Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00508

Orthogroup ID

OG0005261

Physical Location & Seq

Genomic Coordinates Forward (+)

19410 .. 24428

Gene Structure 5019 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G011620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGAAGTTTGGGAAGGAGTTCAAGAAACAAATGGTGCCCGAGTGGTCAGAAGCCTACATGGATTATAATGGCCTCAAGAGGATATTGCGAGAGCTAAGAGAGTACAAGCAAAGTAAGCAGCACCCTGCTGACCAAGTAAGAGATGTGAACACATTGCGTGGAGGTGGTTCCAAGCAGTTTTATAAGACCAAGTTCTTGAGGACGTCAGAGGAAGGAGGAGAAATTGAGGTGTCATTCTTCAGAAAACTTGACGAAGAGCTCAACAAGGTCAATACATTTTACAAGGAAAAATTGGAGGAGGTGAAGCAGGAAGCAAGTCAGTTGAATAAACAAATGGACGCTTTGGTTGCACTGAGGATTAAGATGAAGATTCCGCATCAAGATGGCTCAAGTTCAGGGATCGAGGCCCCCCCCCCCCTCCCCTCAGTTGCTGATCCACCACATGCTAACATTTCTAGAAGTGATAGCAGAGAGGTGTTGCATACCTATGACTATAGACAAGATCCTCTGGAAATTCTTGAGGGTGTGAGAATTAATAATACACTTGAATCTTCAATATCAACCATCAATGGTGTTTTTAAGGACTCAAAAGAAGAGCAGTTGAGCTTTGATAAAGAGGAGCTGAGGAGAGCGGAAGAACGACCAAGGGTGGCATTTATTGAATTTTACCATAAGCTTCAACTTCTAAAGCACTACAGTTTTATGAACCACTCTGCATTTTCCAAGATTATGAAGAAGTACGAAAAGTTCTCATCAAGGAGAGCATACAGGTCATACATGCAAATAGTAGACAACTCTGATCTTGGAAATTCTGATGAGGTTACTAACCTCATGGAGAGGGTGGAGGCTACCTTCATCAAGAATTTTTCACACTCAAATCGTAGAAAAGGTATGAATAAGTTACTGAGGCCAAAAGCAAAACGAGAGAAGCACAAAGTATCGTTTTTATCGGGTTTCTTTTCTGGCTGCTCAATTGCTCTACTGGTTGCTATTGTATTAAGAATACAAGCTAGAAAAATAATGAATAAGAAGGAGGGCACACAGTATATGGAAAACATTTTCCCACTTTACAGTTTATTTGGATACATTGTCCTACATTTGCTCATGTATGCTGGCAATATATACTTCTGGAGGCGTTATCGGATAAACTATCCATTTATATTTGGTTTCGAGAAAGGAACTGAGTTGAGTTACCGAGAAGTTTTCCTTCTCAGCAGTCAGCACTGGTCTAGCTTGCAGTACTTGCATTGGGCGTTGATCCTTGTCGTCACCTTCTGCCCTTTCGACATCCTATACCGTTCAAGTCGTTTCTTCTTCACTCGGACCTTATTCCTCTGCATATGCGCCCCTCTTTACCCGGAGACATTCTCAGACTTTTTCTTGGCAGACCAGCTTACTAGCCAGATGCAAGCCTTGAGGAGTTTTGTGTTATACATCTGCTACTACAGTTTGGGAGAATATTCAAGGAGGCAAAGCAAGTGCCATGAGCACGGCGTCTACAATACTTTGTATATTGTTATTGCTGTCATACCATTTTGGATGCGCTTCCTGCAGTGCATTCGCCGACTGTGTGAAGAAAAGGATTTGAAGCACTTGTGCAATGGTTTAAAGTACTTTTTGACGATTGTTGCAGTTATCGTAAGAACTGTTTATGATTCTGCTGTTGCAACAATGATGAATACATATTGGGACATTGACAGGGGACTTCTACAAAAGCGATCAAAGAAATTTTTTTTGAGAGATAGACTTCAAGTTTCACAGAAGAGCGTGTATTTTGCAGCTATGTTGGTGTTGGAATTTAGATTGCCATCCCTTCATAAAATGACAGTGACAACCATCTATGCCTGCCTAGAGATCATTCGTCGTGACATGTGGAGCTTCTTCAGGTATTATTTTCCTCTCATCGACATATCTAATTACCGTGAGTTCAAGTCGGTCCCTCTTCCTTTCAGTTACAATGACGAGGATGATGACAAGGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0012505 GO:0016020 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

