Rorug01G0336000
ERF Family

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
45440462 .. 45446811
6350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0336000.1

Sequence Viewer

Length: 3054 bp
ATGGCTAGTGGGGGAAAGATAGATATGCTATCAACGCTAGATAATAATGTGCGAGGTTCAAATGGGAATTTAGAAGATGCTTTGCAGAGTGAGCTTGAGCTGATTCTAAGGGAGCAGCGCAATCAGCACGCCATTCATCGTGATAGGGAAATGAATATGTATAGGAGTGGCAGTGCACCGCCAACTGTGGAGGGATCCCTGAGTGCTGTGGGTAGTCTGTTTAGGAATTCTGATTTTAGGGATAGGGACATGAGAAGTAGGGTTAGTAGTAACAATGGGGGTTTGTCTGAAGATGAGATTCGCTCACATCCTGCTTACCTTTCGTACTATTATTCACATGACAATATCAACCCAAGATTGCCTCCGCCGTTGTTGTCAAGAGAGGATTGGCGTGTTGCGCAGAGGTTTCAGAGTGGGTCTACTTTTGAAGGTGCTGGAGATTGGAGGAAGAACAATTTAGTTGGCGATGGTGATAAGTCGTTGTTTTCAATGCAGCTGGGGCTTTCTGCACAGAAGGCAGATAATGACTTGATCAAATTTAGAAATGCCAATGGGAGTAGTATGCCTAGACAGACGTCATCCGAGTGGCTTGACAGAAATTCGAATAGTTTGACTGGATTCCCTACAAATGGACTTGGTGCAAGGAGGAAGAGTTTTGCTGACATTCTACAGGAAGGAAATGATCATCCAGCTTCCTTGTCAGGCCCCCTGTCAAGGCCATCAAGCCGTAATGCTTTTGGTGATGTTATGAATTCAACAGGCATGGCTGATCCACATCCAGTAGGGTTGTGTAATGGAGTGGATTCCATAGAGGGGTTGCACACCGGAGCAGTTCCACGTGGCTTGATAGGAATGCAGAGCCATGGTACCCCAGTTTCTCATTCCTTTGCATCTGCTGGAGGTCCTTCTTTGTCAAGAAGCAGAACCCCTGAACCACAATTATTTGGAAGTTCTGGTCTTCCTCCTGTGGGAAGAGCGTTTCCTAATGTTGCTGGTGCAGATATCCAAAATGATAGTTCGCCTGCCATGACTGAGTTGCCCAATATGACAACAAATTTATCTGGCTTAAGCCTCTCAAAAGTTAGATCTGCAGATGAAGATAGTCGTCTTCAGTCTCAGCTTCGTATGGACCTTCATAATCAGTGTGATTTTCTGTTCAACACACCAAACAGTCAGAATCAGAGGCTGCAGCAGCAACTGATAGAGAAGTCAAATGCTGAAAACTTTTCCCTTTCTACAAATTATGCTCATTTAGCAAATAAAAATGGGATTCTAACAAACCGTAATGCATCAAATGGGCATTTTCATTTTCCTAGAAGAACTTCTTCTCCCAGTCTTTACTCAAACGGGAGTCCTTCAGGACTTGGAACTTTGGAAGGGTTGAATGCTCATTACCAGGATGCAAATACCCCAGGAATCGACTTTGATGGTCATGCTGCCGGGGCATATCCTGTAAATCAGAAGTTGAACAATCATCTCGATGCAGGTTTTACTGGCAGTGGTGACGGACAAAGTATGAACAGATTAGGGAACAAAGTAGGGCCTGGCCTTCATTCTTCGTTTGTGGACCCATCATATATTCAGTTAATGCAAAGAACTGATTATGCAGCACATGCTCTGGCTAGTCCAAGTGGTTATTCTCTGAGTAAAAATAACTTTGGCAATTTGCATGGAGACTTAGAGGGGCTTCAGAAAGCATACCTTGAGGCAATACTTGCTCAAAGGAAGCAACAGTACGAGTTGTCCCTTTTAAGTCAATCTGGGGGGTTTGATCATGGTTATTTTGGGAATCCATCATATGGCCTTGGGATGACATATCCAGGAATCTCAGTGGCAAACTCTGTTCTTCCTTCTGTTGGATCTGGAAGTTCAATGTTTCAGAATGAGAAGATTTCCCGCTTTAATTCTATGATGAGAAGTTCAGCGGGAGGTTCAGTCAGCACCTGGCACTCAGATGCTGGAAATGACTTAGAAGGAAGACATGCATCATCATTATTAGATGAGTTCAAGAACAACAAGAATAAGTCTTTTGAACTTGCAGATATTGTTGATCACATAGTTGAATTCAGTACCGATCAGTATGGAAGTCGCTTTATCCAGCAGAAACTCGAAACTGCCACTGTAGAAGAAAAAATGAAAATATTCCCTGAGATTATTCCTCATGCTCGCACCTTGATGACTGATGTTTTTGGAAATTATGTCATACAGAAATTCTTTGAGCATGGTACAGAAAGCCAAAGAAACGAATTGACGAACCAACTTACTGGCCATGTTTTGCCTCTCAGTCTGCAAATGTATGGTTGTAGAGTGATTCAGAAGGCCTTGGAAGTTGTTGACAAGGATCATCAGGCTCAAATGGTGTCAGAACTCGATGGTTCAGTCATGAAATGTGTCCGGGATCAAAATGGGAATCACGTCATTCAGAAGAGTATAGAGTGTGTCCCTCAAGATCAAATTCAGTTCATCATTTCATCCTTCTATGGGCAAGTTGTCACACTGTCCACCCATCCTTATGGCTGCCGTGTCATACAGAGGGTTCTGGAACATTGTGATGACTCAAAGACGCAAGAAATTATCATGGATGAAGTCATGCAATCTGTATGCATTCTGGCACAGGATCAGTATGGGAATTATGTTATTCAGCACGTCCTTGAACATGGTAAACCACATGAACGGTCTGCAATTATTCACAAGCTTGCTGGACAAATTGTAAAGATGAGTCAGCAGAAGTTTGCTTCTAATGTTGTGGAAAAGTGCTTGACTTTTGGGAGTCCTGAGGAGCGCCAGTTGTTGGTGAAAGAGATGCTTGGTTCCACTGATGAAAATGAGCCATTGCAGGCCATGATGAAAGATCCATTTGGAAACTACGTCGTGCAGAAGGTTCTGGAGACCTGTGATGATCAGAGTCTTGAGTTAATTGTTTCTCGCATTAAGGTTCATTTGACTGCCTTGAAGAAGTACACCTATGGTAAACATATTGTTTCCCGTGTTGAGAAACTCATCACAACTGGAGAAAGGCGCATAGGATTGTCATCCTCAGTTTCTTCTTCCTGA

Protein Analysis

1017

Amino Acids

111.75

Weight (kDa)

6.23

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NABP PF07990 317 - 680 3.3e-105 Nucleic acid binding protein NABP
PUF PF00806 685 - 719 1.9e-11 Pumilio-family RNA binding repeat
PUF PF00806 723 - 754 1.7e-08 Pumilio-family RNA binding repeat
PUF PF00806 757 - 790 2.6e-09 Pumilio-family RNA binding repeat
PUF PF00806 829 - 863 7.8e-13 Pumilio-family RNA binding repeat
PUF PF00806 867 - 899 2.8e-09 Pumilio-family RNA binding repeat
PUF PF00806 902 - 935 1.8e-08 Pumilio-family RNA binding repeat
PUF PF00806 948 - 977 4.5e-07 Pumilio-family RNA binding repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 578
Acc16I TGCGCA 1 cut(s) 399
Acc36I ACCTGC 1 cut(s) 1475
Acc65I GGTACC 1 cut(s) 866
AccB1I GGYRCC 1 cut(s) 866
AccB7I CCANNNNNTGG 2 cut(s) 1799, 2791
AccI GTMKAC 1 cut(s) 419
AciI CCGC 4 cut(s) 179, 365, 1897, 1925
AclWI GGATC 8 cut(s) 189, 202, 764, 1867, 2349, 2406, 2625, 2846
AcoI YGGCCR 1 cut(s) 2266
AcsI RAATTY 9 cut(s) 67, 226, 536, 598, 751, 1054, 2063, 2210, 2454
AcuI CTGAAG 4 cut(s) 309, 1094, 1341, 1673
AcvI CACGTG 1 cut(s) 839
