Rh1DG336200

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000305
Physical Location & Seq
Forward (+)
56184585 .. 56190344
5760 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG336200.1

Sequence Viewer

Length: 2079 bp
ATGTCTCGTGGCGGCTTGGATAATCATATATTTGGAAGGGATTCTTGTCTTCAACCACTTTCATGGAACCTGCGTATGAAGATTTCCCTTGAGGCTGCTAATGTTCTAGCATTTCTTCACAATGGTGAGGAAACAGTAATCCATCGGGACATTACAAGTTCTAATATCCTGTTGGATTCAACTTACAATGCCAAACTCGCTGACTTTGGTTTAGCGAAGGATGGAGCCGCAGGTGATAAAAGCCATGTTTCAACAGCAGTGATGGGGACACATGGGTATGCTGCTCCTGAGTATATTGCTACAGGTGTCTCTAGTTTACAGTTCTTTTCTTCTTCTTTGATTAACCATGTAAACTGCTACTTACTTTGTTTACCAGAAACTATGACAAGTTATTATGCCTTCTTTCTGATAATTGTTTATGTTGAAGGTCATTTAACTGCCAAATGTGATGTATATGGGTTTGGAGTTGTGATGCTCGAAATGCTGTCTGGAAGACGTAGTCTGGACCAAAGCCTGCCGACTGTGCAACAGAATTTAGTCGACTGGGCCAAACCTTACCTCGCCAGCAAACGCAGAGTTCTCAAAGTTTTTGATCCTCGTTTAAAAGGCCAGTACTCTGTGGCTGGAGCTCTTAAAGCAGCTAATCTTGCAAAACAATGCTTATCAGAAGAACCTGAGTTTAGGCCAAACATGACTGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAACCTGAAGACATGAAGGCTAGGGTTCCTGGCTTTCAAATAGGGAGAGGTGCTATGAGTGGTGGGATTCGTACAAGCGTGAAGGGGTTCCTTAATGCAAAACGCCTGGCTTTGTCTGCAGAAATAGATACGGTGCATGAGACGAATGAGACCATCACTCGCAATTTCAGTGCACTACAAGCTGCTGCTGATTCTGTGGATGAGAAGAAAGCACAAGAGAAGAGCATTGCTTCAACTTCATATGGCCTCAGTATCTATGATGTGCCTTCAATTCCTTGGACACAGAATGAGATCTTGCCAAGAAGATTCTTCTATAATGAACTGAAAACAGCGACCTGGAACTTTCATCCTCATAATAAGCTGGGTGAAGGTAGTTTTGGTCCTGTTTTTAAGGGGTGGATTGATGACAATACATCAACAGCTTCCAAGCCTGGTACTGGCATGGTAATTGCTGTGAAGACAATTAACCGAGGAGGTTTACAGGGTAACAAGGAATGGTTGACAGAAATTTACTACCTAGGAAGGCTGCATCATCCAAATGTTGTGAAATTGTTGGGTTATTGCTTCGAGGATGACCACCGGTTTCTGGTTTATGAATTTATGGCTAAAGGATGCTTGGAGTTTCATCTATTTAAATTTGAAATAGGGTTTTCTTACCATCAACCACTTTCGTGGATCCTGCGTATGAAGATTGCCCTTGGTGCTGCCAAGTCTCTAGCATTTATTCATAATAGTGAGGGAAAAGTGATCCATCGGGACTTCAAAAGTTCTAATATCCTACTGGATTCAAACTACAATGCCAAACTCTCTGATTTTGGTTTTGCTAAGGACGGACCAGCAGGTGATAGTAGCCATGTCTCGACAAGGGTGATGGGGACATATGGGTATGCAGCTCCAGAGTATGTTGCTACAGGTCATTTAACCAGCAAAAATGATGTGTATGGTTTCGGAGTTGTTATGCTCGAATTGTTGACTGGAAAACCAGTTCTTGACACTAGCCGGCCAACCAGGGAACAAGATCTAGTTGAATGGGCCAAACCATACCTTGCCAGCAAACGCGGAGTTCTTAAAATTTTTGATGCTCGTATTAAAGGCCAGTATTCTGTGGCTGCAGCTCGTAAAGCGGCTAACCTTGCAAATCAATGCTTATCAGCAGAACCCGAGTTGAGGCCAAACATGAATGAGGTGGTAAAAGAATTAGAGCAGCTTCAGGAATCAGATGACATTGAGGGCGCAGGAATCTCTTATAGCGAGCCTTGCCAATCTCCTTATTCCAATTCAAGCAGTCTCAAATCAAGCGGGAGAAGTTGGATCAGCTTCAGGTCATCTGCTTCTCGCAGCTACATAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

