Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00223

Orthogroup ID

OG0005261

Physical Location & Seq

Genomic Coordinates Forward (+)

29777 .. 33724

Gene Structure 3948 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G005610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGAAGTTTGGGAAGGAGTTCAAGAAACAAATGGTGCCCGAGTGGTCAGAAGCCTACATGGATTATAATGGCCTCAAGAGGATATTGCGAGAGCTAAGAGAGTACAAGCAAAGTAAGCAGCACCCTGCTGACCAAGTAAGAGATGTGAACACATTGCGTGGAGGTGGTTCCAAGCAGTTTTATAAGACCAAGTTCTTGAGGCCGTCAGAGGAAGGAGGAGAAATTGAGGTGTCATTCTTCAGAAAACTTGACGAAGAGCTCAACAAGGTCAATACATTTTACAAGGAAAAATTGGAGGAGGTGAAGCAGGAAGCAAGAGTTGAGCTTAGGGCATTGGAATCTGAAGTAAAAGCAAATGATCAGGATCAGCAAGAACCATGCCCCCCCTCAGTTGCTGATCCACCACATGCTAACATTTCTAGAAGTGATAGCAGAGAGGTGTTGCATACCTATGACTATAGACAAGATCCTCTGGAAATTCTTGAGGGTGTGAGAATTAATAATACACTTGAATCTTCAATATCAACCATCAATGGTGTTTTTAAGGACTCAAAAGATCGAGAGCAGTTGAGCTTTGATAAAGAGGAGCTGAGGAGAGCGGAAGAACGACCAAGGGTGGCATTTATTGAATTTTACCATAAGCTTCAACTTCTAAAGCACTACAGTTTTATGAACCTCTCTGCATTTTCCAAGATTATGAAGAAGTACGAAAAGTTCTCATCAAGGAGAGCATACAGGTCATACATGCAAATAATAGACAACTCTGATCTTGGAAATTCTGATGAGGTTACTAACCTCATGGAGAGGGTGGAGGCTACCTTCATCAAGAATTTTTCACACTCAAATCGTAGAAAAGGTATGAAGTTACTGAGGCCAAAAGCAAAACGAGAGAAGCACAAAGTATCGTTTTTATCGGGTTTCTTTTCTGGCTGCTCAATTGCTCTACTGGTTGCTATTGTATTAAGAATACAAGCTAGAAAAATAATGAATAAGAAGGAGGGCACACAGTATATGGAAAACATTTTCCCACTTTACAGTTTATTTGGATACATTGTCCTACATTTGCTCATGTATGCTGGCGATATATACTTCTGGAGGCGTTATCGGATAAACTATCCATTTATATTTGGTTTCGAGAAAGGAACTGAGTTGAGTTACCGAGAAGTTTTCCTTCTCAGCACTGGTTTAGCTTGCAGTACTTGCATTGGGCGGTTTCCTAGCAAACTTACACTTGGAAATGGACTCGATCGATTGATCCTTGTCGTCACCTTCTGCCCTTTCGACATCCTATACCGTTCAAGTCGTTTCTTCTTCACTCGGACCTTATTCCGCTGCATATGCGCCCCTCTTTACCCGGAGACATTCTCAGACTTTTTCTTGGAAGACCAGCTTACTAGCCAGATGCAAGCCTTGAGGAGTTTTGTGTTATACATCTGCTACTATGGTTTGGGAGAATATTCAAGGAGGCAAAGCAAGTGCCATGAGCACGGCGTCTACAATACTTTGTATATTGTTATTGCTGTCATACCATTTTGGATGCGCTTCCTGCAGTGCATTCGTCGACTGTGTGAAGAAAAGGATTTGAAGCACTTGTGCAATGGTTTAAAGTACTTTTCGACGATTGTTGCAGTTATCGTAAGAACTGTTTATGAGCTGAAAAAAGGAAAGACATCCTGGATGGTGTTAACTTTGATCAGTTCTGCTGTTGCAACAATGATGAATACATATTGGGACATTGACTGGGGACTTCTACAAAAGCGATCAAAGAACAAATTTTTGAGAGATAGACTTCAAGTCTTGAATGTAATACTCAGACTTACTTGGATGCAGTTGGTGTTGGAATTTAGATTGCCATCCCTTCATAAAATGACAAATGAGCACCTAAACAATGTAGGTCAGTACCGTGAGCTCAAGTCGGTCCCTCTTCCTTTCAGTTACAATGACGAGGATGATGACAAGGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0012505 GO:0016020 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