661

Amino Acids

78.39

Weight (kDa)

9.26

Isoelectric Point (pI)

55.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 45	1.3e-13	SPX domain
SPX	PF03105	38 - 261	1.3e-40	SPX domain
EXS	PF03124	353 - 629	1.6e-54	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69480 AT1G69480
fragaria_vesca	FvH4_4g30940 FvH4_4g30940 FvH4_4g30940
malus_domestica	MD00G1081200.v1.1 MD00G1081400.v1.1
prunus_persica	Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1
pyrus_communis	pycom13g06130
rosa_chinensis	RchiOBHm_Chr4g0439241 RchiOBHm_Chr4g0439281
rosa_laevigata	RLG00000006285
rosa_multiflora	Rmu_sc0006598.1_g000011 Rmu_ssc0000171.1_g000023 Rmu_ssc0000171.1_g000024
rosa_roxburghii	Rroxscaffold_5G00380240
rosa_rugosa	Rorug04G0317200
rosa_samantha	Rh4AG367800 Rh4AG367900 Rh4BG379700 Rh4CG394000 Rh4DG374200
rosa_wichuraiana	Rw0G005610 Rw0G011620 Rw5G028560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	66, 183
AatII	GACGTC	1 cut(s)	206
AccB1I	GGYRCC	1 cut(s)	34
AccBSI	CCGCTC	1 cut(s)	632
AccI	GTMKAC	2 cut(s)	789, 1497
AciI	CCGC	2 cut(s)	374, 632
AclWI	GGATC	4 cut(s)	407, 428, 497, 1252
AcsI	RAATTY	6 cut(s)	513, 662, 808, 862, 1727, 1796
AcuI	CTGAAG	2 cut(s)	223, 1867
AcyI	GRCGYC	2 cut(s)	203, 1494
AfaI	GTAC	4 cut(s)	104, 740, 1241, 1613
AflIII	ACRYGT	1 cut(s)	1869
Alw21I	GWGCWC	2 cut(s)	261, 1491
Alw26I	GTCTC	1 cut(s)	1355
AlwI	GGATC	4 cut(s)	407, 428, 497, 1252
AlwNI	CAGNNNCTG	1 cut(s)	431
Ama87I	CYCGRG	1 cut(s)	38
AoxI	GGCC	3 cut(s)	70, 405, 908
ApeKI	GCWGC	3 cut(s)	118, 966, 1778
ApoI	RAATTY	6 cut(s)	513, 662, 808, 862, 1727, 1796
AseI	ATTAAT	1 cut(s)	534
Asp700I	GAANNNNTTC	1 cut(s)	17
AspLEI	GCGC	2 cut(s)	1346, 1545
AspS9I	GGNCC	3 cut(s)	406, 1323, 1936
AsuC2I	CCSGG	1 cut(s)	1358
AsuHPI	GGTGA	2 cut(s)	313, 1261
AvaI	CYCGRG	1 cut(s)	38
AvaII	GGWCC	2 cut(s)	1323, 1936
BaeGI	GKGCMC	2 cut(s)	39, 1040
BanI	GGYRCC	1 cut(s)	34
BanII	GRGCYC	1 cut(s)	261
Bbv12I	GWGCWC	2 cut(s)	261, 1491
BbvCI	CCTCAGC	1 cut(s)	623
BbvI	GCAGC	3 cut(s)	130, 953, 1790
BccI	CCATC	4 cut(s)	377, 572, 1816, 1844
BceAI	ACGGC	1 cut(s)	1507
BcgI	CGANNNNNNTGC	2 cut(s)	1541, 1575
BciVI	GTATCC	1 cut(s)	1076
BcnI	CCSGG	1 cut(s)	1358
BcoDI	GTCTC	1 cut(s)	1355
BfaI	CTAG	5 cut(s)	456, 1011, 1230, 1398, 1850
BfmI	CTRYAG	4 cut(s)	493, 694, 1444, 1550
