RLG00000027288
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000305
Physical Location & Seq
Reverse (-)
10329699 .. 10333224
3526 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027288

Sequence Viewer

Length: 1206 bp
ATGGGTTCCTGCTTTAGTTCCAGGATCAAAGCTGATAGCCCACTTCATAATGGGAATTCTAATAGCAAGGTGTCATCCGTCTCAGTGCCTTCAACTCCTCGAACAGAGGGTGAGATCTTGATGTCTTCCAACTTGAAGAACTTCTTTTTTAATGAACTGAAAACAGCCACAAGGAACTTTCGTCCTGACAGTATGGTGGGTGAAGGCGGTTTTGGTAGTGTTTTTAAGGGCTGGGTTGATGAGAATGCATTAACAGCTGCCAAGCCTGGTACTGGAATGGTTATTGCTGTGAAGAGGCTTAACCAAGAAGGTCTCCAGGGTCACAAGGAATGGTTGACAGAAATCAACTATCTTGGACAGCTCCGACACCCAAATCTTGTGAAGCTGATTGGTTATTGCTTGGAGGATGACCACCGGCTTCTGGTGTATGAATTCATGCCTCGTGGCAGCTTGGACAATCATCTATTTAGAAGGGCTTCTTACTTTCAACCACTTTCATGGTCCCTTCGTATGAAGATTGCCCTTGGTGCTGCTAAGGGTCTAGCATTTCTTCACAGTGATGAGGCAAAAGTGATCTATCGGGACTTTAAAACTTCTAATATCCTGTTGGATTCAGCCTACAATGCCAAACTCTCTGATTTTGGTTTAGCCAAGGATGGACCAGCAGGTGATAGAAGCCACGTCTCAACAAGGGTCATGGGGACATATGGGTATGCGGCTCCCGAGTATATGGCCACAGGTCATTTAACCGCCAAAAGTGATGTGTATAGTTTTGGGGTTGTTATGCTCGAAATGTTGTCTGGAAGACGAGCTGTGGACAAGAACCGGCCTACAGGGGAACACAGCTTAGTTGAGTGGGCCAAACCTTACCTTGCCAGCAAACGCAAAGTTCTCCAAGTTTTTGATGCTCGTATTGATGGCCAGTACTCTGTGGCTTCAGCTCTTAAAGCAGTTAACCTTGCAATTCGATGCTTATCAACAGAACCCAAGTTTAGGCCAATCATGAATGATGTGGTAAAAGCATTAGAGCAGCTTCAGGAACCTGAAGACATGGAGGGTCCGGGACCCTCCCAAAATGAAGCTCGCCAAAATCTTCATGCCAGTTCAAGTAATGGTCCCCAAAATCGAAGGAGAAGTATGAACGGAACCAGCAATGCAAGAAATGCTTCTCTTCACAGGCCATCTGCTGCACGCGGAAATACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0035821 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0075136 GO:0080134 GO:0098542 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

402

Amino Acids

44.26

Weight (kDa)

9.51

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 63 - 340 1.6e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 64 - 342 9.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 656
Acc36I ACCTGC 1 cut(s) 656
AccII CGCG 1 cut(s) 1194
AciI CCGC 4 cut(s) 207, 716, 750, 1194
AclWI GGATC 1 cut(s) 32
AcoI YGGCCR 2 cut(s) 732, 919
AcsI RAATTY 2 cut(s) 55, 431
AcuI CTGAAG 3 cut(s) 921, 1019, 1065
AfaI GTAC 2 cut(s) 271, 926
AfiI CCNNNNNNNGG 3 cut(s) 272, 421, 993
AgsI TTSAA 4 cut(s) 93, 136, 488, 1107
AjiI CACGTC 1 cut(s) 682
AjnI CCWGG 3 cut(s) 20, 265, 315
AjuI GAANNNNNNNTTGG 2 cut(s) 195, 227
Alw26I GTCTC 3 cut(s) 85, 317, 688
AlwI GGATC 1 cut(s) 32
Ama87I CYCGRG 1 cut(s) 722
