RchiOBHm_Chr1g0367411
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000305
Physical Location & Seq
Forward (+)
57705497 .. 57709697
4201 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59187

Sequence Viewer

Length: 1500 bp
ATGATAAGGTTAAAAGTCCTCAGGAATTATCGACCCGGTAGCATTTCGCAACATCAAACAAAAGGTTCTGCTTTGCTGCTATACAAGGCTTCTTTGGCAGTTCAGGTTCTGCAGTTTCAAGTCATTTGGCTTTTTCCAGATATGGGTGGGGGAATTCGCACAAGCGTGAAGGGGTACCTCCTTTCGCAGCGGATCACTACGGCTTCAGATACAGTGCATGCAAACGAGAGCACCAATAGAAATTTCACTGCGCCCCAAGCTGCTGATTCAGAACAAGAGACAAGCACGGACTTGGATTCATCTAACTCATATTGGCTCAGTAGGTTTAGTGGTAGCATTCCTTGCTTGCCGATATTGGGCTCTGCTTCAAAGAGCAAGGTTTCAAACGGAACTAGAATCAGAGCTGAGAGTCTGCGTCACAGAGTGCCTTCAACTCCTCGGACAGAAGTTGAGATCTTGCTAAAGAGCTTCTTTTTTAATGAACTAAAAACCGCCACCAGGAACTTTCGGCCTGATAATGTGGTGGGTGAGGGTGGTTTTGGTACTGTCTTTAAGGGGTGGATTGATCAGAATTCATTTGCAGCTGCCAAGCCTGGTAAAGGAATGGCTGTTGCTATAAAGAGGCTTAACCAAGAAAGTTATCAGGGTCGGGAGGAATGGTTTAGAGAAATTTACTACCTTGGACAGCTGCGTCACCCAAATCTTGTGAAGTTGATAGGCTATTGTTCAGAGGATAACGAACTGCTTCTTGTGTATGAATTTGTGCCCCATGGCAGTTTGGAGAATCATATATTTAGAAGGAGTTCTCACTTTCAACCACTTTCATGGACTTTTCGTATGAAGATTGCCCTTGGTGCTGCGAAGGCTCTAGCATTTCTTCACAATGAAGCAAAAGTTATATATCGTGACTTTAAAGCAGCTAATATTCTGTTGGACTCAACCTACAATGTCAAGCTCTCTGATTTTGGTTTGGCCATGGATGGGCGATTAATTGACAGACACCCAGGTGCCAAAACAAGGGTCATTGGCACATATGGATGTGCAGCTCCCAAGTATATAGAAACAAGGGTCATGGGCACATATGGATATGCAGCTCCTGAGTATATAGCTACAGGTCGTCTAAACACCAAATGTGATGTGTATGGTTTTGGAGCTGTTATGCTCGAATTGTTGTCAGGAAGACGAGTTTTTGACCGAAGCCGGCTACCTGGGGAACAGAAATTAGTTAAATGGGCCAAACCTTACCTTGTCAGCAAACAGAGAGTCCTCCAAATTTTTGATTCTCATATTAAAGGCCAGTTTTCTGTAGCCAGAGCTCTTAAAGCAGTTGACCTTGCATTTCTTTGCCTATCAAGAGATCCCAAGCTTAGGCCAAACATGAATAATGTGGTAAAAACATTGGAGAAGCTTCAGGAATCCAGTGACATGGATGGCTTGGGGATCTCTCAAAATAAACGTCGCCAAAATCCACATGTCAGTTTAATCATTGGTCCCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0035821 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0075136 GO:0080134 GO:0098542 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

499

Amino Acids

56.02

Weight (kDa)

9.84

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 172 - 465 3.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 173 - 467 1.6e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 690