BfuI	GTATCC	1 cut(s)	1076
BisI	GCNGC	3 cut(s)	119, 967, 1779
BlsI	GCNGC	3 cut(s)	120, 968, 1780
BmcAI	AGTACT	2 cut(s)	1241, 1613
Bme1390I	CCNGG	1 cut(s)	1358
Bme18I	GGWCC	2 cut(s)	1323, 1936
BmeT110I	CYCGRG	1 cut(s)	38
BmgT120I	GGNCC	3 cut(s)	406, 1323, 1936
BmiI	GGNNCC	4 cut(s)	36, 169, 408, 1938
BmrFI	CCNGG	1 cut(s)	1358
BmsI	GCATC	3 cut(s)	385, 1395, 1530
BplI	GAGNNNNNCTC	2 cut(s)	1352, 1384
BpmI	CTGGAG	1 cut(s)	1150
Bpu10I	CCTNAGC	1 cut(s)	623
BpuEI	CTTGAG	5 cut(s)	59, 217, 373, 539, 1435
BpuMI	CCSGG	1 cut(s)	1358
BsaBI	GATNNNNATC	1 cut(s)	1807
BsaHI	GRCGYC	2 cut(s)	203, 1494
BsaJI	CCNNGG	1 cut(s)	644
Bse1I	ACTGG	2 cut(s)	987, 1229
Bse3DI	GCAATG	2 cut(s)	152, 1606
Bse8I	GATNNNNATC	1 cut(s)	1807
BseDI	CCNNGG	1 cut(s)	644
BseGI	GGATG	5 cut(s)	1287, 1545, 1808, 1972, 1984
BseJI	GATNNNNATC	1 cut(s)	1807
BseMI	GCAATG	2 cut(s)	152, 1606
BseMII	CTCAG	7 cut(s)	344, 438, 614, 896, 1173, 1225, 1383
BseNI	ACTGG	2 cut(s)	987, 1229
BseRI	GAGGAG	5 cut(s)	231, 311, 632, 640, 1432
BseSI	GKGCMC	2 cut(s)	39, 1040
BseXI	GCAGC	3 cut(s)	130, 953, 1790
BshFI	GGCC	3 cut(s)	72, 407, 910
BshNI	GGYRCC	1 cut(s)	34
BsiHKAI	GWGCWC	2 cut(s)	261, 1491
BsiHKCI	CYCGRG	1 cut(s)	38
BsiSI	CCGG	1 cut(s)	1358
BslFI	GGGAC	3 cut(s)	1703, 1716, 1922
BsmAI	GTCTC	1 cut(s)	1355
BsmFI	GGGAC	3 cut(s)	1703, 1716, 1922
BsmI	GAATGC	1 cut(s)	1557
BsnI	GGCC	3 cut(s)	72, 407, 910
BsoBI	CYCGRG	1 cut(s)	38
Bsp1286I	GDGCHC	4 cut(s)	39, 261, 1040, 1491
Bsp143I	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
BspACI	CCGC	2 cut(s)	374, 632
BspANI	GGCC	3 cut(s)	72, 407, 910
BspCNI	CTCAG	7 cut(s)	345, 437, 615, 897, 1174, 1224, 1382
BspLI	GGNNCC	4 cut(s)	36, 169, 408, 1938
BspMAI	CTGCAG	1 cut(s)	1554
BspPI	GGATC	4 cut(s)	407, 428, 497, 1252
BspQI	GCTCTTC	3 cut(s)	249, 588, 1757
BspT107I	GGYRCC	1 cut(s)	34
BsrBI	CCGCTC	1 cut(s)	632
BsrDI	GCAATG	2 cut(s)	152, 1606
BsrI	ACTGG	2 cut(s)	987, 1229
BssECI	CCNNGG	1 cut(s)	644
BssMI	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
BssNI	GRCGYC	2 cut(s)	203, 1494
BssT1I	CCWWGG	1 cut(s)	644
Bst4CI	ACNGT	9 cut(s)	698, 1044, 1073, 1298, 1448, 1569, 1648, 1828, 1922
Bst6I	CTCTTC	4 cut(s)	249, 588, 1757, 1947
BstACI	GRCGYC	2 cut(s)	203, 1494
BstAPI	GCANNNNNTGC	1 cut(s)	1243
BstC8I	GCNNGC	4 cut(s)	1114, 1235, 1410, 1846