AcyI GRCGYC 1 cut(s) 575
AfaI GTAC 6 cut(s) 326, 868, 1736, 2071, 2227, 2960
AfiI CCNNNNNNNGG 8 cut(s) 629, 714, 813, 968, 1799, 1856, 2481, 2791
AflII CTTAAG 1 cut(s) 1066
AjiI CACGTC 2 cut(s) 2416, 2647
AjnI CCWGG 5 cut(s) 1395, 1411, 1543, 1819, 1943
AjuI GAANNNNNNNTTGG 2 cut(s) 1621, 1653
AloI GAACNNNNNNTCC 2 cut(s) 1312, 1344
AluBI AGCT 6 cut(s) 94, 100, 496, 692, 1120, 2695
AluI AGCT 6 cut(s) 94, 100, 496, 692, 1120, 2695
Alw21I GWGCWC 1 cut(s) 178
Alw26I GTCTC 3 cut(s) 1119, 1668, 2882
Alw44I GTGCAC 1 cut(s) 174
AlwI GGATC 8 cut(s) 189, 202, 764, 1867, 2349, 2406, 2625, 2846
AlwNI CAGNNNCTG 4 cut(s) 1186, 1198, 1944, 1958
AoxI GGCC 8 cut(s) 703, 716, 1541, 1546, 1801, 2266, 2319, 2838
ApaLI GTGCAC 1 cut(s) 174
ApeKI GCWGC 8 cut(s) 115, 493, 1186, 1189, 1192, 1436, 1607, 2517
ApoI RAATTY 9 cut(s) 67, 226, 536, 598, 751, 1054, 2063, 2210, 2454
Asp700I GAANNNNTTC 3 cut(s) 1321, 1324, 2141
Asp718I GGTACC 1 cut(s) 866
AspLEI GCGC 4 cut(s) 120, 400, 2784, 3021
AspS9I GGNCC 5 cut(s) 704, 902, 1129, 1541, 1567
AsuC2I CCSGG 2 cut(s) 1441, 2396
AsuHPI GGTGA 4 cut(s) 482, 752, 1514, 2806
AsuII TTCGAA 1 cut(s) 602
AvaII GGWCC 3 cut(s) 902, 1129, 1567
AxyI CCTNAGG 1 cut(s) 2775
BaeGI GKGCMC 1 cut(s) 178
BaeI ACNNNNGTAYC 2 cut(s) 858, 891
BalI TGGCCA 1 cut(s) 2268
BamHI GGATCC 1 cut(s) 194
BanI GGYRCC 1 cut(s) 866
BarI GAAGNNNNNNTAC 2 cut(s) 1718, 1750
BbrPI CACGTG 1 cut(s) 839
BbsI GAAGAC 3 cut(s) 950, 1100, 1984
Bbv12I GWGCWC 1 cut(s) 178
BbvI GCAGC 8 cut(s) 127, 505, 1173, 1201, 1204, 1423, 1619, 2504
BccI CCATC 7 cut(s) 461, 727, 1421, 1579, 1801, 2366, 2514
BceAI ACGGC 3 cut(s) 352, 711, 2505
BciT130I CCWGG 5 cut(s) 1397, 1413, 1545, 1821, 1945
BclI TGATCA 5 cut(s) 531, 682, 1771, 2050, 2899
BcnI CCSGG 2 cut(s) 1441, 2396
BcoDI GTCTC 3 cut(s) 1119, 1668, 2882
BfaI CTAG 5 cut(s) 6, 38, 567, 1314, 1623
BfmI CTRYAG 4 cut(s) 668, 1089, 1187, 2121
BfoI RGCGCY 1 cut(s) 2785
BfrI CTTAAG 1 cut(s) 1066
BfuAI ACCTGC 1 cut(s) 1475
BglII AGATCT 1 cut(s) 1085
BisI GCNGC 8 cut(s) 116, 494, 1187, 1190, 1193, 1437, 1608, 2518
BlsI GCNGC 8 cut(s) 117, 495, 1188, 1191, 1194, 1438, 1609, 2519
Bme1390I CCNGG 7 cut(s) 1397, 1413, 1441, 1545, 1821, 1945, 2396
