Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0007639

Physical Location & Seq

Genomic Coordinates Reverse (-)

8938928 .. 8943169

Gene Structure 4242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0110800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGGCCATGGAGATCACTCAGTATCTATTGGCAGCTCAATCAGCAGATGCAAGAGTTCGTACTGAAGCGGAGTCTAATCTGAGGCAATTTCAAGAGCAAAACCTTCCTGCTTTCCTTCTGTCATTGTCAGTTGAGCTAGCCAACAGTGAAAAGCCAATTGAATCCCGTAGGTTGGCTGGTATTGTTCTGAAGAACTCCTTGGATGCTAAAGATGCTGTTACAAAGGAACGTCTTGCTCAGCAATGGATGGCAGTTGATATTGCTTTTAAATCCCAAATCAAGGAAATGCTCTTACTGACACTTGCGTCATCTGTGCGAGAGGCAAGGCACACCTCTGCTCAAGTTCTTGCCAAAGTTGCTTCTATCGATATTCCTCAGAAACAGTGGCCTGAGCTAATTGCATATTTGCTTAATAACATGACTAAGGGAGACAGCTCTGCTGATTTGAAACAGTCAACCTTGGAAACTCTTGGTTATGTATGCGAGGAGATATCCCATCATGATCTTGGGCAAGACGAGGTGAATTCTATTCTTACAGCTGTTGTACAAGGAATGAACCTTGCTGAGAACAGTCCTGAAGTCCGTCTTGCTGCCACAAAGGCTTTATATAATGCCTTGGAGTTTGCTGAGACAAACTTTCAAAACGAGATGGAACGAACTTACATCATGAAGATGGTCTGTGAAACAGCCTTGTCGAAAGAGGTAGAGATTAGGCAGGCGGCTTTTGAGTGCCTTGCTTCAGTTGCTTCTACTTACTATGACGTGCTTGAGGCATACATGCAGGCTCTCTTTGAGCTTACTTCAAATGCTGTAAAGGGGGATGTAGAGGCTGTTGCCCTCCAAGCAATTGAGTTTTGGAGCTCCATTTGTGATGAAGAAATAGAATTGCAAGAGTATGAGAGTGCCGATACTGGGGACTCTGGGCATCCACATTCACGTTTTATAGAAAAATCTCTATCATATCTAGTTCCAATGCTGCTGGAAACTTTGCTGAAGCAGGAAGAAGATGTAGACCAGGATGACAGCATTTGGAATATCTCAATGGCTGGTGGGACGTGCCTAGGACTTGTTGCACGAACTGTTGGTGATGCAATTCTTCCCCTTGTGATGCCATTTGTGGAGGCTAACATAGCGCAACCAGATTGGCGTTGTCAGGAAGCAGCTACTTTGGCATTTGGCTCAATCCTTGAAGGCCCAACCGTTGAGAAGCTATCAGTACTGGTCCATTCAGGTTTAGATTTCCTATTGAGGTTATTGAAAGATGGAAACAACCATGTCAAAGACACTACTGCCTGGACTATCGGCCGTATATTTGAGTACCTGCACAGTCCTGCTGGTGGCTTTTCTGTTATTTCTTCAGATAACCTTCCAAAAGTAGTGGAAGTATTGTTGGAAAGCATTAAGGATGCTCCAAATGTTGCTGCTAAGGTTTGTTGGGCTATTTATAAGCTTGCCGAGGGGTACGAGGATGCTGGAAGGCACTCATCACTTTTTACGCCTTATATCCATAGGATCATTGAAAGTCTTCTTTTTGCTGCTAGTCGTACAGATGTAGATGATTCTAGATTGAGGTCTGCTGCCTATGAATCATTGAACGAGGTAGTGAGGTGTTCTAATATTAAAGAAACATCACAGATTATACGAGAACTACTACCTGTGATTTTGCAGAAGTTGAGTCAGACTCTAGAGCTTCAGATTGTATCATCAGATGACAAGGAAAAGCAAGCAGACTTGCAGGCTTCTCTTTGTGGTGTTCTCCAGGTTATAATCCAGAAAGTTAGCAGTGCTGATGATTTGGAAACCAGGTCCATTATATTGACACAGGCAGACCAGATAATGTTTTTGTTTCTTAATGTCTTTGCTTGCCGAAGTTCTACGGTGCACGAGGAAGCAATGCTTGCTATTGGTGCCCTTGCTCATGCTACTGGATCTGAGTTTGGCAAGTACCTTCCTGACTTCTACAAGTATTTAGAGATGGGGTTGCAAAATTTCGAGGAATATCAAGTCTGTTCTATTACAGTTGGTGTAGTTGGTGATGTTGTTCGTGCCTTGAATGACAAGGTATTACCATATTGTGATGGGATTATGCAACTTCTGTTGGCAAATCTTTCTAGTGAAGCACTCGACCGGTCTGTCAAGCCTCCCATATTCTCTGTCTTTAGCGACATAGCTCTCTCAATAGAGGAGAATTTTGAGAAGTATGTTCCCTATGCAGTGCCAATGATGCAGAGAGCTGCAGAGCTTTGTGCTCAGATGGACTCCAATGATGATGAGCTAATGGAATACGGTAACCAGCTTAAGTGTAGCATATTTGAAGCTTATTCTGGTATACTTCAGGGATTTAAGAATTCAAAGTCTGAGGTCATGTTGCCCTATGCACCACATCTCTGGCAGTTCATCGAATTGGTTTTGAGGGAGCAACACAGGGATGTCCAGCTGACAAAAGCCTTGGCTGCTGTGATGGGGGACCTTGCAGATGTTCTTGGCACAAACACAAAGGCACTGTTTGGGGACCTGAAAGCCTGTGCAAACTTTTTGGGTGAGTGTCTTGGATCTGATGATGATGACCTGAAGAAAACCGCTACTTGGACTCAGGATAGGATTAGGAGCATCCTTGTTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00040 ko02024 map00040 map02024

