Rroxscaffold_4G00289490
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000305
Physical Location & Seq
Reverse (-)
10097644 .. 10101898
4255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00289490.1

Sequence Viewer

Length: 1311 bp
ATGGGTGGAGGAATTCGCACAAGCGTGAAGGGGTACCTCCTTTCGCAGCGGATCACTACGGCTTCAGACACAGTGCATGCAAACGAGAGCACCAATAGAATTTTCACTGCGCCCCAAGCTACTGATTCAGAACAAGAGACGAGCACGGACTTGGATTCATCTAACTCATATTGGCTCAGTAGGTTTAGTGGTAGCATTCCTTGCTTGCCGATATTGAGCTCTGCTTCAAAGAGCAGGGTTTCAAATAGAACTAGAATCAGAGCTGAGAGTCTGCCTCACAAAGTGCCTTCAACTCCTCGGACAGAGGTTGAGATCTTGCTAAACAGCTTCTTTTTTAATGAACTGAGAAACGCCACCAGGAACTTTCGGCCTGATAATGTGGTGGGTGAGGGTGGTTTTGGTACTGTCTTTAAGGGGTGGATTGATCAGAATTCATTAGCTGCTGCCAAGCCTGGTGAAGGAATGGCTGTTGCTATAAAGAGGCTTAACCAAGAAAGTTATCAGGGTCGGGAGGAATGGTTTAGAGAAATTTACTACCTTGGACAGCTGTGTCACCCAAATCTTGTGAAGTTGATAGGCTATTGTTCAGAGGATAACGAACTGCTTCTGGTGTATGAATTTGTGCCCCGTGGTAGTTTGGAGAATCATATATTTAGAAGGGCTTCTTACTTTCAACCACTTTCATGGTCCCTTCGTATGAAGATTGCCCTTGGTGCTGCGAAGGCTCTAGCGTTTCTTCACAATGAAGCAAAAGTTATATACCGTGACTTTAAAACATCTAATATCCTGTTGGATTCAACCTACAATGTCAAGCTCTCTGATTTTGGTTTGGCCGTGGATGCACGAGCATTTGACAGACACCGAGGTGCCAAAACAACAATCATGGGCACATACGGATATTCAGCTCCTGAGTATCTAGCTACAGGTCGTTTGACCACCAAATGTGATGTGTATGGTTTTGGAGTTGTTATGCTTGAATTGCTTTCCGGAAAACGAGTTTTTGACCGGAACCGGCCACCTGGGGAACAGAACTTAGTTGAATGGGCCAAACCTTACCTTGTCAGCAAACACAGAGTCCTCCAAATTTTTGATCATCATATCAAAGGCCAGTTTTCTGTGACCAGAGCTCTTAAAGCAGTTGACCTTGCATTTCTTTGCCTATCAAGAGATCCCAAGCTTAGGCCAAACATGAATAATGTGGTAAAAACATTGGAGAAGCTTCAGGCATCCAGTGACATGGACGGCTTGGGGATCTTTCAAAATCAATGTCGCCAAAATCCACATGTCAGTTCAATCAATGGTCCCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0035821 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0075136 GO:0080134 GO:0098542 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

436

Amino Acids

48.96

Weight (kDa)

9.4

Isoelectric Point (pI)

