Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0005261

Physical Location & Seq

Genomic Coordinates Reverse (-)

53441371 .. 53463796

Gene Structure 22426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG379700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGAAGTTTGGGAAGGAGTTCAAGAAACAAATGGTGCCCGGGTGGGCAGAAGCCTACATGGATTATAATGGCCTCAAGAGGATATTGCGAGAGCTAAGAGAGTACAAGCAAAGTAAGCAGCACCCTGCTGTGACATCTTCTAGAGACTTTGAGCAGAAACCGCTTCCTGACGGAACATTGAATGGAGGAGGAGATGTCGAGGACCAAGTAATAGATGTGAACACATTGCGTGGAGGTGGTTCCAAGCAGTTTTATAAGACCAAGTTCTTGAGGCCGTCAGAGGAAGGAGGAGAAATTGAGGTGACATTCTTCAGAAAACTTGACGAAGAGCTCAACAAGGTCAATACATTTTACAAGGAAAAATTGGAGGAGGTGAAGCAGGAAGCAAGTCAGTTGAATAAACAAATGGATGCTTTGGTTGCACTGAGTATTAAGATGAAGATTCCGCATCAAGATGGCTCAAGTTCAGGGAGGCATGACAATGTTGATTCTCCAATGCCTCTTACAAGGAACACAAATGCACCTGATACTTCAGGAGTTGAGCTTAGGGCATTGGAATCTGGAGTAAAAGCAAATGATAAGGATCAGCAAGAACCATGCCCTGGTGCCTCAGTTGCTGATCCACCACATGCTAACATTTCTAGAAGTGATAGCAGAGAGGTGTTGCATACCTATGACTATAGCCAAGATCCTCTGGAAATTCTTGAGGGTGTGAGAATTAATAAAACACTTGAATCTTCAATATCAACCATCAAAGGTGTTTTTAAGGACTCAAAAGAAGAGCAGTTGAGCTTTGATAAAGAGGAGCTGAGGAGAGCGGAAGAACGACCAAGGGTGGCATTTATTGAATTTTACCATAAGCTTCAACTTCTAAAGCACTACAGTTTTATGAACCTCTCTGCATTTTCCAAGATTATGAAGAAGTACGAAAAGTTCTCATCAAGGAGAGCATCCAGGTCATACATGCAAATAGTAGACAACTCTGATCTTGGAAATTCTGATGAGGTTACTAACCTCATGGAGAGGGTGGAGGCTACCTTCATCAAGAATTTTTCACACTCAAATCATAGAAAAGGTATGAAGTTACTGAGGCCAAAAGAAAAACGAGAGAAGCACAAAGTATCGTTTTTATCGGGTTTCTTTTCTGGCTGCTCAATTGCTCTACTGGTTGCTATTGTATTAAGAATACAAGCTCGAAAAATAACGAATAAGAAGGAGGGCACACAGTATATGGAAAACATTTTCCCACTTTACAGTTTATTTGGATACATTGTCCTACATTTGCTCATGTATGCTGGCGATATATACTTCTGGAGGCGTTATCGGATAAACTATCCATTTATATTTGGTTTTGAGAAAGGAACTGAGTTGAGTTACCGAGAAGTTTTCCTTCTCAGCACTGGTCTTGCAGTACTTGCATTGGGCGTTGATCCTTGCATCACCTTCTGCCCTTTCAACATCCTATACCGTTCAAGTCGTTTCTTCTTCACTCGGACCTTATTCCGCTGCATATGTGCCCCTCTTTACCCGGAGACATTCTCAGACTTTTTCTTGGCAGACCAGCTTACTAGCTTGATGCAAGCCTTGAGGAGTTTTGTGTTATACATCTGCTACTATGGTTTGGGAGAATATTCAAGGAGGCAAAGCAAGTGCCATGAGCACAGCGTCTACAATACTTTGTTTATTGTTATTGCTGTCATACCATTTTGGATGCGCTTCCTGCAGTGCATTCGTCGACTGTGTGAAGAAAAGGATTTGAAGCACTTGTGCAATGGTTTAAAGTACTTTTCGACGATTGTTGCAGTTATCGTAAGAACTGTTTATGAGCTGAAAAAAGGAAAGACCTCCTGGATGGTGTTAGCTTTGATCAGCTCTCCTGTTGCAACAAAGATGAATACATATTGGGACATTGTAGTAGACTGGGGACTTCTACAAAAGCGATCAAAGAACAAATTTTTGAGAGATAGACTTCAAGTTTCACAGAAGAGCGTGTATTTTGCAGCTATGGTCTTGAATGTAATACTCAAACTTGCTTGGATGCAGTTGGTGTTGGAATTTAGATTGCCATCCCTTCATAAAATGACAGTAACAACCATCTATGCCTGCCTAGAGATCATTCGTCGTGACATGTGGAGCTTCTTCAGGTTAGAGAATGAGCACCTAAACAATGTAGGTCAGTACCGCGCGTTCAAGTCGGTCCCTCTTCCTTTCAGTTACAATGACGAGGATGAAGACAAGGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0012505 