Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005261

Physical Location & Seq

Genomic Coordinates Reverse (-)

3995738 .. 3999635

Gene Structure 3898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g06130.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGAAATTCGGGAAAGATTTCAAGAAACAAATGGTGCCTGAGTGGGCAGAAGCCTACATGGATTACAATGGTCTCAAGAGGATACTAAGGGAGCTCAGAGAATACAAGCGAAACAAGCACTCCGTAACACCCTCCAAAGACTTTGAGCGGGGACGTTCTCCCCCGCACAGAACCATCAGTGGGATTGAGCTACAATCTGGCAGTCTCCGGAGCAACGGAGATATCGAGGCCCAAGTAATCGATGTCAACACATTGCAGGGAGACGGTTGCAGAGAGGTTTACAAGACCAAGTTTCTGAGGCAATCCGAAGAAGGAGGAGATATTGAGGCGACATTCTTCCGAAAACTCGATCAAGAGCTCAACAAAGTCAATACCTTTTATAATGATAAAGTGGAGGAGGTGAAGAAAGAAGCAAATAATCTGGATAAGCAAATGGAGGCTTTGGTTGCACTGAGATTAAAAGTCAAGAAGCTTGATCAATACGGCTCTCGTTCAAGGAGACATAAAAATTCTGCAGTAGACCTGACAAGTAATAAGTCAAGTGCAGATGACAACTTAGAAAATGAGCCTATTGGTTTGACATCTGGATTGCAAGTAAATGAGGAGCATCAACGAGAACCAAGCAATGGTGGTTCAGAAGTCAATCCGAACCATGTCAAGAATTCTAGTAGCGATGGAAGAGAGTTATTGAAAACCTATACCCAAAAAGAAGATCCTATGGAGGTTCTTGAGCATGTGAGGATTACCAATACGCTTGAATCTCCAATATCGACCATAAAAGGTGTTTTCAAGGACACTAAGGAAGAAGAGTTGAGCTTTGATAAAGAGGAGCTGAAGAGAGTGGAAGAACGTTTAAGAGCTGCGTTCATTCAATTTTACCACCAGCTTCAACTGCTAAAGCACTACAGTTTTATGAACCTCTCAGCATTTTCGAAGATTATGAAAAAATACGAGAAGATTGCATCAAGGAGAGCGGCCAGATCATACATGCAAATAGTAGACAACTCTAATGTTGGCAGTTCTGATGAGGTCACTAACCTGTTGGAGAGAGTGGAGACTACCTTCATACAAAAATTTTCAAACTCAAATCGCAGGGAAGGTATGAAGTCACTGAGGCCAAAAGCTAAAAGAGAGAGGCACAGTGTAACATTCTTCTCCGGTTTCTTTTCTGGCTGCTCAATTGCACTACTGGTAGCTATTGTTTTAAGAATTGAAGCTCGAAAACTACTGGATAAGGAGGAGGGTGCAGAGTACGTGGAAAACATTTTCCCACTTTACAGTTTATTTGGATACATCACTCTACATATGCTCATGTATGCTGCAGATATATATTTCTGGAGGCGTTATCGGGTCAACTATGCCTTTATATTTGGTTTCAAGAAAGGAACGGAGCTGGGGTACCGCGAAGTTTTTCTCCTTGCCACTGGTCTTGCAGTACTTTCATTGGGTGGTTTCCTGGCAAACTTACACTTGGACTTGAGTGCTGAAAAGTACAAGACAGTGACAGAATTGGTTCCCTTGGGTTTACTTGCTTTGGTCCTTGCCATCACCTTCTGCCCTTTCAAAATTATATACCATTCAAGTCGTTTCTTCTTCATTGGATCCTTGTTCCGCTGCACATGCGCCCCTCTTTACCCGGAGACATTTCCAGACTTTTTCTTGGCAGATCAGCTTACAAGCCAGGTGCAAGCGCTGAGGAGTTTTGTGTTATACGTTTGCTACTACGGTTTGGGAGAATCTTCAAGGAGGGAAATCAAGTGCCGTAGCCACGGTCTCTACAATACGTTATATTTCATTATTGCTGTCGTACCATTTTGGATGCGCTTCCTACAGGTCTCATTACATTTTAATCTTTCTAGTATGCACTTAAAGATAGCGTATCTTGTCTTGCAGTGCATTCGTCGATTCTGTGATGAGAAGGATGTGAAGTACATTTGCAATGGTTTAAAGTACTTATCAACAATCGTTGCAGTTATTATACGAACTGTTTATGAAATGAAAAAGGGAAGGACATCCTGGATGGTGTTAGCTTTGATTAGCTCAGCTGTCGCAACGACAATGAATACGTATTGGGACATTGTAATGGACTGGGGCCTTCTGCGAAAGACATCAAAGAACAAGTATTTGAGAGATAGACTTGTAGTTCCACACAAGATCGTATACTTTGCAGCCATGGTCTTGAATGTGGTATTGAGACTTGCTTGGATGCAGTTGGTGTTGGAATTTAAATTGCGTACCGTTAATAAAATGACAATAACAACTGTCATCGCCTTCCTAGAGGTCATTCGTCGTGGCATTTGGAGCTTCTTCAGGTTAGAGAACGAGCACTTGAACAATGTAGGCCAGTACCGCGCTTTCAAGTCTGTCCCTCTTCCTTTCAGTTACTACGATGAGGACGCCGACAAGGATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0012505 GO:0016020 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

805

Amino Acids

93.26

Weight (kDa)

9.25

Isoelectric Point (pI)

42.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69480 AT1G69480
fragaria_vesca	FvH4_4g30940 FvH4_4g30940 FvH4_4g30940
malus_domestica	MD00G1081200.v1.1 MD00G1081400.v1.1
prunus_persica	Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1
pyrus_communis	pycom13g06130
rosa_chinensis	RchiOBHm_Chr4g0439241 RchiOBHm_Chr4g0439281
rosa_laevigata	RLG00000006285
rosa_multiflora	Rmu_sc0006598.1_g000011 Rmu_ssc0000171.1_g000023 Rmu_ssc0000171.1_g000024
rosa_roxburghii	Rroxscaffold_5G00380240
rosa_rugosa	Rorug04G0317200
rosa_samantha	Rh4AG367800 Rh4AG367900 Rh4BG379700 Rh4CG394000 Rh4DG374200
rosa_wichuraiana	Rw0G005610 Rw0G011620 Rw5G028560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	381
Acc65I	GGTACC	1 cut(s)	1398
AccB1I	GGYRCC	2 cut(s)	34, 1398
AccB7I	CCANNNNNTGG	1 cut(s)	626
AccBSI	CCGCTC	2 cut(s)	148, 974
AccI	GTMKAC	3 cut(s)	519, 999, 2160
AccII	CGCG	2 cut(s)	1404, 2352
AccIII	TCCGGA	1 cut(s)	207
AciI	CCGC	6 cut(s)	148, 164, 974, 1402, 1612, 2350
AclI	AACGTT	1 cut(s)	850
AclWI	GGATC	3 cut(s)	707, 1596, 1609
AcoI	YGGCCR	1 cut(s)	975
AcsI	RAATTY	5 cut(s)	5, 508, 661, 1073, 2222
AcuI	CTGAAG	2 cut(s)	854, 2293
AcyI	GRCGYC	1 cut(s)	2397
AfaI	GTAC	9 cut(s)	1253, 1400, 1437, 1493, 1809, 1931, 1952, 2236, 2348
AfeI	AGCGCT	1 cut(s)	1692
AfiI	CCNNNNNNNGG	2 cut(s)	180, 626
AjnI	CCWGG	3 cut(s)	1455, 1680, 2015
Alw21I	GWGCWC	3 cut(s)	96, 360, 2328