655

Amino Acids

77.37

Weight (kDa)

9.21

Isoelectric Point (pI)

50.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 45	1.2e-13	SPX domain
SPX	PF03105	38 - 250	5.1e-30	SPX domain
EXS	PF03124	341 - 615	3.9e-66	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69480 AT1G69480
fragaria_vesca	FvH4_4g30940 FvH4_4g30940 FvH4_4g30940
malus_domestica	MD00G1081200.v1.1 MD00G1081400.v1.1
prunus_persica	Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1 Prupe.1G278600_v2.0.a1
pyrus_communis	pycom13g06130
rosa_chinensis	RchiOBHm_Chr4g0439241 RchiOBHm_Chr4g0439281
rosa_laevigata	RLG00000006285
rosa_multiflora	Rmu_sc0006598.1_g000011 Rmu_ssc0000171.1_g000023 Rmu_ssc0000171.1_g000024
rosa_roxburghii	Rroxscaffold_5G00380240
rosa_rugosa	Rorug04G0317200
rosa_samantha	Rh4AG367800 Rh4AG367900 Rh4BG379700 Rh4CG394000 Rh4DG374200
rosa_wichuraiana	Rw0G005610 Rw0G011620 Rw5G028560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	66, 183
AccB1I	GGYRCC	1 cut(s)	34
AccBSI	CCGCTC	1 cut(s)	599
AccI	GTMKAC	2 cut(s)	1494, 1561
AciI	CCGC	3 cut(s)	599, 1210, 1330
AclWI	GGATC	4 cut(s)	372, 392, 461, 1249
AcsI	RAATTY	6 cut(s)	477, 629, 775, 829, 1772, 1841
AcuI	CTGAAG	2 cut(s)	223, 363
AcyI	GRCGYC	1 cut(s)	1491
AfaI	GTAC	5 cut(s)	104, 707, 1198, 1610, 1901
AhdI	GACNNNNNGTC	1 cut(s)	1793
AjnI	CCWGG	1 cut(s)	1673
Alw21I	GWGCWC	4 cut(s)	261, 1488, 1881, 1911
Alw26I	GTCTC	1 cut(s)	1352
AlwI	GGATC	4 cut(s)	372, 392, 461, 1249
AlwNI	CAGNNNCTG	1 cut(s)	395
Ama87I	CYCGRG	1 cut(s)	38
AoxI	GGCC	3 cut(s)	70, 200, 872
ApeKI	GCWGC	3 cut(s)	118, 930, 1332
ApoI	RAATTY	6 cut(s)	477, 629, 775, 829, 1772, 1841
AseI	ATTAAT	1 cut(s)	498
Asp700I	GAANNNNTTC	1 cut(s)	17
AspLEI	GCGC	2 cut(s)	1343, 1542
AspS9I	GGNCC	2 cut(s)	1320, 1918
AsuC2I	CCSGG	1 cut(s)	1355
AsuHPI	GGTGA	2 cut(s)	313, 1258
AvaI	CYCGRG	1 cut(s)	38
AvaII	GGWCC	2 cut(s)	1320, 1918
BaeGI	GKGCMC	2 cut(s)	39, 1004
BanI	GGYRCC	1 cut(s)	34
BanII	GRGCYC	2 cut(s)	261, 1911
BbsI	GAAGAC	1 cut(s)	1389
Bbv12I	GWGCWC	4 cut(s)	261, 1488, 1881, 1911
BbvCI	CCTCAGC	1 cut(s)	590
BbvI	GCAGC	3 cut(s)	130, 917, 1319
BccI	CCATC	3 cut(s)	536, 1672, 1861
BceAI	ACGGC	2 cut(s)	187, 1504
BcgI	CGANNNNNNTGC	2 cut(s)	1538, 1572
BciT130I	CCWGG	1 cut(s)	1675
BciVI	GTATCC	1 cut(s)	1040
BclI	TGATCA	2 cut(s)	358, 1692
BcnI	CCSGG	1 cut(s)	1355
BcoDI	GTCTC	1 cut(s)	1352