GO:0016020 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

748

Amino Acids

86.98

Weight (kDa)

9.1

Isoelectric Point (pI)

50.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 48	2.8e-12	SPX domain
SPX	PF03105	73 - 323	1.4e-44	SPX domain
EXS	PF03124	414 - 473	3.5e-11	EXS family
EXS	PF03124	479 - 721	1e-75	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69480 AT1G69480
fragaria_vesca	FvH4_4g30940 FvH4_4g30940 FvH4_4g30940
malus_domestica	MD00G1081200.v1.1 MD00G1081400.v1.1
prunus_persica	Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1
pyrus_communis	pycom13g06130
rosa_chinensis	RchiOBHm_Chr4g0439241 RchiOBHm_Chr4g0439281
rosa_laevigata	RLG00000006285
rosa_multiflora	Rmu_sc0006598.1_g000011 Rmu_ssc0000171.1_g000023 Rmu_ssc0000171.1_g000024
rosa_roxburghii	Rroxscaffold_5G00380240
rosa_rugosa	Rorug04G0317200
rosa_samantha	Rh4AG367800 Rh4AG367900 Rh4BG379700 Rh4CG394000 Rh4DG374200
rosa_wichuraiana	Rw0G005610 Rw0G011620 Rw5G028560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	66, 255
AccB1I	GGYRCC	2 cut(s)	34, 605
AccB7I	CCANNNNNTGG	1 cut(s)	602
AccBSI	CCGCTC	1 cut(s)	818
AccI	GTMKAC	4 cut(s)	975, 1668, 1735, 1917
AccII	CGCG	2 cut(s)	2184, 2186
AciI	CCGC	5 cut(s)	161, 446, 818, 1504, 2182
AclWI	GGATC	4 cut(s)	591, 614, 683, 1424
AcsI	RAATTY	6 cut(s)	699, 848, 994, 1048, 1952, 2054
AcuI	CTGAAG	3 cut(s)	295, 516, 2125
AfaI	GTAC	5 cut(s)	104, 926, 1413, 1784, 2180
AfiI	CCNNNNNNNGG	1 cut(s)	602
AflIII	ACRYGT	1 cut(s)	2127
AjnI	CCWGG	3 cut(s)	601, 953, 1847
Alw21I	GWGCWC	3 cut(s)	333, 1662, 2160
Alw26I	GTCTC	2 cut(s)	138, 1526
AlwI	GGATC	4 cut(s)	591, 614, 683, 1424
AlwNI	CAGNNNCTG	1 cut(s)	617
Ama87I	CYCGRG	1 cut(s)	38
AoxI	GGCC	3 cut(s)	70, 272, 1091
ApeKI	GCWGC	4 cut(s)	118, 1149, 1506, 2000
ApoI	RAATTY	6 cut(s)	699, 848, 994, 1048, 1952, 2054
AseI	ATTAAT	1 cut(s)	720
Asp700I	GAANNNNTTC	1 cut(s)	17
AspLEI	GCGC	2 cut(s)	1716, 2186
AspS9I	GGNCC	3 cut(s)	202, 1494, 2197
AsuC2I	CCSGG	3 cut(s)	39, 40, 1529
AsuHPI	GGTGA	3 cut(s)	313, 385, 1432
AvaI	CYCGRG	1 cut(s)	38
AvaII	GGWCC	3 cut(s)	202, 1494, 2197
BaeGI	GKGCMC	3 cut(s)	39, 1223, 1519
BanI	GGYRCC	2 cut(s)	34, 605
BanII	GRGCYC	1 cut(s)	333
BbsI	GAAGAC	1 cut(s)	2238
Bbv12I	GWGCWC	3 cut(s)	333, 1662, 2160
BbvCI	CCTCAGC	1 cut(s)	809
BbvI	GCAGC	4 cut(s)	130, 1136, 1493, 2012
BccI	CCATC	5 cut(s)	449, 758, 1846, 2074, 2102
BceAI	ACGGC	1 cut(s)	259
BcgI	CGANNNNNNTGC	2 cut(s)	1712, 1746
BciT130I	CCWGG	3 cut(s)	603, 955, 1849
BciVI	GTATCC	1 cut(s)	1259
BclI	TGATCA	1 cut(s)	1866
BcnI	CCSGG	3 cut(s)	39, 40, 1529
BcoDI	GTCTC	2 cut(s)	138, 1526
BfaI	CTAG	4 cut(s)	141, 642, 1569, 2108
BfmI	CTRYAG	3 cut(s)	679, 880, 1721
BfuI	GTATCC	1 cut(s)	1259
BisI	GCNGC	4 cut(s)	119, 1150, 1507, 2001
BlsI	GCNGC	4 cut(s)	120, 1151, 1508, 2002
BmcAI	AGTACT	2 cut(s)	1413, 1784
Bme1390I	CCNGG	6 cut(s)	39, 40, 603, 955, 1529, 1849
Bme18I	GGWCC	3 cut(s)	202, 1494, 2197
BmeT110I	CYCGRG	1 cut(s)	38
BmgT120I	GGNCC	3 cut(s)	202, 1494, 2197
BmiI	GGNNCC	4 cut(s)	36, 241, 607, 2199
BmrFI	CCNGG	6 cut(s)	39, 40, 603, 955, 1529, 1849
BmrI	ACTGGG	1 cut(s)	1930
BmsI	GCATC	7 cut(s)	400, 457, 959, 1446, 1566, 1701, 2028
BmuI	ACTGGG	1 cut(s)	1930
BpiI	GAAGAC	1 cut(s)	2238
BplI	GAGNNNNNCTC	2 cut(s)	1523, 1555
BpmI	CTGGAG	2 cut(s)	582, 1333
Bpu10I	CCTNAGC	2 cut(s)	545, 809
BpuEI	CTTGAG	5 cut(s)	59, 289, 445, 725, 1606
BpuMI	CCSGG	3 cut(s)	39, 40, 1529
BsaBI	GATNNNNATC	2 cut(s)	582, 2065
BsaJI	CCNNGG	3 cut(s)	38, 601, 830
BsaXI	ACNNNNNCTCC	2 cut(s)	180, 210
Bsc4I	CCNNNNNNNGG	1 cut(s)	602
Bse1I	ACTGG	3 cut(s)	1170, 1405, 1925
Bse3DI	GCAATG	2 cut(s)	224, 1777
Bse8I	GATNNNNATC	2 cut(s)	582, 2065
BseBI	CCWGG	3 cut(s)	603, 955, 1849
BseDI	CCNNGG	3 cut(s)	38, 601, 830
BseGI	GGATG	9 cut(s)	415, 950, 1458, 1716, 1857, 2043, 2066, 2233, 2245
BseJI	GATNNNNATC	2 cut(s)	582, 2065
BseLI	CCNNNNNNNGG	1 cut(s)	602
BseMI	GCAATG	2 cut(s)	224, 1777
BseMII	CTCAG	7 cut(s)	416, 624, 800, 1079, 1356, 1408, 1554
BseNI	ACTGG	3 cut(s)	1170, 1405, 1925
BseRI	GAGGAG	7 cut(s)	201, 204, 303, 383, 818, 826, 1603
BseSI	GKGCMC	3 cut(s)	39, 1223, 1519
BseXI	GCAGC	4 cut(s)	130, 1136, 1493, 2012
Bsh1236I	CGCG	2 cut(s)	2184, 2186
BshFI	GGCC	3 cut(s)	72, 274, 1093
BshNI	GGYRCC	2 cut(s)	34, 605
BsiHKAI	GWGCWC	3 cut(s)	333, 1662, 2160
