Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0002652

Physical Location & Seq

Genomic Coordinates Reverse (-)

20669502 .. 20672730

Gene Structure 3229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g18530.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGCCTTTGTCCGAGCTTTATCGGATGGCCGGAAGGGTTGATTCAAGTCAAGATTTTGAAAATGATTTTCTTGAGTTGGTATGGGAAAATGGTCAGGTTATGATGCAGGGTCAGTCCAGTAGAACTAGGAAGAATCCGTCTTTTAATAGCTTACCGTCTTTTAACAACCCGAAAAATCGAGATAGAGATGTAGGAAATGGCAACATTGCAAAGACAGGAAAATTTGGGTCTGTGGTGGATTCTGGATTGGATGAAATTCCGTTGTCAGTGCCATCTTCTGAGATGGGTTTGAGTGAGGATGATGACATGTTGCCTTGGTTGAATTATTCCATTGATGAGCCTTTACATCATGAGTACTGCCATGATTTTTTGCCTGAATTTTCTAGTGCAACTGCAAATGAGGCTTCCACCAATCACAATCTTGCATCGATCGATAAGAGGAGTAGTTCTAGTCAGGTGTTTAGGGATTCCAATTCCAATTCTGCACATGAAGGTGCTTGTTTGCAACAAGGGAATGTGGGAAAGGTTCCTTTGAACGGTGGTGCTGATGTTAGCAGACCTAGATCTGGTGCTACTCAGTTGTATTCGTTATCATCGCAGCGATCCCAAGCGTCGTTTCCATCTCTTAGATCAAGGGTTTCGGATACTGCTGGTGATAATACGAGTAGTGCCACTCATCGCGGTGTTGGCAAGAATTCAACTCAGATTTCATCTGCAGGCGGGTCTCCTGGAATAAAGATACCGAGGCCAGATCCAGTAAAGCCTAGCAATAATAATCCATCCATAGTGAACTTTTCCCATTTTTCACGACCCGCTGCTCTTGCGAAAGCTAATGTTCAGACCAACGGTGTGATGGCTGGTTCAGGTTCATCAAGCATGATAAGGATTGCAAATAAGGACAAGTTTTCAGCTGCAACTAGTAACAATCTGCCCGAGTCAATGCTAATTGATTCAAGCATTAGTGCACCAAAGGAGTCAAATTCACAATGCCAACAGATTCTAGTGAGATCCAGTGTTGAATTGAAACCAACAGAAGCTCAGCCTCTTGAGGAACCATGTACTGCTAAGCGGTCTGAGGGAACATGCCAAGAGGAAACCTCTAAGAATGACATAAATTCCAATCATATTCCTTGTGAAAGTGCAGTTAGGGTATCTCCAAATGGTGAAAAAACTGTGGAGCCAGTTGTTGCTTCTTCTGTTTGCTCAGGCAATAGTGTGGAGAGAGGTTCAGATGACCCAACACAAGCTTTGAAGAGAAAATTTCGTGAGACTGATGAGTCTGAATGCCATAGTGATGATGTAGAGGAAGAATACATGGGTGTGAAGAAAGGAGCTCATGCTCAAGGCATGGGTTCCAAGAGAAGCAGAGCAGCAGAAGTGCATAATTTATCAGAAAGGAAGCGAAGGGACAGAATCAATGAGAAGATGCGTGCGCTACAGGAACTCATACCCAATTGCAATAAGGTGGACAAAGCTTCAATGCTGGATGAGGCTATTGAGTATTTGAAGACGCTTCAACTCCAATTACAGATGATGTCAATGGGAGCTGGTATGTATATGCCACCAATGATGTTACCACCAGGAATGCAACACATGCATGGACCCTGTATGGCTCATTTCTCGCCCATGGGTGTTGGAATGGGAATGGGAATGGGATTAGGCATGGGTTTTGGGATGGGTATGCCCGACATGATTGGTGCATCTTCTAGTTACCCTATGCTTCAGGTGCCCCCCATGCAAGGAGCACATTTCCCTGGTTCACATATGGCAGGGCACACCACCTTCAATGGGATGATGGGATCTAACCTTCAGATGTTTGGGCTTCCTAGTCAAGGAGTTCCAGTGCCGATGCAACGTGCCCCCTTAGCTCCCTCATCGGCAGGTCCCTTTGTGAAGTCATCTGCAGGACCAAATGCAGGCAGTTCAGGCGGACCTGTGGAAAATGTGGAATCAGCTCCAGTTTCTGGTTCAAAGGATTCGGTTCAGAACATGAACTCACAAGCGATGCAAAGCAGCAATGCCAATAGCTCTATGAATCAAACATCTAGTCAGGGCCAAGCAACTAATGAGGGATTTGCACAGTCTGCATTGGTGCGAAATAATGTTCAAGCGACTGATGTTAACAACAACAGAGCTGACGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009704 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009791 GO:0009889 GO:0009893 GO:0009987 GO:0010017 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0031539 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048518 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 ko04712 map04075 map04712