AoxI GGCC 6 cut(s) 732, 827, 858, 919, 995, 1178
ApeKI GCWGC 5 cut(s) 257, 447, 530, 1030, 1187
ApoI RAATTY 2 cut(s) 55, 431
Asp700I GAANNNNTTC 3 cut(s) 140, 475, 1165
AspS9I GGNCC 6 cut(s) 501, 659, 858, 1058, 1064, 1115
AsuC2I CCSGG 1 cut(s) 1062
AsuHPI GGTGA 3 cut(s) 122, 212, 680
AvaI CYCGRG 1 cut(s) 722
AvaII GGWCC 5 cut(s) 501, 659, 1058, 1064, 1115
BalI TGGCCA 2 cut(s) 734, 921
BauI CACGAG 1 cut(s) 441
BbsI GAAGAC 3 cut(s) 117, 811, 1053
BbvI GCAGC 5 cut(s) 244, 459, 517, 1042, 1174
BccI CCATC 3 cut(s) 650, 911, 1189
BciT130I CCWGG 3 cut(s) 22, 267, 317
BcnI CCSGG 1 cut(s) 1062
BcoDI GTCTC 3 cut(s) 85, 317, 688
BfaI CTAG 1 cut(s) 542
BfmI CTRYAG 1 cut(s) 831
BfuAI ACCTGC 1 cut(s) 656
BglII AGATCT 1 cut(s) 114
BisI GCNGC 6 cut(s) 258, 448, 531, 717, 1031, 1188
BlsI GCNGC 6 cut(s) 259, 449, 532, 718, 1032, 1189
BmcAI AGTACT 1 cut(s) 926
Bme1390I CCNGG 4 cut(s) 22, 267, 317, 1062
Bme18I GGWCC 5 cut(s) 501, 659, 1058, 1064, 1115
BmeT110I CYCGRG 1 cut(s) 722
BmgBI CACGTC 1 cut(s) 682
BmgT120I GGNCC 6 cut(s) 501, 659, 858, 1058, 1064, 1115
BmiI GGNNCC 9 cut(s) 7, 503, 720, 1041, 1059, 1065, 1066, 1117, 1147
BmrFI CCNGG 4 cut(s) 22, 267, 317, 1062
BmsI GCATC 2 cut(s) 895, 959
BpiI GAAGAC 3 cut(s) 117, 811, 1053
BpmI CTGGAG 1 cut(s) 299
Bpu10I CCTNAGC 1 cut(s) 534
BpuMI CCSGG 1 cut(s) 1062
BsaBI GATNNNNATC 1 cut(s) 973
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 3 cut(s) 316, 523, 651
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 421, 993
Bse118I RCCGGY 2 cut(s) 414, 825
Bse1I ACTGG 3 cut(s) 277, 922, 1101
Bse3DI GCAATG 1 cut(s) 1159
Bse8I GATNNNNATC 1 cut(s) 973
BseBI CCWGG 3 cut(s) 22, 267, 317
BseDI CCNNGG 3 cut(s) 316, 523, 651
BseGI GGATG 3 cut(s) 74, 412, 661
BseJI GATNNNNATC 1 cut(s) 973
BseLI CCNNNNNNNGG 3 cut(s) 272, 421, 993
BseMI GCAATG 1 cut(s) 1159
BseMII CTCAG 1 cut(s) 96
BseNI ACTGG 3 cut(s) 277, 922, 1101
BseRI GAGGAG 1 cut(s) 87
BseXI GCAGC 5 cut(s) 244, 459, 517, 1042, 1174
BseYI CCCAGC 1 cut(s) 231
BsgI GTGCAG 1 cut(s) 1173
Bsh1236I CGCG 1 cut(s) 1194
BshFI GGCC 6 cut(s) 734, 829, 860, 921, 997, 1180
BsiHKCI CYCGRG 1 cut(s) 722
BsiSI CCGG 3 cut(s) 415, 826, 1061
BslFI GGGAC 5 cut(s) 487, 596, 715, 1077, 1101
BslI CCNNNNNNNGG 3 cut(s) 272, 421, 993
BsmAI GTCTC 3 cut(s) 85, 317, 688
BsmBI CGTCTC 2 cut(s) 85, 688
BsmFI GGGAC 5 cut(s) 487, 596, 715, 1077, 1101
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 6 cut(s) 734, 829, 860, 921, 997, 1180