BsiHKCI	CYCGRG	1 cut(s)	38
BsiSI	CCGG	2 cut(s)	39, 1529
BslFI	GGGAC	3 cut(s)	1919, 1938, 2183
BslI	CCNNNNNNNGG	1 cut(s)	602
BsmAI	GTCTC	2 cut(s)	138, 1526
BsmFI	GGGAC	3 cut(s)	1919, 1938, 2183
BsmI	GAATGC	1 cut(s)	1728
BsnI	GGCC	3 cut(s)	72, 274, 1093
BsoBI	CYCGRG	1 cut(s)	38
Bsp1286I	GDGCHC	6 cut(s)	39, 333, 1223, 1519, 1662, 2160
Bsp143I	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
BspACI	CCGC	5 cut(s)	161, 446, 818, 1504, 2182
BspANI	GGCC	3 cut(s)	72, 274, 1093
BspCNI	CTCAG	7 cut(s)	417, 623, 801, 1080, 1357, 1407, 1553
BspFNI	CGCG	2 cut(s)	2184, 2186
BspLI	GGNNCC	4 cut(s)	36, 241, 607, 2199
BspMAI	CTGCAG	1 cut(s)	1725
BspPI	GGATC	4 cut(s)	591, 614, 683, 1424
BspQI	GCTCTTC	3 cut(s)	321, 774, 1979
BspT107I	GGYRCC	2 cut(s)	34, 605
BsrBI	CCGCTC	1 cut(s)	818
BsrDI	GCAATG	2 cut(s)	224, 1777
BsrI	ACTGG	3 cut(s)	1170, 1405, 1925
BssECI	CCNNGG	3 cut(s)	38, 601, 830
BssMI	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
BssT1I	CCWWGG	1 cut(s)	830
Bst2UI	CCWGG	3 cut(s)	603, 955, 1849
Bst4CI	ACNGT	7 cut(s)	884, 1227, 1256, 1469, 1740, 1819, 2086
Bst6I	CTCTTC	4 cut(s)	321, 774, 1979, 2208
BstAPI	GCANNNNNTGC	1 cut(s)	1415
BstC8I	GCNNGC	3 cut(s)	1297, 1581, 2104
BstDEI	CTNAG	9 cut(s)	95, 425, 545, 610, 809, 1088, 1365, 1394, 1540
BstF5I	GGATG	9 cut(s)	415, 950, 1458, 1716, 1857, 2043, 2066, 2233, 2245
BstFNI	CGCG	2 cut(s)	2184, 2186
BstHHI	GCGC	2 cut(s)	1716, 2186
BstKTI	GATC	8 cut(s)	586, 622, 691, 988, 1432, 1869, 1943, 2115
BstMAI	GTCTC	2 cut(s)	138, 1526
BstMBI	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
BstMWI	GCNNNNNNNGC	6 cut(s)	115, 160, 419, 614, 1415, 1720
BstNI	CCWGG	3 cut(s)	603, 955, 1849
BstNSI	RCATGY	3 cut(s)	632, 967, 2131
BstSCI	CCNGG	6 cut(s)	37, 38, 601, 953, 1527, 1847
BstSFI	CTRYAG	3 cut(s)	679, 880, 1721
BstSLI	GKGCMC	3 cut(s)	39, 1223, 1519
BstUI	CGCG	2 cut(s)	2184, 2186
BstV1I	GCAGC	4 cut(s)	130, 1136, 1493, 2012
BstV2I	GAAGAC	1 cut(s)	2238
BstX2I	RGATCY	1 cut(s)	688
BstYI	RGATCY	1 cut(s)	688
BsuI	GTATCC	1 cut(s)	1259
BsuRI	GGCC	3 cut(s)	72, 274, 1093
BtsCI	GGATG	9 cut(s)	415, 950, 1458, 1716, 1857, 2043, 2066, 2233, 2245
BtsI	GCAGTG	1 cut(s)	1730
BtsIMutI	CAGTG	3 cut(s)	422, 1398, 1730
Cac8I	GCNNGC	3 cut(s)	1297, 1581, 2104
CaiI	CAGNNNCTG	1 cut(s)	617
CfoI	GCGC	2 cut(s)	1716, 2186