Alw26I	GTCTC	9 cut(s)	77, 209, 255, 493, 1049, 1634, 1778, 1840, 2188
AlwI	GGATC	3 cut(s)	707, 1596, 1609
Aor13HI	TCCGGA	1 cut(s)	207
Aor51HI	AGCGCT	1 cut(s)	1692
AoxI	GGCC	5 cut(s)	228, 975, 1115, 2092, 2341
ApeKI	GCWGC	5 cut(s)	860, 1173, 1319, 1614, 2168
ApoI	RAATTY	5 cut(s)	5, 508, 661, 1073, 2222
Asp700I	GAANNNNTTC	3 cut(s)	17, 1410, 1512
Asp718I	GGTACC	1 cut(s)	1398
AspLEI	GCGC	4 cut(s)	1625, 1693, 1824, 2354
AspS9I	GGNCC	3 cut(s)	229, 1537, 2092
AsuC2I	CCSGG	1 cut(s)	1637
AsuHPI	GGTGA	2 cut(s)	412, 1540
AsuII	TTCGAA	1 cut(s)	932
AvaII	GGWCC	1 cut(s)	1537
BamHI	GGATCC	1 cut(s)	1601
BanI	GGYRCC	2 cut(s)	34, 1398
BanII	GRGCYC	2 cut(s)	96, 360
Bbv12I	GWGCWC	3 cut(s)	96, 360, 2328
BbvCI	CCTCAGC	1 cut(s)	1694
BbvI	GCAGC	5 cut(s)	847, 1160, 1306, 1601, 2180
BccI	CCATC	4 cut(s)	182, 668, 1553, 2014
BceAI	ACGGC	2 cut(s)	499, 1746
BcgI	CGANNNNNNTGC	4 cut(s)	941, 975, 1880, 1914
BciT130I	CCWGG	3 cut(s)	1457, 1682, 2017
BciVI	GTATCC	2 cut(s)	75, 1283
BclI	TGATCA	1 cut(s)	475
BcnI	CCSGG	1 cut(s)	1637
BcoDI	GTCTC	9 cut(s)	77, 209, 255, 493, 1049, 1634, 1778, 1840, 2188
BfaI	CTAG	3 cut(s)	666, 1857, 2276
BfmI	CTRYAG	4 cut(s)	513, 904, 1320, 1829
BfoI	RGCGCY	1 cut(s)	1694
BfuI	GTATCC	2 cut(s)	75, 1283
BisI	GCNGC	6 cut(s)	861, 975, 1174, 1320, 1615, 2169
BlpI	GCTNAGC	1 cut(s)	2041
BlsI	GCNGC	6 cut(s)	862, 976, 1175, 1321, 1616, 2170
BmcAI	AGTACT	2 cut(s)	1437, 1952
Bme1390I	CCNGG	4 cut(s)	1457, 1637, 1682, 2017
Bme18I	GGWCC	1 cut(s)	1537
BmgT120I	GGNCC	3 cut(s)	229, 1537, 2092
BmiI	GGNNCC	5 cut(s)	36, 1400, 1515, 1603, 2093
BmrFI	CCNGG	4 cut(s)	1457, 1637, 1682, 2017
BmrI	ACTGGG	1 cut(s)	2098
BmsI	GCATC	4 cut(s)	616, 971, 1809, 2196
BmuI	ACTGGG	1 cut(s)	2098
BpmI	CTGGAG	1 cut(s)	1357
Bpu10I	CCTNAGC	1 cut(s)	1694
Bpu1102I	GCTNAGC	1 cut(s)	2041
Bpu14I	TTCGAA	1 cut(s)	932
BpuEI	CTTGAG	3 cut(s)	59, 749, 1498
BpuMI	CCSGG	1 cut(s)	1637
Bsa29I	ATCGAT	1 cut(s)	240
BsaAI	YACGTR	2 cut(s)	1255, 2067
BsaHI	GRCGYC	1 cut(s)	2397
BsaI	GGTCTC	3 cut(s)	77, 1778, 1840
BsaJI	CCNNGG	3 cut(s)	1518, 1768, 2172
BsaWI	WCCGGW	2 cut(s)	207, 1157
BsaXI	ACNNNNNCTCC	4 cut(s)	104, 134, 1382, 1412
Bsc4I	CCNNNNNNNGG	2 cut(s)	180, 626
Bse1I	ACTGG	5 cut(s)	1194, 1233, 1429, 2093, 2344
