pycom13g06700
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
4408784 .. 4410363
1580 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g06700.1

Sequence Viewer

Length: 426 bp
ATGGGCAACTGTTTAGGTTCTTCTGCTAAAGTCAATACCGCACATAGCTCCTTTGGAACTTCGGGATCAGGGGTTTCCAAAGTTTCCAGCAAAACTAACCCTTCCTCAGTTCCCTCCACTTTGACCGTCACATCGTATAGTGGAAGGAGCAATGCTTCAAGTCTTCCTACCCCAAGAACTGAAGGTGAAATATTGTCATCTCCAAATTTGAAACCCTTCTCATTCAATGAGCTAAAGACTGCCACCAGAAACTTTCGCCCTGACAGTCTTCTCGGTGAAGGAGGATTTGGTTATGTTTTCAAAGGATGGATTAATGGGAGCACAATGACAGCTTCAAAACCGGGGTCCGGAATGGTTGTTGCTGTCAAGAAGCTCAAACCCGAAGGTTTCCAAGGCCACAAGGAGTGGTTGTTCAGACAGAAGTAA

Protein Analysis

142

Amino Acids

14.87

Weight (kDa)

10.13

Isoelectric Point (pI)

29.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 347
AciI CCGC 1 cut(s) 39
AclWI GGATC 1 cut(s) 73
AcsI RAATTY 1 cut(s) 205
AcuI CTGAAG 1 cut(s) 201
AfiI CCNNNNNNNGG 1 cut(s) 347
AgsI TTSAA 5 cut(s) 159, 211, 226, 301, 336
AjuI GAANNNNNNNTTGG 2 cut(s) 270, 302
AloI GAACNNNNNNTCC 1 cut(s) 395
AluBI AGCT 4 cut(s) 48, 232, 332, 373
AluI AGCT 4 cut(s) 48, 232, 332, 373
Alw21I GWGCWC 1 cut(s) 323
AlwI GGATC 1 cut(s) 73
Aor13HI TCCGGA 1 cut(s) 347
AoxI GGCC 1 cut(s) 394
ApoI RAATTY 1 cut(s) 205
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
AseI ATTAAT 1 cut(s) 312
Asp700I GAANNNNTTC 1 cut(s) 215
AspS9I GGNCC 1 cut(s) 345
AsuC2I CCSGG 1 cut(s) 342
AsuHPI GGTGA 2 cut(s) 197, 287
AvaII GGWCC 1 cut(s) 345
BbsI GAAGAC 2 cut(s) 155, 260
Bbv12I GWGCWC 1 cut(s) 323
BccI CCATC 1 cut(s) 300
BcnI CCSGG 1 cut(s) 342
Bme1390I CCNGG 1 cut(s) 342
Bme18I GGWCC 1 cut(s) 345
BmgT120I GGNCC 1 cut(s) 345
BmiI GGNNCC 1 cut(s) 346
BmrFI CCNGG 1 cut(s) 342
BpiI GAAGAC 2 cut(s) 155, 260
BpuMI CCSGG 1 cut(s) 342
BsaJI CCNNGG 2 cut(s) 341, 391
BsaWI WCCGGW 1 cut(s) 347
BsaXI ACNNNNNCTCC 2 cut(s) 395, 425
Bsc4I CCNNNNNNNGG 1 cut(s) 347
Bse3DI GCAATG 1 cut(s) 157
BseAI TCCGGA 1 cut(s) 347
BseDI CCNNGG 2 cut(s) 341, 391
BseGI GGATG 1 cut(s) 311
BseLI CCNNNNNNNGG 1 cut(s) 347
BseMI GCAATG 1 cut(s) 157
BseMII CTCAG 1 cut(s) 120
BshFI GGCC 1 cut(s) 396
BsiHKAI GWGCWC 1 cut(s) 323
BsiSI CCGG 2 cut(s) 341, 348
BslI CCNNNNNNNGG 1 cut(s) 347
BsnI GGCC 1 cut(s) 396
Bsp1286I GDGCHC 1 cut(s) 323
Bsp13I TCCGGA 1 cut(s) 347
Bsp143I GATC 1 cut(s) 65
BspACI CCGC 1 cut(s) 39
BspANI GGCC 1 cut(s) 396
BspCNI CTCAG 1 cut(s) 119
BspEI TCCGGA 1 cut(s) 347
