Rorug05G0114800

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
10229330 .. 10230041
712 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0114800.1

Sequence Viewer

Length: 441 bp
ATGCTCAACAAACAGAACTTGAGGCTAAGTTTGACAACACGCGATGACTTGAGGGAAAGTTTGAGAACATGTGATGAGGAAGCACTTGCTATATCAAGAACAATGCAGGATTTACACCACCTCAAGCTTATCGGAAATAGGCCGACTAATGATGGCTTGAGGAAAATTATTGATTCTTGTACTAATCTCGAGTCACTTGATTTGCGTTGCTGTTACCATCTTAATCTAGCAGAAGATTTGGGAAGATGTGCTGAACAAATTAAAAGCTTGCGGCTTCCCAACGATTCCGTTGACGACATGGACTATCTTTCTTCAACTACAGTTAATTGTCACATAGCACCTTATAAGGATGACTACTCAGATTTTGATGAGGAGGAGGATGACGACTCAGAGTTTGATGATGAGGAGGACTACATAGATATTAAGGCTCTGATCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

146

Amino Acids

16.88

Weight (kDa)

4.31

Isoelectric Point (pI)

56.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 345
AccII CGCG 1 cut(s) 42
AciI CCGC 1 cut(s) 271
AfaI GTAC 1 cut(s) 181
AflIII ACRYGT 1 cut(s) 68
AgsI TTSAA 1 cut(s) 315
AluBI AGCT 2 cut(s) 127, 267
AluI AGCT 2 cut(s) 127, 267
Ama87I CYCGRG 1 cut(s) 188
AoxI GGCC 1 cut(s) 140
ArsI GACNNNNNNTTYG 2 cut(s) 377, 409
AvaI CYCGRG 1 cut(s) 188
BccI CCATC 2 cut(s) 146, 225
BfaI CTAG 1 cut(s) 227
BfmI CTRYAG 1 cut(s) 318
BisI GCNGC 1 cut(s) 272
BlsI GCNGC 1 cut(s) 273
BmeT110I CYCGRG 1 cut(s) 188
BpuEI CTTGAG 4 cut(s) 40, 70, 107, 178
BseGI GGATG 2 cut(s) 355, 385
BseMII CTCAG 2 cut(s) 372, 402
BseRI GAGGAG 3 cut(s) 386, 389, 419
Bsh1236I CGCG 1 cut(s) 42
BshFI GGCC 1 cut(s) 142
BsiHKCI CYCGRG 1 cut(s) 188
BsnI GGCC 1 cut(s) 142
BsoBI CYCGRG 1 cut(s) 188
Bsp143I GATC 1 cut(s) 432
BspACI CCGC 1 cut(s) 271
BspANI GGCC 1 cut(s) 142
BspCNI CTCAG 2 cut(s) 371, 401
BspFNI CGCG 1 cut(s) 42
BssMI GATC 1 cut(s) 432
Bst4CI ACNGT 1 cut(s) 322
BstC8I GCNNGC 1 cut(s) 269
BstDEI CTNAG 3 cut(s) 26, 358, 388
BstF5I GGATG 2 cut(s) 355, 385
BstFNI CGCG 1 cut(s) 42
BstKTI GATC 1 cut(s) 435
BstMBI GATC 1 cut(s) 432
BstNSI RCATGY 1 cut(s) 72
BstSFI CTRYAG 1 cut(s) 318
BstUI CGCG 1 cut(s) 42
BsuRI GGCC 1 cut(s) 142
BtgZI GCGATG 1 cut(s) 57
BtsCI GGATG 2 cut(s) 355, 385
Cac8I GCNNGC 1 cut(s) 269
Csp6I GTAC 1 cut(s) 180
CviAII CATG 2 cut(s) 69, 298
CviJI RGCY 7 cut(s) 25, 127, 142, 156, 267, 274, 428
CviKI_1 RGCY 7 cut(s) 25, 127, 142, 156, 267, 274, 428
CviQI GTAC 1 cut(s) 180
DdeI CTNAG 3 cut(s) 26, 358, 388