Pfam Domains

Protein Families

Pec_lyase_C

Protein Analysis

874

Amino Acids

96.96

Weight (kDa)

4.64

Isoelectric Point (pI)

41.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	23 - 102	7.1e-10	Importin-beta N-terminal domain
TPR_IPO5	PF25780	107 - 266	9.6e-10	IPO5-like, TPR repeats
HEAT_EZ	PF13513	382 - 437	1.1e-10	HEAT-like repeat
TPR_IMB1	PF25574	459 - 830	2.2e-101	Importin subunit beta-1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007639)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53190
fragaria_vesca	FvH4_6g16670 FvH4_6g16670
malus_domestica	MD04G1089800.v1.1 MD12G1108300.v1.1
prunus_persica	Prupe.4G097600_v2.0.a1 Prupe.4G097900_v2.0.a1 Prupe.7G126700_v2.0.a1
pyrus_communis	pycom04g08480 pycom04g08490 pycom12g10830 pycom12g10840 pycom12g10850
rosa_chinensis	RchiOBHm_Chr3g0470631
rosa_laevigata	RLG00000024252
rosa_multiflora	Rmu_sc0002115.1_g000021
rosa_roxburghii	Rroxscaffold_6G00410670
rosa_rugosa	Rorug03G0110700 Rorug03G0110800
rosa_samantha	Rh3AG160800 Rh3BG185300 Rh3CG175700 Rh3DG189400
rosa_wichuraiana	Rw3G015200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1446, 1766
AasI	GACNNNNNNGTC	2 cut(s)	304, 2132
Acc36I	ACCTGC	1 cut(s)	1329
AccB1I	GGYRCC	1 cut(s)	1907
AccI	GTMKAC	2 cut(s)	1011, 2329
AciI	CCGC	3 cut(s)	68, 719, 2580
AclWI	GGATC	3 cut(s)	1520, 1936, 2560
AcoI	YGGCCR	2 cut(s)	3, 1303
AcsI	RAATTY	4 cut(s)	523, 1987, 2188, 2347
AcuI	CTGAAG	9 cut(s)	84, 209, 597, 723, 1013, 1341, 1676, 2318, 2591
AfaI	GTAC	7 cut(s)	61, 546, 1218, 1319, 1463, 1546, 1946
AfiI	CCNNNNNNNGG	5 cut(s)	172, 280, 912, 1337, 2586
AflII	CTTAAG	1 cut(s)	2297
AgeI	ACCGGT	1 cut(s)	2127
AjiI	CACGTC	2 cut(s)	763, 1056
AjnI	CCWGG	4 cut(s)	1014, 1292, 1758, 1802
AjuI	GAANNNNNNNTTGG	2 cut(s)	182, 214
Alw21I	GWGCWC	3 cut(s)	863, 1884, 2251
Alw26I	GTCTC	2 cut(s)	423, 623
Alw44I	GTGCAC	1 cut(s)	1880
AlwI	GGATC	3 cut(s)	1520, 1936, 2560
AoxI	GGCC	4 cut(s)	3, 386, 1192, 1303
ApaLI	GTGCAC	1 cut(s)	1880
ApeKI	GCWGC	9 cut(s)	32, 590, 976, 1160, 1421, 1535, 1577, 2234, 2453
ApoI	RAATTY	4 cut(s)	523, 1987, 2188, 2347
AsiGI	ACCGGT	1 cut(s)	2127
Asp700I	GAANNNNTTC	1 cut(s)	1524
AspA2I	CCTAGG	1 cut(s)	1060
AspLEI	GCGC	1 cut(s)	1135
AspS9I	GGNCC	5 cut(s)	1193, 1222, 1806, 2467, 2512
AsuHPI	GGTGA	4 cut(s)	532, 1097, 2045, 2552
AsuNHI	GCTAGC	1 cut(s)	136
AvaII	GGWCC	4 cut(s)	1222, 1806, 2467, 2512