BspLI GGNNCC 1 cut(s) 346
BspPI GGATC 1 cut(s) 73
BsrDI GCAATG 1 cut(s) 157
BssECI CCNNGG 2 cut(s) 341, 391
BssMI GATC 1 cut(s) 65
BssT1I CCWWGG 1 cut(s) 391
Bst4CI ACNGT 3 cut(s) 11, 127, 266
BstDEI CTNAG 1 cut(s) 106
BstF5I GGATG 1 cut(s) 311
BstKTI GATC 1 cut(s) 68
BstMBI GATC 1 cut(s) 65
BstSCI CCNGG 1 cut(s) 340
BstV2I GAAGAC 2 cut(s) 155, 260
BsuRI GGCC 1 cut(s) 396
BtsCI GGATG 1 cut(s) 311
Cfr13I GGNCC 1 cut(s) 345
CviJI RGCY 5 cut(s) 48, 232, 332, 373, 396
CviKI_1 RGCY 5 cut(s) 48, 232, 332, 373, 396
DdeI CTNAG 1 cut(s) 106
DpnI GATC 1 cut(s) 67
DpnII GATC 1 cut(s) 65
Eco130I CCWWGG 1 cut(s) 391
Eco47I GGWCC 1 cut(s) 345
Eco57I CTGAAG 1 cut(s) 201
EcoT14I CCWWGG 1 cut(s) 391
ErhI CCWWGG 1 cut(s) 391
FaiI YATR 3 cut(s) 45, 138, 294
FokI GGATG 1 cut(s) 318
HaeIII GGCC 1 cut(s) 396
HapII CCGG 2 cut(s) 341, 348
HpaII CCGG 2 cut(s) 341, 348
HphI GGTGA 2 cut(s) 197, 287
Hpy188I TCNGA 1 cut(s) 416
Hpy188III TCNNGA 3 cut(s) 63, 348, 367
HpyAV CCTTC 6 cut(s) 111, 138, 176, 226, 272, 377
HpyCH4III ACNGT 3 cut(s) 11, 127, 266
HpyF3I CTNAG 1 cut(s) 106
Kpn2I TCCGGA 1 cut(s) 347
Kzo9I GATC 1 cut(s) 65
LmnI GCTCC 3 cut(s) 53, 147, 318
LpnPI CCDG 6 cut(s) 54, 100, 259, 273, 354, 361
MaeIII GTNAC 1 cut(s) 127
MalI GATC 1 cut(s) 67
MboI GATC 1 cut(s) 65
MboII GAAGA 3 cut(s) 12, 155, 260
MhlI GDGCHC 1 cut(s) 323
MluCI AATT 1 cut(s) 205
MnlI CCTC 3 cut(s) 115, 124, 275
MroI TCCGGA 1 cut(s) 347
MroXI GAANNNNTTC 1 cut(s) 215
MseI TTAA 1 cut(s) 312
MspI CCGG 2 cut(s) 341, 348
MspR9I CCNGG 1 cut(s) 342
NciI CCSGG 1 cut(s) 342
NdeII GATC 1 cut(s) 65
NlaIV GGNNCC 1 cut(s) 346
NmuCI GTSAC 1 cut(s) 127
PdmI GAANNNNTTC 1 cut(s) 215
PshBI ATTAAT 1 cut(s) 312
PspN4I GGNNCC 1 cut(s) 346
PspPI GGNCC 1 cut(s) 345
SaqAI TTAA 1 cut(s) 312
Sau3AI GATC 1 cut(s) 65
Sau96I GGNCC 1 cut(s) 345
ScrFI CCNGG 1 cut(s) 342
SduI GDGCHC 1 cut(s) 323
SetI ASST 7 cut(s) 19, 50, 187, 234, 334, 375, 388
SinI GGWCC 1 cut(s) 345
Sse9I AATT 1 cut(s) 205
SsiI CCGC 1 cut(s) 39
SspI AATATT 1 cut(s) 192
StyD4I CCNGG 1 cut(s) 340
StyI CCWWGG 1 cut(s) 391
TaaI ACNGT 3 cut(s) 11, 127, 266
TasI AATT 1 cut(s) 205
Tru1I TTAA 1 cut(s) 312
Tru9I TTAA 1 cut(s) 312
TseFI GTSAC 1 cut(s) 127
Tsp45I GTSAC 1 cut(s) 127
VpaK11BI GGWCC 1 cut(s) 345
VspI ATTAAT 1 cut(s) 312
XapI RAATTY 1 cut(s) 205
XmnI GAANNNNTTC 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.