Bme18I GGWCC 3 cut(s) 902, 1129, 1567
BmgBI CACGTC 2 cut(s) 2416, 2647
BmgT120I GGNCC 5 cut(s) 704, 902, 1129, 1541, 1567
BmiI GGNNCC 5 cut(s) 196, 706, 868, 1569, 2812
BmrFI CCNGG 7 cut(s) 1397, 1413, 1441, 1545, 1821, 1945, 2396
BmrI ACTGGG 2 cut(s) 866, 1326
BmsI GCATC 8 cut(s) 67, 899, 1298, 1390, 1471, 1945, 1994, 2793
BmuI ACTGGG 2 cut(s) 866, 1326
BoxI GACNNNNGTC 1 cut(s) 574
BpiI GAAGAC 3 cut(s) 950, 1100, 1984
BplI GAGNNNNNCTC 2 cut(s) 287, 319
BpmI CTGGAG 4 cut(s) 456, 918, 2906, 3030
Bpu14I TTCGAA 1 cut(s) 602
BpuEI CTTGAG 4 cut(s) 116, 1724, 2430, 2930
BpuMI CCSGG 2 cut(s) 1441, 2396
BsaAI YACGTR 1 cut(s) 839
BsaBI GATNNNNATC 2 cut(s) 774, 3031
BsaHI GRCGYC 1 cut(s) 575
BsaI GGTCTC 1 cut(s) 2882
BsaJI CCNNGG 5 cut(s) 862, 1411, 1440, 1804, 2322
BsaWI WCCGGW 1 cut(s) 824
Bsc4I CCNNNNNNNGG 8 cut(s) 629, 714, 813, 968, 1799, 1856, 2481, 2791
Bse1I ACTGG 8 cut(s) 619, 779, 872, 1332, 1498, 2269, 2785, 3013
Bse21I CCTNAGG 1 cut(s) 2775
Bse3DI GCAATG 1 cut(s) 2831
Bse8I GATNNNNATC 2 cut(s) 774, 3031
BseBI CCWGG 5 cut(s) 1397, 1413, 1545, 1821, 1945
BseDI CCNNGG 5 cut(s) 862, 1411, 1440, 1804, 2322
BseJI GATNNNNATC 2 cut(s) 774, 3031
BseLI CCNNNNNNNGG 8 cut(s) 629, 714, 813, 968, 1799, 1856, 2481, 2791
BseMI GCAATG 1 cut(s) 2831
BseNI ACTGG 8 cut(s) 619, 779, 872, 1332, 1498, 2269, 2785, 3013
BseRI GAGGAG 1 cut(s) 2792
BseSI GKGCMC 1 cut(s) 178
BseXI GCAGC 8 cut(s) 127, 505, 1173, 1201, 1204, 1423, 1619, 2504
BseYI CCCAGC 1 cut(s) 496
BsgI GTGCAG 3 cut(s) 492, 1017, 2894
BshFI GGCC 8 cut(s) 705, 718, 1543, 1548, 1803, 2268, 2321, 2840
BshNI GGYRCC 1 cut(s) 866
BsiHKAI GWGCWC 1 cut(s) 178
BsiSI CCGG 3 cut(s) 825, 1440, 2395
BslFI GGGAC 3 cut(s) 260, 1729, 2426
BslI CCNNNNNNNGG 8 cut(s) 629, 714, 813, 968, 1799, 1856, 2481, 2791
BsmAI GTCTC 3 cut(s) 1119, 1668, 2882
BsmFI GGGAC 3 cut(s) 260, 1729, 2426
BsmI GAATGC 3 cut(s) 858, 1390, 2604
BsnI GGCC 8 cut(s) 705, 718, 1543, 1548, 1803, 2268, 2321, 2840
Bso31I GGTCTC 1 cut(s) 2882
Bsp119I TTCGAA 1 cut(s) 602
Bsp1286I GDGCHC 1 cut(s) 178
Bsp19I CCATGG 1 cut(s) 862
BspACI CCGC 4 cut(s) 179, 365, 1897, 1925
BspANI GGCC 8 cut(s) 705, 718, 1543, 1548, 1803, 2268, 2321, 2840
BspHI TCATGA 1 cut(s) 2382