Bse3DI	GCAATG	3 cut(s)	251, 631, 1945
BseAI	TCCGGA	1 cut(s)	207
BseBI	CCWGG	3 cut(s)	1457, 1682, 2017
BseCI	ATCGAT	1 cut(s)	240
BseDI	CCNNGG	3 cut(s)	1518, 1768, 2172
BseGI	GGATG	6 cut(s)	1824, 1927, 2012, 2025, 2211, 2413
BseLI	CCNNNNNNNGG	2 cut(s)	180, 626
BseMI	GCAATG	3 cut(s)	251, 631, 1945
BseMII	CTCAG	8 cut(s)	30, 109, 287, 443, 936, 1103, 1685, 2055
BseNI	ACTGG	5 cut(s)	1194, 1233, 1429, 2093, 2344
BseRI	GAGGAG	6 cut(s)	330, 410, 617, 842, 1253, 1711
BseXI	GCAGC	5 cut(s)	847, 1160, 1306, 1601, 2180
BseYI	CCCAGC	1 cut(s)	1393
BsgI	GTGCAG	3 cut(s)	564, 1266, 1600
Bsh1236I	CGCG	2 cut(s)	1404, 2352
BshFI	GGCC	5 cut(s)	230, 977, 1117, 2094, 2343
BshNI	GGYRCC	2 cut(s)	34, 1398
BshVI	ATCGAT	1 cut(s)	240
BsiHKAI	GWGCWC	3 cut(s)	96, 360, 2328
BsiSI	CCGG	3 cut(s)	208, 1158, 1637
BslFI	GGGAC	3 cut(s)	165, 2087, 2351
BslI	CCNNNNNNNGG	2 cut(s)	180, 626
BsmAI	GTCTC	9 cut(s)	77, 209, 255, 493, 1049, 1634, 1778, 1840, 2188
BsmBI	CGTCTC	1 cut(s)	255
BsmFI	GGGAC	3 cut(s)	165, 2087, 2351
BsmI	GAATGC	1 cut(s)	1896
BsnI	GGCC	5 cut(s)	230, 977, 1117, 2094, 2343
Bso31I	GGTCTC	3 cut(s)	77, 1778, 1840
Bsp119I	TTCGAA	1 cut(s)	932
Bsp1286I	GDGCHC	3 cut(s)	96, 360, 2328
Bsp13I	TCCGGA	1 cut(s)	207
Bsp143I	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
Bsp1720I	GCTNAGC	1 cut(s)	2041
Bsp19I	CCATGG	1 cut(s)	2172
BspACI	CCGC	6 cut(s)	148, 164, 974, 1402, 1612, 2350
BspANI	GGCC	5 cut(s)	230, 977, 1117, 2094, 2343
BspCNI	CTCAG	8 cut(s)	31, 108, 288, 444, 935, 1104, 1686, 2054
BspDI	ATCGAT	1 cut(s)	240
BspEI	TCCGGA	1 cut(s)	207
BspFNI	CGCG	2 cut(s)	1404, 2352
BspLI	GGNNCC	5 cut(s)	36, 1400, 1515, 1603, 2093
BspMAI	CTGCAG	2 cut(s)	517, 1324
BspPI	GGATC	3 cut(s)	707, 1596, 1609
BspT104I	TTCGAA	1 cut(s)	932
BspT107I	GGYRCC	2 cut(s)	34, 1398
BspTNI	GGTCTC	3 cut(s)	77, 1778, 1840
BsrBI	CCGCTC	2 cut(s)	148, 974
BsrDI	GCAATG	3 cut(s)	251, 631, 1945
BsrI	ACTGG	5 cut(s)	1194, 1233, 1429, 2093, 2344
BssECI	CCNNGG	3 cut(s)	1518, 1768, 2172
BssMI	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
BssNAI	GTATAC	1 cut(s)	2161
BssNI	GRCGYC	1 cut(s)	2397
BssT1I	CCWWGG	2 cut(s)	1518, 2172
Bst1107I	GTATAC	1 cut(s)	2161