Pfam Domains

Protein Families

HLH

Protein Analysis

715

Amino Acids

76.21

Weight (kDa)

5.9

Isoelectric Point (pI)

55.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09530 AT1G09530 AT1G09530 AT1G09530 AT1G09530 AT1G09530
fragaria_vesca	FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610 FvH4_6g08610
malus_domestica	MD04G1185100.v1.1 MD12G1198900.v1.1 MD12G1199000.v1.1
prunus_persica	Prupe.6G303500_v2.0.a1
pyrus_communis	pycom04g16430 pycom12g18530
rosa_chinensis	RchiOBHm_Chr3g0458701
rosa_laevigata	RLG00000025141
rosa_multiflora	Rmu_co8042810.1_g000001 Rmu_sc0001634.1_g000012
rosa_roxburghii	Rroxscaffold_6G00420860
rosa_rugosa	Rorug03G0030900 Rorug03G0031000 Rorug03G0031100 Rorug03G0031200.1 Rorug03G0031300
rosa_samantha	Rh3AG088900 Rh3BG091700 Rh3CG092100 Rh3DG092700
rosa_wichuraiana	Rw3G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1276
Acc36I	ACCTGC	1 cut(s)	1871
AccB1I	GGYRCC	1 cut(s)	1726
AccB7I	CCANNNNNTGG	1 cut(s)	1964
AccII	CGCG	1 cut(s)	681
AciI	CCGC	5 cut(s)	681, 720, 813, 1069, 1929
AclWI	GGATC	4 cut(s)	597, 746, 1002, 1807
AcoI	YGGCCR	1 cut(s)	27
AcsI	RAATTY	7 cut(s)	221, 255, 377, 694, 979, 1114, 1259
AcuI	CTGAAG	2 cut(s)	1706, 1793
AfaI	GTAC	2 cut(s)	356, 1060
AfiI	CCNNNNNNNGG	7 cut(s)	536, 566, 1739, 1788, 1832, 1916, 1964
AflIII	ACRYGT	1 cut(s)	306
AhlI	ACTAGT	1 cut(s)	917
AjnI	CCWGG	3 cut(s)	727, 1579, 1753
AjuI	GAANNNNNNNTTGG	2 cut(s)	600, 632
Alw21I	GWGCWC	3 cut(s)	967, 1336, 1747
Alw26I	GTCTC	2 cut(s)	729, 1262
Alw44I	GTGCAC	1 cut(s)	963
AlwI	GGATC	4 cut(s)	597, 746, 1002, 1807
AlwNI	CAGNNNCTG	1 cut(s)	1964
Ama87I	CYCGRG	1 cut(s)	932
AoxI	GGCC	3 cut(s)	27, 746, 2053
ApaLI	GTGCAC	1 cut(s)	963
ApeKI	GCWGC	5 cut(s)	598, 815, 911, 1370, 2013
ApoI	RAATTY	7 cut(s)	221, 255, 377, 694, 979, 1114, 1259
ArsI	GACNNNNNNTTYG	2 cut(s)	2032, 2064
AspLEI	GCGC	1 cut(s)	1435
AspS9I	GGNCC	5 cut(s)	1601, 1883, 1907, 1931, 2053
AsuHPI	GGTGA	2 cut(s)	665, 1175
AvaI	CYCGRG	1 cut(s)	932
AvaII	GGWCC	4 cut(s)	1601, 1883, 1907, 1931
BaeGI	GKGCMC	4 cut(s)	967, 1731, 1776, 1861
BanI	GGYRCC	1 cut(s)	1726
BanII	GRGCYC	1 cut(s)	1336
BbsI	GAAGAC	1 cut(s)	1514