AvrII	CCTAGG	1 cut(s)	1060
BaeGI	GKGCMC	2 cut(s)	1884, 1912
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	1907
BanII	GRGCYC	1 cut(s)	863
BauI	CACGAG	1 cut(s)	1883
BbsI	GAAGAC	1 cut(s)	1517
Bbv12I	GWGCWC	3 cut(s)	863, 1884, 2251
BbvI	GCAGC	9 cut(s)	44, 577, 963, 1172, 1408, 1522, 1564, 2221, 2440
BccI	CCATC	9 cut(s)	241, 504, 643, 667, 1256, 1969, 2072, 2248, 2455
BceAI	ACGGC	1 cut(s)	1290
BciT130I	CCWGG	4 cut(s)	1016, 1294, 1760, 1804
BcoDI	GTCTC	2 cut(s)	423, 623
BfaI	CTAG	7 cut(s)	137, 965, 1061, 1539, 1563, 1685, 2112
BfmI	CTRYAG	1 cut(s)	2235
BfrI	CTTAAG	1 cut(s)	2297
BfuAI	ACCTGC	1 cut(s)	1329
BglI	GCCNNNNNGGC	1 cut(s)	599
BlnI	CCTAGG	1 cut(s)	1060
BlpI	GCTNAGC	1 cut(s)	237
BmcAI	AGTACT	1 cut(s)	1218
Bme1390I	CCNGG	4 cut(s)	1016, 1294, 1760, 1804
Bme18I	GGWCC	4 cut(s)	1222, 1806, 2467, 2512
BmgBI	CACGTC	2 cut(s)	763, 1056
BmgT120I	GGNCC	5 cut(s)	1193, 1222, 1806, 2467, 2512
BmiI	GGNNCC	3 cut(s)	1909, 2468, 2513
BmrFI	CCNGG	4 cut(s)	1016, 1294, 1760, 1804
BmrI	ACTGGG	1 cut(s)	921
BmtI	GCTAGC	1 cut(s)	140
BmuI	ACTGGG	1 cut(s)	921
BpiI	GAAGAC	1 cut(s)	1517
BplI	GAGNNNNNCTC	2 cut(s)	1666, 1698
BpmI	CTGGAG	1 cut(s)	1742
Bpu10I	CCTNAGC	2 cut(s)	390, 1425
Bpu1102I	GCTNAGC	1 cut(s)	237
BpuEI	CTTGAG	2 cut(s)	324, 788
Bsa29I	ATCGAT	1 cut(s)	366
BsaJI	CCNNGG	7 cut(s)	6, 198, 459, 615, 1060, 1455, 2448
BsaWI	WCCGGW	1 cut(s)	2127
Bsc4I	CCNNNNNNNGG	5 cut(s)	172, 280, 912, 1337, 2586
Bse118I	RCCGGY	1 cut(s)	2127
Bse1I	ACTGG	3 cut(s)	916, 1224, 1930
Bse3DI	GCAATG	2 cut(s)	248, 1899
BseBI	CCWGG	4 cut(s)	1016, 1294, 1760, 1804
BseCI	ATCGAT	1 cut(s)	366
BseDI	CCNNGG	7 cut(s)	6, 198, 459, 615, 1060, 1455, 2448
BseGI	GGATG	9 cut(s)	208, 252, 826, 925, 1024, 1411, 1474, 2434, 2610
BseLI	CCNNNNNNNGG	5 cut(s)	172, 280, 912, 1337, 2586
BseMI	GCAATG	2 cut(s)	248, 1899
BseNI	ACTGG	3 cut(s)	916, 1224, 1930
BseRI	GAGGAG	2 cut(s)	500, 2198
BseSI	GKGCMC	2 cut(s)	1884, 1912
BseX3I	CGGCCG	1 cut(s)	1303
BseXI	GCAGC	9 cut(s)	44, 577, 963, 1172, 1408, 1522, 1564, 2221, 2440
BsgI	GTGCAG	1 cut(s)	1307
Bsh1285I	CGRYCG	2 cut(s)	1306, 2128
BshFI	GGCC	4 cut(s)	5, 388, 1194, 1305
BshNI	GGYRCC	1 cut(s)	1907
BshTI	ACCGGT	1 cut(s)	2127
BshVI	ATCGAT	1 cut(s)	366
BsiEI	CGRYCG	2 cut(s)	1306, 2128
BsiHKAI	GWGCWC	3 cut(s)	863, 1884, 2251
BsiSI	CCGG	1 cut(s)	2128
BslFI	GGGAC	4 cut(s)	929, 1066, 2480, 2525