BfaI	CTAG	4 cut(s)	420, 975, 1218, 1395
BfmI	CTRYAG	3 cut(s)	457, 661, 1547
BfuI	GTATCC	1 cut(s)	1040
BisI	GCNGC	3 cut(s)	119, 931, 1333
BlsI	GCNGC	3 cut(s)	120, 932, 1334
BmcAI	AGTACT	2 cut(s)	1198, 1610
Bme1390I	CCNGG	2 cut(s)	1355, 1675
Bme18I	GGWCC	2 cut(s)	1320, 1918
BmeRI	GACNNNNNGTC	1 cut(s)	1793
BmeT110I	CYCGRG	1 cut(s)	38
BmgT120I	GGNCC	2 cut(s)	1320, 1918
BmiI	GGNNCC	3 cut(s)	36, 169, 1920
BmrFI	CCNGG	2 cut(s)	1355, 1675
BmrI	ACTGGG	1 cut(s)	1750
BmsI	GCATC	3 cut(s)	1392, 1527, 1815
BmuI	ACTGGG	1 cut(s)	1750
BpiI	GAAGAC	1 cut(s)	1389
BplI	GAGNNNNNCTC	2 cut(s)	1349, 1381
BpmI	CTGGAG	1 cut(s)	1114
Bpu10I	CCTNAGC	2 cut(s)	326, 590
BpuEI	CTTGAG	5 cut(s)	59, 217, 503, 1432, 1895
BpuMI	CCSGG	1 cut(s)	1355
Bsa29I	ATCGAT	1 cut(s)	1249
BsaBI	GATNNNNATC	2 cut(s)	363, 1852
BsaHI	GRCGYC	1 cut(s)	1491
BsaJI	CCNNGG	1 cut(s)	611
Bse1I	ACTGG	3 cut(s)	951, 1186, 1745
Bse3DI	GCAATG	2 cut(s)	152, 1603
Bse8I	GATNNNNATC	2 cut(s)	363, 1852
BseBI	CCWGG	1 cut(s)	1675
BseCI	ATCGAT	1 cut(s)	1249
BseDI	CCNNGG	1 cut(s)	611
BseGI	GGATG	8 cut(s)	1284, 1542, 1670, 1683, 1830, 1853, 1954, 1966
BseJI	GATNNNNATC	2 cut(s)	363, 1852
BseMI	GCAATG	2 cut(s)	152, 1603
BseMII	CTCAG	7 cut(s)	402, 581, 860, 1137, 1189, 1380, 1825
BseNI	ACTGG	3 cut(s)	951, 1186, 1745
BseRI	GAGGAG	5 cut(s)	231, 311, 599, 607, 1429
BseSI	GKGCMC	2 cut(s)	39, 1004
BseXI	GCAGC	3 cut(s)	130, 917, 1319
Bsh1285I	CGRYCG	1 cut(s)	1249
BshFI	GGCC	3 cut(s)	72, 202, 874
BshNI	GGYRCC	1 cut(s)	34
BshVI	ATCGAT	1 cut(s)	1249
BsiEI	CGRYCG	1 cut(s)	1249
BsiHKAI	GWGCWC	4 cut(s)	261, 1488, 1881, 1911
BsiHKCI	CYCGRG	1 cut(s)	38
BsiSI	CCGG	1 cut(s)	1355
BslFI	GGGAC	3 cut(s)	1745, 1758, 1904
BsmAI	GTCTC	1 cut(s)	1352
BsmFI	GGGAC	3 cut(s)	1745, 1758, 1904
BsmI	GAATGC	1 cut(s)	1554
BsnI	GGCC	3 cut(s)	72, 202, 874
BsoBI	CYCGRG	1 cut(s)	38
Bsp1286I	GDGCHC	6 cut(s)	39, 261, 1004, 1488, 1881, 1911
BspACI	CCGC	3 cut(s)	599, 1210, 1330
BspANI	GGCC	3 cut(s)	72, 202, 874
BspCNI	CTCAG	7 cut(s)	401, 582, 861, 1138, 1188, 1379, 1824
BspDI	ATCGAT	1 cut(s)	1249
BspLI	GGNNCC	3 cut(s)	36, 169, 1920
BspMAI	CTGCAG	1 cut(s)	1551
BspPI	GGATC	4 cut(s)	372, 392, 461, 1249
BspQI	GCTCTTC	1 cut(s)	249
BspT107I	GGYRCC	1 cut(s)	34
BsrBI	CCGCTC	1 cut(s)	599
BsrDI	GCAATG	2 cut(s)	152, 1603
BsrI	ACTGG	3 cut(s)	951, 1186, 1745
BssECI	CCNNGG	1 cut(s)	611
