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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g15790 FvH4_6g15810 |
| prunus_persica | Prupe.6G237100_v2.0.a1 |
| pyrus_communis | pycom04g09370 pycom12g11790 |
| rosa_laevigata | RLG00000024343 RLG00000024344 |
| rosa_multiflora | Rmu_sc0004871.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00411800 |
| rosa_rugosa | Rorug03G0102300 |
| rosa_samantha | Rh3AG151600 Rh3AG151700 Rh3BG175100 Rh3BG175200 Rh3CG166300 Rh3CG166500 Rh3DG200300 Rh3DG200400 |
| rosa_wichuraiana | Rw3G014290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 429 |
| AclWI | GGATC | 1 cut(s) | 212 |
| AcuI | CTGAAG | 1 cut(s) | 207 |
| AgsI | TTSAA | 2 cut(s) | 213, 416 |
| AluBI | AGCT | 4 cut(s) | 87, 137, 298, 419 |
| AluI | AGCT | 4 cut(s) | 87, 137, 298, 419 |
| Alw26I | GTCTC | 1 cut(s) | 116 |
| AlwI | GGATC | 1 cut(s) | 212 |
| AoxI | GGCC | 1 cut(s) | 204 |
| ApeKI | GCWGC | 2 cut(s) | 137, 140 |
| BbsI | GAAGAC | 1 cut(s) | 430 |
| BbvI | GCAGC | 2 cut(s) | 124, 127 |
| BccI | CCATC | 2 cut(s) | 113, 160 |
| BcoDI | GTCTC | 1 cut(s) | 116 |
| BfaI | CTAG | 1 cut(s) | 134 |
| BfmI | CTRYAG | 2 cut(s) | 111, 403 |
| BisI | GCNGC | 2 cut(s) | 138, 141 |
| BlsI | GCNGC | 2 cut(s) | 139, 142 |
| BmiI | GGNNCC | 1 cut(s) | 384 |
| BpiI | GAAGAC | 1 cut(s) | 430 |
| BpmI | CTGGAG | 1 cut(s) | 291 |
| BsaBI | GATNNNNATC | 1 cut(s) | 38 |
| Bse3DI | GCAATG | 1 cut(s) | 44 |
| Bse8I | GATNNNNATC | 1 cut(s) | 38 |
| BseGI | GGATG | 1 cut(s) | 105 |
| BseJI | GATNNNNATC | 1 cut(s) | 38 |
| BseMI | GCAATG | 1 cut(s) | 44 |
| BseXI | GCAGC | 2 cut(s) | 124, 127 |
| BshFI | GGCC | 1 cut(s) | 206 |
| BsmAI | GTCTC | 1 cut(s) | 116 |
| BsmBI | CGTCTC | 1 cut(s) | 116 |
| BsnI | GGCC | 1 cut(s) | 206 |
| Bsp143I | GATC | 2 cut(s) | 33, 217 |
| BspACI | CCGC | 1 cut(s) | 429 |
| BspANI | GGCC | 1 cut(s) | 206 |
| BspCNI | CTCAG | 1 cut(s) | 4 |
| BspLI | GGNNCC | 1 cut(s) | 384 |
| BspPI | GGATC | 1 cut(s) | 212 |
| BsrDI | GCAATG | 1 cut(s) | 44 |
| BssMI | GATC | 2 cut(s) | 33, 217 |
| Bst4CI | ACNGT | 2 cut(s) | 407, 436 |
| Bst6I | CTCTTC | 1 cut(s) | 214 |
| BstDEI | CTNAG | 1 cut(s) | 12 |
| BstF5I | GGATG | 1 cut(s) | 105 |
| BstKTI | GATC | 2 cut(s) | 36, 220 |
| BstMAI | GTCTC | 1 cut(s) | 116 |
| BstMBI | GATC | 2 cut(s) | 33, 217 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstSFI | CTRYAG | 2 cut(s) | 111, 403 |
| BstV1I | GCAGC | 2 cut(s) | 124, 127 |
| BstV2I | GAAGAC | 1 cut(s) | 430 |
| BstX2I | RGATCY | 1 cut(s) | 217 |
| BstYI | RGATCY | 1 cut(s) | 217 |
| BsuRI | GGCC | 1 cut(s) | 206 |
| BtsCI | GGATG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 1 cut(s) | 432 |
| CviAII | CATG | 1 cut(s) | 31 |
| DdeI | CTNAG | 1 cut(s) | 12 |
| DpnI | GATC | 2 cut(s) | 35, 219 |
| DpnII | GATC | 2 cut(s) | 33, 217 |
| Eam1104I | CTCTTC | 1 cut(s) | 214 |