Acc65I GGTACC 1 cut(s) 174
AccB1I GGYRCC 2 cut(s) 174, 1007
AciI CCGC 2 cut(s) 190, 492
AclWI GGATC 3 cut(s) 200, 1352, 1448
AcoI YGGCCR 1 cut(s) 972
AcsI RAATTY 6 cut(s) 153, 241, 571, 669, 758, 1272
AcuI CTGAAG 2 cut(s) 189, 1394
AdeI CACNNNGTG 1 cut(s) 424
AfaI GTAC 2 cut(s) 176, 544
AfiI CCNNNNNNNGG 7 cut(s) 143, 356, 498, 599, 981, 1017, 1368
AflIII ACRYGT 1 cut(s) 1471
AgsI TTSAA 5 cut(s) 119, 369, 384, 432, 815
AjnI CCWGG 4 cut(s) 497, 592, 1003, 1207
AjuI GAANNNNNNNTTGG 2 cut(s) 227, 259
AleI CACNNNNGTG 2 cut(s) 164, 1005
Alw21I GWGCWC 2 cut(s) 233, 1318
Alw26I GTCTC 1 cut(s) 272
AlwI GGATC 3 cut(s) 200, 1352, 1448
AlwNI CAGNNNCTG 2 cut(s) 109, 1097
AoxI GGCC 5 cut(s) 509, 972, 1233, 1294, 1370
ApoI RAATTY 6 cut(s) 153, 241, 571, 669, 758, 1272
ArsI GACNNNNNNTTYG 6 cut(s) 1005, 1037, 1248, 1280, 1441, 1473
AseI ATTAAT 1 cut(s) 989
Asp700I GAANNNNTTC 2 cut(s) 744, 802
Asp718I GGTACC 1 cut(s) 174
AspLEI GCGC 1 cut(s) 253
AspS9I GGNCC 2 cut(s) 1233, 1490
AsuC2I CCSGG 1 cut(s) 36
AsuHPI GGTGA 2 cut(s) 539, 686
AvaII GGWCC 1 cut(s) 1490
AxyI CCTNAGG 1 cut(s) 20
BaeGI GKGCMC 2 cut(s) 768, 1079
BalI TGGCCA 1 cut(s) 974
BanI GGYRCC 2 cut(s) 174, 1007
BanII GRGCYC 2 cut(s) 362, 1318
BbsI GAAGAC 1 cut(s) 1186
Bbv12I GWGCWC 2 cut(s) 233, 1318
BccI CCATC 2 cut(s) 974, 1424
BceAI ACGGC 1 cut(s) 216
BciT130I CCWGG 4 cut(s) 499, 594, 1005, 1209
BclI TGATCA 1 cut(s) 565
BcnI CCSGG 1 cut(s) 36
BcoDI GTCTC 1 cut(s) 272
BfaI CTAG 2 cut(s) 393, 869
BfmI CTRYAG 3 cut(s) 110, 1110, 1305
BglII AGATCT 1 cut(s) 453
Bme1390I CCNGG 5 cut(s) 36, 499, 594, 1005, 1209
Bme18I GGWCC 1 cut(s) 1490
BmgT120I GGNCC 2 cut(s) 1233, 1490
BmiI GGNNCC 3 cut(s) 176, 1009, 1492
BmrFI CCNGG 5 cut(s) 36, 499, 594, 1005, 1209
BpiI GAAGAC 1 cut(s) 1186
Bpu10I CCTNAGC 1 cut(s) 1367
BpuMI CCSGG 1 cut(s) 36
BsaJI CCNNGG 7 cut(s) 437, 679, 769, 850, 975, 1003, 1208
BsaXI ACNNNNNCTCC 2 cut(s) 644, 674
Bsc4I CCNNNNNNNGG 7 cut(s) 143, 356, 498, 599, 981, 1017, 1368
Bse118I RCCGGY 1 cut(s) 1200
Bse1I ACTGG 2 cut(s) 1297, 1419