Bbv12I	GWGCWC	3 cut(s)	967, 1336, 1747
BbvI	GCAGC	5 cut(s)	610, 802, 898, 1382, 2025
BccI	CCATC	8 cut(s)	19, 277, 280, 628, 787, 847, 1669, 1789
BciT130I	CCWGG	3 cut(s)	729, 1581, 1755
BciVI	GTATCC	1 cut(s)	637
BcoDI	GTCTC	2 cut(s)	729, 1262
BcuI	ACTAGT	1 cut(s)	917
BfmI	CTRYAG	3 cut(s)	714, 1436, 1902
BfuAI	ACCTGC	1 cut(s)	1871
BfuI	GTATCC	1 cut(s)	637
BglII	AGATCT	1 cut(s)	563
BisI	GCNGC	5 cut(s)	599, 816, 912, 1371, 2014
BlpI	GCTNAGC	2 cut(s)	1038, 1065
BlsI	GCNGC	5 cut(s)	600, 817, 913, 1372, 2015
BmcAI	AGTACT	1 cut(s)	356
Bme1390I	CCNGG	3 cut(s)	729, 1581, 1755
Bme18I	GGWCC	4 cut(s)	1601, 1883, 1907, 1931
BmeT110I	CYCGRG	1 cut(s)	932
BmgT120I	GGNCC	5 cut(s)	1601, 1883, 1907, 1931, 2053
BmiI	GGNNCC	7 cut(s)	528, 1053, 1179, 1354, 1603, 1728, 1885
BmrFI	CCNGG	3 cut(s)	729, 1581, 1755
BmsI	GCATC	6 cut(s)	93, 434, 1416, 1709, 1839, 1995
BpiI	GAAGAC	1 cut(s)	1514
BplI	GAGNNNNNCTC	2 cut(s)	1082, 1114
BpmI	CTGGAG	1 cut(s)	1941
Bpu10I	CCTNAGC	2 cut(s)	1204, 1864
Bpu1102I	GCTNAGC	2 cut(s)	1038, 1065
BpuEI	CTTGAG	3 cut(s)	92, 1067, 1326
Bsa29I	ATCGAT	2 cut(s)	428, 432
BsaI	GGTCTC	1 cut(s)	729
BsaJI	CCNNGG	4 cut(s)	314, 743, 1626, 1753
BsaXI	ACNNNNNCTCC	2 cut(s)	1827, 1857
Bsc4I	CCNNNNNNNGG	7 cut(s)	536, 566, 1739, 1788, 1832, 1916, 1964
Bse1I	ACTGG	6 cut(s)	117, 755, 1011, 1181, 1841, 1958
Bse3DI	GCAATG	2 cut(s)	204, 2023
BseBI	CCWGG	3 cut(s)	729, 1581, 1755
BseCI	ATCGAT	2 cut(s)	428, 432
BseDI	CCNNGG	4 cut(s)	314, 743, 1626, 1753
BseGI	GGATG	7 cut(s)	30, 256, 304, 779, 1492, 1680, 1797
BseLI	CCNNNNNNNGG	7 cut(s)	536, 566, 1739, 1788, 1832, 1916, 1964
BseMI	GCAATG	2 cut(s)	204, 2023
BseMII	CTCAG	6 cut(s)	270, 590, 716, 1052, 1065, 1218
BseNI	ACTGG	6 cut(s)	117, 755, 1011, 1181, 1841, 1958
BseRI	GAGGAG	1 cut(s)	454
BseSI	GKGCMC	4 cut(s)	967, 1731, 1776, 1861
BseXI	GCAGC	5 cut(s)	610, 802, 898, 1382, 2025
BsgI	GTGCAG	2 cut(s)	468, 1161
Bsh1236I	CGCG	1 cut(s)	681
Bsh1285I	CGRYCG	1 cut(s)	432
BshFI	GGCC	3 cut(s)	29, 748, 2055
BshNI	GGYRCC	1 cut(s)	1726
BshVI	ATCGAT	2 cut(s)	428, 432
BsiEI	CGRYCG	1 cut(s)	432
BsiHKAI	GWGCWC	3 cut(s)	967, 1336, 1747
BsiHKCI	CYCGRG	1 cut(s)	932
BsiSI	CCGG	1 cut(s)	30
