pycom13g00080

Intermembrane space import and assembly protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
64668 .. 66748
2081 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g00080.3

Sequence Viewer

Length: 438 bp
ATGGGTCAAGTTCAAAGCGAGGCAGCAACAGCGGATCGCCACTCTGGTTCTGGTGTCTCCTCCCCATCCTCTTCCTCTCCTTCCGTTTCCACAGACTCTCCTATTGCCGAAGCTGCAGCATATGGCAATGACGGAAATGAGTCTCTTGATGCCAAGGCTCACAAGGCACTGGAATGCCCCTGCATAGCTGACTTACGAAGTGGGCCCTGCGGACTTCAGTTTTCAGAGGCCTTTCTCTGTTATCTTAAGAGCACAGTGGAAGAAAAGGGATCGGACTGTGTGCATCCATTTGTAGTTCTGCAGAATTGTATTAAAGCTAATCCTGATGCCTTTTCTCAAGACAATTTAGAAGAAGATAAAATTAAGAAAGATGACGACTACAAAATCTACCCCCCGACATGGTCCAGAGAATCTCAAAGTCCAAAGTCCAAGCTTTAG

Protein Analysis

146

Amino Acids

15.52

Weight (kDa)

4.77

Isoelectric Point (pI)

60.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010881)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 32, 210
AclWI GGATC 2 cut(s) 42, 277
AcuI CTGAAG 1 cut(s) 200
AfiI CCNNNNNNNGG 1 cut(s) 399
AflII CTTAAG 1 cut(s) 245
AgsI TTSAA 1 cut(s) 14
AluBI AGCT 4 cut(s) 113, 188, 317, 433
AluI AGCT 4 cut(s) 113, 188, 317, 433
Alw21I GWGCWC 1 cut(s) 254
Alw26I GTCTC 2 cut(s) 61, 147
AlwI GGATC 2 cut(s) 42, 277
AoxI GGCC 2 cut(s) 203, 228
ApaI GGGCCC 1 cut(s) 207
ApeKI GCWGC 3 cut(s) 23, 113, 116
AspS9I GGNCC 3 cut(s) 203, 204, 402
AvaII GGWCC 1 cut(s) 402
BaeGI GKGCMC 1 cut(s) 207
BanII GRGCYC 1 cut(s) 207
Bbv12I GWGCWC 1 cut(s) 254
BbvI GCAGC 3 cut(s) 35, 100, 128
BccI CCATC 1 cut(s) 73
BcoDI GTCTC 2 cut(s) 61, 147
BfmI CTRYAG 2 cut(s) 114, 299
BfrI CTTAAG 1 cut(s) 245
BisI GCNGC 3 cut(s) 24, 114, 117
BlsI GCNGC 3 cut(s) 25, 115, 118
Bme18I GGWCC 1 cut(s) 402
BmgT120I GGNCC 3 cut(s) 203, 204, 402
BmiI GGNNCC 1 cut(s) 205
BmsI GCATC 3 cut(s) 139, 292, 316
BpuEI CTTGAG 1 cut(s) 321
BsaJI CCNNGG 1 cut(s) 153
BsaXI ACNNNNNCTCC 2 cut(s) 82, 112
Bsc4I CCNNNNNNNGG 1 cut(s) 399
Bse1I ACTGG 1 cut(s) 174
Bse3DI GCAATG 1 cut(s) 133
BseDI CCNNGG 1 cut(s) 153
BseGI GGATG 2 cut(s) 65, 283
BseLI CCNNNNNNNGG 1 cut(s) 399
BseMI GCAATG 1 cut(s) 133
BseNI ACTGG 1 cut(s) 174
BseRI GAGGAG 1 cut(s) 49
BseSI GKGCMC 1 cut(s) 207
BseXI GCAGC 3 cut(s) 35, 100, 128