| EarI | CTCTTC | 1 cut(s) | 214 |
| EciI | GGCGGA | 1 cut(s) | 418 |
| Eco57I | CTGAAG | 1 cut(s) | 207 |
| EcoT22I | ATGCAT | 1 cut(s) | 32 |
| Esp3I | CGTCTC | 1 cut(s) | 116 |
| FaeI | CATG | 1 cut(s) | 34 |
| FaiI | YATR | 7 cut(s) | 28, 32, 97, 99, 357, 367, 399 |
| FatI | CATG | 1 cut(s) | 30 |
| FauNDI | CATATG | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 2 cut(s) | 138, 141 |
| FokI | GGATG | 1 cut(s) | 92 |
| Fsp4HI | GCNGC | 2 cut(s) | 138, 141 |
| FspBI | CTAG | 1 cut(s) | 134 |
| GluI | GCNGC | 2 cut(s) | 138, 141 |
| GsuI | CTGGAG | 1 cut(s) | 291 |
| HaeIII | GGCC | 1 cut(s) | 206 |
| Hin1II | CATG | 1 cut(s) | 34 |
| HindIII | AAGCTT | 1 cut(s) | 85 |
| HinfI | GANTC | 1 cut(s) | 281 |
| Hpy166II | GTNNAC | 1 cut(s) | 337 |
| Hpy188I | TCNGA | 2 cut(s) | 13, 443 |
| Hpy188III | TCNNGA | 4 cut(s) | 185, 221, 308, 386 |
| Hpy8I | GTNNAC | 1 cut(s) | 337 |
| HpyAV | CCTTC | 2 cut(s) | 336, 372 |
| HpyCH4III | ACNGT | 2 cut(s) | 407, 436 |
| HpyCH4V | TGCA | 1 cut(s) | 30 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| HpyF3I | CTNAG | 1 cut(s) | 12 |
| Hsp92II | CATG | 1 cut(s) | 34 |
| Kzo9I | GATC | 2 cut(s) | 33, 217 |
| LmnI | GCTCC | 3 cut(s) | 364, 388, 424 |
| LpnPI | CCDG | 8 cut(s) | 198, 205, 234, 291, 308, 321, 365, 399 |
| Lsp1109I | GCAGC | 2 cut(s) | 124, 127 |
| MaeI | CTAG | 1 cut(s) | 134 |
| MaeIII | GTNAC | 1 cut(s) | 392 |
| MalI | GATC | 2 cut(s) | 35, 219 |
| MboI | GATC | 2 cut(s) | 33, 217 |
| MboII | GAAGA | 3 cut(s) | 153, 201, 430 |
| MflI | RGATCY | 1 cut(s) | 217 |
| MluCI | AATT | 2 cut(s) | 411, 423 |
| MnlI | CCTC | 3 cut(s) | 188, 188, 217 |
| Mph1103I | ATGCAT | 1 cut(s) | 32 |
| MseI | TTAA | 1 cut(s) | 372 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NdeI | CATATG | 1 cut(s) | 97 |
| NdeII | GATC | 2 cut(s) | 33, 217 |
| NlaIII | CATG | 1 cut(s) | 34 |
| NlaIV | GGNNCC | 1 cut(s) | 384 |
| NsiI | ATGCAT | 1 cut(s) | 32 |
| PfeI | GAWTC | 1 cut(s) | 281 |
| PkrI | GCNGC | 2 cut(s) | 139, 142 |
| PspN4I | GGNNCC | 1 cut(s) | 384 |
| PsuI | RGATCY | 1 cut(s) | 217 |
| SaqAI | TTAA | 1 cut(s) | 372 |
| SatI | GCNGC | 2 cut(s) | 138, 141 |
| Sau3AI | GATC | 2 cut(s) | 33, 217 |
| SetI | ASST | 5 cut(s) | 89, 139, 259, 300, 421 |
| SfcI | CTRYAG | 2 cut(s) | 111, 403 |
| Sse9I | AATT | 2 cut(s) | 411, 423 |
| SsiI | CCGC | 1 cut(s) | 429 |
| SspMI | CTAG | 1 cut(s) | 134 |
| TaaI | ACNGT | 2 cut(s) | 407, 436 |
| TasI | AATT | 2 cut(s) | 411, 423 |
| TfiI | GAWTC | 1 cut(s) | 281 |
| Tru1I | TTAA | 1 cut(s) | 372 |
| Tru9I | TTAA | 1 cut(s) | 372 |
| TscAI | CASTG | 1 cut(s) | 439 |
| TseI | GCWGC | 2 cut(s) | 137, 140 |
| TspDTI | ATGAA | 2 cut(s) | 240, 354 |
| TspRI | CASTG | 1 cut(s) | 439 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 199 |
| XspI | CTAG | 1 cut(s) | 134 |
| Zsp2I | ATGCAT | 1 cut(s) | 32 |