BslFI	GGGAC	2 cut(s)	1421, 1869
BslI	CCNNNNNNNGG	7 cut(s)	536, 566, 1739, 1788, 1832, 1916, 1964
BsmAI	GTCTC	2 cut(s)	729, 1262
BsmFI	GGGAC	2 cut(s)	1421, 1869
BsmI	GAATGC	2 cut(s)	1289, 1590
BsnI	GGCC	3 cut(s)	29, 748, 2055
Bso31I	GGTCTC	1 cut(s)	729
BsoBI	CYCGRG	1 cut(s)	932
Bsp1286I	GDGCHC	6 cut(s)	967, 1336, 1731, 1747, 1776, 1861
Bsp143I	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
Bsp1720I	GCTNAGC	2 cut(s)	1038, 1065
Bsp19I	CCATGG	1 cut(s)	1626
BspACI	CCGC	5 cut(s)	681, 720, 813, 1069, 1929
BspANI	GGCC	3 cut(s)	29, 748, 2055
BspCNI	CTCAG	6 cut(s)	271, 589, 715, 1051, 1066, 1217
BspDI	ATCGAT	2 cut(s)	428, 432
BspFNI	CGCG	1 cut(s)	681
BspHI	TCATGA	1 cut(s)	349
BspLI	GGNNCC	7 cut(s)	528, 1053, 1179, 1354, 1603, 1728, 1885
BspMAI	CTGCAG	2 cut(s)	718, 1906
BspMI	ACCTGC	1 cut(s)	1871
BspPI	GGATC	4 cut(s)	597, 746, 1002, 1807
BspT107I	GGYRCC	1 cut(s)	1726
BspTNI	GGTCTC	1 cut(s)	729
BsrDI	GCAATG	2 cut(s)	204, 2023
BsrI	ACTGG	6 cut(s)	117, 755, 1011, 1181, 1841, 1958
BssECI	CCNNGG	4 cut(s)	314, 743, 1626, 1753
BssMI	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
BssT1I	CCWWGG	2 cut(s)	314, 1626
Bst2UI	CCWGG	3 cut(s)	729, 1581, 1755
Bst4CI	ACNGT	5 cut(s)	156, 539, 848, 1174, 2082
Bst6I	CTCTTC	1 cut(s)	1247
BstAPI	GCANNNNNTGC	2 cut(s)	1594, 2084
BstC8I	GCNNGC	3 cut(s)	718, 1431, 1918
BstDSI	CCRYGG	1 cut(s)	1626
BstENI	CCTNNNNNAGG	1 cut(s)	1830
BstF5I	GGATG	7 cut(s)	30, 256, 304, 779, 1492, 1680, 1797
BstFNI	CGCG	1 cut(s)	681
BstHHI	GCGC	1 cut(s)	1435
BstKTI	GATC	7 cut(s)	432, 566, 605, 632, 754, 1010, 1802
BstMAI	GTCTC	2 cut(s)	729, 1262
BstMBI	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
BstMCI	CGRYCG	1 cut(s)	432
BstMWI	GCNNNNNNNGC	9 cut(s)	401, 687, 821, 1594, 1726, 1735, 1865, 1926, 2084
BstNI	CCWGG	3 cut(s)	729, 1581, 1755
BstNSI	RCATGY	3 cut(s)	310, 1086, 1597
BstSCI	CCNGG	3 cut(s)	727, 1579, 1753
BstSFI	CTRYAG	3 cut(s)	714, 1436, 1902
BstSLI	GKGCMC	4 cut(s)	967, 1731, 1776, 1861
BstUI	CGCG	1 cut(s)	681
BstV1I	GCAGC	5 cut(s)	610, 802, 898, 1382, 2025
BstV2I	GAAGAC	1 cut(s)	1514
BstX2I	RGATCY	4 cut(s)	563, 751, 1007, 1799
BstYI	RGATCY	4 cut(s)	563, 751, 1007, 1799