BssNI	GRCGYC	1 cut(s)	1491
BssT1I	CCWWGG	1 cut(s)	611
Bst2UI	CCWGG	1 cut(s)	1675
Bst4CI	ACNGT	7 cut(s)	665, 1008, 1037, 1295, 1566, 1645, 1904
Bst6I	CTCTTC	2 cut(s)	249, 1929
BstACI	GRCGYC	1 cut(s)	1491
BstAPI	GCANNNNNTGC	1 cut(s)	1200
BstC8I	GCNNGC	3 cut(s)	1078, 1192, 1407
BstDEI	CTNAG	9 cut(s)	95, 326, 388, 590, 869, 1146, 1175, 1366, 1811
BstF5I	GGATG	8 cut(s)	1284, 1542, 1670, 1683, 1830, 1853, 1954, 1966
BstHHI	GCGC	2 cut(s)	1343, 1542
BstMAI	GTCTC	1 cut(s)	1352
BstMCI	CGRYCG	1 cut(s)	1249
BstMWI	GCNNNNNNNGC	4 cut(s)	115, 1200, 1338, 1546
BstNI	CCWGG	1 cut(s)	1675
BstNSI	RCATGY	2 cut(s)	410, 748
BstSCI	CCNGG	2 cut(s)	1353, 1673
BstSFI	CTRYAG	3 cut(s)	457, 661, 1547
BstSLI	GKGCMC	2 cut(s)	39, 1004
BstV1I	GCAGC	3 cut(s)	130, 917, 1319
BstV2I	GAAGAC	1 cut(s)	1389
BstX2I	RGATCY	1 cut(s)	466
BstYI	RGATCY	1 cut(s)	466
Bsu15I	ATCGAT	1 cut(s)	1249
BsuI	GTATCC	1 cut(s)	1040
BsuRI	GGCC	3 cut(s)	72, 202, 874
BsuTUI	ATCGAT	1 cut(s)	1249
BtsCI	GGATG	8 cut(s)	1284, 1542, 1670, 1683, 1830, 1853, 1954, 1966
BtsI	GCAGTG	1 cut(s)	1556
BtsIMutI	CAGTG	2 cut(s)	1179, 1556
Cac8I	GCNNGC	3 cut(s)	1078, 1192, 1407
CaiI	CAGNNNCTG	1 cut(s)	395
CfoI	GCGC	2 cut(s)	1343, 1542
Cfr13I	GGNCC	2 cut(s)	1320, 1918
ClaI	ATCGAT	1 cut(s)	1249
CseI	GACGC	1 cut(s)	1480
Csp6I	GTAC	5 cut(s)	103, 706, 1197, 1609, 1900
CviAII	CATG	7 cut(s)	58, 378, 407, 745, 799, 1069, 1481
CviQI	GTAC	5 cut(s)	103, 706, 1197, 1609, 1900
DdeI	CTNAG	9 cut(s)	95, 326, 388, 590, 869, 1146, 1175, 1366, 1811
DraI	TTTAAA	1 cut(s)	1605
DriI	GACNNNNNGTC	1 cut(s)	1793
Eam1104I	CTCTTC	2 cut(s)	249, 1929
Eam1105I	GACNNNNNGTC	1 cut(s)	1793
EarI	CTCTTC	2 cut(s)	249, 1929
Ecl136II	GAGCTC	2 cut(s)	259, 1909
Eco130I	CCWWGG	1 cut(s)	611
Eco24I	GRGCYC	2 cut(s)	261, 1911
Eco47I	GGWCC	2 cut(s)	1320, 1918
Eco53kI	GAGCTC	2 cut(s)	259, 1909
Eco57I	CTGAAG	2 cut(s)	223, 363
Eco88I	CYCGRG	1 cut(s)	38
EcoICRI	GAGCTC	2 cut(s)	259, 1909
EcoRII	CCWGG	1 cut(s)	1673
EcoT14I	CCWWGG	1 cut(s)	611
EcoT38I	GRGCYC	2 cut(s)	261, 1911
ErhI	CCWWGG	1 cut(s)	611
FaeI	CATG	7 cut(s)	61, 381, 410, 748, 802, 1072, 1484
FalI	AAGNNNNNCTT	4 cut(s)	1155, 1187, 1374, 1406
FaqI	GGGAC	3 cut(s)	1745, 1758, 1904
FatI	CATG	7 cut(s)	57, 377, 406, 744, 798, 1068, 1480
FauNDI	CATATG	1 cut(s)	1337
FbaI	TGATCA	2 cut(s)	358, 1692
FblI	GTMKAC	2 cut(s)	1494, 1561
Fnu4HI	GCNGC	3 cut(s)	119, 931, 1333