BslI	CCNNNNNNNGG	5 cut(s)	172, 280, 912, 1337, 2586
BsmAI	GTCTC	2 cut(s)	423, 623
BsmFI	GGGAC	4 cut(s)	929, 1066, 2480, 2525
BsnI	GGCC	4 cut(s)	5, 388, 1194, 1305
Bsp1286I	GDGCHC	4 cut(s)	863, 1884, 1912, 2251
Bsp1407I	TGTACA	1 cut(s)	544
Bsp143I	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
Bsp1720I	GCTNAGC	1 cut(s)	237
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	3 cut(s)	68, 719, 2580
BspANI	GGCC	4 cut(s)	5, 388, 1194, 1305
BspDI	ATCGAT	1 cut(s)	366
BspHI	TCATGA	3 cut(s)	499, 666, 2621
BspLI	GGNNCC	3 cut(s)	1909, 2468, 2513
BspMAI	CTGCAG	1 cut(s)	2239
BspMI	ACCTGC	1 cut(s)	1329
BspOI	GCTAGC	1 cut(s)	140
BspPI	GGATC	3 cut(s)	1520, 1936, 2560
BspT107I	GGYRCC	1 cut(s)	1907
BspTI	CTTAAG	1 cut(s)	2297
BsrDI	GCAATG	2 cut(s)	248, 1899
BsrFI	RCCGGY	1 cut(s)	2127
BsrGI	TGTACA	1 cut(s)	544
BsrI	ACTGG	3 cut(s)	916, 1224, 1930
BssAI	RCCGGY	1 cut(s)	2127
BssECI	CCNNGG	7 cut(s)	6, 198, 459, 615, 1060, 1455, 2448
BssMI	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
BssNAI	GTATAC	1 cut(s)	2330
BssSI	CACGAG	1 cut(s)	1883
BssT1I	CCWWGG	6 cut(s)	6, 198, 459, 615, 1060, 2448
Bst1107I	GTATAC	1 cut(s)	2330
Bst2BI	CACGAG	1 cut(s)	1883
Bst2UI	CCWGG	4 cut(s)	1016, 1294, 1760, 1804
BstAFI	CTTAAG	1 cut(s)	2297
BstAPI	GCANNNNNTGC	1 cut(s)	1898
BstAUI	TGTACA	1 cut(s)	544
BstC8I	GCNNGC	8 cut(s)	138, 717, 783, 1452, 1725, 1737, 1864, 1899
BstDSI	CCRYGG	1 cut(s)	6
BstEII	GGTNACC	1 cut(s)	2288
BstF5I	GGATG	9 cut(s)	208, 252, 826, 925, 1024, 1411, 1474, 2434, 2610
BstHHI	GCGC	1 cut(s)	1135
BstKTI	GATC	5 cut(s)	15, 505, 1515, 1931, 2555
BstMAI	GTCTC	2 cut(s)	423, 623
BstMBI	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
BstMCI	CGRYCG	2 cut(s)	1306, 2128
BstNI	CCWGG	4 cut(s)	1016, 1294, 1760, 1804
BstNSI	RCATGY	1 cut(s)	781
BstPI	GGTNACC	1 cut(s)	2288
BstSCI	CCNGG	4 cut(s)	1014, 1292, 1758, 1802
BstSFI	CTRYAG	1 cut(s)	2235
BstSLI	GKGCMC	2 cut(s)	1884, 1912
BstV1I	GCAGC	9 cut(s)	44, 577, 963, 1172, 1408, 1522, 1564, 2221, 2440
BstV2I	GAAGAC	1 cut(s)	1517
BstX2I	RGATCY	2 cut(s)	1928, 2552
BstXI	CCANNNNNNTGG	1 cut(s)	2388
BstYI	RGATCY	2 cut(s)	1928, 2552
BstZ17I	GTATAC	1 cut(s)	2330
BstZI	CGGCCG	1 cut(s)	1303
Bsu15I	ATCGAT	1 cut(s)	366
BsuRI	GGCC	4 cut(s)	5, 388, 1194, 1305
BsuTUI	ATCGAT	1 cut(s)	366
BtgI	CCRYGG	1 cut(s)	6
BtrI	CACGTC	2 cut(s)	763, 1056