30.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 125 - 402 4.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 126 - 404 4.9e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 549
Acc65I GGTACC 1 cut(s) 33
AccB1I GGYRCC 2 cut(s) 33, 866
AccIII TCCGGA 1 cut(s) 986
AciI CCGC 1 cut(s) 49
AclWI GGATC 3 cut(s) 59, 1163, 1259
AcoI YGGCCR 2 cut(s) 831, 1013
AcsI RAATTY 6 cut(s) 12, 99, 430, 528, 617, 1083
AcuI CTGAAG 2 cut(s) 48, 1205
AdeI CACNNNGTG 1 cut(s) 283
AfaI GTAC 2 cut(s) 35, 403
AfiI CCNNNNNNNGG 2 cut(s) 458, 1179
AflIII ACRYGT 1 cut(s) 1282
AgsI TTSAA 9 cut(s) 228, 243, 291, 674, 798, 977, 1040, 1259, 1293
AjnI CCWGG 3 cut(s) 356, 451, 1018
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
AleI CACNNNNGTG 2 cut(s) 23, 864
Alw21I GWGCWC 4 cut(s) 92, 146, 221, 1129
Alw26I GTCTC 1 cut(s) 131
AlwI GGATC 3 cut(s) 59, 1163, 1259
AlwNI CAGNNNCTG 1 cut(s) 908
Aor13HI TCCGGA 1 cut(s) 986
AoxI GGCC 6 cut(s) 368, 831, 1013, 1044, 1105, 1181
ApeKI GCWGC 4 cut(s) 46, 440, 443, 716
ApoI RAATTY 6 cut(s) 12, 99, 430, 528, 617, 1083
ArsI GACNNNNNNTTYG 4 cut(s) 1059, 1091, 1252, 1284
Asp700I GAANNNNTTC 2 cut(s) 603, 661
Asp718I GGTACC 1 cut(s) 33
AspLEI GCGC 1 cut(s) 112
AspS9I GGNCC 3 cut(s) 687, 1044, 1301
AsuHPI GGTGA 3 cut(s) 398, 467, 545
AvaII GGWCC 2 cut(s) 687, 1301
BaeGI GKGCMC 2 cut(s) 627, 890
BanI GGYRCC 2 cut(s) 33, 866
BanII GRGCYC 2 cut(s) 221, 1129
BauI CACGAG 1 cut(s) 843
Bbv12I GWGCWC 4 cut(s) 92, 146, 221, 1129
BbvI GCAGC 4 cut(s) 58, 427, 430, 703
BceAI ACGGC 3 cut(s) 75, 818, 1258
BciT130I CCWGG 3 cut(s) 358, 453, 1020
BclI TGATCA 2 cut(s) 424, 1090
BcoDI GTCTC 1 cut(s) 131
BfaI CTAG 3 cut(s) 252, 728, 917
BfmI CTRYAG 1 cut(s) 921
BglII AGATCT 1 cut(s) 312
BisI GCNGC 4 cut(s) 47, 441, 444, 717
BlsI GCNGC 4 cut(s) 48, 442, 445, 718
Bme1390I CCNGG 3 cut(s) 358, 453, 1020
Bme18I GGWCC 2 cut(s) 687, 1301
BmgT120I GGNCC 3 cut(s) 687, 1044, 1301
BmiI GGNNCC 5 cut(s) 35, 689, 868, 1010, 1303
BmrFI CCNGG 3 cut(s) 358, 453, 1020
BmsI GCATC 2 cut(s) 829, 1235
BplI GAGNNNNNCTC 2 cut(s) 259, 291
Bpu10I CCTNAGC 1 cut(s) 1178
BsaJI CCNNGG 7 cut(s) 296, 538, 628, 709, 834, 862, 1019
BsaWI WCCGGW 2 cut(s) 986, 1005
BsaXI ACNNNNNCTCC 2 cut(s) 503, 533
Bsc4I CCNNNNNNNGG 2 cut(s) 458, 1179
Bse118I RCCGGY 1 cut(s) 1011
Bse1I ACTGG 2 cut(s) 1108, 1230
BseAI TCCGGA 1 cut(s) 986
BseBI CCWGG 3 cut(s) 358, 453, 1020
BseDI CCNNGG 7 cut(s) 296, 538, 628, 709, 834, 862, 1019
BseGI GGATG 2 cut(s) 844, 1226
BseLI CCNNNNNNNGG 2 cut(s) 458, 1179
BseMII CTCAG 4 cut(s) 190, 255, 335, 900
BseNI ACTGG 2 cut(s) 1108, 1230
BseRI GAGGAG 1 cut(s) 285
BseSI GKGCMC 2 cut(s) 627, 890