BshFI GGCC 2 cut(s) 205, 230
BsiHKAI GWGCWC 1 cut(s) 254
BslI CCNNNNNNNGG 1 cut(s) 399
BsmAI GTCTC 2 cut(s) 61, 147
BsmI GAATGC 1 cut(s) 179
BsnI GGCC 2 cut(s) 205, 230
Bsp120I GGGCCC 1 cut(s) 203
Bsp1286I GDGCHC 2 cut(s) 207, 254
Bsp143I GATC 2 cut(s) 34, 269
BspACI CCGC 2 cut(s) 32, 210
BspANI GGCC 2 cut(s) 205, 230
BspLI GGNNCC 1 cut(s) 205
BspMAI CTGCAG 2 cut(s) 118, 303
BspPI GGATC 2 cut(s) 42, 277
BspTI CTTAAG 1 cut(s) 245
BsrDI GCAATG 1 cut(s) 133
BsrI ACTGG 1 cut(s) 174
BssECI CCNNGG 1 cut(s) 153
BssMI GATC 2 cut(s) 34, 269
BssT1I CCWWGG 1 cut(s) 153
Bst4CI ACNGT 2 cut(s) 256, 278
Bst6I CTCTTC 1 cut(s) 76
BstAFI CTTAAG 1 cut(s) 245
BstF5I GGATG 2 cut(s) 65, 283
BstKTI GATC 2 cut(s) 37, 272
BstMAI GTCTC 2 cut(s) 61, 147
BstMBI GATC 2 cut(s) 34, 269
BstMWI GCNNNNNNNGC 3 cut(s) 29, 113, 164
BstSFI CTRYAG 2 cut(s) 114, 299
BstSLI GKGCMC 1 cut(s) 207
BstV1I GCAGC 3 cut(s) 35, 100, 128
BsuRI GGCC 2 cut(s) 205, 230
BtsCI GGATG 2 cut(s) 65, 283
BtsIMutI CAGTG 2 cut(s) 167, 261
Cfr13I GGNCC 3 cut(s) 203, 204, 402
CviAII CATG 1 cut(s) 399
CviJI RGCY 7 cut(s) 113, 158, 188, 205, 230, 317, 433
CviKI_1 RGCY 7 cut(s) 113, 158, 188, 205, 230, 317, 433
DpnI GATC 2 cut(s) 36, 271
DpnII GATC 2 cut(s) 34, 269
Eam1104I CTCTTC 1 cut(s) 76
EarI CTCTTC 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 153
Eco147I AGGCCT 1 cut(s) 230
Eco24I GRGCYC 1 cut(s) 207
Eco47I GGWCC 1 cut(s) 402
Eco57I CTGAAG 1 cut(s) 200
EcoO109I RGGNCCY 1 cut(s) 204
EcoT14I CCWWGG 1 cut(s) 153
EcoT38I GRGCYC 1 cut(s) 207
ErhI CCWWGG 1 cut(s) 153
FaeI CATG 1 cut(s) 402
FaiI YATR 4 cut(s) 121, 123, 185, 400
FatI CATG 1 cut(s) 398
FauNDI CATATG 1 cut(s) 121
Fnu4HI GCNGC 3 cut(s) 24, 114, 117
FokI GGATG 2 cut(s) 52, 270
FriOI GRGCYC 1 cut(s) 207
Fsp4HI GCNGC 3 cut(s) 24, 114, 117
GluI GCNGC 3 cut(s) 24, 114, 117
HaeIII GGCC 2 cut(s) 205, 230
Hin1II CATG 1 cut(s) 402
HindIII AAGCTT 1 cut(s) 431
HinfI GANTC 3 cut(s) 95, 140, 410
Hpy188I TCNGA 2 cut(s) 226, 274
Hpy188III TCNNGA 4 cut(s) 146, 323, 338, 405
HpyAV CCTTC 1 cut(s) 90
HpyCH4III ACNGT 2 cut(s) 256, 278
HpyCH4V TGCA 4 cut(s) 116, 183, 283, 301