Bse21I CCTNAGG 1 cut(s) 20
BseBI CCWGG 4 cut(s) 499, 594, 1005, 1209
BseDI CCNNGG 7 cut(s) 437, 679, 769, 850, 975, 1003, 1208
BseGI GGATG 3 cut(s) 985, 1043, 1435
BseLI CCNNNNNNNGG 7 cut(s) 143, 356, 498, 599, 981, 1017, 1368
BseMII CTCAG 4 cut(s) 34, 331, 396, 1089
BseNI ACTGG 2 cut(s) 1297, 1419
BseRI GAGGAG 1 cut(s) 426
BseSI GKGCMC 2 cut(s) 768, 1079
BsgI GTGCAG 1 cut(s) 1062
BshFI GGCC 5 cut(s) 511, 974, 1235, 1296, 1372
BshNI GGYRCC 2 cut(s) 174, 1007
BsiHKAI GWGCWC 2 cut(s) 233, 1318
BsiSI CCGG 2 cut(s) 36, 1201
BslFI GGGAC 1 cut(s) 1476
BslI CCNNNNNNNGG 7 cut(s) 143, 356, 498, 599, 981, 1017, 1368
BsmAI GTCTC 1 cut(s) 272
BsmFI GGGAC 1 cut(s) 1476
BsmI GAATGC 1 cut(s) 336
BsnI GGCC 5 cut(s) 511, 974, 1235, 1296, 1372
Bsp1286I GDGCHC 5 cut(s) 233, 362, 768, 1079, 1318
Bsp143I GATC 5 cut(s) 192, 453, 565, 1357, 1440
Bsp19I CCATGG 2 cut(s) 769, 975
BspACI CCGC 2 cut(s) 190, 492
BspANI GGCC 5 cut(s) 511, 974, 1235, 1296, 1372
BspCNI CTCAG 4 cut(s) 33, 330, 397, 1090
BspLI GGNNCC 3 cut(s) 176, 1009, 1492
BspMAI CTGCAG 1 cut(s) 114
BspPI GGATC 3 cut(s) 200, 1352, 1448
BspT107I GGYRCC 2 cut(s) 174, 1007
BsrFI RCCGGY 1 cut(s) 1200
BsrI ACTGG 2 cut(s) 1297, 1419
BssAI RCCGGY 1 cut(s) 1200
BssECI CCNNGG 7 cut(s) 437, 679, 769, 850, 975, 1003, 1208
BssMI GATC 5 cut(s) 192, 453, 565, 1357, 1440
BssT1I CCWWGG 4 cut(s) 679, 769, 850, 975
Bst2UI CCWGG 4 cut(s) 499, 594, 1005, 1209
Bst4CI ACNGT 2 cut(s) 214, 547
BstAPI GCANNNNNTGC 1 cut(s) 342
BstC8I GCNNGC 3 cut(s) 219, 347, 1202
BstDEI CTNAG 5 cut(s) 20, 317, 405, 1098, 1367
BstDSI CCRYGG 2 cut(s) 769, 975
BstENI CCTNNNNNAGG 1 cut(s) 597
BstF5I GGATG 3 cut(s) 985, 1043, 1435
BstHHI GCGC 1 cut(s) 253
BstKTI GATC 5 cut(s) 195, 456, 568, 1360, 1443
BstMAI GTCTC 1 cut(s) 272
BstMBI GATC 5 cut(s) 192, 453, 565, 1357, 1440
BstMWI GCNNNNNNNGC 6 cut(s) 95, 257, 342, 854, 863, 1322
BstNI CCWGG 4 cut(s) 499, 594, 1005, 1209
BstNSI RCATGY 2 cut(s) 221, 1475
BstSCI CCNGG 5 cut(s) 34, 497, 592, 1003, 1207
BstSFI CTRYAG 3 cut(s) 110, 1110, 1305
BstSLI GKGCMC 2 cut(s) 768, 1079
BstV2I GAAGAC 1 cut(s) 1186