692

Amino Acids

76.59

Weight (kDa)

7.94

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 17 - 103 8.9e-12 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 27 - 100 1e-14 Protein kinase domain
Pkinase PF00069 358 - 640 1.1e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 360 - 642 9.5e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 221, 1556
Acc36I ACCTGC 3 cut(s) 78, 221, 1556
AccI GTMKAC 1 cut(s) 540
AccII CGCG 1 cut(s) 1785
AciI CCGC 5 cut(s) 12, 228, 1785, 1850, 2025
AclWI GGATC 5 cut(s) 587, 1396, 1409, 1468, 2045
AcoI YGGCCR 1 cut(s) 1727
AcsI RAATTY 5 cut(s) 532, 1233, 1322, 1361, 1797
AcuI CTGAAG 4 cut(s) 707, 753, 1919, 2029
AfaI GTAC 3 cut(s) 614, 799, 1162
AfiI CCNNNNNNNGG 3 cut(s) 1163, 1312, 1893
AgeI ACCGGT 1 cut(s) 1305
AjnI CCWGG 5 cut(s) 754, 831, 1061, 1156, 1733
AjuI GAANNNNNNNTTGG 2 cut(s) 1086, 1118
AleI CACNNNNGTG 2 cut(s) 123, 1396
AloI GAACNNNNNNTCC 2 cut(s) 1695, 1727
Alw21I GWGCWC 2 cut(s) 631, 901
Alw26I GTCTC 7 cut(s) 9, 313, 860, 869, 1443, 1588, 2018
Alw44I GTGCAC 1 cut(s) 897
AlwI GGATC 5 cut(s) 587, 1396, 1409, 1468, 2045
Ama87I CYCGRG 1 cut(s) 1886
AoxI GGCC 8 cut(s) 546, 607, 683, 970, 1727, 1758, 1819, 1895
ApaLI GTGCAC 1 cut(s) 897
ApoI RAATTY 5 cut(s) 532, 1233, 1322, 1361, 1797
AsiGI ACCGGT 1 cut(s) 1305
Asp700I GAANNNNTTC 2 cut(s) 40, 812
AspA2I CCTAGG 1 cut(s) 1243
AspLEI GCGC 1 cut(s) 1961
AspS9I GGNCC 5 cut(s) 505, 546, 1106, 1559, 1758
AsuHPI GGTGA 5 cut(s) 137, 245, 1103, 1580, 1606
AvaI CYCGRG 1 cut(s) 1886
AvaII GGWCC 3 cut(s) 505, 1106, 1559
AvrII CCTAGG 1 cut(s) 1243
BaeGI GKGCMC 1 cut(s) 901
BamHI GGATCC 1 cut(s) 1401
BanII GRGCYC 1 cut(s) 631
BauI CACGAG 1 cut(s) 6
BbsI GAAGAC 4 cut(s) 41, 499, 741, 1190
Bbv12I GWGCWC 2 cut(s) 631, 901
BccI CCATC 7 cut(s) 150, 215, 256, 887, 1392, 1485, 1591
BciT130I CCWGG 5 cut(s) 756, 833, 1063, 1158, 1735
BcoDI GTCTC 7 cut(s) 9, 313, 860, 869, 1443, 1588, 2018
BfaI CTAG 7 cut(s) 107, 312, 747, 1244, 1442, 1722, 1748
BfmI CTRYAG 4 cut(s) 300, 843, 1635, 1836
BfuAI ACCTGC 3 cut(s) 78, 221, 1556
BglII AGATCT 2 cut(s) 1017, 1744
BlnI CCTAGG 1 cut(s) 1243
BmcAI AGTACT 1 cut(s) 614