Bso31I GGTCTC 1 cut(s) 317
BsoBI CYCGRG 1 cut(s) 722
Bsp143I GATC 3 cut(s) 24, 114, 573
BspACI CCGC 4 cut(s) 207, 716, 750, 1194
BspANI GGCC 6 cut(s) 734, 829, 860, 921, 997, 1180
BspCNI CTCAG 1 cut(s) 95
BspFNI CGCG 1 cut(s) 1194
BspHI TCATGA 1 cut(s) 1002
BspLI GGNNCC 9 cut(s) 7, 503, 720, 1041, 1059, 1065, 1066, 1117, 1147
BspMI ACCTGC 1 cut(s) 656
BspPI GGATC 1 cut(s) 32
BspTNI GGTCTC 1 cut(s) 317
BsrDI GCAATG 1 cut(s) 1159
BsrFI RCCGGY 2 cut(s) 414, 825
BsrI ACTGG 3 cut(s) 277, 922, 1101
BssAI RCCGGY 2 cut(s) 414, 825
BssECI CCNNGG 3 cut(s) 316, 523, 651
BssMI GATC 3 cut(s) 24, 114, 573
BssSI CACGAG 1 cut(s) 441
BssT1I CCWWGG 2 cut(s) 523, 651
Bst2BI CACGAG 1 cut(s) 441
Bst2UI CCWGG 3 cut(s) 22, 267, 317
Bst4CI ACNGT 2 cut(s) 191, 557
Bst6I CTCTTC 2 cut(s) 287, 1176
BstAPI GCANNNNNTGC 1 cut(s) 1163
BstC8I GCNNGC 3 cut(s) 877, 1084, 1192
BstDEI CTNAG 3 cut(s) 82, 534, 847
BstF5I GGATG 3 cut(s) 74, 412, 661
BstFNI CGCG 1 cut(s) 1194
BstKTI GATC 3 cut(s) 27, 117, 576
BstMAI GTCTC 3 cut(s) 85, 317, 688
BstMBI GATC 3 cut(s) 24, 114, 573
BstMWI GCNNNNNNNGC 5 cut(s) 254, 527, 623, 947, 1163
BstNI CCWGG 3 cut(s) 22, 267, 317
BstSCI CCNGG 4 cut(s) 20, 265, 315, 1060
BstSFI CTRYAG 1 cut(s) 831
BstUI CGCG 1 cut(s) 1194
BstV1I GCAGC 5 cut(s) 244, 459, 517, 1042, 1174
BstV2I GAAGAC 3 cut(s) 117, 811, 1053
BstX2I RGATCY 1 cut(s) 114
BstXI CCANNNNNNTGG 1 cut(s) 498
BstYI RGATCY 1 cut(s) 114
BsuRI GGCC 6 cut(s) 734, 829, 860, 921, 997, 1180
BtrI CACGTC 1 cut(s) 682
BtsCI GGATG 3 cut(s) 74, 412, 661
BtsIMutI CAGTG 2 cut(s) 90, 562
BveI ACCTGC 1 cut(s) 656
Cac8I GCNNGC 3 cut(s) 877, 1084, 1192
CciI TCATGA 1 cut(s) 1002
Cfr10I RCCGGY 2 cut(s) 414, 825
Cfr13I GGNCC 6 cut(s) 501, 659, 858, 1058, 1064, 1115
Csp6I GTAC 2 cut(s) 270, 925
CviAII CATG 6 cut(s) 436, 498, 697, 1003, 1051, 1097
CviQI GTAC 2 cut(s) 270, 925
DdeI CTNAG 3 cut(s) 82, 534, 847
DpnI GATC 3 cut(s) 26, 116, 575
DpnII GATC 3 cut(s) 24, 114, 573
DraI TTTAAA 1 cut(s) 589
EaeI YGGCCR 2 cut(s) 732, 919
Eam1104I CTCTTC 2 cut(s) 287, 1176
EarI CTCTTC 2 cut(s) 287, 1176
Eco130I CCWWGG 2 cut(s) 523, 651
Eco31I GGTCTC 1 cut(s) 317
Eco47I GGWCC 5 cut(s) 501, 659, 1058, 1064, 1115
Eco57I CTGAAG 3 cut(s) 921, 1019, 1065
Eco88I CYCGRG 1 cut(s) 722
EcoO109I RGGNCCY 1 cut(s) 1064
EcoRI GAATTC 2 cut(s) 55, 431
EcoRII CCWGG 3 cut(s) 20, 265, 315
EcoT14I CCWWGG 2 cut(s) 523, 651