BtsCI	GGATG	9 cut(s)	208, 252, 826, 925, 1024, 1411, 1474, 2434, 2610
BtsI	GCAGTG	2 cut(s)	1789, 2220
BtsIMutI	CAGTG	5 cut(s)	151, 389, 1789, 2220, 2501
BveI	ACCTGC	1 cut(s)	1329
Cac8I	GCNNGC	8 cut(s)	138, 717, 783, 1452, 1725, 1737, 1864, 1899
CciI	TCATGA	3 cut(s)	499, 666, 2621
CfoI	GCGC	1 cut(s)	1135
Cfr10I	RCCGGY	1 cut(s)	2127
Cfr13I	GGNCC	5 cut(s)	1193, 1222, 1806, 2467, 2512
ClaI	ATCGAT	1 cut(s)	366
CseI	GACGC	1 cut(s)	294
CsiI	ACCWGGT	1 cut(s)	1802
Csp6I	GTAC	7 cut(s)	60, 545, 1217, 1318, 1462, 1545, 1945
CspAI	ACCGGT	1 cut(s)	2127
CspCI	CAANNNNNGTGG	2 cut(s)	1359, 1394
CviAII	CATG	9 cut(s)	7, 418, 500, 667, 778, 1274, 1919, 2365, 2622
CviQI	GTAC	7 cut(s)	60, 545, 1217, 1318, 1462, 1545, 1945
DpnI	GATC	5 cut(s)	14, 504, 1514, 1930, 2554
DpnII	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
DraI	TTTAAA	1 cut(s)	268
DrdI	GACNNNNNNGTC	2 cut(s)	304, 2132
DseDI	GACNNNNNNGTC	2 cut(s)	304, 2132
EaeI	YGGCCR	2 cut(s)	3, 1303
EagI	CGGCCG	1 cut(s)	1303
Ecl136II	GAGCTC	1 cut(s)	861
EclXI	CGGCCG	1 cut(s)	1303
Eco130I	CCWWGG	6 cut(s)	6, 198, 459, 615, 1060, 2448
Eco24I	GRGCYC	1 cut(s)	863
Eco32I	GATATC	1 cut(s)	492
Eco47I	GGWCC	4 cut(s)	1222, 1806, 2467, 2512
Eco52I	CGGCCG	1 cut(s)	1303
Eco53kI	GAGCTC	1 cut(s)	861
Eco57I	CTGAAG	9 cut(s)	84, 209, 597, 723, 1013, 1341, 1676, 2318, 2591
Eco91I	GGTNACC	1 cut(s)	2288
EcoICRI	GAGCTC	1 cut(s)	861
EcoO109I	RGGNCCY	2 cut(s)	2467, 2512
EcoO65I	GGTNACC	1 cut(s)	2288
EcoRI	GAATTC	2 cut(s)	523, 2347
EcoRII	CCWGG	4 cut(s)	1014, 1292, 1758, 1802
EcoRV	GATATC	1 cut(s)	492
EcoT14I	CCWWGG	6 cut(s)	6, 198, 459, 615, 1060, 2448
EcoT38I	GRGCYC	1 cut(s)	863
ErhI	CCWWGG	6 cut(s)	6, 198, 459, 615, 1060, 2448
FaeI	CATG	9 cut(s)	10, 421, 503, 670, 781, 1277, 1922, 2368, 2625
FalI	AAGNNNNNCTT	6 cut(s)	182, 214, 570, 602, 1881, 1913
FaqI	GGGAC	4 cut(s)	929, 1066, 2480, 2525
FatI	CATG	9 cut(s)	6, 417, 499, 666, 777, 1273, 1918, 2364, 2621
FblI	GTMKAC	2 cut(s)	1011, 2329
FokI	GGATG	9 cut(s)	215, 259, 833, 912, 1031, 1418, 1481, 2441, 2597
FriOI	GRGCYC	1 cut(s)	863
FspBI	CTAG	7 cut(s)	137, 965, 1061, 1539, 1563, 1685, 2112
GlaI	GCGC	1 cut(s)	1134
GsuI	CTGGAG	1 cut(s)	1742
HaeIII	GGCC	4 cut(s)	5, 388, 1194, 1305
HapII	CCGG	1 cut(s)	2128
HgaI	GACGC	1 cut(s)	294
HhaI	GCGC	1 cut(s)	1135
Hin1II	CATG	9 cut(s)	10, 421, 503, 670, 781, 1277, 1922, 2368, 2625
Hin6I	GCGC	1 cut(s)	1133