Bme1390I CCNGG 5 cut(s) 756, 833, 1063, 1158, 1735
Bme18I GGWCC 3 cut(s) 505, 1106, 1559
BmeT110I CYCGRG 1 cut(s) 1886
BmgT120I GGNCC 5 cut(s) 505, 546, 1106, 1559, 1758
BmiI GGNNCC 6 cut(s) 68, 226, 729, 753, 815, 1403
BmrFI CCNGG 5 cut(s) 756, 833, 1063, 1158, 1735
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 4 cut(s) 462, 1264, 1328, 1795
BmuI ACTGGG 1 cut(s) 553
BpiI GAAGAC 4 cut(s) 41, 499, 741, 1190
BpmI CTGGAG 2 cut(s) 645, 1605
Bpu10I CCTNAGC 1 cut(s) 1551
BpuEI CTTGAG 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 869
BsaJI CCNNGG 5 cut(s) 1001, 1195, 1243, 1423, 1734
BsaWI WCCGGW 1 cut(s) 1305
Bsc4I CCNNNNNNNGG 3 cut(s) 1163, 1312, 1893
Bse118I RCCGGY 2 cut(s) 1305, 1725
Bse1I ACTGG 7 cut(s) 548, 610, 1168, 1512, 1705, 1709, 1822
Bse3DI GCAATG 1 cut(s) 951
BseBI CCWGG 5 cut(s) 756, 833, 1063, 1158, 1735
BseDI CCNNGG 5 cut(s) 1001, 1195, 1243, 1423, 1734
BseGI GGATG 6 cut(s) 226, 931, 1072, 1258, 1303, 1343
BseLI CCNNNNNNNGG 3 cut(s) 1163, 1312, 1893
BseMI GCAATG 1 cut(s) 951
BseMII CTCAG 4 cut(s) 279, 666, 687, 988
BseNI ACTGG 7 cut(s) 548, 610, 1168, 1512, 1705, 1709, 1822
BseRI GAGGAG 1 cut(s) 1212
BseSI GKGCMC 1 cut(s) 901
BseYI CCCAGC 1 cut(s) 1087
Bsh1236I CGCG 1 cut(s) 1785
BshFI GGCC 8 cut(s) 548, 609, 685, 972, 1729, 1760, 1821, 1897
BshTI ACCGGT 1 cut(s) 1305
BsiHKAI GWGCWC 2 cut(s) 631, 901
BsiHKCI CYCGRG 1 cut(s) 1886
BsiSI CCGG 2 cut(s) 1306, 1726
BslFI GGGAC 4 cut(s) 161, 280, 1496, 1615
BslI CCNNNNNNNGG 3 cut(s) 1163, 1312, 1893
BsmAI GTCTC 7 cut(s) 9, 313, 860, 869, 1443, 1588, 2018
BsmBI CGTCTC 1 cut(s) 860
BsmFI GGGAC 4 cut(s) 161, 280, 1496, 1615
BsnI GGCC 8 cut(s) 548, 609, 685, 972, 1729, 1760, 1821, 1897
Bso31I GGTCTC 1 cut(s) 869
BsoBI CYCGRG 1 cut(s) 1886
Bsp1286I GDGCHC 2 cut(s) 631, 901
Bsp143I GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
BspACI CCGC 5 cut(s) 12, 228, 1785, 1850, 2025
BspANI GGCC 8 cut(s) 548, 609, 685, 972, 1729, 1760, 1821, 1897
BspCNI CTCAG 4 cut(s) 280, 667, 688, 987
BspFNI CGCG 1 cut(s) 1785
BspLI GGNNCC 6 cut(s) 68, 226, 729, 753, 815, 1403
BspMAI CTGCAG 2 cut(s) 847, 1840
BspMI ACCTGC 3 cut(s) 78, 221, 1556
BspPI GGATC 5 cut(s) 587, 1396, 1409, 1468, 2045
BspQI GCTCTTC 1 cut(s) 941
BspTNI GGTCTC 1 cut(s) 869
BsrDI GCAATG 1 cut(s) 951
BsrFI RCCGGY 2 cut(s) 1305, 1725
