1 cut(s) | 153 |
| BshVI | ATCGAT | 1 cut(s) | 244 |
| BsiSI | CCGG | 1 cut(s) | 210 |
| BsmI | GAATGC | 1 cut(s) | 65 |
| Bsp143I | GATC | 3 cut(s) | 3, 241, 245 |
| BspCNI | CTCAG | 1 cut(s) | 262 |
| BspDI | ATCGAT | 1 cut(s) | 244 |
| BspMI | ACCTGC | 1 cut(s) | 23 |
| BssECI | CCNNGG | 1 cut(s) | 85 |
| BssMI | GATC | 3 cut(s) | 3, 241, 245 |
| Bst2UI | CCWGG | 2 cut(s) | 87, 277 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 166, 286 |
| BstBAI | YACGTR | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 249 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstKTI | GATC | 3 cut(s) | 6, 244, 248 |
| BstMBI | GATC | 3 cut(s) | 3, 241, 245 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 149, 166, 286 |
| BstNI | CCWGG | 2 cut(s) | 87, 277 |
| BstSCI | CCNGG | 2 cut(s) | 85, 275 |
| BstV1I | GCAGC | 1 cut(s) | 153 |
| Bsu15I | ATCGAT | 1 cut(s) | 244 |
| BsuTUI | ATCGAT | 1 cut(s) | 244 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| BtsI | GCAGTG | 1 cut(s) | 60 |
| BtsIMutI | CAGTG | 1 cut(s) | 60 |
| BveI | ACCTGC | 1 cut(s) | 23 |
| CaiI | CAGNNNCTG | 1 cut(s) | 15 |
| ClaI | ATCGAT | 1 cut(s) | 244 |
| CviJI | RGCY | 3 cut(s) | 190, 258, 275 |
| CviKI_1 | RGCY | 3 cut(s) | 190, 258, 275 |
| DdeI | CTNAG | 1 cut(s) | 249 |
| DpnI | GATC | 3 cut(s) | 5, 243, 247 |
| DpnII | GATC | 3 cut(s) | 3, 241, 245 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| EcoRII | CCWGG | 2 cut(s) | 85, 275 |
| Fnu4HI | GCNGC | 1 cut(s) | 167 |
| FokI | GGATG | 1 cut(s) | 81 |
| Fsp4HI | GCNGC | 1 cut(s) | 167 |
| GluI | GCNGC | 1 cut(s) | 167 |
| HapII | CCGG | 1 cut(s) | 210 |
| HinfI | GANTC | 1 cut(s) | 194 |
| HpaII | CCGG | 1 cut(s) | 210 |
| HphI | GGTGA | 1 cut(s) | 31 |
| Hpy188I | TCNGA | 1 cut(s) | 252 |
| HpyAV | CCTTC | 2 cut(s) | 127, 150 |
| HpyCH4IV | ACGT | 1 cut(s) | 200 |
| HpyCH4V | TGCA | 4 cut(s) | 18, 65, 169, 289 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 149, 166, 286 |
| HpyF3I | CTNAG | 1 cut(s) | 249 |
| HpySE526I | ACGT | 1 cut(s) | 200 |
| Kzo9I | GATC | 3 cut(s) | 3, 241, 245 |
| Lsp1109I | GCAGC | 1 cut(s) | 153 |
| LweI | GCATC | 1 cut(s) | 103 |
| MaeII | ACGT | 1 cut(s) | 200 |
| MalI | GATC | 3 cut(s) | 5, 243, 247 |
| MboI | GATC | 3 cut(s) | 3, 241, 245 |
| MboII | GAAGA | 1 cut(s) | 26 |
| MnlI | CCTC | 4 cut(s) | 52, 63, 80, 86 |
| MroXI | GAANNNNTTC | 1 cut(s) | 114 |
| MseI | TTAA | 2 cut(s) | 126, 138 |
| MspA1I | CMGCKG | 1 cut(s) | 190 |
| MspI | CCGG | 1 cut(s) | 210 |
| MspR9I | CCNGG | 2 cut(s) | 87, 277 |
| Mva1269I | GAATGC | 1 cut(s) | 65 |
| MvaI | CCWGG | 2 cut(s) | 87, 277 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 149, 166, 286 |
| NdeII | GATC | 3 cut(s) | 3, 241, 245 |
| PctI | GAATGC | 1 cut(s) | 65 |
| PdmI | GAANNNNTTC | 1 cut(s) | 114 |
| PfeI | GAWTC | 1 cut(s) | 194 |
| PkrI | GCNGC | 1 cut(s) | 168 |
| Ppu21I | YACGTR | 1 cut(s) | 201 |
| Psp6I | CCWGG | 2 cut(s) | 85, 275 |
| PspGI | CCWGG | 2 cut(s) | 85, 275 |
| PstNI | CAGNNNCTG | 1 cut(s) | 15 |
| PvuII | CAGCTG | 1 cut(s) | 190 |
| SaqAI | TTAA | 2 cut(s) | 126, 138 |
| SatI | GCNGC | 1 cut(s) | 167 |
| Sau3AI | GATC | 3 cut(s) | 3, 241, 245 |
| ScrFI | CCNGG | 2 cut(s) | 87, 277 |
| SetI | ASST | 6 cut(s) | 17, 44, 78, 138, 192, 203 |
| SfaNI | GCATC | 1 cut(s) | 103 |
| StyD4I | CCNGG | 2 cut(s) | 85, 275 |
| TaiI | ACGT | 1 cut(s) | 203 |
| TaqI | TCGA | 1 cut(s) | 244 |
| TfiI | GAWTC | 1 cut(s) | 194 |
| Tru1I | TTAA | 2 cut(s) | 126, 138 |
| Tru9I | TTAA | 2 cut(s) | 126, 138 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TseI | GCWGC | 1 cut(s) | 166 |
| TspDTI | ATGAA | 1 cut(s) | 123 |
| TspRI | CASTG | 1 cut(s) | 67 |
| XmnI | GAANNNNTTC | 1 cut(s) | 114 |