Cfr13I	GGNCC	3 cut(s)	202, 1494, 2197
Cfr9I	CCCGGG	1 cut(s)	38
CseI	GACGC	1 cut(s)	1654
Csp6I	GTAC	5 cut(s)	103, 925, 1412, 1783, 2179
CviAII	CATG	9 cut(s)	58, 476, 597, 629, 964, 1018, 1288, 1655, 2128
CviQI	GTAC	5 cut(s)	103, 925, 1412, 1783, 2179
DdeI	CTNAG	9 cut(s)	95, 425, 545, 610, 809, 1088, 1365, 1394, 1540
DpnI	GATC	8 cut(s)	585, 621, 690, 987, 1431, 1868, 1942, 2114
DpnII	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
DraI	TTTAAA	1 cut(s)	1779
Eam1104I	CTCTTC	4 cut(s)	321, 774, 1979, 2208
EarI	CTCTTC	4 cut(s)	321, 774, 1979, 2208
Ecl136II	GAGCTC	1 cut(s)	331
Eco130I	CCWWGG	1 cut(s)	830
Eco24I	GRGCYC	1 cut(s)	333
Eco47I	GGWCC	3 cut(s)	202, 1494, 2197
Eco53kI	GAGCTC	1 cut(s)	331
Eco57I	CTGAAG	3 cut(s)	295, 516, 2125
Eco88I	CYCGRG	1 cut(s)	38
EcoICRI	GAGCTC	1 cut(s)	331
EcoRII	CCWGG	3 cut(s)	601, 953, 1847
EcoT14I	CCWWGG	1 cut(s)	830
EcoT38I	GRGCYC	1 cut(s)	333
ErhI	CCWWGG	1 cut(s)	830
FaeI	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1291, 1658, 2131
FalI	AAGNNNNNCTT	2 cut(s)	1374, 1406
FaqI	GGGAC	3 cut(s)	1919, 1938, 2183
FatI	CATG	9 cut(s)	57, 475, 596, 628, 963, 1017, 1287, 1654, 2127
FauNDI	CATATG	1 cut(s)	1511
FbaI	TGATCA	1 cut(s)	1866
FblI	GTMKAC	4 cut(s)	975, 1668, 1735, 1917
Fnu4HI	GCNGC	4 cut(s)	119, 1150, 1507, 2001
FokI	GGATG	8 cut(s)	422, 937, 1445, 1723, 1864, 2050, 2053, 2240
FriOI	GRGCYC	1 cut(s)	333
Fsp4HI	GCNGC	4 cut(s)	119, 1150, 1507, 2001
FspBI	CTAG	4 cut(s)	141, 642, 1569, 2108
GlaI	GCGC	2 cut(s)	1715, 2185
GluI	GCNGC	4 cut(s)	119, 1150, 1507, 2001
GsuI	CTGGAG	2 cut(s)	582, 1333
HaeIII	GGCC	3 cut(s)	72, 274, 1093
HapII	CCGG	2 cut(s)	39, 1529
HgaI	GACGC	1 cut(s)	1654
HhaI	GCGC	2 cut(s)	1716, 2186
Hin1II	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1291, 1658, 2131
Hin6I	GCGC	2 cut(s)	1714, 2184
HinP1I	GCGC	2 cut(s)	1714, 2184
HincII	GTYRAC	1 cut(s)	1736
HindII	GTYRAC	1 cut(s)	1736
HindIII	AAGCTT	1 cut(s)	860
HinfI	GANTC	5 cut(s)	442, 488, 557, 734, 770
HpaII	CCGG	2 cut(s)	39, 1529
HphI	GGTGA	3 cut(s)	313, 385, 1432
Hpy166II	GTNNAC	5 cut(s)	220, 976, 1669, 1736, 1918
Hpy188I	TCNGA	7 cut(s)	280, 314, 985, 1000, 1326, 1494, 1543
Hpy8I	GTNNAC	5 cut(s)	220, 976, 1669, 1736, 1918
Hpy99I	CGWCG	3 cut(s)	1737, 1795, 2124
HpyAV	CCTTC	7 cut(s)	7, 278, 1048, 1207, 1400, 1453, 2081