BsrI ACTGG 7 cut(s) 548, 610, 1168, 1512, 1705, 1709, 1822
BssAI RCCGGY 2 cut(s) 1305, 1725
BssECI CCNNGG 5 cut(s) 1001, 1195, 1243, 1423, 1734
BssMI GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
BssSI CACGAG 1 cut(s) 6
BssT1I CCWWGG 3 cut(s) 1001, 1243, 1423
Bst2BI CACGAG 1 cut(s) 6
Bst2UI CCWGG 5 cut(s) 756, 833, 1063, 1158, 1735
Bst4CI ACNGT 4 cut(s) 136, 321, 523, 859
Bst6I CTCTTC 1 cut(s) 941
BstC8I GCNNGC 5 cut(s) 515, 565, 1727, 1777, 1979
BstDEI CTNAG 5 cut(s) 288, 675, 696, 974, 1551
BstF5I GGATG 6 cut(s) 226, 931, 1072, 1258, 1303, 1343
BstFNI CGCG 1 cut(s) 1785
BstHHI GCGC 1 cut(s) 1961
BstKTI GATC 6 cut(s) 595, 1020, 1404, 1476, 1747, 2040
BstMAI GTCTC 7 cut(s) 9, 313, 860, 869, 1443, 1588, 2018
BstMBI GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
BstNI CCWGG 5 cut(s) 756, 833, 1063, 1158, 1735
BstSCI CCNGG 5 cut(s) 754, 831, 1061, 1156, 1733
BstSFI CTRYAG 4 cut(s) 300, 843, 1635, 1836
BstSLI GKGCMC 1 cut(s) 901
BstUI CGCG 1 cut(s) 1785
BstV2I GAAGAC 4 cut(s) 41, 499, 741, 1190
BstX2I RGATCY 3 cut(s) 1017, 1401, 1744
BstXI CCANNNNNNTGG 2 cut(s) 63, 1398
BstYI RGATCY 3 cut(s) 1017, 1401, 1744
BsuRI GGCC 8 cut(s) 548, 609, 685, 972, 1729, 1760, 1821, 1897
BtsCI GGATG 6 cut(s) 226, 931, 1072, 1258, 1303, 1343
BtsI GCAGTG 1 cut(s) 264
BtsIMutI CAGTG 2 cut(s) 264, 901
BveI ACCTGC 3 cut(s) 78, 221, 1556
Cac8I GCNNGC 5 cut(s) 515, 565, 1727, 1777, 1979
CfoI GCGC 1 cut(s) 1961
Cfr10I RCCGGY 2 cut(s) 1305, 1725
Cfr13I GGNCC 5 cut(s) 505, 546, 1106, 1559, 1758
Csp6I GTAC 3 cut(s) 613, 798, 1161
CspAI ACCGGT 1 cut(s) 1305
CviQI GTAC 3 cut(s) 613, 798, 1161
DdeI CTNAG 5 cut(s) 288, 675, 696, 974, 1551
DpnI GATC 6 cut(s) 594, 1019, 1403, 1475, 1746, 2039
DpnII GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
DraI TTTAAA 2 cut(s) 603, 1360
EaeI YGGCCR 1 cut(s) 1727
Eam1104I CTCTTC 1 cut(s) 941
EarI CTCTTC 1 cut(s) 941
Ecl136II GAGCTC 1 cut(s) 629
Eco130I CCWWGG 3 cut(s) 1001, 1243, 1423
Eco24I GRGCYC 1 cut(s) 631
Eco31I GGTCTC 1 cut(s) 869
Eco47I GGWCC 3 cut(s) 505, 1106, 1559
Eco53kI GAGCTC 1 cut(s) 629
Eco57I CTGAAG 4 cut(s) 707, 753, 1919, 2029
Eco88I CYCGRG 1 cut(s) 1886
EcoICRI GAGCTC 1 cut(s) 629
EcoRII CCWGG 5 cut(s) 754, 831, 1061, 1156, 1733
EcoT14I CCWWGG 3 cut(s) 1001, 1243, 1423