BspLI GGNNCC 5 cut(s) 196, 706, 868, 1569, 2812
BspMAI CTGCAG 2 cut(s) 1093, 1191
BspMI ACCTGC 1 cut(s) 1475
BspPI GGATC 8 cut(s) 189, 202, 764, 1867, 2349, 2406, 2625, 2846
BspQI GCTCTTC 1 cut(s) 967
BspT104I TTCGAA 1 cut(s) 602
BspT107I GGYRCC 1 cut(s) 866
BspTI CTTAAG 1 cut(s) 1066
BspTNI GGTCTC 1 cut(s) 2882
BsrDI GCAATG 1 cut(s) 2831
BsrI ACTGG 8 cut(s) 619, 779, 872, 1332, 1498, 2269, 2785, 3013
BssECI CCNNGG 5 cut(s) 862, 1411, 1440, 1804, 2322
BssNI GRCGYC 1 cut(s) 575
BssT1I CCWWGG 3 cut(s) 862, 1804, 2322
Bst2UI CCWGG 5 cut(s) 1397, 1413, 1545, 1821, 1945
Bst4CI ACNGT 7 cut(s) 187, 1172, 1283, 1734, 2122, 2499, 2676
Bst6I CTCTTC 3 cut(s) 644, 967, 2420
BstACI GRCGYC 1 cut(s) 575
BstAFI CTTAAG 1 cut(s) 1066
BstAPI GCANNNNNTGC 2 cut(s) 1613, 1715
BstBAI YACGTR 1 cut(s) 839
BstBI TTCGAA 1 cut(s) 602
BstC8I GCNNGC 5 cut(s) 129, 1023, 2167, 2697, 2838
BstDSI CCRYGG 1 cut(s) 862
BstH2I RGCGCY 1 cut(s) 2785
BstHHI GCGC 4 cut(s) 120, 400, 2784, 3021
BstMAI GTCTC 3 cut(s) 1119, 1668, 2882
BstNI CCWGG 5 cut(s) 1397, 1413, 1545, 1821, 1945
BstNSI RCATGY 2 cut(s) 1616, 1985
BstPAI GACNNNNGTC 1 cut(s) 574
BstSCI CCNGG 7 cut(s) 1395, 1411, 1439, 1543, 1819, 1943, 2394
BstSFI CTRYAG 4 cut(s) 668, 1089, 1187, 2121
BstSLI GKGCMC 1 cut(s) 178
BstV1I GCAGC 8 cut(s) 127, 505, 1173, 1201, 1204, 1423, 1619, 2504
BstV2I GAAGAC 3 cut(s) 950, 1100, 1984
BstX2I RGATCY 4 cut(s) 194, 1085, 1859, 2851
BstXI CCANNNNNNTGG 2 cut(s) 2264, 2513
BstYI RGATCY 4 cut(s) 194, 1085, 1859, 2851
Bsu36I CCTNAGG 1 cut(s) 2775
BsuRI GGCC 8 cut(s) 705, 718, 1543, 1548, 1803, 2268, 2321, 2840
BtgI CCRYGG 1 cut(s) 862
BtgZI GCGATG 1 cut(s) 480
BtrI CACGTC 2 cut(s) 2416, 2647
BtsI GCAGTG 2 cut(s) 178, 1504
BtsIMutI CAGTG 7 cut(s) 178, 1148, 1504, 1836, 2118, 2495, 2814
BveI ACCTGC 1 cut(s) 1475
Cac8I GCNNGC 5 cut(s) 129, 1023, 2167, 2697, 2838
CaiI CAGNNNCTG 4 cut(s) 1186, 1198, 1944, 1958
CciI TCATGA 1 cut(s) 2382
CfoI GCGC 4 cut(s) 120, 400, 2784, 3021
Cfr13I GGNCC 5 cut(s) 704, 902, 1129, 1541, 1567
CseI GACGC 1 cut(s) 2572
Csp6I GTAC 6 cut(s) 325, 867, 1735, 2070, 2226, 2959
CspCI CAANNNNNGTGG 2 cut(s) 825, 860
CviQI GTAC 6 cut(s) 325, 867, 1735, 2070, 2226, 2959
EaeI YGGCCR 1 cut(s) 2266
Eam1104I CTCTTC 3 cut(s) 644, 967, 2420