Bsu15I	ATCGAT	2 cut(s)	428, 432
BsuI	GTATCC	1 cut(s)	637
BsuRI	GGCC	3 cut(s)	29, 748, 2055
BsuTUI	ATCGAT	2 cut(s)	428, 432
BtgI	CCRYGG	1 cut(s)	1626
BtgZI	GCGATG	3 cut(s)	579, 662, 2018
BtsCI	GGATG	7 cut(s)	30, 256, 304, 779, 1492, 1680, 1797
BtsIMutI	CAGTG	3 cut(s)	273, 1018, 1848
BveI	ACCTGC	1 cut(s)	1871
Cac8I	GCNNGC	3 cut(s)	718, 1431, 1918
CaiI	CAGNNNCTG	1 cut(s)	1964
CciI	TCATGA	1 cut(s)	349
CfoI	GCGC	1 cut(s)	1435
Cfr13I	GGNCC	5 cut(s)	1601, 1883, 1907, 1931, 2053
ClaI	ATCGAT	2 cut(s)	428, 432
CseI	GACGC	2 cut(s)	600, 1519
Csp6I	GTAC	2 cut(s)	355, 1059
CviQI	GTAC	2 cut(s)	355, 1059
DpnI	GATC	7 cut(s)	431, 565, 604, 631, 753, 1009, 1801
DpnII	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
DrdI	GACNNNNNNGTC	1 cut(s)	1276
DseDI	GACNNNNNNGTC	1 cut(s)	1276
EaeI	YGGCCR	1 cut(s)	27
Eam1104I	CTCTTC	1 cut(s)	1247
EarI	CTCTTC	1 cut(s)	1247
EciI	GGCGGA	1 cut(s)	1944
Ecl136II	GAGCTC	1 cut(s)	1334
Eco130I	CCWWGG	2 cut(s)	314, 1626
Eco24I	GRGCYC	1 cut(s)	1336
Eco31I	GGTCTC	1 cut(s)	729
Eco47I	GGWCC	4 cut(s)	1601, 1883, 1907, 1931
Eco53kI	GAGCTC	1 cut(s)	1334
Eco57I	CTGAAG	2 cut(s)	1706, 1793
Eco88I	CYCGRG	1 cut(s)	932
EcoICRI	GAGCTC	1 cut(s)	1334
EcoNI	CCTNNNNNAGG	1 cut(s)	1830
EcoO109I	RGGNCCY	1 cut(s)	1883
EcoRI	GAATTC	1 cut(s)	694
EcoRII	CCWGG	3 cut(s)	727, 1579, 1753
EcoT14I	CCWWGG	2 cut(s)	314, 1626
EcoT22I	ATGCAT	1 cut(s)	1599
EcoT38I	GRGCYC	1 cut(s)	1336
ErhI	CCWWGG	2 cut(s)	314, 1626
FaqI	GGGAC	2 cut(s)	1421, 1869
FauI	CCCGC	2 cut(s)	713, 820
FauNDI	CATATG	1 cut(s)	1764
Fnu4HI	GCNGC	5 cut(s)	599, 816, 912, 1371, 2014
FokI	GGATG	7 cut(s)	37, 263, 311, 766, 1499, 1687, 1804
FriOI	GRGCYC	1 cut(s)	1336
Fsp4HI	GCNGC	5 cut(s)	599, 816, 912, 1371, 2014
GlaI	GCGC	1 cut(s)	1434
GluI	GCNGC	5 cut(s)	599, 816, 912, 1371, 2014
GsuI	CTGGAG	1 cut(s)	1941
HaeIII	GGCC	3 cut(s)	29, 748, 2055
HapII	CCGG	1 cut(s)	30
HgaI	GACGC	2 cut(s)	600, 1519
HhaI	GCGC	1 cut(s)	1435
Hin6I	GCGC	1 cut(s)	1433
HinP1I	GCGC	1 cut(s)	1433
HincII	GTYRAC	1 cut(s)	2122
HindII	GTYRAC	1 cut(s)	2122
HindIII	AAGCTT	2 cut(s)	1245, 1473
HpaI	GTTAAC	1 cut(s)	2122
HpaII	CCGG	1 cut(s)	30