BstX2I RGATCY 3 cut(s) 453, 1357, 1440
BstXI CCANNNNNNTGG 2 cut(s) 825, 1426
BstYI RGATCY 3 cut(s) 453, 1357, 1440
Bsu36I CCTNAGG 1 cut(s) 20
BsuRI GGCC 5 cut(s) 511, 974, 1235, 1296, 1372
BtgI CCRYGG 2 cut(s) 769, 975
BtsCI GGATG 3 cut(s) 985, 1043, 1435
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 3 cut(s) 219, 246, 1426
Cac8I GCNNGC 3 cut(s) 219, 347, 1202
CaiI CAGNNNCTG 2 cut(s) 109, 1097
CfoI GCGC 1 cut(s) 253
Cfr10I RCCGGY 1 cut(s) 1200
Cfr13I GGNCC 2 cut(s) 1233, 1490
CseI GACGC 2 cut(s) 404, 680
Csp6I GTAC 2 cut(s) 175, 543
CviAII CATG 8 cut(s) 218, 770, 825, 976, 1072, 1378, 1426, 1472
CviQI GTAC 2 cut(s) 175, 543
DdeI CTNAG 5 cut(s) 20, 317, 405, 1098, 1367
DpnI GATC 5 cut(s) 194, 455, 567, 1359, 1442
DpnII GATC 5 cut(s) 192, 453, 565, 1357, 1440
DraI TTTAAA 1 cut(s) 913
DraIII CACNNNGTG 1 cut(s) 424
DrdI GACNNNNNNGTC 1 cut(s) 690
DseDI GACNNNNNNGTC 1 cut(s) 690
EaeI YGGCCR 1 cut(s) 972
Ecl136II GAGCTC 1 cut(s) 1316
Eco130I CCWWGG 4 cut(s) 679, 769, 850, 975
Eco24I GRGCYC 2 cut(s) 362, 1318
Eco47I GGWCC 1 cut(s) 1490
Eco53kI GAGCTC 1 cut(s) 1316
Eco57I CTGAAG 2 cut(s) 189, 1394
Eco81I CCTNAGG 1 cut(s) 20
EcoICRI GAGCTC 1 cut(s) 1316
EcoNI CCTNNNNNAGG 1 cut(s) 597
EcoRI GAATTC 2 cut(s) 153, 571
EcoRII CCWGG 4 cut(s) 497, 592, 1003, 1207
EcoT14I CCWWGG 4 cut(s) 679, 769, 850, 975
EcoT38I GRGCYC 2 cut(s) 362, 1318
ErhI CCWWGG 4 cut(s) 679, 769, 850, 975
FaeI CATG 8 cut(s) 221, 773, 828, 979, 1075, 1381, 1429, 1475
FalI AAGNNNNNCTT 2 cut(s) 455, 487
FaqI GGGAC 1 cut(s) 1476
FatI CATG 8 cut(s) 217, 769, 824, 975, 1071, 1377, 1425, 1471
FauNDI CATATG 2 cut(s) 1033, 1081
FbaI TGATCA 1 cut(s) 565
FokI GGATG 3 cut(s) 992, 1050, 1442
FriOI GRGCYC 2 cut(s) 362, 1318
FspBI CTAG 2 cut(s) 393, 869
GlaI GCGC 1 cut(s) 252
HaeIII GGCC 5 cut(s) 511, 974, 1235, 1296, 1372
HapII CCGG 2 cut(s) 36, 1201
HgaI GACGC 2 cut(s) 404, 680
HhaI GCGC 1 cut(s) 253
Hin1II CATG 8 cut(s) 221, 773, 828, 979, 1075, 1381, 1429, 1475
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HincII GTYRAC 1 cut(s) 1330
HindII GTYRAC 1 cut(s) 1330
HindIII AAGCTT 2 cut(s) 1364, 1406