EcoT22I ATGCAT 1 cut(s) 250
ErhI CCWWGG 2 cut(s) 523, 651
Esp3I CGTCTC 2 cut(s) 85, 688
FaeI CATG 6 cut(s) 439, 501, 700, 1006, 1054, 1100
FalI AAGNNNNNCTT 6 cut(s) 128, 160, 463, 495, 1150, 1182
FaqI GGGAC 5 cut(s) 487, 596, 715, 1077, 1101
FatI CATG 6 cut(s) 435, 497, 696, 1002, 1050, 1096
FauNDI CATATG 1 cut(s) 706
Fnu4HI GCNGC 6 cut(s) 258, 448, 531, 717, 1031, 1188
FokI GGATG 3 cut(s) 61, 419, 668
Fsp4HI GCNGC 6 cut(s) 258, 448, 531, 717, 1031, 1188
FspBI CTAG 1 cut(s) 542
GluI GCNGC 6 cut(s) 258, 448, 531, 717, 1031, 1188
GsaI CCCAGC 1 cut(s) 235
GsuI CTGGAG 1 cut(s) 299
HaeIII GGCC 6 cut(s) 734, 829, 860, 921, 997, 1180
HapII CCGG 3 cut(s) 415, 826, 1061
Hin1II CATG 6 cut(s) 439, 501, 700, 1006, 1054, 1100
HincII GTYRAC 2 cut(s) 336, 955
HindII GTYRAC 2 cut(s) 336, 955
HinfI GANTC 1 cut(s) 611
HpaI GTTAAC 1 cut(s) 955
HpaII CCGG 3 cut(s) 415, 826, 1061
HphI GGTGA 3 cut(s) 122, 212, 680
Hpy166II GTNNAC 3 cut(s) 336, 817, 955
Hpy188I TCNGA 2 cut(s) 365, 637
Hpy188III TCNNGA 7 cut(s) 118, 185, 581, 722, 801, 1003, 1037
Hpy8I GTNNAC 3 cut(s) 336, 817, 955
HpyAV CCTTC 6 cut(s) 99, 197, 302, 465, 515, 1122
HpyCH4III ACNGT 2 cut(s) 191, 557
HpyCH4IV ACGT 1 cut(s) 681
HpyCH4V TGCA 4 cut(s) 248, 962, 1157, 1190
HpyF10VI GCNNNNNNNGC 5 cut(s) 254, 527, 623, 947, 1163
HpyF3I CTNAG 3 cut(s) 82, 534, 847
HpySE526I ACGT 1 cut(s) 681
Hsp92II CATG 6 cut(s) 439, 501, 700, 1006, 1054, 1100
KflI GGGWCCC 1 cut(s) 1064
KspAI GTTAAC 1 cut(s) 955
Kzo9I GATC 3 cut(s) 24, 114, 573
LmnI GCTCC 2 cut(s) 366, 724
Lsp1109I GCAGC 5 cut(s) 244, 459, 517, 1042, 1174
LweI GCATC 2 cut(s) 895, 959
MaeI CTAG 1 cut(s) 542
MaeII ACGT 1 cut(s) 681
MaeIII GTNAC 1 cut(s) 320
MalI GATC 3 cut(s) 26, 116, 575
MboI GATC 3 cut(s) 24, 114, 573
MboII GAAGA 9 cut(s) 117, 148, 304, 526, 542, 816, 1058, 1085, 1163
MflI RGATCY 1 cut(s) 114
MlsI TGGCCA 2 cut(s) 734, 921
MluCI AATT 3 cut(s) 55, 431, 963
MluNI TGGCCA 2 cut(s) 734, 921
MmeI TCCRAC 3 cut(s) 153, 388, 588
MnlI CCTC 8 cut(s) 100, 108, 288, 397, 450, 556, 1048, 1078
Mox20I TGGCCA 2 cut(s) 734, 921
Mph1103I ATGCAT 1 cut(s) 250
MroXI GAANNNNTTC 3 cut(s) 140, 475, 1165
MscI TGGCCA 2 cut(s) 734, 921
MseI TTAA 8 cut(s) 150, 225, 251, 300, 588, 746, 945, 954
MslI CAYNNNNRTG 2 cut(s) 496, 558
Msp20I TGGCCA 2 cut(s) 734, 921
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 3 cut(s) 415, 826, 1061
MspR9I CCNGG 4 cut(s) 22, 267, 317, 1062