EcoT38I GRGCYC 1 cut(s) 631
ErhI CCWWGG 3 cut(s) 1001, 1243, 1423
Esp3I CGTCTC 1 cut(s) 860
FalI AAGNNNNNCTT 2 cut(s) 28, 60
FaqI GGGAC 4 cut(s) 161, 280, 1496, 1615
FauI CCCGC 1 cut(s) 2018
FauNDI CATATG 2 cut(s) 967, 1606
FblI GTMKAC 1 cut(s) 540
FokI GGATG 6 cut(s) 233, 938, 1059, 1245, 1310, 1350
FriOI GRGCYC 1 cut(s) 631
FspBI CTAG 7 cut(s) 107, 312, 747, 1244, 1442, 1722, 1748
GlaI GCGC 1 cut(s) 1960
GsaI CCCAGC 1 cut(s) 1091
GsuI CTGGAG 2 cut(s) 645, 1605
HaeIII GGCC 8 cut(s) 548, 609, 685, 972, 1729, 1760, 1821, 1897
HapII CCGG 2 cut(s) 1306, 1726
HhaI GCGC 1 cut(s) 1961
Hin6I GCGC 1 cut(s) 1959
HinP1I GCGC 1 cut(s) 1959
HincII GTYRAC 3 cut(s) 541, 1227, 1698
HindII GTYRAC 3 cut(s) 541, 1227, 1698
HinfI GANTC 8 cut(s) 41, 176, 793, 917, 1032, 1511, 1940, 1965
HpaII CCGG 2 cut(s) 1306, 1726
HphI GGTGA 5 cut(s) 137, 245, 1103, 1580, 1606
Hpy166II GTNNAC 8 cut(s) 317, 352, 371, 541, 899, 1205, 1227, 1698
Hpy188I TCNGA 5 cut(s) 408, 667, 1537, 1676, 1945
Hpy8I GTNNAC 8 cut(s) 317, 352, 371, 541, 899, 1205, 1227, 1698
HpyAV CCTTC 9 cut(s) 30, 211, 409, 419, 736, 802, 1002, 1088, 1242
HpyCH4III ACNGT 4 cut(s) 136, 321, 523, 859
HpyCH4IV ACGT 1 cut(s) 496
HpyF3I CTNAG 5 cut(s) 288, 675, 696, 974, 1551
HpySE526I ACGT 1 cut(s) 496
HspAI GCGC 1 cut(s) 1959
KroI GCCGGC 1 cut(s) 1725
KroNI GCCGGC 1 cut(s) 1727
Kzo9I GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
LguI GCTCTTC 1 cut(s) 941
LmnI GCTCC 5 cut(s) 224, 289, 626, 715, 1624
LweI GCATC 4 cut(s) 462, 1264, 1328, 1795
MaeI CTAG 7 cut(s) 107, 312, 747, 1244, 1442, 1722, 1748
MaeII ACGT 1 cut(s) 496
MaeIII GTNAC 1 cut(s) 1211
MalI GATC 6 cut(s) 594, 1019, 1403, 1475, 1746, 2039
MboI GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
MflI RGATCY 3 cut(s) 1017, 1401, 1744
MhlI GDGCHC 2 cut(s) 631, 901
MmeI TCCRAC 2 cut(s) 153, 2015
MroNI GCCGGC 1 cut(s) 1725
MroXI GAANNNNTTC 2 cut(s) 40, 812
MslI CAYNNNNRTG 6 cut(s) 61, 123, 276, 1263, 1396, 1458
MspI CCGG 2 cut(s) 1306, 1726
MspR9I CCNGG 5 cut(s) 756, 833, 1063, 1158, 1735
MvaI CCWGG 5 cut(s) 756, 833, 1063, 1158, 1735
MvnI CGCG 1 cut(s) 1785
NaeI GCCGGC 1 cut(s) 1727
NdeI CATATG 2 cut(s) 967, 1606
NdeII GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
NgoMIV GCCGGC 1 cut(s) 1725