HinP1I	GCGC	1 cut(s)	1133
HincII	GTYRAC	1 cut(s)	456
HindII	GTYRAC	1 cut(s)	456
HindIII	AAGCTT	2 cut(s)	1448, 2316
HinfI	GANTC	9 cut(s)	71, 161, 917, 1559, 1586, 1675, 1681, 2258, 2590
HpaII	CCGG	1 cut(s)	2128
HphI	GGTGA	4 cut(s)	532, 1097, 2045, 2552
Hpy166II	GTNNAC	4 cut(s)	456, 1012, 1882, 2330
Hpy8I	GTNNAC	4 cut(s)	456, 1012, 1882, 2330
HpyAV	CCTTC	6 cut(s)	113, 125, 1184, 1376, 1470, 1958
HpyCH4IV	ACGT	4 cut(s)	229, 762, 937, 1055
HpySE526I	ACGT	4 cut(s)	229, 762, 937, 1055
Hsp92II	CATG	9 cut(s)	10, 421, 503, 670, 781, 1277, 1922, 2368, 2625
HspAI	GCGC	1 cut(s)	1133
Kzo9I	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
LmnI	GCTCC	5 cut(s)	858, 866, 1414, 2416, 2607
Lsp1109I	GCAGC	9 cut(s)	44, 577, 963, 1172, 1408, 1522, 1564, 2221, 2440
MabI	ACCWGGT	1 cut(s)	1802
MaeI	CTAG	7 cut(s)	137, 965, 1061, 1539, 1563, 1685, 2112
MaeII	ACGT	4 cut(s)	229, 762, 937, 1055
MaeIII	GTNAC	2 cut(s)	217, 2288
MalI	GATC	5 cut(s)	14, 504, 1514, 1930, 2554
MboI	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
MboII	GAAGA	9 cut(s)	202, 682, 887, 1013, 1016, 1088, 1347, 1517, 2584
MfeI	CAATTG	2 cut(s)	156, 846
MflI	RGATCY	2 cut(s)	1928, 2552
MhlI	GDGCHC	4 cut(s)	863, 1884, 1912, 2251
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	6 cut(s)	80, 911, 1675, 1684, 2252, 2584
MmeI	TCCRAC	1 cut(s)	1371
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	1 cut(s)	1524
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	267, 411, 1401, 1620, 1851, 2298, 2343
MslI	CAYNNNNRTG	2 cut(s)	671, 2427
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	539, 2437
MspCI	CTTAAG	1 cut(s)	2297
MspI	CCGG	1 cut(s)	2128
MspR9I	CCNGG	4 cut(s)	1016, 1294, 1760, 1804
MunI	CAATTG	2 cut(s)	156, 846
MvaI	CCWGG	4 cut(s)	1016, 1294, 1760, 1804
NcoI	CCATGG	1 cut(s)	6
NdeII	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
NheI	GCTAGC	1 cut(s)	136
NlaIII	CATG	9 cut(s)	10, 421, 503, 670, 781, 1277, 1922, 2368, 2625
NlaIV	GGNNCC	3 cut(s)	1909, 2468, 2513
NmeAIII	GCCGAG	1 cut(s)	1480
NspI	RCATGY	1 cut(s)	781
PagI	TCATGA	3 cut(s)	499, 666, 2621
PdmI	GAANNNNTTC	1 cut(s)	1524
PfeI	GAWTC	3 cut(s)	161, 1559, 1586
PinAI	ACCGGT	1 cut(s)	2127
PleI	GAGTC	6 cut(s)	79, 911, 1675, 1683, 2252, 2584
PpsI	GAGTC	6 cut(s)	79, 911, 1675, 1683, 2252, 2584
PpuMI	RGGWCCY	2 cut(s)	2467, 2512
PsiI	TTATAA	2 cut(s)	1446, 1766