Mva1269I GAATGC 1 cut(s) 250
MvaI CCWGG 3 cut(s) 22, 267, 317
MvnI CGCG 1 cut(s) 1194
MwoI GCNNNNNNNGC 5 cut(s) 254, 527, 623, 947, 1163
NciI CCSGG 1 cut(s) 1062
NdeI CATATG 1 cut(s) 706
NdeII GATC 3 cut(s) 24, 114, 573
NlaIII CATG 6 cut(s) 439, 501, 700, 1006, 1054, 1100
NlaIV GGNNCC 9 cut(s) 7, 503, 720, 1041, 1059, 1065, 1066, 1117, 1147
NmuCI GTSAC 1 cut(s) 320
NsiI ATGCAT 1 cut(s) 250
PagI TCATGA 1 cut(s) 1002
PaqCI CACCTGC 1 cut(s) 656
PctI GAATGC 1 cut(s) 250
PdmI GAANNNNTTC 3 cut(s) 140, 475, 1165
PfeI GAWTC 1 cut(s) 611
PfoI TCCNGGA 2 cut(s) 20, 1060
PkrI GCNGC 6 cut(s) 259, 449, 532, 718, 1032, 1189
PpuMI RGGWCCY 1 cut(s) 1064
Psp5II RGGWCCY 1 cut(s) 1064
Psp6I CCWGG 3 cut(s) 20, 265, 315
PspFI CCCAGC 1 cut(s) 231
PspGI CCWGG 3 cut(s) 20, 265, 315
PspN4I GGNNCC 9 cut(s) 7, 503, 720, 1041, 1059, 1065, 1066, 1117, 1147
PspPI GGNCC 6 cut(s) 501, 659, 858, 1058, 1064, 1115
PspPPI RGGWCCY 1 cut(s) 1064
PsuI RGATCY 1 cut(s) 114
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 2 cut(s) 271, 926
RsaNI GTAC 2 cut(s) 270, 925
RseI CAYNNNNRTG 2 cut(s) 496, 558
SaqAI TTAA 8 cut(s) 150, 225, 251, 300, 588, 746, 945, 954
SatI GCNGC 6 cut(s) 258, 448, 531, 717, 1031, 1188
Sau3AI GATC 3 cut(s) 24, 114, 573
Sau96I GGNCC 6 cut(s) 501, 659, 858, 1058, 1064, 1115
ScaI AGTACT 1 cut(s) 926
ScrFI CCNGG 4 cut(s) 22, 267, 317, 1062
SfaNI GCATC 2 cut(s) 895, 959
SfcI CTRYAG 1 cut(s) 831
SinI GGWCC 5 cut(s) 501, 659, 1058, 1064, 1115
SmiMI CAYNNNNRTG 2 cut(s) 496, 558
Sse9I AATT 3 cut(s) 55, 431, 963
SsiI CCGC 4 cut(s) 207, 716, 750, 1194
SspMI CTAG 1 cut(s) 542
StyD4I CCNGG 4 cut(s) 20, 265, 315, 1060
StyI CCWWGG 2 cut(s) 523, 651
TaaI ACNGT 2 cut(s) 191, 557
TaiI ACGT 1 cut(s) 684
TaqI TCGA 4 cut(s) 100, 789, 967, 1126
TasI AATT 3 cut(s) 55, 431, 963
TatI WGTACW 1 cut(s) 924
TauI GCSGC 1 cut(s) 719
TfiI GAWTC 1 cut(s) 611
Tru1I TTAA 8 cut(s) 150, 225, 251, 300, 588, 746, 945, 954
Tru9I TTAA 8 cut(s) 150, 225, 251, 300, 588, 746, 945, 954
TscAI CASTG 2 cut(s) 90, 562
TseFI GTSAC 1 cut(s) 320
TseI GCWGC 5 cut(s) 257, 447, 530, 1030, 1187
Tsp45I GTSAC 1 cut(s) 320
TspGWI ACGGA 2 cut(s) 67, 1158
TspRI CASTG 2 cut(s) 90, 562
VpaK11BI GGWCC 5 cut(s) 501, 659, 1058, 1064, 1115
XapI RAATTY 2 cut(s) 55, 431
XmnI GAANNNNTTC 3 cut(s) 140, 475, 1165
XspI CTAG 1 cut(s) 542
ZrmI AGTACT 1 cut(s) 926
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.