Bst2UI	CCWGG	3 cut(s)	1457, 1682, 2017
Bst6I	CTCTTC	4 cut(s)	673, 801, 830, 2376
BstACI	GRCGYC	1 cut(s)	2397
BstBAI	YACGTR	2 cut(s)	1255, 2067
BstBI	TTCGAA	1 cut(s)	932
BstC8I	GCNNGC	1 cut(s)	1689
BstDSI	CCRYGG	2 cut(s)	1768, 2172
BstF5I	GGATG	6 cut(s)	1824, 1927, 2012, 2025, 2211, 2413
BstFNI	CGCG	2 cut(s)	1404, 2352
BstH2I	RGCGCY	1 cut(s)	1694
BstHHI	GCGC	4 cut(s)	1625, 1693, 1824, 2354
BstKTI	GATC	7 cut(s)	352, 478, 715, 983, 1604, 1669, 2157
BstMAI	GTCTC	9 cut(s)	77, 209, 255, 493, 1049, 1634, 1778, 1840, 2188
BstMBI	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
BstMWI	GCNNNNNNNGC	6 cut(s)	115, 446, 892, 1620, 2301, 2349
BstNI	CCWGG	3 cut(s)	1457, 1682, 2017
BstNSI	RCATGY	3 cut(s)	737, 991, 1623
BstSCI	CCNGG	4 cut(s)	1455, 1635, 1680, 2015
BstSFI	CTRYAG	4 cut(s)	513, 904, 1320, 1829
BstSNI	TACGTA	1 cut(s)	2067
BstUI	CGCG	2 cut(s)	1404, 2352
BstV1I	GCAGC	5 cut(s)	847, 1160, 1306, 1601, 2180
BstX2I	RGATCY	2 cut(s)	712, 1601
BstYI	RGATCY	2 cut(s)	712, 1601
BstZ17I	GTATAC	1 cut(s)	2161
Bsu15I	ATCGAT	1 cut(s)	240
BsuI	GTATCC	2 cut(s)	75, 1283
BsuRI	GGCC	5 cut(s)	230, 977, 1117, 2094, 2343
BsuTUI	ATCGAT	1 cut(s)	240
BtgI	CCRYGG	2 cut(s)	1768, 2172
BtgZI	GCGATG	2 cut(s)	687, 2251
BtsCI	GGATG	6 cut(s)	1824, 1927, 2012, 2025, 2211, 2413
BtsI	GCAGTG	1 cut(s)	1898
BtsIMutI	CAGTG	7 cut(s)	184, 449, 1109, 1147, 1422, 1506, 1898
Cac8I	GCNNGC	1 cut(s)	1689
CfoI	GCGC	4 cut(s)	1625, 1693, 1824, 2354
Cfr13I	GGNCC	3 cut(s)	229, 1537, 2092
ClaI	ATCGAT	1 cut(s)	240
CseI	GACGC	1 cut(s)	2405
Csp6I	GTAC	9 cut(s)	1252, 1399, 1436, 1492, 1808, 1930, 1951, 2235, 2347
CspCI	CAANNNNNGTGG	2 cut(s)	1411, 1446
CviAII	CATG	7 cut(s)	58, 653, 734, 988, 1312, 1620, 2173
CviQI	GTAC	9 cut(s)	1252, 1399, 1436, 1492, 1808, 1930, 1951, 2235, 2347
DpnI	GATC	7 cut(s)	351, 477, 714, 982, 1603, 1668, 2156
DpnII	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
DraI	TTTAAA	2 cut(s)	1947, 2227
EaeI	YGGCCR	1 cut(s)	975
Eam1104I	CTCTTC	4 cut(s)	673, 801, 830, 2376
EarI	CTCTTC	4 cut(s)	673, 801, 830, 2376
Ecl136II	GAGCTC	2 cut(s)	94, 358
Eco105I	TACGTA	1 cut(s)	2067
Eco130I	CCWWGG	2 cut(s)	1518, 2172
Eco24I	GRGCYC	2 cut(s)	96, 360