HinfI GANTC 9 cut(s) 266, 296, 396, 409, 784, 935, 1263, 1280, 1415
HpaII CCGG 2 cut(s) 36, 1201
HphI GGTGA 2 cut(s) 539, 686
Hpy166II GTNNAC 1 cut(s) 1330
Hpy188I TCNGA 7 cut(s) 208, 271, 401, 441, 570, 730, 961
Hpy188III TCNNGA 8 cut(s) 22, 137, 650, 905, 1097, 1176, 1353, 1412
Hpy8I GTNNAC 1 cut(s) 1330
Hpy99I CGWCG 1 cut(s) 1461
HpyAV CCTTC 4 cut(s) 163, 438, 792, 856
HpyCH4III ACNGT 2 cut(s) 214, 547
HpyCH4IV ACGT 1 cut(s) 1456
HpyCH4V TGCA 7 cut(s) 112, 217, 221, 581, 1043, 1091, 1337
HpyF10VI GCNNNNNNNGC 6 cut(s) 95, 257, 342, 854, 863, 1322
HpyF3I CTNAG 5 cut(s) 20, 317, 405, 1098, 1367
HpySE526I ACGT 1 cut(s) 1456
Hsp92II CATG 8 cut(s) 221, 773, 828, 979, 1075, 1381, 1429, 1475
HspAI GCGC 1 cut(s) 251
KpnI GGTACC 1 cut(s) 178
KroI GCCGGC 1 cut(s) 1200
KroNI GCCGGC 1 cut(s) 1202
Ksp22I TGATCA 1 cut(s) 565
Kzo9I GATC 5 cut(s) 192, 453, 565, 1357, 1440
LmnI GCTCC 3 cut(s) 1051, 1099, 1151
MaeI CTAG 2 cut(s) 393, 869
MaeII ACGT 1 cut(s) 1456
MaeIII GTNAC 4 cut(s) 416, 692, 905, 1421
MalI GATC 5 cut(s) 194, 455, 567, 1359, 1442
MboI GATC 5 cut(s) 192, 453, 565, 1357, 1440
MboII GAAGA 3 cut(s) 853, 869, 1191
MflI RGATCY 3 cut(s) 453, 1357, 1440
MhlI GDGCHC 5 cut(s) 233, 362, 768, 1079, 1318
MlsI TGGCCA 1 cut(s) 974
MluNI TGGCCA 1 cut(s) 974
MlyI GAGTC 3 cut(s) 418, 929, 1272
MmeI TCCRAC 1 cut(s) 912
MnlI CCTC 8 cut(s) 29, 188, 447, 523, 615, 646, 724, 1277
Mox20I TGGCCA 1 cut(s) 974
MroNI GCCGGC 1 cut(s) 1200
MroXI GAANNNNTTC 2 cut(s) 744, 802
MscI TGGCCA 1 cut(s) 974
MslI CAYNNNNRTG 4 cut(s) 164, 823, 1005, 1036
Msp20I TGGCCA 1 cut(s) 974
MspA1I CMGCKG 3 cut(s) 190, 584, 688
MspI CCGG 2 cut(s) 36, 1201
MspR9I CCNGG 5 cut(s) 36, 499, 594, 1005, 1209
Mva1269I GAATGC 1 cut(s) 336
MvaI CCWGG 4 cut(s) 499, 594, 1005, 1209
MwoI GCNNNNNNNGC 6 cut(s) 95, 257, 342, 854, 863, 1322
NaeI GCCGGC 1 cut(s) 1202
NciI CCSGG 1 cut(s) 36
NcoI CCATGG 2 cut(s) 769, 975
NdeI CATATG 2 cut(s) 1033, 1081
NdeII GATC 5 cut(s) 192, 453, 565, 1357, 1440
NgoMIV GCCGGC 1 cut(s) 1200
NlaIII CATG 8 cut(s) 221, 773, 828, 979, 1075, 1381, 1429, 1475
NlaIV GGNNCC 3 cut(s) 176, 1009, 1492