BseXI GCAGC 4 cut(s) 58, 427, 430, 703
BshFI GGCC 6 cut(s) 370, 833, 1015, 1046, 1107, 1183
BshNI GGYRCC 2 cut(s) 33, 866
BsiHKAI GWGCWC 4 cut(s) 92, 146, 221, 1129
BsiSI CCGG 3 cut(s) 987, 1006, 1012
BslFI GGGAC 2 cut(s) 673, 1287
BslI CCNNNNNNNGG 2 cut(s) 458, 1179
BsmAI GTCTC 1 cut(s) 131
BsmBI CGTCTC 1 cut(s) 131
BsmFI GGGAC 2 cut(s) 673, 1287
BsmI GAATGC 1 cut(s) 195
BsnI GGCC 6 cut(s) 370, 833, 1015, 1046, 1107, 1183
Bsp1286I GDGCHC 6 cut(s) 92, 146, 221, 627, 890, 1129
Bsp13I TCCGGA 1 cut(s) 986
Bsp143I GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
BspACI CCGC 1 cut(s) 49
BspANI GGCC 6 cut(s) 370, 833, 1015, 1046, 1107, 1183
BspCNI CTCAG 4 cut(s) 189, 256, 336, 901
BspEI TCCGGA 1 cut(s) 986
BspLI GGNNCC 5 cut(s) 35, 689, 868, 1010, 1303
BspPI GGATC 3 cut(s) 59, 1163, 1259
BspT107I GGYRCC 2 cut(s) 33, 866
BsrFI RCCGGY 1 cut(s) 1011
BsrI ACTGG 2 cut(s) 1108, 1230
BssAI RCCGGY 1 cut(s) 1011
BssECI CCNNGG 7 cut(s) 296, 538, 628, 709, 834, 862, 1019
BssMI GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
BssSI CACGAG 1 cut(s) 843
BssT1I CCWWGG 2 cut(s) 538, 709
Bst2BI CACGAG 1 cut(s) 843
Bst2UI CCWGG 3 cut(s) 358, 453, 1020
Bst4CI ACNGT 3 cut(s) 73, 406, 764
BstAPI GCANNNNNTGC 1 cut(s) 201
BstC8I GCNNGC 2 cut(s) 78, 206
BstDEI CTNAG 6 cut(s) 176, 264, 344, 909, 1033, 1178
BstDSI CCRYGG 2 cut(s) 628, 834
BstENI CCTNNNNNAGG 1 cut(s) 456
BstF5I GGATG 2 cut(s) 844, 1226
BstHHI GCGC 1 cut(s) 112
BstKTI GATC 6 cut(s) 54, 315, 427, 1093, 1171, 1254
BstMAI GTCTC 1 cut(s) 131
BstMBI GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
BstMWI GCNNNNNNNGC 7 cut(s) 116, 201, 713, 722, 839, 979, 1133
BstNI CCWGG 3 cut(s) 358, 453, 1020
BstNSI RCATGY 2 cut(s) 80, 1286
BstSCI CCNGG 3 cut(s) 356, 451, 1018
BstSFI CTRYAG 1 cut(s) 921
BstSLI GKGCMC 2 cut(s) 627, 890
BstV1I GCAGC 4 cut(s) 58, 427, 430, 703
BstX2I RGATCY 3 cut(s) 312, 1168, 1251
BstXI CCANNNNNNTGG 2 cut(s) 684, 1237
BstYI RGATCY 3 cut(s) 312, 1168, 1251
BsuRI GGCC 6 cut(s) 370, 833, 1015, 1046, 1107, 1183
BtgI CCRYGG 2 cut(s) 628, 834
BtsCI GGATG 2 cut(s) 844, 1226
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 3 cut(s) 78, 105, 1237
Cac8I GCNNGC 2 cut(s) 78, 206
CaiI CAGNNNCTG 1 cut(s) 908
CfoI GCGC 1 cut(s) 112
Cfr10I RCCGGY 1 cut(s) 1011
Cfr13I GGNCC 3 cut(s) 687, 1044, 1301
Csp6I GTAC 2 cut(s) 34, 402
CviAII CATG 6 cut(s) 77, 684, 883, 1189, 1237, 1283
CviQI GTAC 2 cut(s) 34, 402
DdeI CTNAG 6 cut(s) 176, 264, 344, 909, 1033, 1178
DpnI GATC 6 cut(s) 53, 314, 426, 1092, 1170, 1253
DpnII GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
DraI TTTAAA 1 cut(s) 772
DraIII CACNNNGTG 1 cut(s) 283
DrdI GACNNNNNNGTC 1 cut(s) 549