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 113, 164
Hsp92II CATG 1 cut(s) 402
Kzo9I GATC 2 cut(s) 34, 269
LpnPI CCDG 7 cut(s) 30, 36, 155, 193, 220, 336, 418
Lsp1109I GCAGC 3 cut(s) 35, 100, 128
LweI GCATC 3 cut(s) 139, 292, 316
MalI GATC 2 cut(s) 36, 271
MboI GATC 2 cut(s) 34, 269
MboII GAAGA 4 cut(s) 63, 272, 362, 365
MhlI GDGCHC 2 cut(s) 207, 254
MluCI AATT 3 cut(s) 304, 343, 360
MlyI GAGTC 2 cut(s) 89, 149
MnlI CCTC 5 cut(s) 13, 70, 79, 85, 220
MseI TTAA 3 cut(s) 246, 312, 363
MslI CAYNNNNRTG 1 cut(s) 172
MspA1I CMGCKG 1 cut(s) 32
MspCI CTTAAG 1 cut(s) 245
Mva1269I GAATGC 1 cut(s) 179
MwoI GCNNNNNNNGC 3 cut(s) 29, 113, 164
NdeI CATATG 1 cut(s) 121
NdeII GATC 2 cut(s) 34, 269
NlaIII CATG 1 cut(s) 402
NlaIV GGNNCC 1 cut(s) 205
PceI AGGCCT 1 cut(s) 230
PctI GAATGC 1 cut(s) 179
PfeI GAWTC 1 cut(s) 410
PflFI GACNNNGTC 1 cut(s) 400
PkrI GCNGC 3 cut(s) 25, 115, 118
PleI GAGTC 2 cut(s) 89, 148
PpsI GAGTC 2 cut(s) 89, 148
PspN4I GGNNCC 1 cut(s) 205
PspOMI GGGCCC 1 cut(s) 203
PspPI GGNCC 3 cut(s) 203, 204, 402
PstI CTGCAG 2 cut(s) 118, 303
PsyI GACNNNGTC 1 cut(s) 400
RseI CAYNNNNRTG 1 cut(s) 172
SaqAI TTAA 3 cut(s) 246, 312, 363
SatI GCNGC 3 cut(s) 24, 114, 117
Sau3AI GATC 2 cut(s) 34, 269
Sau96I GGNCC 3 cut(s) 203, 204, 402
SchI GAGTC 2 cut(s) 89, 149
SduI GDGCHC 2 cut(s) 207, 254
SetI ASST 4 cut(s) 115, 190, 319, 435
SfaNI GCATC 3 cut(s) 139, 292, 316
SfcI CTRYAG 2 cut(s) 114, 299
SinI GGWCC 1 cut(s) 402
SmiMI CAYNNNNRTG 1 cut(s) 172
SmlI CTYRAG 2 cut(s) 245, 336
SmoI CTYRAG 2 cut(s) 245, 336
Sse9I AATT 3 cut(s) 304, 343, 360
SseBI AGGCCT 1 cut(s) 230
SsiI CCGC 2 cut(s) 32, 210
StuI AGGCCT 1 cut(s) 230
StyI CCWWGG 1 cut(s) 153
TaaI ACNGT 2 cut(s) 256, 278
TasI AATT 3 cut(s) 304, 343, 360
TfiI GAWTC 1 cut(s) 410
Tru1I TTAA 3 cut(s) 246, 312, 363
Tru9I TTAA 3 cut(s) 246, 312, 363
TscAI CASTG 2 cut(s) 174, 261
TseI GCWGC 3 cut(s) 23, 113, 116
TspGWI ACGGA 2 cut(s) 73, 147
TspRI CASTG 2 cut(s) 174, 261
Tth111I GACNNNGTC 1 cut(s) 400
Vha464I CTTAAG 1 cut(s) 245
VpaK11BI GGWCC 1 cut(s) 402
XcmI CCANNNNNNNNNTGG 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.