HpyCH4III	ACNGT	7 cut(s)	884, 1227, 1256, 1469, 1740, 1819, 2086
HpyF10VI	GCNNNNNNNGC	6 cut(s)	115, 160, 419, 614, 1415, 1720
HpyF3I	CTNAG	9 cut(s)	95, 425, 545, 610, 809, 1088, 1365, 1394, 1540
Hsp92II	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1291, 1658, 2131
HspAI	GCGC	2 cut(s)	1714, 2184
Ksp22I	TGATCA	1 cut(s)	1866
Kzo9I	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
LguI	GCTCTTC	3 cut(s)	321, 774, 1979
LmnI	GCTCC	2 cut(s)	805, 2133
Lsp1109I	GCAGC	4 cut(s)	130, 1136, 1493, 2012
LweI	GCATC	7 cut(s)	400, 457, 959, 1446, 1566, 1701, 2028
MaeI	CTAG	4 cut(s)	141, 642, 1569, 2108
MaeIII	GTNAC	8 cut(s)	130, 301, 1006, 1083, 1373, 2086, 2123, 2213
MalI	GATC	8 cut(s)	585, 621, 690, 987, 1431, 1868, 1942, 2114
MbiI	CCGCTC	1 cut(s)	818
MboI	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
MfeI	CAATTG	1 cut(s)	1155
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	6 cut(s)	39, 333, 1223, 1519, 1662, 2160
MlyI	GAGTC	1 cut(s)	764
MmeI	TCCRAC	1 cut(s)	2031
MroXI	GAANNNNTTC	1 cut(s)	17
MseI	TTAA	5 cut(s)	432, 720, 765, 1181, 1778
MslI	CAYNNNNRTG	3 cut(s)	453, 480, 672
MspA1I	CMGCKG	1 cut(s)	1506
MspI	CCGG	2 cut(s)	39, 1529
MspR9I	CCNGG	6 cut(s)	39, 40, 603, 955, 1529, 1849
MunI	CAATTG	1 cut(s)	1155
Mva1269I	GAATGC	1 cut(s)	1728
MvaI	CCWGG	3 cut(s)	603, 955, 1849
MvnI	CGCG	2 cut(s)	2184, 2186
MwoI	GCNNNNNNNGC	6 cut(s)	115, 160, 419, 614, 1415, 1720
NciI	CCSGG	3 cut(s)	39, 40, 1529
NdeI	CATATG	1 cut(s)	1511
NdeII	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
NlaIII	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1291, 1658, 2131
NlaIV	GGNNCC	4 cut(s)	36, 241, 607, 2199
NmuCI	GTSAC	3 cut(s)	130, 301, 2123
NspI	RCATGY	3 cut(s)	632, 967, 2131
PciI	ACATGT	1 cut(s)	2127
PciSI	GCTCTTC	3 cut(s)	321, 774, 1979
PctI	GAATGC	1 cut(s)	1728
PdmI	GAANNNNTTC	1 cut(s)	17
PfeI	GAWTC	4 cut(s)	442, 488, 557, 734
PflMI	CCANNNNNTGG	1 cut(s)	602
PfoI	TCCNGGA	1 cut(s)	1847
PkrI	GCNGC	4 cut(s)	120, 1151, 1508, 2002
PleI	GAGTC	1 cut(s)	764
PpsI	GAGTC	1 cut(s)	764
PscI	ACATGT	1 cut(s)	2127
PshBI	ATTAAT	1 cut(s)	720
PsiI	TTATAA	2 cut(s)	66, 255
Psp124BI	GAGCTC	1 cut(s)	333
Psp6I	CCWGG	3 cut(s)	601, 953, 1847
PspGI	CCWGG	3 cut(s)	601, 953, 1847
PspN4I	GGNNCC	4 cut(s)	36, 241, 607, 2199