HphI	GGTGA	2 cut(s)	665, 1175
Hpy166II	GTNNAC	5 cut(s)	790, 965, 1468, 1760, 2122
Hpy188III	TCNNGA	8 cut(s)	50, 71, 179, 243, 350, 807, 1046, 1265
Hpy8I	GTNNAC	5 cut(s)	790, 965, 1468, 1760, 2122
Hpy99I	CGWCG	1 cut(s)	616
HpyAV	CCTTC	5 cut(s)	27, 485, 1398, 1792, 1817
HpyCH4III	ACNGT	5 cut(s)	156, 539, 848, 1174, 2082
HpyCH4IV	ACGT	1 cut(s)	1855
HpyF10VI	GCNNNNNNNGC	9 cut(s)	401, 687, 821, 1594, 1726, 1735, 1865, 1926, 2084
HpySE526I	ACGT	1 cut(s)	1855
HspAI	GCGC	1 cut(s)	1433
KspAI	GTTAAC	1 cut(s)	2122
Kzo9I	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
LmnI	GCTCC	6 cut(s)	1177, 1331, 1544, 1742, 1873, 1960
Lsp1109I	GCAGC	5 cut(s)	610, 802, 898, 1382, 2025
LweI	GCATC	6 cut(s)	93, 434, 1416, 1709, 1839, 1995
MaeII	ACGT	1 cut(s)	1855
MaeIII	GTNAC	3 cut(s)	920, 1572, 1709
MalI	GATC	7 cut(s)	431, 565, 604, 631, 753, 1009, 1801
MboI	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
MboII	GAAGA	9 cut(s)	142, 267, 1185, 1264, 1319, 1336, 1435, 1519, 1695
MfeI	CAATTG	1 cut(s)	1453
MflI	RGATCY	4 cut(s)	563, 751, 1007, 1799
MhlI	GDGCHC	6 cut(s)	967, 1336, 1731, 1747, 1776, 1861
MlyI	GAGTC	3 cut(s)	944, 983, 1286
MmeI	TCCRAC	1 cut(s)	1615
Mph1103I	ATGCAT	1 cut(s)	1599
MseI	TTAA	3 cut(s)	144, 162, 2121
MslI	CAYNNNNRTG	5 cut(s)	492, 681, 1293, 1319, 1596
MspA1I	CMGCKG	2 cut(s)	815, 911
MspI	CCGG	1 cut(s)	30
MspR9I	CCNGG	3 cut(s)	729, 1581, 1755
MunI	CAATTG	1 cut(s)	1453
Mva1269I	GAATGC	2 cut(s)	1289, 1590
MvaI	CCWGG	3 cut(s)	729, 1581, 1755
MvnI	CGCG	1 cut(s)	681
MwoI	GCNNNNNNNGC	9 cut(s)	401, 687, 821, 1594, 1726, 1735, 1865, 1926, 2084
NcoI	CCATGG	1 cut(s)	1626
NdeI	CATATG	1 cut(s)	1764
NdeII	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
NlaIV	GGNNCC	7 cut(s)	528, 1053, 1179, 1354, 1603, 1728, 1885
NsiI	ATGCAT	1 cut(s)	1599
NspI	RCATGY	3 cut(s)	310, 1086, 1597
PagI	TCATGA	1 cut(s)	349
PciI	ACATGT	1 cut(s)	306
PctI	GAATGC	2 cut(s)	1289, 1590
PflMI	CCANNNNNTGG	1 cut(s)	1964
PfoI	TCCNGGA	1 cut(s)	727
PkrI	GCNGC	5 cut(s)	600, 817, 913, 1372, 2015
Ple19I	CGATCG	1 cut(s)	432
PleI	GAGTC	3 cut(s)	943, 982, 1285
PpsI	GAGTC	3 cut(s)	943, 982, 1285
PpuMI	RGGWCCY	1 cut(s)	1883
PscI	ACATGT	1 cut(s)	306
