pycom13g19140

Mitochondrial intermembrane space import and assembly protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
15175846 .. 15178255
2410 bp
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UTR
Exon/CDS
Intron
pycom13g19140.1

Sequence Viewer

Length: 252 bp
ATGGACTTCAATTTTCAGAGGCTTATCTCTGTTATCTTAAAAGCACAGTGGAAGAAAAGGGATCAGGCTGTCGAGCCATTTGTAGTTTTGCAGAATTATATTCAAGTTAATCTTTCTAAAGACAATTTAGAAGAAGATGCGATTAACAAAGATGATGACTACAAAATCCTCCCCCCAACATGGTCCAGAGAATCTCAAAGATTAACAAAGATGAACGACTACACCACTTTTTCTCTTTTCCTTTTCTTATAA

Protein Analysis

84

Amino Acids

9.98

Weight (kDa)

5.26

Isoelectric Point (pI)

44.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010881)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 250
AclWI GGATC 1 cut(s) 69
AfiI CCNNNNNNNGG 1 cut(s) 180
AgsI TTSAA 2 cut(s) 10, 104
AlwI GGATC 1 cut(s) 69
AspS9I GGNCC 1 cut(s) 183
AvaII GGWCC 1 cut(s) 183
Bme18I GGWCC 1 cut(s) 183
BmgT120I GGNCC 1 cut(s) 183
BmsI GCATC 1 cut(s) 127
Bsc4I CCNNNNNNNGG 1 cut(s) 180
BseLI CCNNNNNNNGG 1 cut(s) 180
BslI CCNNNNNNNGG 1 cut(s) 180
Bsp143I GATC 1 cut(s) 61
BspPI GGATC 1 cut(s) 69
BssMI GATC 1 cut(s) 61
Bst4CI ACNGT 1 cut(s) 48
BstKTI GATC 1 cut(s) 64
BstMBI GATC 1 cut(s) 61
BtsIMutI CAGTG 1 cut(s) 53
Cfr13I GGNCC 1 cut(s) 183
CviAII CATG 1 cut(s) 180
CviJI RGCY 3 cut(s) 22, 68, 76
CviKI_1 RGCY 3 cut(s) 22, 68, 76
DpnI GATC 1 cut(s) 63
DpnII GATC 1 cut(s) 61
Eco47I GGWCC 1 cut(s) 183
FaeI CATG 1 cut(s) 183
FaiI YATR 3 cut(s) 99, 181, 250
FalI AAGNNNNNCTT 2 cut(s) 96, 128
FatI CATG 1 cut(s) 179
Hin1II CATG 1 cut(s) 183
HinfI GANTC 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 18
Hpy188III TCNNGA 1 cut(s) 186
HpyCH4III ACNGT 1 cut(s) 48
HpyCH4V TGCA 1 cut(s) 91
Hsp92II CATG 1 cut(s) 183
Kzo9I GATC 1 cut(s) 61
LpnPI CCDG 2 cut(s) 50, 199
LweI GCATC 1 cut(s) 127
MalI GATC 1 cut(s) 63
MboI GATC 1 cut(s) 61
MboII GAAGA 3 cut(s) 64, 143, 146
MluCI AATT 3 cut(s) 10, 94, 124
MnlI CCTC 2 cut(s) 12, 179
MseI TTAA 4 cut(s) 38, 108, 144, 203
NdeII GATC 1 cut(s) 61
NlaIII CATG 1 cut(s) 183
PfeI GAWTC 1 cut(s) 191
PsiI TTATAA 1 cut(s) 250
PspPI GGNCC 1 cut(s) 183
SaqAI TTAA 4 cut(s) 38, 108, 144, 203
Sau3AI GATC 1 cut(s) 61
Sau96I GGNCC 1 cut(s) 183
SfaNI GCATC 1 cut(s) 127
SgeI CNNG 5 cut(s) 77, 85, 116, 192, 198
SinI GGWCC 1 cut(s) 183
Sse9I AATT 3 cut(s) 10, 94, 124
TaaI ACNGT 1 cut(s) 48
TaqI TCGA 1 cut(s) 72
TasI AATT 3 cut(s) 10, 94, 124
TfiI GAWTC 1 cut(s) 191
Tru1I TTAA 4 cut(s) 38, 108, 144, 203
Tru9I TTAA 4 cut(s) 38, 108, 144, 203
TscAI CASTG 1 cut(s) 53
TspDTI ATGAA 1 cut(s) 227
TspRI CASTG 1 cut(s) 53
VpaK11BI GGWCC 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.