DseDI GACNNNNNNGTC 1 cut(s) 549
EaeI YGGCCR 2 cut(s) 831, 1013
Ecl136II GAGCTC 2 cut(s) 219, 1127
Eco130I CCWWGG 2 cut(s) 538, 709
Eco24I GRGCYC 2 cut(s) 221, 1129
Eco47I GGWCC 2 cut(s) 687, 1301
Eco53kI GAGCTC 2 cut(s) 219, 1127
Eco57I CTGAAG 2 cut(s) 48, 1205
EcoICRI GAGCTC 2 cut(s) 219, 1127
EcoNI CCTNNNNNAGG 1 cut(s) 456
EcoRI GAATTC 2 cut(s) 12, 430
EcoRII CCWGG 3 cut(s) 356, 451, 1018
EcoT14I CCWWGG 2 cut(s) 538, 709
EcoT38I GRGCYC 2 cut(s) 221, 1129
ErhI CCWWGG 2 cut(s) 538, 709
Esp3I CGTCTC 1 cut(s) 131
FaeI CATG 6 cut(s) 80, 687, 886, 1192, 1240, 1286
FalI AAGNNNNNCTT 2 cut(s) 649, 681
FaqI GGGAC 2 cut(s) 673, 1287
FatI CATG 6 cut(s) 76, 683, 882, 1188, 1236, 1282
FbaI TGATCA 2 cut(s) 424, 1090
Fnu4HI GCNGC 4 cut(s) 47, 441, 444, 717
FokI GGATG 2 cut(s) 851, 1213
FriOI GRGCYC 2 cut(s) 221, 1129
Fsp4HI GCNGC 4 cut(s) 47, 441, 444, 717
FspBI CTAG 3 cut(s) 252, 728, 917
GlaI GCGC 1 cut(s) 111
GluI GCNGC 4 cut(s) 47, 441, 444, 717
HaeIII GGCC 6 cut(s) 370, 833, 1015, 1046, 1107, 1183
HapII CCGG 3 cut(s) 987, 1006, 1012
HhaI GCGC 1 cut(s) 112
Hin1II CATG 6 cut(s) 80, 687, 886, 1192, 1240, 1286
Hin6I GCGC 1 cut(s) 110
HinP1I GCGC 1 cut(s) 110
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HindIII AAGCTT 2 cut(s) 1175, 1217
HinfI GANTC 7 cut(s) 125, 155, 255, 268, 643, 794, 1074
HpaII CCGG 3 cut(s) 987, 1006, 1012
HphI GGTGA 3 cut(s) 398, 467, 545
Hpy166II GTNNAC 1 cut(s) 1141
Hpy188I TCNGA 7 cut(s) 67, 130, 260, 300, 429, 589, 820
Hpy188III TCNNGA 4 cut(s) 509, 908, 987, 1164
Hpy8I GTNNAC 1 cut(s) 1141
HpyAV CCTTC 6 cut(s) 22, 297, 452, 651, 701, 715
HpyCH4III ACNGT 3 cut(s) 73, 406, 764
HpyCH4V TGCA 4 cut(s) 76, 80, 842, 1148
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 201, 713, 722, 839, 979, 1133
HpyF3I CTNAG 6 cut(s) 176, 264, 344, 909, 1033, 1178
Hsp92II CATG 6 cut(s) 80, 687, 886, 1192, 1240, 1286
HspAI GCGC 1 cut(s) 110
Kpn2I TCCGGA 1 cut(s) 986
KpnI GGTACC 1 cut(s) 37
Ksp22I TGATCA 2 cut(s) 424, 1090
Kzo9I GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
LmnI GCTCC 1 cut(s) 910
Lsp1109I GCAGC 4 cut(s) 58, 427, 430, 703
LweI GCATC 2 cut(s) 829, 1235
MaeI CTAG 3 cut(s) 252, 728, 917
MaeIII GTNAC 4 cut(s) 551, 764, 1117, 1232
MalI GATC 6 cut(s) 53, 314, 426, 1092, 1170, 1253
MboI GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
MboII GAAGA 2 cut(s) 712, 728
MflI RGATCY 3 cut(s) 312, 1168, 1251
MhlI GDGCHC 6 cut(s) 92, 146, 221, 627, 890, 1129
MluCI AATT 7 cut(s) 12, 99, 430, 528, 617, 977, 1083
MlyI GAGTC 2 cut(s) 277, 1083
MmeI TCCRAC 1 cut(s) 771
MroI TCCGGA 1 cut(s) 986
MroXI GAANNNNTTC 2 cut(s) 603, 661
MseI TTAA 5 cut(s) 336, 411, 486, 771, 1131