Eco31I	GGTCTC	3 cut(s)	77, 1778, 1840
Eco32I	GATATC	1 cut(s)	223
Eco47I	GGWCC	1 cut(s)	1537
Eco47III	AGCGCT	1 cut(s)	1692
Eco53kI	GAGCTC	2 cut(s)	94, 358
Eco57I	CTGAAG	2 cut(s)	854, 2293
EcoICRI	GAGCTC	2 cut(s)	94, 358
EcoO109I	RGGNCCY	1 cut(s)	2092
EcoRI	GAATTC	1 cut(s)	661
EcoRII	CCWGG	3 cut(s)	1455, 1680, 2015
EcoRV	GATATC	1 cut(s)	223
EcoT14I	CCWWGG	2 cut(s)	1518, 2172
EcoT38I	GRGCYC	2 cut(s)	96, 360
ErhI	CCWWGG	2 cut(s)	1518, 2172
Esp3I	CGTCTC	1 cut(s)	255
FaeI	CATG	7 cut(s)	61, 656, 737, 991, 1315, 1623, 2176
FaqI	GGGAC	3 cut(s)	165, 2087, 2351
FatI	CATG	7 cut(s)	57, 652, 733, 987, 1311, 1619, 2172
FauI	CCCGC	2 cut(s)	141, 171
FauNDI	CATATG	1 cut(s)	1305
FbaI	TGATCA	1 cut(s)	475
FblI	GTMKAC	3 cut(s)	519, 999, 2160
Fnu4HI	GCNGC	6 cut(s)	861, 975, 1174, 1320, 1615, 2169
FokI	GGATG	5 cut(s)	1831, 1934, 1999, 2032, 2218
FriOI	GRGCYC	2 cut(s)	96, 360
Fsp4HI	GCNGC	6 cut(s)	861, 975, 1174, 1320, 1615, 2169
FspBI	CTAG	3 cut(s)	666, 1857, 2276
GlaI	GCGC	4 cut(s)	1624, 1692, 1823, 2353
GluI	GCNGC	6 cut(s)	861, 975, 1174, 1320, 1615, 2169
GsaI	CCCAGC	1 cut(s)	1397
GsuI	CTGGAG	1 cut(s)	1357
HaeII	RGCGCY	1 cut(s)	1694
HaeIII	GGCC	5 cut(s)	230, 977, 1117, 2094, 2343
HapII	CCGG	3 cut(s)	208, 1158, 1637
HgaI	GACGC	1 cut(s)	2405
HhaI	GCGC	4 cut(s)	1625, 1693, 1824, 2354
Hin1I	GRCGYC	1 cut(s)	2397
Hin1II	CATG	7 cut(s)	61, 656, 737, 991, 1315, 1623, 2176
Hin6I	GCGC	4 cut(s)	1623, 1691, 1822, 2352
HinP1I	GCGC	4 cut(s)	1623, 1691, 1822, 2352
HincII	GTYRAC	2 cut(s)	247, 1354
HindII	GTYRAC	2 cut(s)	247, 1354
HindIII	AAGCTT	1 cut(s)	470
HinfI	GANTC	3 cut(s)	758, 1736, 1905
HpaII	CCGG	3 cut(s)	208, 1158, 1637
HphI	GGTGA	2 cut(s)	412, 1540
Hpy166II	GTNNAC	7 cut(s)	247, 280, 520, 1000, 1354, 1526, 2161
Hpy188I	TCNGA	7 cut(s)	98, 297, 307, 341, 637, 648, 1024
Hpy8I	GTNNAC	7 cut(s)	247, 280, 520, 1000, 1354, 1526, 2161
Hpy99I	CGWCG	2 cut(s)	1905, 2292
HpyAV	CCTTC	8 cut(s)	305, 1072, 1091, 1561, 1912, 2001, 2105, 2281
HpyCH4IV	ACGT	6 cut(s)	154, 850, 1254, 1713, 1784, 2066
HpyF10VI	GCNNNNNNNGC	6 cut(s)	115, 446, 892, 1620, 2301, 2349
HpySE526I	ACGT	6 cut(s)	154, 850, 1254, 1713, 1784, 2066
Hsp92I	GRCGYC	1 cut(s)	2397