EarI CTCTTC 3 cut(s) 644, 967, 2420
EciI GGCGGA 1 cut(s) 354
Eco130I CCWWGG 3 cut(s) 862, 1804, 2322
Eco147I AGGCCT 1 cut(s) 2321
Eco31I GGTCTC 1 cut(s) 2882
Eco32I GATATC 1 cut(s) 1003
Eco47I GGWCC 3 cut(s) 902, 1129, 1567
Eco57I CTGAAG 4 cut(s) 309, 1094, 1341, 1673
Eco72I CACGTG 1 cut(s) 839
Eco81I CCTNAGG 1 cut(s) 2775
EcoO109I RGGNCCY 3 cut(s) 704, 902, 1541
EcoRI GAATTC 3 cut(s) 226, 751, 2063
EcoRII CCWGG 5 cut(s) 1395, 1411, 1543, 1819, 1943
EcoRV GATATC 1 cut(s) 1003
EcoT14I CCWWGG 3 cut(s) 862, 1804, 2322
EcoT22I ATGCAT 3 cut(s) 1291, 1987, 2606
ErhI CCWWGG 3 cut(s) 862, 1804, 2322
FalI AAGNNNNNCTT 6 cut(s) 1309, 1341, 1686, 1718, 2790, 2822
FaqI GGGAC 3 cut(s) 260, 1729, 2426
FauI CCCGC 2 cut(s) 1904, 1918
FauNDI CATATG 1 cut(s) 1798
FbaI TGATCA 5 cut(s) 531, 682, 1771, 2050, 2899
FblI GTMKAC 1 cut(s) 419
Fnu4HI GCNGC 8 cut(s) 116, 494, 1187, 1190, 1193, 1437, 1608, 2518
Fsp4HI GCNGC 8 cut(s) 116, 494, 1187, 1190, 1193, 1437, 1608, 2518
FspBI CTAG 5 cut(s) 6, 38, 567, 1314, 1623
FspI TGCGCA 1 cut(s) 399
GlaI GCGC 4 cut(s) 119, 399, 2783, 3020
GluI GCNGC 8 cut(s) 116, 494, 1187, 1190, 1193, 1437, 1608, 2518
GsaI CCCAGC 1 cut(s) 500
GsuI CTGGAG 4 cut(s) 456, 918, 2906, 3030
HaeII RGCGCY 1 cut(s) 2785
HaeIII GGCC 8 cut(s) 705, 718, 1543, 1548, 1803, 2268, 2321, 2840
HapII CCGG 3 cut(s) 825, 1440, 2395
HgaI GACGC 1 cut(s) 2572
HhaI GCGC 4 cut(s) 120, 400, 2784, 3021
Hin1I GRCGYC 1 cut(s) 575
Hin6I GCGC 4 cut(s) 118, 398, 2782, 3019
HinP1I GCGC 4 cut(s) 118, 398, 2782, 3019
HincII GTYRAC 1 cut(s) 2335
HindII GTYRAC 1 cut(s) 2335
HindIII AAGCTT 1 cut(s) 2693
HpaII CCGG 3 cut(s) 825, 1440, 2395
HphI GGTGA 4 cut(s) 482, 752, 1514, 2806
Hpy166II GTNNAC 8 cut(s) 176, 420, 1567, 2335, 2502, 2663, 2961, 2972
Hpy8I GTNNAC 8 cut(s) 176, 420, 1567, 2335, 2502, 2663, 2961, 2972
Hpy99I CGWCG 1 cut(s) 2873
HpyCH4III ACNGT 7 cut(s) 187, 1172, 1283, 1734, 2122, 2499, 2676
HpyCH4IV ACGT 5 cut(s) 575, 838, 2415, 2646, 2868
HpySE526I ACGT 5 cut(s) 575, 838, 2415, 2646, 2868
Hsp92I GRCGYC 1 cut(s) 575
HspAI GCGC 4 cut(s) 118, 398, 2782, 3019
KpnI GGTACC 1 cut(s) 870
Ksp22I TGATCA 5 cut(s) 531, 682, 1771, 2050, 2899
LguI GCTCTTC 1 cut(s) 967