NlaIV GGNNCC 6 cut(s) 68, 226, 729, 753, 815, 1403
OliI CACNNNNGTG 2 cut(s) 123, 1396
PaqCI CACCTGC 2 cut(s) 221, 1556
PciSI GCTCTTC 1 cut(s) 941
PdiI GCCGGC 1 cut(s) 1727
PdmI GAANNNNTTC 2 cut(s) 40, 812
PfeI GAWTC 8 cut(s) 41, 176, 793, 917, 1032, 1511, 1940, 1965
PflFI GACNNNGTC 1 cut(s) 498
PinAI ACCGGT 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 631
Psp6I CCWGG 5 cut(s) 754, 831, 1061, 1156, 1733
PspFI CCCAGC 1 cut(s) 1087
PspGI CCWGG 5 cut(s) 754, 831, 1061, 1156, 1733
PspN4I GGNNCC 6 cut(s) 68, 226, 729, 753, 815, 1403
PspPI GGNCC 5 cut(s) 505, 546, 1106, 1559, 1758
PstI CTGCAG 2 cut(s) 847, 1840
PsuI RGATCY 3 cut(s) 1017, 1401, 1744
PsyI GACNNNGTC 1 cut(s) 498
RsaI GTAC 3 cut(s) 614, 799, 1162
RsaNI GTAC 3 cut(s) 613, 798, 1161
RseI CAYNNNNRTG 6 cut(s) 61, 123, 276, 1263, 1396, 1458
SacI GAGCTC 1 cut(s) 631
SalI GTCGAC 1 cut(s) 539
SapI GCTCTTC 1 cut(s) 941
Sau3AI GATC 6 cut(s) 592, 1017, 1401, 1473, 1744, 2037
Sau96I GGNCC 5 cut(s) 505, 546, 1106, 1559, 1758
ScaI AGTACT 1 cut(s) 614
ScrFI CCNGG 5 cut(s) 756, 833, 1063, 1158, 1735
SduI GDGCHC 2 cut(s) 631, 901
SfaNI GCATC 4 cut(s) 462, 1264, 1328, 1795
SfcI CTRYAG 4 cut(s) 300, 843, 1635, 1836
SinI GGWCC 3 cut(s) 505, 1106, 1559
SmiI ATTTAAAT 1 cut(s) 1360
SmiMI CAYNNNNRTG 6 cut(s) 61, 123, 276, 1263, 1396, 1458
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
SsiI CCGC 5 cut(s) 12, 228, 1785, 1850, 2025
SspMI CTAG 7 cut(s) 107, 312, 747, 1244, 1442, 1722, 1748
SstI GAGCTC 1 cut(s) 631
StyD4I CCNGG 5 cut(s) 754, 831, 1061, 1156, 1733
StyI CCWWGG 3 cut(s) 1001, 1243, 1423
SwaI ATTTAAAT 1 cut(s) 1360
TaaI ACNGT 4 cut(s) 136, 321, 523, 859
TaiI ACGT 1 cut(s) 499
TaqI TCGA 5 cut(s) 477, 540, 1293, 1586, 1689
TatI WGTACW 1 cut(s) 612
TauI GCSGC 3 cut(s) 15, 230, 1853
TfiI GAWTC 8 cut(s) 41, 176, 793, 917, 1032, 1511, 1940, 1965
TscAI CASTG 2 cut(s) 264, 901
TspGWI ACGGA 1 cut(s) 1572
TspRI CASTG 2 cut(s) 264, 901
Tth111I GACNNNGTC 1 cut(s) 498
VneI GTGCAC 1 cut(s) 897
VpaK11BI GGWCC 3 cut(s) 505, 1106, 1559
XapI RAATTY 5 cut(s) 532, 1233, 1322, 1361, 1797
XmaJI CCTAGG 1 cut(s) 1243
XmiI GTMKAC 1 cut(s) 540
XmnI GAANNNNTTC 2 cut(s) 40, 812
XspI CTAG 7 cut(s) 107, 312, 747, 1244, 1442, 1722, 1748
ZrmI AGTACT 1 cut(s) 614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.