Hsp92II	CATG	7 cut(s)	61, 656, 737, 991, 1315, 1623, 2176
HspAI	GCGC	4 cut(s)	1623, 1691, 1822, 2352
Kpn2I	TCCGGA	1 cut(s)	207
KpnI	GGTACC	1 cut(s)	1402
Ksp22I	TGATCA	1 cut(s)	475
Kzo9I	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
LmnI	GCTCC	6 cut(s)	91, 210, 604, 829, 1390, 2301
Lsp1109I	GCAGC	5 cut(s)	847, 1160, 1306, 1601, 2180
LweI	GCATC	4 cut(s)	616, 971, 1809, 2196
MaeI	CTAG	3 cut(s)	666, 1857, 2276
MaeII	ACGT	6 cut(s)	154, 850, 1254, 1713, 1784, 2066
MaeIII	GTNAC	6 cut(s)	124, 1030, 1107, 1144, 1501, 2381
MalI	GATC	7 cut(s)	351, 477, 714, 982, 1603, 1668, 2156
MbiI	CCGCTC	2 cut(s)	148, 974
MboI	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
MfeI	CAATTG	1 cut(s)	1179
MflI	RGATCY	2 cut(s)	712, 1601
MhlI	GDGCHC	3 cut(s)	96, 360, 2328
MmeI	TCCRAC	2 cut(s)	1023, 2199
MroI	TCCGGA	1 cut(s)	207
MroXI	GAANNNNTTC	3 cut(s)	17, 1410, 1512
MseI	TTAA	8 cut(s)	458, 854, 1205, 1848, 1868, 1946, 2226, 2241
MslI	CAYNNNNRTG	1 cut(s)	2081
MspA1I	CMGCKG	2 cut(s)	1614, 2045
MspI	CCGG	3 cut(s)	208, 1158, 1637
MspR9I	CCNGG	4 cut(s)	1457, 1637, 1682, 2017
MunI	CAATTG	1 cut(s)	1179
Mva1269I	GAATGC	1 cut(s)	1896
MvaI	CCWGG	3 cut(s)	1457, 1682, 2017
MvnI	CGCG	2 cut(s)	1404, 2352
MwoI	GCNNNNNNNGC	6 cut(s)	115, 446, 892, 1620, 2301, 2349
NciI	CCSGG	1 cut(s)	1637
NcoI	CCATGG	1 cut(s)	2172
NdeI	CATATG	1 cut(s)	1305
NdeII	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
NlaIII	CATG	7 cut(s)	61, 656, 737, 991, 1315, 1623, 2176
NlaIV	GGNNCC	5 cut(s)	36, 1400, 1515, 1603, 2093
NmuCI	GTSAC	3 cut(s)	1030, 1107, 1501
NspI	RCATGY	3 cut(s)	737, 991, 1623
NspV	TTCGAA	1 cut(s)	932
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PctI	GAATGC	1 cut(s)	1896
PdmI	GAANNNNTTC	3 cut(s)	17, 1410, 1512
PfeI	GAWTC	3 cut(s)	758, 1736, 1905
PflMI	CCANNNNNTGG	1 cut(s)	626
PfoI	TCCNGGA	1 cut(s)	2015
PkrI	GCNGC	6 cut(s)	862, 976, 1175, 1321, 1616, 2170
Ppu21I	YACGTR	2 cut(s)	1255, 2067
PsiI	TTATAA	1 cut(s)	381
Psp124BI	GAGCTC	2 cut(s)	96, 360
Psp1406I	AACGTT	1 cut(s)	850
Psp6I	CCWGG	3 cut(s)	1455, 1680, 2015
PspFI	CCCAGC	1 cut(s)	1393
PspGI	CCWGG	3 cut(s)	1455, 1680, 2015
PspN4I	GGNNCC	5 cut(s)	36, 1400, 1515, 1603, 2093