BstDEI	CTNAG	8 cut(s)	95, 353, 424, 623, 905, 1182, 1211, 1369
BstF5I	GGATG	5 cut(s)	1287, 1545, 1808, 1972, 1984
BstHHI	GCGC	2 cut(s)	1346, 1545
BstKTI	GATC	7 cut(s)	402, 436, 505, 802, 1260, 1721, 1857
BstMAI	GTCTC	1 cut(s)	1355
BstMBI	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
BstMWI	GCNNNNNNNGC	4 cut(s)	115, 347, 1243, 1549
BstNSI	RCATGY	3 cut(s)	446, 781, 1873
BstSCI	CCNGG	1 cut(s)	1356
BstSFI	CTRYAG	4 cut(s)	493, 694, 1444, 1550
BstSLI	GKGCMC	2 cut(s)	39, 1040
BstV1I	GCAGC	3 cut(s)	130, 953, 1790
BstX2I	RGATCY	1 cut(s)	502
BstYI	RGATCY	1 cut(s)	502
BsuI	GTATCC	1 cut(s)	1076
BsuRI	GGCC	3 cut(s)	72, 407, 910
BtsCI	GGATG	5 cut(s)	1287, 1545, 1808, 1972, 1984
BtsI	GCAGTG	1 cut(s)	1559
BtsIMutI	CAGTG	4 cut(s)	350, 1222, 1559, 1833
Cac8I	GCNNGC	4 cut(s)	1114, 1235, 1410, 1846
CaiI	CAGNNNCTG	1 cut(s)	431
CfoI	GCGC	2 cut(s)	1346, 1545
Cfr13I	GGNCC	3 cut(s)	406, 1323, 1936
CseI	GACGC	2 cut(s)	347, 1483
Csp6I	GTAC	4 cut(s)	103, 739, 1240, 1612
CviAII	CATG	7 cut(s)	58, 443, 778, 832, 1105, 1484, 1870
CviQI	GTAC	4 cut(s)	103, 739, 1240, 1612
DdeI	CTNAG	8 cut(s)	95, 353, 424, 623, 905, 1182, 1211, 1369
DpnI	GATC	7 cut(s)	401, 435, 504, 801, 1259, 1720, 1856
DpnII	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
DraI	TTTAAA	1 cut(s)	1608
Eam1104I	CTCTTC	4 cut(s)	249, 588, 1757, 1947
EarI	CTCTTC	4 cut(s)	249, 588, 1757, 1947
Ecl136II	GAGCTC	1 cut(s)	259
Eco130I	CCWWGG	1 cut(s)	644
Eco24I	GRGCYC	1 cut(s)	261
Eco47I	GGWCC	2 cut(s)	1323, 1936
Eco53kI	GAGCTC	1 cut(s)	259
Eco57I	CTGAAG	2 cut(s)	223, 1867
Eco88I	CYCGRG	1 cut(s)	38
EcoICRI	GAGCTC	1 cut(s)	259
EcoO109I	RGGNCCY	1 cut(s)	406
EcoT14I	CCWWGG	1 cut(s)	644
EcoT38I	GRGCYC	1 cut(s)	261
ErhI	CCWWGG	1 cut(s)	644
FaeI	CATG	7 cut(s)	61, 446, 781, 835, 1108, 1487, 1873
FalI	AAGNNNNNCTT	2 cut(s)	1191, 1223
FaqI	GGGAC	3 cut(s)	1703, 1716, 1922
FatI	CATG	7 cut(s)	57, 442, 777, 831, 1104, 1483, 1869
FauNDI	CATATG	1 cut(s)	1340
FblI	GTMKAC	2 cut(s)	789, 1497
Fnu4HI	GCNGC	3 cut(s)	119, 967, 1779
FokI	GGATG	4 cut(s)	1274, 1552, 1795, 1979
FriOI	GRGCYC	1 cut(s)	261
Fsp4HI	GCNGC	3 cut(s)	119, 967, 1779
FspBI	CTAG	5 cut(s)	456, 1011, 1230, 1398, 1850
GlaI	GCGC	2 cut(s)	1345, 1544
GluI	GCNGC	3 cut(s)	119, 967, 1779
GsuI	CTGGAG	1 cut(s)	1150
HaeIII	GGCC	3 cut(s)	72, 407, 910