DpnI GATC 1 cut(s) 434
DpnII GATC 1 cut(s) 432
Eco88I CYCGRG 1 cut(s) 188
FaeI CATG 2 cut(s) 72, 301
FaiI YATR 6 cut(s) 70, 92, 299, 335, 345, 416
FatI CATG 2 cut(s) 68, 297
Fnu4HI GCNGC 1 cut(s) 272
FokI GGATG 2 cut(s) 362, 392
Fsp4HI GCNGC 1 cut(s) 272
FspBI CTAG 1 cut(s) 227
GluI GCNGC 1 cut(s) 272
HaeIII GGCC 1 cut(s) 142
Hin1II CATG 2 cut(s) 72, 301
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HindIII AAGCTT 2 cut(s) 125, 265
HinfI GANTC 4 cut(s) 173, 191, 284, 386
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 4 cut(s) 134, 361, 391, 432
Hpy188III TCNNGA 2 cut(s) 96, 188
Hpy8I GTNNAC 1 cut(s) 292
HpyCH4III ACNGT 1 cut(s) 322
HpyCH4V TGCA 1 cut(s) 106
HpyF3I CTNAG 3 cut(s) 26, 358, 388
Hsp92II CATG 2 cut(s) 72, 301
Kzo9I GATC 1 cut(s) 432
LpnPI CCDG 1 cut(s) 92
MaeI CTAG 1 cut(s) 227
MaeIII GTNAC 3 cut(s) 192, 212, 329
MalI GATC 1 cut(s) 434
MboI GATC 1 cut(s) 432
MboII GAAGA 3 cut(s) 245, 255, 303
MluCI AATT 3 cut(s) 165, 258, 325
MlyI GAGTC 2 cut(s) 200, 380
MseI TTAA 4 cut(s) 222, 261, 324, 423
MvnI CGCG 1 cut(s) 42
NdeII GATC 1 cut(s) 432
NlaIII CATG 2 cut(s) 72, 301
NmuCI GTSAC 2 cut(s) 192, 329
NspI RCATGY 1 cut(s) 72
PaeR7I CTCGAG 1 cut(s) 188
PciI ACATGT 1 cut(s) 68
PfeI GAWTC 2 cut(s) 173, 284
PkrI GCNGC 1 cut(s) 273
PleI GAGTC 2 cut(s) 199, 380
PpsI GAGTC 2 cut(s) 199, 380
PscI ACATGT 1 cut(s) 68
PsiI TTATAA 1 cut(s) 345
RsaI GTAC 1 cut(s) 181
RsaNI GTAC 1 cut(s) 180
SaqAI TTAA 4 cut(s) 222, 261, 324, 423
SatI GCNGC 1 cut(s) 272
Sau3AI GATC 1 cut(s) 432
SchI GAGTC 2 cut(s) 200, 380
SetI ASST 4 cut(s) 123, 129, 269, 343
SfcI CTRYAG 1 cut(s) 318
Sfr274I CTCGAG 1 cut(s) 188
SlaI CTCGAG 1 cut(s) 188
SmlI CTYRAG 5 cut(s) 19, 49, 122, 157, 188
SmoI CTYRAG 5 cut(s) 19, 49, 122, 157, 188
Sse9I AATT 3 cut(s) 165, 258, 325
SsiI CCGC 1 cut(s) 271
SspMI CTAG 1 cut(s) 227
TaaI ACNGT 1 cut(s) 322
TaqI TCGA 2 cut(s) 189, 435
TasI AATT 3 cut(s) 165, 258, 325
TatI WGTACW 1 cut(s) 179
TauI GCSGC 1 cut(s) 274
TfiI GAWTC 2 cut(s) 173, 284
Tru1I TTAA 4 cut(s) 222, 261, 324, 423
Tru9I TTAA 4 cut(s) 222, 261, 324, 423
TseFI GTSAC 2 cut(s) 192, 329
Tsp45I GTSAC 2 cut(s) 192, 329
TspGWI ACGGA 1 cut(s) 277
XceI RCATGY 1 cut(s) 72
XhoI CTCGAG 1 cut(s) 188
XspI CTAG 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.