LmnI GCTCC 3 cut(s) 112, 827, 2779
Lsp1109I GCAGC 8 cut(s) 127, 505, 1173, 1201, 1204, 1423, 1619, 2504
LweI GCATC 8 cut(s) 67, 899, 1298, 1390, 1471, 1945, 1994, 2793
MaeI CTAG 5 cut(s) 6, 38, 567, 1314, 1623
MaeII ACGT 5 cut(s) 575, 838, 2415, 2646, 2868
MaeIII GTNAC 3 cut(s) 269, 1502, 2491
MflI RGATCY 4 cut(s) 194, 1085, 1859, 2851
MhlI GDGCHC 1 cut(s) 178
MlsI TGGCCA 1 cut(s) 2268
MluNI TGGCCA 1 cut(s) 2268
MlyI GAGTC 5 cut(s) 1360, 2549, 2728, 2779, 2914
MmeI TCCRAC 1 cut(s) 1837
Mox20I TGGCCA 1 cut(s) 2268
Mph1103I ATGCAT 3 cut(s) 1291, 1987, 2606
MroXI GAANNNNTTC 3 cut(s) 1321, 1324, 2141
MscI TGGCCA 1 cut(s) 2268
MseI TTAA 6 cut(s) 1067, 1586, 1751, 1902, 2915, 2931
MslI CAYNNNNRTG 6 cut(s) 583, 1479, 1953, 2174, 2511, 2550
Msp20I TGGCCA 1 cut(s) 2268
MspA1I CMGCKG 2 cut(s) 496, 1925
MspCI CTTAAG 1 cut(s) 1066
MspI CCGG 3 cut(s) 825, 1440, 2395
MspR9I CCNGG 7 cut(s) 1397, 1413, 1441, 1545, 1821, 1945, 2396
Mva1269I GAATGC 3 cut(s) 858, 1390, 2604
MvaI CCWGG 5 cut(s) 1397, 1413, 1545, 1821, 1945
NciI CCSGG 2 cut(s) 1441, 2396
NcoI CCATGG 1 cut(s) 862
NdeI CATATG 1 cut(s) 1798
NlaIV GGNNCC 5 cut(s) 196, 706, 868, 1569, 2812
NmuCI GTSAC 2 cut(s) 1502, 2491
NsbI TGCGCA 1 cut(s) 399
NsiI ATGCAT 3 cut(s) 1291, 1987, 2606
NspI RCATGY 2 cut(s) 1616, 1985
NspV TTCGAA 1 cut(s) 602
PagI TCATGA 1 cut(s) 2382
PceI AGGCCT 1 cut(s) 2321
PciSI GCTCTTC 1 cut(s) 967
PctI GAATGC 3 cut(s) 858, 1390, 2604
PdmI GAANNNNTTC 3 cut(s) 1321, 1324, 2141
PflMI CCANNNNNTGG 2 cut(s) 1799, 2791
PfoI TCCNGGA 2 cut(s) 1819, 2394
PkrI GCNGC 8 cut(s) 117, 495, 1188, 1191, 1194, 1438, 1609, 2519
PleI GAGTC 5 cut(s) 1359, 2549, 2727, 2778, 2913
PmaCI CACGTG 1 cut(s) 839
PmlI CACGTG 1 cut(s) 839
PpsI GAGTC 5 cut(s) 1359, 2549, 2727, 2778, 2913
Ppu21I YACGTR 1 cut(s) 839
PpuMI RGGWCCY 1 cut(s) 902
PshAI GACNNNNGTC 1 cut(s) 574
Psp5II RGGWCCY 1 cut(s) 902
Psp6I CCWGG 5 cut(s) 1395, 1411, 1543, 1819, 1943
PspCI CACGTG 1 cut(s) 839
PspFI CCCAGC 1 cut(s) 496
PspGI CCWGG 5 cut(s) 1395, 1411, 1543, 1819, 1943
PspN4I GGNNCC 5 cut(s) 196, 706, 868, 1569, 2812
PspPI GGNCC 5 cut(s) 704, 902, 1129, 1541, 1567
PspPPI RGGWCCY 1 cut(s) 902
PstI CTGCAG 2 cut(s) 1093, 1191
PstNI CAGNNNCTG 4 cut(s) 1186, 1198, 1944, 1958