MslI CAYNNNNRTG 3 cut(s) 23, 682, 864
MspA1I CMGCKG 2 cut(s) 49, 547
MspI CCGG 3 cut(s) 987, 1006, 1012
MspR9I CCNGG 3 cut(s) 358, 453, 1020
Mva1269I GAATGC 1 cut(s) 195
MvaI CCWGG 3 cut(s) 358, 453, 1020
MwoI GCNNNNNNNGC 7 cut(s) 116, 201, 713, 722, 839, 979, 1133
NdeII GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
NlaIII CATG 6 cut(s) 80, 687, 886, 1192, 1240, 1286
NlaIV GGNNCC 5 cut(s) 35, 689, 868, 1010, 1303
NmuCI GTSAC 4 cut(s) 551, 764, 1117, 1232
NspI RCATGY 2 cut(s) 80, 1286
OliI CACNNNNGTG 2 cut(s) 23, 864
PaeI GCATGC 1 cut(s) 80
PciI ACATGT 1 cut(s) 1282
PctI GAATGC 1 cut(s) 195
PdmI GAANNNNTTC 2 cut(s) 603, 661
PfeI GAWTC 5 cut(s) 125, 155, 255, 643, 794
PkrI GCNGC 4 cut(s) 48, 442, 445, 718
PleI GAGTC 2 cut(s) 276, 1082
PpsI GAGTC 2 cut(s) 276, 1082
PscI ACATGT 1 cut(s) 1282
Psp124BI GAGCTC 2 cut(s) 221, 1129
Psp6I CCWGG 3 cut(s) 356, 451, 1018
PspGI CCWGG 3 cut(s) 356, 451, 1018
PspN4I GGNNCC 5 cut(s) 35, 689, 868, 1010, 1303
PspPI GGNCC 3 cut(s) 687, 1044, 1301
PstNI CAGNNNCTG 1 cut(s) 908
PsuI RGATCY 3 cut(s) 312, 1168, 1251
PvuII CAGCTG 1 cut(s) 547
RsaI GTAC 2 cut(s) 35, 403
RsaNI GTAC 2 cut(s) 34, 402
RseI CAYNNNNRTG 3 cut(s) 23, 682, 864
SacI GAGCTC 2 cut(s) 221, 1129
SaqAI TTAA 5 cut(s) 336, 411, 486, 771, 1131
SatI GCNGC 4 cut(s) 47, 441, 444, 717
Sau3AI GATC 6 cut(s) 51, 312, 424, 1090, 1168, 1251
Sau96I GGNCC 3 cut(s) 687, 1044, 1301
SchI GAGTC 2 cut(s) 277, 1083
ScrFI CCNGG 3 cut(s) 358, 453, 1020
SduI GDGCHC 6 cut(s) 92, 146, 221, 627, 890, 1129
SfaNI GCATC 2 cut(s) 829, 1235
SfcI CTRYAG 1 cut(s) 921
SinI GGWCC 2 cut(s) 687, 1301
SmiMI CAYNNNNRTG 3 cut(s) 23, 682, 864
SphI GCATGC 1 cut(s) 80
Sse9I AATT 7 cut(s) 12, 99, 430, 528, 617, 977, 1083
SsiI CCGC 1 cut(s) 49
SspMI CTAG 3 cut(s) 252, 728, 917
SstI GAGCTC 2 cut(s) 221, 1129
StyD4I CCNGG 3 cut(s) 356, 451, 1018
StyI CCWWGG 2 cut(s) 538, 709
TaaI ACNGT 3 cut(s) 73, 406, 764
TasI AATT 7 cut(s) 12, 99, 430, 528, 617, 977, 1083
TfiI GAWTC 5 cut(s) 125, 155, 255, 643, 794
Tru1I TTAA 5 cut(s) 336, 411, 486, 771, 1131
Tru9I TTAA 5 cut(s) 336, 411, 486, 771, 1131
TscAI CASTG 3 cut(s) 78, 112, 1237
TseFI GTSAC 4 cut(s) 551, 764, 1117, 1232
TseI GCWGC 4 cut(s) 46, 440, 443, 716
Tsp45I GTSAC 4 cut(s) 551, 764, 1117, 1232
TspDTI ATGAA 8 cut(s) 147, 354, 423, 630, 672, 713, 759, 1205
TspGWI ACGGA 2 cut(s) 161, 909
TspRI CASTG 3 cut(s) 78, 112, 1237
VpaK11BI GGWCC 2 cut(s) 687, 1301
XagI CCTNNNNNAGG 1 cut(s) 456
XapI RAATTY 6 cut(s) 12, 99, 430, 528, 617, 1083
XceI RCATGY 2 cut(s) 80, 1286
XmnI GAANNNNTTC 2 cut(s) 603, 661
XspI CTAG 3 cut(s) 252, 728, 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.