HapII	CCGG	1 cut(s)	1358
HgaI	GACGC	2 cut(s)	347, 1483
HhaI	GCGC	2 cut(s)	1346, 1545
Hin1I	GRCGYC	2 cut(s)	203, 1494
Hin1II	CATG	7 cut(s)	61, 446, 781, 835, 1108, 1487, 1873
Hin6I	GCGC	2 cut(s)	1344, 1543
HinP1I	GCGC	2 cut(s)	1344, 1543
HindIII	AAGCTT	1 cut(s)	674
HinfI	GANTC	4 cut(s)	370, 548, 584, 1655
HpaII	CCGG	1 cut(s)	1358
HphI	GGTGA	2 cut(s)	313, 1261
Hpy166II	GTNNAC	3 cut(s)	148, 790, 1498
Hpy188I	TCNGA	8 cut(s)	49, 208, 242, 799, 814, 1143, 1323, 1372
Hpy8I	GTNNAC	3 cut(s)	148, 790, 1498
Hpy99I	CGWCG	1 cut(s)	1866
HpyAV	CCTTC	7 cut(s)	7, 206, 862, 1024, 1217, 1282, 1823
HpyCH4III	ACNGT	9 cut(s)	698, 1044, 1073, 1298, 1448, 1569, 1648, 1828, 1922
HpyCH4IV	ACGT	1 cut(s)	203
HpyF10VI	GCNNNNNNNGC	4 cut(s)	115, 347, 1243, 1549
HpyF3I	CTNAG	8 cut(s)	95, 353, 424, 623, 905, 1182, 1211, 1369
HpySE526I	ACGT	1 cut(s)	203
Hsp92I	GRCGYC	2 cut(s)	203, 1494
Hsp92II	CATG	7 cut(s)	61, 446, 781, 835, 1108, 1487, 1873
HspAI	GCGC	2 cut(s)	1344, 1543
Kzo9I	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
LguI	GCTCTTC	3 cut(s)	249, 588, 1757
LmnI	GCTCC	2 cut(s)	619, 1875
Lsp1109I	GCAGC	3 cut(s)	130, 953, 1790
LweI	GCATC	3 cut(s)	385, 1395, 1530
MaeI	CTAG	5 cut(s)	456, 1011, 1230, 1398, 1850
MaeII	ACGT	1 cut(s)	203
MaeIII	GTNAC	7 cut(s)	820, 900, 1190, 1267, 1828, 1865, 1952
MalI	GATC	7 cut(s)	401, 435, 504, 801, 1259, 1720, 1856
MbiI	CCGCTC	1 cut(s)	632
MboI	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	1 cut(s)	502
MhlI	GDGCHC	4 cut(s)	39, 261, 1040, 1491
MlyI	GAGTC	1 cut(s)	578
MmeI	TCCRAC	1 cut(s)	1773
MroXI	GAANNNNTTC	1 cut(s)	17
MseI	TTAA	5 cut(s)	360, 534, 579, 998, 1607
MslI	CAYNNNNRTG	2 cut(s)	381, 486
MspI	CCGG	1 cut(s)	1358
MspR9I	CCNGG	1 cut(s)	1358
MunI	CAATTG	1 cut(s)	972
Mva1269I	GAATGC	1 cut(s)	1557
MwoI	GCNNNNNNNGC	4 cut(s)	115, 347, 1243, 1549
NciI	CCSGG	1 cut(s)	1358
NdeI	CATATG	1 cut(s)	1340
NdeII	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
NlaIII	CATG	7 cut(s)	61, 446, 781, 835, 1108, 1487, 1873
NlaIV	GGNNCC	4 cut(s)	36, 169, 408, 1938
NmuCI	GTSAC	3 cut(s)	1267, 1828, 1865
NspI	RCATGY	3 cut(s)	446, 781, 1873
PciI	ACATGT	1 cut(s)	1869
PciSI	GCTCTTC	3 cut(s)	249, 588, 1757
PctI	GAATGC	1 cut(s)	1557
PdmI	GAANNNNTTC	1 cut(s)	17
PfeI	GAWTC	3 cut(s)	370, 548, 1655