PsuI RGATCY 4 cut(s) 194, 1085, 1859, 2851
PvuII CAGCTG 1 cut(s) 496
RsaI GTAC 6 cut(s) 326, 868, 1736, 2071, 2227, 2960
RsaNI GTAC 6 cut(s) 325, 867, 1735, 2070, 2226, 2959
RseI CAYNNNNRTG 6 cut(s) 583, 1479, 1953, 2174, 2511, 2550
SapI GCTCTTC 1 cut(s) 967
SaqAI TTAA 6 cut(s) 1067, 1586, 1751, 1902, 2915, 2931
SatI GCNGC 8 cut(s) 116, 494, 1187, 1190, 1193, 1437, 1608, 2518
Sau96I GGNCC 5 cut(s) 704, 902, 1129, 1541, 1567
SchI GAGTC 5 cut(s) 1360, 2549, 2728, 2779, 2914
ScrFI CCNGG 7 cut(s) 1397, 1413, 1441, 1545, 1821, 1945, 2396
SduI GDGCHC 1 cut(s) 178
SfaNI GCATC 8 cut(s) 67, 899, 1298, 1390, 1471, 1945, 1994, 2793
SfcI CTRYAG 4 cut(s) 668, 1089, 1187, 2121
SfuI TTCGAA 1 cut(s) 602
SinI GGWCC 3 cut(s) 902, 1129, 1567
SmiMI CAYNNNNRTG 6 cut(s) 583, 1479, 1953, 2174, 2511, 2550
SmlI CTYRAG 5 cut(s) 95, 1066, 1703, 2445, 2909
SmoI CTYRAG 5 cut(s) 95, 1066, 1703, 2445, 2909
SseBI AGGCCT 1 cut(s) 2321
SsiI CCGC 4 cut(s) 179, 365, 1897, 1925
SspI AATATT 1 cut(s) 2142
SspMI CTAG 5 cut(s) 6, 38, 567, 1314, 1623
StuI AGGCCT 1 cut(s) 2321
StyD4I CCNGG 7 cut(s) 1395, 1411, 1439, 1543, 1819, 1943, 2394
StyI CCWWGG 3 cut(s) 862, 1804, 2322
TaaI ACNGT 7 cut(s) 187, 1172, 1283, 1734, 2122, 2499, 2676
TaiI ACGT 5 cut(s) 578, 841, 2418, 2649, 2871
TaqI TCGA 5 cut(s) 602, 1419, 1479, 2109, 2370
TatI WGTACW 1 cut(s) 2958
Tru1I TTAA 6 cut(s) 1067, 1586, 1751, 1902, 2915, 2931
Tru9I TTAA 6 cut(s) 1067, 1586, 1751, 1902, 2915, 2931
TscAI CASTG 7 cut(s) 178, 1148, 1504, 1836, 2125, 2502, 2821
TseFI GTSAC 2 cut(s) 1502, 2491
TseI GCWGC 8 cut(s) 115, 493, 1186, 1189, 1192, 1436, 1607, 2517
Tsp45I GTSAC 2 cut(s) 1502, 2491
TspGWI ACGGA 1 cut(s) 1521
TspRI CASTG 7 cut(s) 178, 1148, 1504, 1836, 2125, 2502, 2821
Van91I CCANNNNNTGG 2 cut(s) 1799, 2791
Vha464I CTTAAG 1 cut(s) 1066
VneI GTGCAC 1 cut(s) 174
VpaK11BI GGWCC 3 cut(s) 902, 1129, 1567
XapI RAATTY 9 cut(s) 67, 226, 536, 598, 751, 1054, 2063, 2210, 2454
XceI RCATGY 2 cut(s) 1616, 1985
XmiI GTMKAC 1 cut(s) 419
XmnI GAANNNNTTC 3 cut(s) 1321, 1324, 2141
XspI CTAG 5 cut(s) 6, 38, 567, 1314, 1623
ZraI GACGTC 1 cut(s) 576
Zsp2I ATGCAT 3 cut(s) 1291, 1987, 2606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.