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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g15790 FvH4_6g15810 |
| prunus_persica | Prupe.6G237100_v2.0.a1 |
| pyrus_communis | pycom04g09370 pycom12g11790 |
| rosa_laevigata | RLG00000024343 RLG00000024344 |
| rosa_multiflora | Rmu_sc0004871.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00411800 |
| rosa_rugosa | Rorug03G0102300 |
| rosa_samantha | Rh3AG151600 Rh3AG151700 Rh3BG175100 Rh3BG175200 Rh3CG166300 Rh3CG166500 Rh3DG200300 Rh3DG200400 |
| rosa_wichuraiana | Rw3G014290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 588 |
| AccI | GTMKAC | 1 cut(s) | 11 |
| AciI | CCGC | 2 cut(s) | 93, 168 |
| AcsI | RAATTY | 1 cut(s) | 413 |
| AcuI | CTGAAG | 2 cut(s) | 96, 476 |
| AcyI | GRCGYC | 2 cut(s) | 159, 585 |
| AfaI | GTAC | 1 cut(s) | 563 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 32 |
| AgsI | TTSAA | 3 cut(s) | 179, 254, 419 |
| AjnI | CCWGG | 1 cut(s) | 572 |
| AluBI | AGCT | 3 cut(s) | 190, 224, 284 |
| AluI | AGCT | 3 cut(s) | 190, 224, 284 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 293, 335 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 187 |
| ApoI | RAATTY | 1 cut(s) | 413 |
| AspS9I | GGNCC | 1 cut(s) | 556 |
| AsuHPI | GGTGA | 3 cut(s) | 47, 135, 434 |
| AvaII | GGWCC | 1 cut(s) | 556 |
| BbsI | GAAGAC | 2 cut(s) | 294, 464 |
| BbvI | GCAGC | 1 cut(s) | 199 |
| BccI | CCATC | 4 cut(s) | 70, 148, 154, 457 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 8, 42 |
| BciT130I | CCWGG | 1 cut(s) | 574 |
| BfmI | CTRYAG | 2 cut(s) | 27, 388 |
| BisI | GCNGC | 2 cut(s) | 168, 188 |
| BlsI | GCNGC | 2 cut(s) | 169, 189 |
| Bme1390I | CCNGG | 1 cut(s) | 574 |
| Bme18I | GGWCC | 1 cut(s) | 556 |
| BmgT120I | GGNCC | 1 cut(s) | 556 |
| BmiI | GGNNCC | 1 cut(s) | 360 |
| BmrFI | CCNGG | 1 cut(s) | 574 |
| BpiI | GAAGAC | 2 cut(s) | 294, 464 |
| BpmI | CTGGAG | 3 cut(s) | 186, 270, 333 |
| Bpu10I | CCTNAGC | 1 cut(s) | 163 |
| BsaHI | GRCGYC | 2 cut(s) | 159, 585 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 43, 73 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 32 |
| Bse1I | ACTGG | 1 cut(s) | 559 |
| BseBI | CCWGG | 1 cut(s) | 574 |
| BseGI | GGATG | 1 cut(s) | 364 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseNI | ACTGG | 1 cut(s) | 559 |
| BseRI | GAGGAG | 4 cut(s) | 123, 228, 231, 351 |
| BseXI | GCAGC | 1 cut(s) | 199 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 548 |
| BspACI | CCGC | 2 cut(s) | 93, 168 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 360 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BsrI | ACTGG | 1 cut(s) | 559 |
| BssMI | GATC | 1 cut(s) | 548 |
| BssNI | GRCGYC | 2 cut(s) | 159, 585 |
| Bst2UI | CCWGG | 1 cut(s) | 574 |
| Bst4CI | ACNGT | 2 cut(s) | 300, 373 |
| Bst6I | CTCTTC | 1 cut(s) | 115 |
| BstACI | GRCGYC | 2 cut(s) | 159, 585 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 335 |
| BstC8I | GCNNGC | 3 cut(s) | 27, 222, 282 |
| BstDEI | CTNAG | 1 cut(s) | 163 |
| BstF5I | GGATG | 1 cut(s) | 364 |
| BstKTI | GATC | 1 cut(s) | 551 |
| BstMBI | GATC | 1 cut(s) | 548 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 167, 335 |
| BstNI | CCWGG | 1 cut(s) | 574 |
| BstSCI | CCNGG | 1 cut(s) | 572 |
| BstSFI | CTRYAG | 2 cut(s) | 27, 388 |
| BstV1I | GCAGC | 1 cut(s) | 199 |
| BstV2I | GAAGAC | 2 cut(s) | 294, 464 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 364 |
| Cac8I | GCNNGC | 3 cut(s) | 27, 222, 282 |
| CaiI | CAGNNNCTG | 2 cut(s) | 293, 335 |
| Cfr13I | GGNCC | 1 cut(s) | 556 |
| CseI | GACGC | 3 cut(s) | 167, 269, 327 |
| Csp6I | GTAC | 1 cut(s) | 562 |
| CviAII | CATG | 1 cut(s) | 355 |
| CviJI | RGCY | 9 cut(s) | 5, 79, 167, 190, 224, 284, 359, 506, 544 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 79, 167, 190, 224, 284, 359, 506, 544 |