Psp124BI	GAGCTC	1 cut(s)	1336
Psp5II	RGGWCCY	1 cut(s)	1883
Psp6I	CCWGG	3 cut(s)	727, 1579, 1753
PspGI	CCWGG	3 cut(s)	727, 1579, 1753
PspN4I	GGNNCC	7 cut(s)	528, 1053, 1179, 1354, 1603, 1728, 1885
PspPI	GGNCC	5 cut(s)	1601, 1883, 1907, 1931, 2053
PspPPI	RGGWCCY	1 cut(s)	1883
PstI	CTGCAG	2 cut(s)	718, 1906
PstNI	CAGNNNCTG	1 cut(s)	1964
PsuI	RGATCY	4 cut(s)	563, 751, 1007, 1799
PvuI	CGATCG	1 cut(s)	432
PvuII	CAGCTG	1 cut(s)	911
RsaI	GTAC	2 cut(s)	356, 1060
RsaNI	GTAC	2 cut(s)	355, 1059
RseI	CAYNNNNRTG	5 cut(s)	492, 681, 1293, 1319, 1596
SacI	GAGCTC	1 cut(s)	1336
SaqAI	TTAA	3 cut(s)	144, 162, 2121
SatI	GCNGC	5 cut(s)	599, 816, 912, 1371, 2014
Sau3AI	GATC	7 cut(s)	429, 563, 602, 629, 751, 1007, 1799
Sau96I	GGNCC	5 cut(s)	1601, 1883, 1907, 1931, 2053
ScaI	AGTACT	1 cut(s)	356
SchI	GAGTC	3 cut(s)	944, 983, 1286
ScrFI	CCNGG	3 cut(s)	729, 1581, 1755
SduI	GDGCHC	6 cut(s)	967, 1336, 1731, 1747, 1776, 1861
SfaNI	GCATC	6 cut(s)	93, 434, 1416, 1709, 1839, 1995
SfcI	CTRYAG	3 cut(s)	714, 1436, 1902
SinI	GGWCC	4 cut(s)	1601, 1883, 1907, 1931
SmiMI	CAYNNNNRTG	5 cut(s)	492, 681, 1293, 1319, 1596
SmlI	CTYRAG	3 cut(s)	71, 1046, 1341
SmoI	CTYRAG	3 cut(s)	71, 1046, 1341
SpeI	ACTAGT	1 cut(s)	917
SsiI	CCGC	5 cut(s)	681, 720, 813, 1069, 1929
SstI	GAGCTC	1 cut(s)	1336
StyD4I	CCNGG	3 cut(s)	727, 1579, 1753
StyI	CCWWGG	2 cut(s)	314, 1626
TaaI	ACNGT	5 cut(s)	156, 539, 848, 1174, 2082
TaiI	ACGT	1 cut(s)	1858
TaqI	TCGA	3 cut(s)	178, 428, 432
TatI	WGTACW	2 cut(s)	354, 1058
Tru1I	TTAA	3 cut(s)	144, 162, 2121
Tru9I	TTAA	3 cut(s)	144, 162, 2121
TscAI	CASTG	3 cut(s)	273, 1018, 1848
TseI	GCWGC	5 cut(s)	598, 815, 911, 1370, 2013
TspDTI	ATGAA	6 cut(s)	267, 504, 699, 858, 2006, 2048
TspGWI	ACGGA	2 cut(s)	126, 249
TspRI	CASTG	3 cut(s)	273, 1018, 1848
Van91I	CCANNNNNTGG	1 cut(s)	1964
VneI	GTGCAC	1 cut(s)	963
VpaK11BI	GGWCC	4 cut(s)	1601, 1883, 1907, 1931
XagI	CCTNNNNNAGG	1 cut(s)	1830
XapI	RAATTY	7 cut(s)	221, 255, 377, 694, 979, 1114, 1259
XceI	RCATGY	3 cut(s)	310, 1086, 1597
XcmI	CCANNNNNNNNNTGG	1 cut(s)	850
ZrmI	AGTACT	1 cut(s)	356
Zsp2I	ATGCAT	1 cut(s)	1599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.