NmuCI GTSAC 4 cut(s) 416, 692, 905, 1421
NspI RCATGY 2 cut(s) 221, 1475
OliI CACNNNNGTG 2 cut(s) 164, 1005
PaeI GCATGC 1 cut(s) 221
PciI ACATGT 1 cut(s) 1471
PctI GAATGC 1 cut(s) 336
PdiI GCCGGC 1 cut(s) 1202
PdmI GAANNNNTTC 2 cut(s) 744, 802
PfeI GAWTC 6 cut(s) 266, 296, 396, 784, 1280, 1415
PleI GAGTC 3 cut(s) 417, 929, 1271
PpsI GAGTC 3 cut(s) 417, 929, 1271
PscI ACATGT 1 cut(s) 1471
PshBI ATTAAT 1 cut(s) 989
Psp124BI GAGCTC 1 cut(s) 1318
Psp6I CCWGG 4 cut(s) 497, 592, 1003, 1207
PspGI CCWGG 4 cut(s) 497, 592, 1003, 1207
PspN4I GGNNCC 3 cut(s) 176, 1009, 1492
PspPI GGNCC 2 cut(s) 1233, 1490
PstI CTGCAG 1 cut(s) 114
PstNI CAGNNNCTG 2 cut(s) 109, 1097
PsuI RGATCY 3 cut(s) 453, 1357, 1440
PvuII CAGCTG 2 cut(s) 584, 688
RsaI GTAC 2 cut(s) 176, 544
RsaNI GTAC 2 cut(s) 175, 543
RseI CAYNNNNRTG 4 cut(s) 164, 823, 1005, 1036
SacI GAGCTC 1 cut(s) 1318
Sau3AI GATC 5 cut(s) 192, 453, 565, 1357, 1440
Sau96I GGNCC 2 cut(s) 1233, 1490
SchI GAGTC 3 cut(s) 418, 929, 1272
ScrFI CCNGG 5 cut(s) 36, 499, 594, 1005, 1209
SduI GDGCHC 5 cut(s) 233, 362, 768, 1079, 1318
SfcI CTRYAG 3 cut(s) 110, 1110, 1305
SinI GGWCC 1 cut(s) 1490
SmiMI CAYNNNNRTG 4 cut(s) 164, 823, 1005, 1036
SphI GCATGC 1 cut(s) 221
SsiI CCGC 2 cut(s) 190, 492
SspI AATATT 1 cut(s) 925
SspMI CTAG 2 cut(s) 393, 869
SstI GAGCTC 1 cut(s) 1318
StyD4I CCNGG 5 cut(s) 34, 497, 592, 1003, 1207
StyI CCWWGG 4 cut(s) 679, 769, 850, 975
TaaI ACNGT 2 cut(s) 214, 547
TaiI ACGT 1 cut(s) 1459
TaqI TCGA 2 cut(s) 31, 1164
TaqII GACCGA 1 cut(s) 1209
TfiI GAWTC 6 cut(s) 266, 296, 396, 784, 1280, 1415
TscAI CASTG 3 cut(s) 219, 253, 1426
TseFI GTSAC 4 cut(s) 416, 692, 905, 1421
Tsp45I GTSAC 4 cut(s) 416, 692, 905, 1421
TspDTI ATGAA 8 cut(s) 288, 495, 564, 771, 813, 854, 900, 1394
TspGWI ACGGA 2 cut(s) 302, 402
TspRI CASTG 3 cut(s) 219, 253, 1426
VpaK11BI GGWCC 1 cut(s) 1490
VspI ATTAAT 1 cut(s) 989
XagI CCTNNNNNAGG 1 cut(s) 597
XapI RAATTY 6 cut(s) 153, 241, 571, 669, 758, 1272
XceI RCATGY 2 cut(s) 221, 1475
XmnI GAANNNNTTC 2 cut(s) 744, 802
XspI CTAG 2 cut(s) 393, 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.