Psp124BI	GAGCTC	1 cut(s)	863
Psp5II	RGGWCCY	2 cut(s)	2467, 2512
Psp6I	CCWGG	4 cut(s)	1014, 1292, 1758, 1802
PspEI	GGTNACC	1 cut(s)	2288
PspGI	CCWGG	4 cut(s)	1014, 1292, 1758, 1802
PspN4I	GGNNCC	3 cut(s)	1909, 2468, 2513
PspPI	GGNCC	5 cut(s)	1193, 1222, 1806, 2467, 2512
PspPPI	RGGWCCY	2 cut(s)	2467, 2512
PstI	CTGCAG	1 cut(s)	2239
PsuI	RGATCY	2 cut(s)	1928, 2552
PvuII	CAGCTG	2 cut(s)	539, 2437
RsaI	GTAC	7 cut(s)	61, 546, 1218, 1319, 1463, 1546, 1946
RsaNI	GTAC	7 cut(s)	60, 545, 1217, 1318, 1462, 1545, 1945
RseI	CAYNNNNRTG	2 cut(s)	671, 2427
SacI	GAGCTC	1 cut(s)	863
SaqAI	TTAA	7 cut(s)	267, 411, 1401, 1620, 1851, 2298, 2343
Sau3AI	GATC	5 cut(s)	12, 502, 1512, 1928, 2552
Sau96I	GGNCC	5 cut(s)	1193, 1222, 1806, 2467, 2512
ScaI	AGTACT	1 cut(s)	1218
SchI	GAGTC	6 cut(s)	80, 911, 1675, 1684, 2252, 2584
ScrFI	CCNGG	4 cut(s)	1016, 1294, 1760, 1804
SduI	GDGCHC	4 cut(s)	863, 1884, 1912, 2251
SexAI	ACCWGGT	1 cut(s)	1802
SfcI	CTRYAG	1 cut(s)	2235
SinI	GGWCC	4 cut(s)	1222, 1806, 2467, 2512
SmiMI	CAYNNNNRTG	2 cut(s)	671, 2427
SmlI	CTYRAG	3 cut(s)	339, 767, 2297
SmoI	CTYRAG	3 cut(s)	339, 767, 2297
SsiI	CCGC	3 cut(s)	68, 719, 2580
SspI	AATATT	1 cut(s)	1618
SspMI	CTAG	7 cut(s)	137, 965, 1061, 1539, 1563, 1685, 2112
SstI	GAGCTC	1 cut(s)	863
StyD4I	CCNGG	4 cut(s)	1014, 1292, 1758, 1802
StyI	CCWWGG	6 cut(s)	6, 198, 459, 615, 1060, 2448
TaiI	ACGT	4 cut(s)	232, 765, 940, 1058
TaqI	TCGA	5 cut(s)	366, 695, 1992, 2124, 2400
TatI	WGTACW	2 cut(s)	544, 1216
TauI	GCSGC	1 cut(s)	722
TfiI	GAWTC	3 cut(s)	161, 1559, 1586
Tru1I	TTAA	7 cut(s)	267, 411, 1401, 1620, 1851, 2298, 2343
Tru9I	TTAA	7 cut(s)	267, 411, 1401, 1620, 1851, 2298, 2343
TscAI	CASTG	5 cut(s)	151, 389, 1789, 2220, 2508
TseI	GCWGC	9 cut(s)	32, 590, 976, 1160, 1421, 1535, 1577, 2234, 2453
TspDTI	ATGAA	6 cut(s)	569, 683, 888, 1599, 2386, 2610
TspGWI	ACGGA	1 cut(s)	572
TspRI	CASTG	5 cut(s)	151, 389, 1789, 2220, 2508
Vha464I	CTTAAG	1 cut(s)	2297
VneI	GTGCAC	1 cut(s)	1880
VpaK11BI	GGWCC	4 cut(s)	1222, 1806, 2467, 2512
XapI	RAATTY	4 cut(s)	523, 1987, 2188, 2347
XbaI	TCTAGA	2 cut(s)	1562, 1684
XceI	RCATGY	1 cut(s)	781
XcmI	CCANNNNNNNNNTGG	1 cut(s)	503
XmaJI	CCTAGG	1 cut(s)	1060
XmiI	GTMKAC	2 cut(s)	1011, 2329
XmnI	GAANNNNTTC	1 cut(s)	1524
XspI	CTAG	7 cut(s)	137, 965, 1061, 1539, 1563, 1685, 2112
ZrmI	AGTACT	1 cut(s)	1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.