| CviQI | GTAC | 1 cut(s) | 562 |
| DdeI | CTNAG | 1 cut(s) | 163 |
| DpnI | GATC | 1 cut(s) | 550 |
| DpnII | GATC | 1 cut(s) | 548 |
| Eam1104I | CTCTTC | 1 cut(s) | 115 |
| EarI | CTCTTC | 1 cut(s) | 115 |
| Eco47I | GGWCC | 1 cut(s) | 556 |
| Eco57I | CTGAAG | 2 cut(s) | 96, 476 |
| EcoRII | CCWGG | 1 cut(s) | 572 |
| FaeI | CATG | 1 cut(s) | 358 |
| FaiI | YATR | 4 cut(s) | 153, 276, 356, 432 |
| FatI | CATG | 1 cut(s) | 354 |
| FblI | GTMKAC | 1 cut(s) | 11 |
| Fnu4HI | GCNGC | 2 cut(s) | 168, 188 |
| FokI | GGATG | 1 cut(s) | 351 |
| Fsp4HI | GCNGC | 2 cut(s) | 168, 188 |
| GluI | GCNGC | 2 cut(s) | 168, 188 |
| GsuI | CTGGAG | 3 cut(s) | 186, 270, 333 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HgaI | GACGC | 3 cut(s) | 167, 269, 327 |
| Hin1I | GRCGYC | 2 cut(s) | 159, 585 |
| Hin1II | CATG | 1 cut(s) | 358 |
| HincII | GTYRAC | 2 cut(s) | 12, 259 |
| HindII | GTYRAC | 2 cut(s) | 12, 259 |
| HinfI | GANTC | 3 cut(s) | 40, 116, 451 |
| HphI | GGTGA | 3 cut(s) | 47, 135, 434 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 259 |
| Hpy188I | TCNGA | 7 cut(s) | 85, 115, 124, 439, 456, 553, 590 |
| Hpy188III | TCNNGA | 4 cut(s) | 74, 203, 266, 350 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 259 |
| Hpy99I | CGWCG | 1 cut(s) | 13 |
| HpyAV | CCTTC | 4 cut(s) | 90, 225, 243, 413 |
| HpyCH4III | ACNGT | 2 cut(s) | 300, 373 |
| HpyCH4IV | ACGT | 1 cut(s) | 585 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 167, 335 |
| HpyF3I | CTNAG | 1 cut(s) | 163 |
| HpySE526I | ACGT | 1 cut(s) | 585 |
| Hsp92I | GRCGYC | 2 cut(s) | 159, 585 |
| Hsp92II | CATG | 1 cut(s) | 358 |
| Kzo9I | GATC | 1 cut(s) | 548 |
| LmnI | GCTCC | 3 cut(s) | 268, 289, 364 |
| Lsp1109I | GCAGC | 1 cut(s) | 199 |
| MaeII | ACGT | 1 cut(s) | 585 |
| MalI | GATC | 1 cut(s) | 550 |
| MboI | GATC | 1 cut(s) | 548 |
| MboII | GAAGA | 5 cut(s) | 102, 294, 437, 469, 538 |
| MluCI | AATT | 3 cut(s) | 174, 413, 566 |
| MnlI | CCTC | 9 cut(s) | 16, 144, 249, 252, 372, 391, 547, 570, 574 |
| MseI | TTAA | 2 cut(s) | 192, 519 |
| MspA1I | CMGCKG | 1 cut(s) | 170 |
| MspR9I | CCNGG | 1 cut(s) | 574 |
| MvaI | CCWGG | 1 cut(s) | 574 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 167, 335 |
| NdeII | GATC | 1 cut(s) | 548 |
| NlaIII | CATG | 1 cut(s) | 358 |
| NlaIV | GGNNCC | 1 cut(s) | 360 |
| PfeI | GAWTC | 3 cut(s) | 40, 116, 451 |
| PkrI | GCNGC | 2 cut(s) | 169, 189 |
| Psp6I | CCWGG | 1 cut(s) | 572 |
| PspGI | CCWGG | 1 cut(s) | 572 |
| PspN4I | GGNNCC | 1 cut(s) | 360 |
| PspPI | GGNCC | 1 cut(s) | 556 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| PstNI | CAGNNNCTG | 2 cut(s) | 293, 335 |
| RsaI | GTAC | 1 cut(s) | 563 |
| RsaNI | GTAC | 1 cut(s) | 562 |
| SalI | GTCGAC | 1 cut(s) | 10 |
| SaqAI | TTAA | 2 cut(s) | 192, 519 |
| SatI | GCNGC | 2 cut(s) | 168, 188 |
| Sau3AI | GATC | 1 cut(s) | 548 |
| Sau96I | GGNCC | 1 cut(s) | 556 |
| ScrFI | CCNGG | 1 cut(s) | 574 |
| SetI | ASST | 6 cut(s) | 192, 226, 286, 295, 424, 588 |
| SfcI | CTRYAG | 2 cut(s) | 27, 388 |
| SinI | GGWCC | 1 cut(s) | 556 |
| Sse9I | AATT | 3 cut(s) | 174, 413, 566 |
| SsiI | CCGC | 2 cut(s) | 93, 168 |
| StyD4I | CCNGG | 1 cut(s) | 572 |
| TaaI | ACNGT | 2 cut(s) | 300, 373 |
| TaiI | ACGT | 1 cut(s) | 588 |
| TaqI | TCGA | 2 cut(s) | 11, 384 |
| TasI | AATT | 3 cut(s) | 174, 413, 566 |
| TauI | GCSGC | 1 cut(s) | 170 |
| TfiI | GAWTC | 3 cut(s) | 40, 116, 451 |
| Tru1I | TTAA | 2 cut(s) | 192, 519 |
| Tru9I | TTAA | 2 cut(s) | 192, 519 |
| TseI | GCWGC | 1 cut(s) | 187 |
| TspDTI | ATGAA | 2 cut(s) | 45, 108 |
| VpaK11BI | GGWCC | 1 cut(s) | 556 |
| XapI | RAATTY | 1 cut(s) | 413 |
| XmiI | GTMKAC | 1 cut(s) | 11 |
| ZraI | GACGTC | 1 cut(s) | 586 |