FokI	GGATG	7 cut(s)	1271, 1549, 1657, 1690, 1837, 1840, 1961
FriOI	GRGCYC	2 cut(s)	261, 1911
Fsp4HI	GCNGC	3 cut(s)	119, 931, 1333
FspBI	CTAG	4 cut(s)	420, 975, 1218, 1395
GlaI	GCGC	2 cut(s)	1342, 1541
GluI	GCNGC	3 cut(s)	119, 931, 1333
GsuI	CTGGAG	1 cut(s)	1114
HaeIII	GGCC	3 cut(s)	72, 202, 874
HapII	CCGG	1 cut(s)	1355
HgaI	GACGC	1 cut(s)	1480
HhaI	GCGC	2 cut(s)	1343, 1542
Hin1I	GRCGYC	1 cut(s)	1491
Hin1II	CATG	7 cut(s)	61, 381, 410, 748, 802, 1072, 1484
Hin6I	GCGC	2 cut(s)	1341, 1540
HinP1I	GCGC	2 cut(s)	1341, 1540
HincII	GTYRAC	2 cut(s)	1562, 1686
HindII	GTYRAC	2 cut(s)	1562, 1686
HindIII	AAGCTT	1 cut(s)	641
HinfI	GANTC	4 cut(s)	338, 512, 548, 1242
HpaI	GTTAAC	1 cut(s)	1686
HpaII	CCGG	1 cut(s)	1355
HphI	GGTGA	2 cut(s)	313, 1258
Hpy166II	GTNNAC	4 cut(s)	148, 1495, 1562, 1686
Hpy8I	GTNNAC	4 cut(s)	148, 1495, 1562, 1686
Hpy99I	CGWCG	2 cut(s)	1563, 1621
HpyAV	CCTTC	7 cut(s)	7, 206, 829, 988, 1181, 1279, 1868
HpyCH4III	ACNGT	7 cut(s)	665, 1008, 1037, 1295, 1566, 1645, 1904
HpyF10VI	GCNNNNNNNGC	4 cut(s)	115, 1200, 1338, 1546
HpyF3I	CTNAG	9 cut(s)	95, 326, 388, 590, 869, 1146, 1175, 1366, 1811
Hsp92I	GRCGYC	1 cut(s)	1491
Hsp92II	CATG	7 cut(s)	61, 381, 410, 748, 802, 1072, 1484
HspAI	GCGC	2 cut(s)	1341, 1540
Ksp22I	TGATCA	2 cut(s)	358, 1692
KspAI	GTTAAC	1 cut(s)	1686
LguI	GCTCTTC	1 cut(s)	249
LmnI	GCTCC	1 cut(s)	586
Lsp1109I	GCAGC	3 cut(s)	130, 917, 1319
LweI	GCATC	3 cut(s)	1392, 1527, 1815
MaeI	CTAG	4 cut(s)	420, 975, 1218, 1395
MaeIII	GTNAC	5 cut(s)	787, 864, 1154, 1264, 1934
MbiI	CCGCTC	1 cut(s)	599
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	1 cut(s)	466
MhlI	GDGCHC	6 cut(s)	39, 261, 1004, 1488, 1881, 1911
MlyI	GAGTC	2 cut(s)	542, 1236
MmeI	TCCRAC	1 cut(s)	1818
MroXI	GAANNNNTTC	1 cut(s)	17
MseI	TTAA	5 cut(s)	498, 543, 962, 1604, 1685
MslI	CAYNNNNRTG	1 cut(s)	450
MspA1I	CMGCKG	1 cut(s)	1332
MspI	CCGG	1 cut(s)	1355
MspR9I	CCNGG	2 cut(s)	1355, 1675
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	1 cut(s)	1554
MvaI	CCWGG	1 cut(s)	1675
MwoI	GCNNNNNNNGC	4 cut(s)	115, 1200, 1338, 1546
NciI	CCSGG	1 cut(s)	1355
NdeI	CATATG	1 cut(s)	1337
NlaIII	CATG	7 cut(s)	61, 381, 410, 748, 802, 1072, 1484
NlaIV	GGNNCC	3 cut(s)	36, 169, 1920
NmuCI	GTSAC	1 cut(s)	1264
NspI	RCATGY	2 cut(s)	410, 748
PciSI	GCTCTTC	1 cut(s)	249
PctI	GAATGC	1 cut(s)	1554
PdmI	GAANNNNTTC	1 cut(s)	17