PkrI	GCNGC	3 cut(s)	120, 968, 1780
PleI	GAGTC	1 cut(s)	578
PpsI	GAGTC	1 cut(s)	578
PscI	ACATGT	1 cut(s)	1869
PshBI	ATTAAT	1 cut(s)	534
PsiI	TTATAA	2 cut(s)	66, 183
Psp124BI	GAGCTC	1 cut(s)	261
PspN4I	GGNNCC	4 cut(s)	36, 169, 408, 1938
PspPI	GGNCC	3 cut(s)	406, 1323, 1936
PsrI	GAACNNNNNNTAC	2 cut(s)	731, 763
PstI	CTGCAG	1 cut(s)	1554
PstNI	CAGNNNCTG	1 cut(s)	431
PsuI	RGATCY	1 cut(s)	502
RsaI	GTAC	4 cut(s)	104, 740, 1241, 1613
RsaNI	GTAC	4 cut(s)	103, 739, 1240, 1612
RseI	CAYNNNNRTG	2 cut(s)	381, 486
SacI	GAGCTC	1 cut(s)	261
SapI	GCTCTTC	3 cut(s)	249, 588, 1757
SaqAI	TTAA	5 cut(s)	360, 534, 579, 998, 1607
SatI	GCNGC	3 cut(s)	119, 967, 1779
Sau3AI	GATC	7 cut(s)	399, 433, 502, 799, 1257, 1718, 1854
Sau96I	GGNCC	3 cut(s)	406, 1323, 1936
ScaI	AGTACT	2 cut(s)	1241, 1613
SchI	GAGTC	1 cut(s)	578
ScrFI	CCNGG	1 cut(s)	1358
SduI	GDGCHC	4 cut(s)	39, 261, 1040, 1491
SfaNI	GCATC	3 cut(s)	385, 1395, 1530
SfcI	CTRYAG	4 cut(s)	493, 694, 1444, 1550
SinI	GGWCC	2 cut(s)	1323, 1936
SmiMI	CAYNNNNRTG	2 cut(s)	381, 486
SmlI	CTYRAG	5 cut(s)	74, 196, 388, 518, 1414
SmoI	CTYRAG	5 cut(s)	74, 196, 388, 518, 1414
SsiI	CCGC	2 cut(s)	374, 632
SspI	AATATT	1 cut(s)	1460
SspMI	CTAG	5 cut(s)	456, 1011, 1230, 1398, 1850
SstI	GAGCTC	1 cut(s)	261
StyD4I	CCNGG	1 cut(s)	1356
StyI	CCWWGG	1 cut(s)	644
TaaI	ACNGT	9 cut(s)	698, 1044, 1073, 1298, 1448, 1569, 1648, 1828, 1922
TaiI	ACGT	1 cut(s)	206
TaqI	TCGA	4 cut(s)	402, 1170, 1284, 1905
TaqII	GACCGA	1 cut(s)	1924
TatI	WGTACW	3 cut(s)	102, 1239, 1611
TfiI	GAWTC	3 cut(s)	370, 548, 1655
Tru1I	TTAA	5 cut(s)	360, 534, 579, 998, 1607
Tru9I	TTAA	5 cut(s)	360, 534, 579, 998, 1607
TscAI	CASTG	4 cut(s)	357, 1229, 1559, 1833
TseFI	GTSAC	3 cut(s)	1267, 1828, 1865
TseI	GCWGC	3 cut(s)	118, 966, 1778
Tsp45I	GTSAC	3 cut(s)	1267, 1828, 1865
TspDTI	ATGAA	9 cut(s)	17, 380, 719, 746, 844, 908, 1037, 1691, 1805
TspRI	CASTG	4 cut(s)	357, 1229, 1559, 1833
VpaK11BI	GGWCC	2 cut(s)	1323, 1936
VspI	ATTAAT	1 cut(s)	534
XapI	RAATTY	6 cut(s)	513, 662, 808, 862, 1727, 1796
XbaI	TCTAGA	1 cut(s)	455
XceI	RCATGY	3 cut(s)	446, 781, 1873
XmiI	GTMKAC	2 cut(s)	789, 1497
XmnI	GAANNNNTTC	1 cut(s)	17
XspI	CTAG	5 cut(s)	456, 1011, 1230, 1398, 1850
ZraI	GACGTC	1 cut(s)	204
ZrmI	AGTACT	2 cut(s)	1241, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.