PspPI	GGNCC	3 cut(s)	202, 1494, 2197
PsrI	GAACNNNNNNTAC	4 cut(s)	917, 949, 2171, 2203
PstI	CTGCAG	1 cut(s)	1725
PstNI	CAGNNNCTG	1 cut(s)	617
PsuI	RGATCY	1 cut(s)	688
RsaI	GTAC	5 cut(s)	104, 926, 1413, 1784, 2180
RsaNI	GTAC	5 cut(s)	103, 925, 1412, 1783, 2179
RseI	CAYNNNNRTG	3 cut(s)	453, 480, 672
SacI	GAGCTC	1 cut(s)	333
SalI	GTCGAC	1 cut(s)	1734
SapI	GCTCTTC	3 cut(s)	321, 774, 1979
SaqAI	TTAA	5 cut(s)	432, 720, 765, 1181, 1778
SatI	GCNGC	4 cut(s)	119, 1150, 1507, 2001
Sau3AI	GATC	8 cut(s)	583, 619, 688, 985, 1429, 1866, 1940, 2112
Sau96I	GGNCC	3 cut(s)	202, 1494, 2197
ScaI	AGTACT	2 cut(s)	1413, 1784
SchI	GAGTC	1 cut(s)	764
ScrFI	CCNGG	6 cut(s)	39, 40, 603, 955, 1529, 1849
SduI	GDGCHC	6 cut(s)	39, 333, 1223, 1519, 1662, 2160
SfaNI	GCATC	7 cut(s)	400, 457, 959, 1446, 1566, 1701, 2028
SfcI	CTRYAG	3 cut(s)	679, 880, 1721
SinI	GGWCC	3 cut(s)	202, 1494, 2197
SmaI	CCCGGG	1 cut(s)	40
SmiMI	CAYNNNNRTG	3 cut(s)	453, 480, 672
SmlI	CTYRAG	5 cut(s)	74, 268, 460, 704, 1585
SmoI	CTYRAG	5 cut(s)	74, 268, 460, 704, 1585
SsiI	CCGC	5 cut(s)	161, 446, 818, 1504, 2182
SspI	AATATT	1 cut(s)	1631
SspMI	CTAG	4 cut(s)	141, 642, 1569, 2108
SstI	GAGCTC	1 cut(s)	333
StyD4I	CCNGG	6 cut(s)	37, 38, 601, 953, 1527, 1847
StyI	CCWWGG	1 cut(s)	830
TaaI	ACNGT	7 cut(s)	884, 1227, 1256, 1469, 1740, 1819, 2086
TaqI	TCGA	4 cut(s)	198, 1195, 1735, 1790
TaqII	GACCGA	1 cut(s)	2185
TatI	WGTACW	3 cut(s)	102, 1411, 1782
TfiI	GAWTC	4 cut(s)	442, 488, 557, 734
Tru1I	TTAA	5 cut(s)	432, 720, 765, 1181, 1778
Tru9I	TTAA	5 cut(s)	432, 720, 765, 1181, 1778
TscAI	CASTG	3 cut(s)	429, 1405, 1730
TseFI	GTSAC	3 cut(s)	130, 301, 2123
TseI	GCWGC	4 cut(s)	118, 1149, 1506, 2000
Tsp45I	GTSAC	3 cut(s)	130, 301, 2123
TspDTI	ATGAA	9 cut(s)	17, 452, 905, 932, 1030, 1094, 1907, 2063, 2244
TspGWI	ACGGA	1 cut(s)	186
TspMI	CCCGGG	1 cut(s)	38
TspRI	CASTG	3 cut(s)	429, 1405, 1730
Van91I	CCANNNNNTGG	1 cut(s)	602
VpaK11BI	GGWCC	3 cut(s)	202, 1494, 2197
VspI	ATTAAT	1 cut(s)	720
XapI	RAATTY	6 cut(s)	699, 848, 994, 1048, 1952, 2054
XbaI	TCTAGA	2 cut(s)	140, 641
XceI	RCATGY	3 cut(s)	632, 967, 2131
XmaI	CCCGGG	1 cut(s)	38
XmiI	GTMKAC	4 cut(s)	975, 1668, 1735, 1917
XmnI	GAANNNNTTC	1 cut(s)	17
XspI	CTAG	4 cut(s)	141, 642, 1569, 2108
ZrmI	AGTACT	2 cut(s)	1413, 1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.