PspPI	GGNCC	3 cut(s)	229, 1537, 2092
PstI	CTGCAG	2 cut(s)	517, 1324
PsuI	RGATCY	2 cut(s)	712, 1601
PvuII	CAGCTG	1 cut(s)	2045
RsaI	GTAC	9 cut(s)	1253, 1400, 1437, 1493, 1809, 1931, 1952, 2236, 2348
RsaNI	GTAC	9 cut(s)	1252, 1399, 1436, 1492, 1808, 1930, 1951, 2235, 2347
RseI	CAYNNNNRTG	1 cut(s)	2081
SacI	GAGCTC	2 cut(s)	96, 360
SaqAI	TTAA	8 cut(s)	458, 854, 1205, 1848, 1868, 1946, 2226, 2241
SatI	GCNGC	6 cut(s)	861, 975, 1174, 1320, 1615, 2169
Sau3AI	GATC	7 cut(s)	349, 475, 712, 980, 1601, 1666, 2154
Sau96I	GGNCC	3 cut(s)	229, 1537, 2092
ScaI	AGTACT	2 cut(s)	1437, 1952
ScrFI	CCNGG	4 cut(s)	1457, 1637, 1682, 2017
SduI	GDGCHC	3 cut(s)	96, 360, 2328
SfaNI	GCATC	4 cut(s)	616, 971, 1809, 2196
SfcI	CTRYAG	4 cut(s)	513, 904, 1320, 1829
SfuI	TTCGAA	1 cut(s)	932
SinI	GGWCC	1 cut(s)	1537
SmiI	ATTTAAAT	1 cut(s)	2227
SmiMI	CAYNNNNRTG	1 cut(s)	2081
SmlI	CTYRAG	3 cut(s)	74, 728, 1477
SmoI	CTYRAG	3 cut(s)	74, 728, 1477
SnaBI	TACGTA	1 cut(s)	2067
SsiI	CCGC	6 cut(s)	148, 164, 974, 1402, 1612, 2350
SspMI	CTAG	3 cut(s)	666, 1857, 2276
SstI	GAGCTC	2 cut(s)	96, 360
StyD4I	CCNGG	4 cut(s)	1455, 1635, 1680, 2015
StyI	CCWWGG	2 cut(s)	1518, 2172
SwaI	ATTTAAAT	1 cut(s)	2227
TaiI	ACGT	6 cut(s)	157, 853, 1257, 1716, 1787, 2069
TaqI	TCGA	7 cut(s)	225, 240, 348, 770, 932, 1219, 1903
TatI	WGTACW	4 cut(s)	1435, 1491, 1929, 1950
TauI	GCSGC	1 cut(s)	977
TfiI	GAWTC	3 cut(s)	758, 1736, 1905
Tru1I	TTAA	8 cut(s)	458, 854, 1205, 1848, 1868, 1946, 2226, 2241
Tru9I	TTAA	8 cut(s)	458, 854, 1205, 1848, 1868, 1946, 2226, 2241
TscAI	CASTG	7 cut(s)	184, 456, 1116, 1147, 1429, 1506, 1898
TseFI	GTSAC	3 cut(s)	1030, 1107, 1501
TseI	GCWGC	5 cut(s)	860, 1173, 1319, 1614, 2168
Tsp45I	GTSAC	3 cut(s)	1030, 1107, 1501
TspGWI	ACGGA	3 cut(s)	112, 231, 1403
TspRI	CASTG	7 cut(s)	184, 456, 1116, 1147, 1429, 1506, 1898
Van91I	CCANNNNNTGG	1 cut(s)	626
VpaK11BI	GGWCC	1 cut(s)	1537
XapI	RAATTY	5 cut(s)	5, 508, 661, 1073, 2222
XceI	RCATGY	3 cut(s)	737, 991, 1623
XmiI	GTMKAC	3 cut(s)	519, 999, 2160
XmnI	GAANNNNTTC	3 cut(s)	17, 1410, 1512
XspI	CTAG	3 cut(s)	666, 1857, 2276
ZrmI	AGTACT	2 cut(s)	1437, 1952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.