PfeI	GAWTC	2 cut(s)	338, 512
PfoI	TCCNGGA	1 cut(s)	1673
PkrI	GCNGC	3 cut(s)	120, 932, 1334
Ple19I	CGATCG	1 cut(s)	1249
PleI	GAGTC	2 cut(s)	542, 1236
PpsI	GAGTC	2 cut(s)	542, 1236
PshBI	ATTAAT	1 cut(s)	498
PsiI	TTATAA	2 cut(s)	66, 183
Psp124BI	GAGCTC	2 cut(s)	261, 1911
Psp6I	CCWGG	1 cut(s)	1673
PspGI	CCWGG	1 cut(s)	1673
PspN4I	GGNNCC	3 cut(s)	36, 169, 1920
PspPI	GGNCC	2 cut(s)	1320, 1918
PsrI	GAACNNNNNNTAC	2 cut(s)	698, 730
PstI	CTGCAG	1 cut(s)	1551
PstNI	CAGNNNCTG	1 cut(s)	395
PsuI	RGATCY	1 cut(s)	466
PvuI	CGATCG	1 cut(s)	1249
RsaI	GTAC	5 cut(s)	104, 707, 1198, 1610, 1901
RsaNI	GTAC	5 cut(s)	103, 706, 1197, 1609, 1900
RseI	CAYNNNNRTG	1 cut(s)	450
SacI	GAGCTC	2 cut(s)	261, 1911
SalI	GTCGAC	1 cut(s)	1560
SapI	GCTCTTC	1 cut(s)	249
SaqAI	TTAA	5 cut(s)	498, 543, 962, 1604, 1685
SatI	GCNGC	3 cut(s)	119, 931, 1333
Sau96I	GGNCC	2 cut(s)	1320, 1918
ScaI	AGTACT	2 cut(s)	1198, 1610
SchI	GAGTC	2 cut(s)	542, 1236
ScrFI	CCNGG	2 cut(s)	1355, 1675
SduI	GDGCHC	6 cut(s)	39, 261, 1004, 1488, 1881, 1911
SfaNI	GCATC	3 cut(s)	1392, 1527, 1815
SfcI	CTRYAG	3 cut(s)	457, 661, 1547
SinI	GGWCC	2 cut(s)	1320, 1918
SmiMI	CAYNNNNRTG	1 cut(s)	450
SmlI	CTYRAG	5 cut(s)	74, 196, 482, 1411, 1910
SmoI	CTYRAG	5 cut(s)	74, 196, 482, 1411, 1910
SsiI	CCGC	3 cut(s)	599, 1210, 1330
SspI	AATATT	1 cut(s)	1457
SspMI	CTAG	4 cut(s)	420, 975, 1218, 1395
SstI	GAGCTC	2 cut(s)	261, 1911
StyD4I	CCNGG	2 cut(s)	1353, 1673
StyI	CCWWGG	1 cut(s)	611
TaaI	ACNGT	7 cut(s)	665, 1008, 1037, 1295, 1566, 1645, 1904
TaqI	TCGA	7 cut(s)	559, 1134, 1245, 1249, 1281, 1561, 1616
TaqII	GACCGA	1 cut(s)	1906
TatI	WGTACW	3 cut(s)	102, 1196, 1608
TfiI	GAWTC	2 cut(s)	338, 512
Tru1I	TTAA	5 cut(s)	498, 543, 962, 1604, 1685
Tru9I	TTAA	5 cut(s)	498, 543, 962, 1604, 1685
TscAI	CASTG	2 cut(s)	1186, 1556
TseFI	GTSAC	1 cut(s)	1264
TseI	GCWGC	3 cut(s)	118, 930, 1332
Tsp45I	GTSAC	1 cut(s)	1264
TspDTI	ATGAA	8 cut(s)	17, 686, 713, 811, 875, 1001, 1733, 1850
TspRI	CASTG	2 cut(s)	1186, 1556
VpaK11BI	GGWCC	2 cut(s)	1320, 1918
VspI	ATTAAT	1 cut(s)	498
XapI	RAATTY	6 cut(s)	477, 629, 775, 829, 1772, 1841
XbaI	TCTAGA	1 cut(s)	419
XceI	RCATGY	2 cut(s)	410, 748
XmiI	GTMKAC	2 cut(s)	1494, 1561
XmnI	GAANNNNTTC	1 cut(s)	17
XspI	CTAG	4 cut(s)	420, 975, 1218, 1395
ZrmI	AGTACT	2 cut(s)	1198, 1610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.