RchiOBHm_Chr1g0367231
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000305
Physical Location & Seq
Forward (+)
57586807 .. 57591854
5048 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59171

Sequence Viewer

Length: 1332 bp
ATGAGTGGTGGGCTTCGGACAAGCGTGAAGGGGTACCTTATTGCACAACGGGTCACTGGGGCACTGGAAATAAACACAGTGCACGAGAATGAGAATGAGAATGAGACGAGCATAAATGTAGCTAGCAATTCCACAGCTGCTGACTCTGTGGATCATCCACCTCCGCTTCCAGTTCCAGAGACTTCAGCTTCATACGGGCTCAATATCTGTGATGGGAACATTCCTTGCTTTTCAATGTTGAGCTCTGCTGCAGAGTGTATGGCTTCTTATGGGACTACAACCGGTGCTGAGTGTCCTCCTCATGCTGTGCCTTCAACTCCTCGAACAGAGGGTGAAATCTTGCTGTTCCCCACCTTAAAGACCTTCTCCTTTAGTGAACTGAAAAGATCTACCAGGCAATTTCGTTTTGATAATATGTTGGGAGAAGGTAGTTTTGGTTGTGTCTTCAAGGGTTGGGTTAATGGGAATTCACTAACAGCTGCCAAGCCTGGTACTGGCATGGTCATTGCTGTGAAGAGGCTTAACCGACAAAGTCTTCTGGGTCACAAGGAATGGATGACAGAAATTAACTACCTTGGAAGGCTGCGTCATCCGAATCTTGTGAAATTGATTGGTTATTGCACTGAGGATGACGACGGCCTTTTGGTGTACGAATTTATGCCTTGTGGAAGCTTGAATAATCATCTATTTAGAAGGGGTTCTTACTCTCAATCACTGTCATGGACGCTTCGTATGAAGATTGCCTTTGGTGCTGCTAAGGTGCTAGCATTTCTTCACAGTGGTGAGGTAAAAGTGATCCATCGGAACATAAAAAGTTCGAAGATCCTGCTGGATTCAACCTACAATGCGAAACTCTGTAGTTTTTGTCTGGCCAAGGATGGGCCAGAAGGTGATAGAAGTCATATCTCAACTAGGGTCATGGGGACATCTGGACATGCAGCTCCTGAATATGTGGCCACAGGTCATTTGACTGCCAAATGTGATGTATATGCGTTTGGAGTTGTTATGCTCGAAATGTTGTCTGGAAAACGAGCTATGGACAAGAACTCGCCAACTGGGGAATCCAATTTGGTTGAGTGGAGTCAATGGACCAATTCTGACATTGTCAGCAAACACAAAGTTCTCCAAATTATCGATGCTCGTGTTGAAGGACAGTACTCTGTTGCTACAGCTCTTAAAGCAGCTGACCTTGCATTTCGCTGCCTATCAACAGATCCCAAGCTTAGGCCAAACATGAATGATGTGGTAAAAGTTTTGGAGGAGCTTCAGGAATCTGGTGACATGTCTCATAACGAACCTCGCCACAATCCTCATGCCAGTTCAAGTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0035821 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0075136 GO:0080134 GO:0098542 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

443

Amino Acids

48.38

Weight (kDa)

6.94

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 135 - 419 4.1e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 136 - 417 2.4e-39 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 33
AccB1I GGYRCC 1 cut(s) 33
AciI CCGC 1 cut(s) 164
AclWI GGATC 4 cut(s) 159, 790, 817, 1208
AcoI YGGCCR 2 cut(s) 870, 954
AcsI RAATTY 2 cut(s) 466, 653
AcuI CTGAAG 2 cut(s) 168, 1250
AfaI GTAC 4 cut(s) 35, 493, 650, 1157
AfiI CCNNNNNNNGG 3 cut(s) 494, 879, 1224
AflIII ACRYGT 1 cut(s) 1281
AgeI ACCGGT 1 cut(s) 281
AgsI TTSAA 7 cut(s) 234, 315, 448, 676, 837, 1148, 1323
AjnI CCWGG 2 cut(s) 392, 487
AjuI GAANNNNNNNTTGG 2 cut(s) 417, 449
AleI CACNNNNGTG 1 cut(s) 780
Alw21I GWGCWC 2 cut(s) 84, 245
Alw26I GTCTC 3 cut(s) 98, 173, 1290
Alw44I GTGCAC 1 cut(s) 80
AlwI GGATC 4 cut(s) 159, 790, 817, 1208
AlwNI CAGNNNCTG 2 cut(s) 140, 944
AoxI GGCC 5 cut(s) 637, 870, 881, 954, 1226
ApaLI GTGCAC 1 cut(s) 80
ApeKI GCWGC 8 cut(s) 137, 248, 479, 583, 752, 938, 1181, 1200
ApoI RAATTY 2 cut(s) 466, 653
AsiGI ACCGGT 1 cut(s) 281
Asp700I GAANNNNTTC 1 cut(s) 697
Asp718I GGTACC 1 cut(s) 33
AspS9I GGNCC 2 cut(s) 881, 1089
AsuHPI GGTGA 4 cut(s) 344, 794, 902, 1289
AsuII TTCGAA 1 cut(s) 818
AsuNHI GCTAGC 2 cut(s) 122, 763
AvaII GGWCC 1 cut(s) 1089
BaeGI GKGCMC 2 cut(s) 64, 84
BalI TGGCCA 2 cut(s) 872, 956
BanI GGYRCC 1 cut(s) 33
BanII GRGCYC 2 cut(s) 201, 245
BauI CACGAG 2 cut(s) 83, 1140
BbsI GAAGAC 2 cut(s) 436, 527
Bbv12I GWGCWC 2 cut(s) 84, 245
BbvI GCAGC 8 cut(s) 124, 235, 466, 570, 739, 950, 1187, 1193
BccI CCATC 3 cut(s) 206, 807, 872
BceAI ACGGC 1 cut(s) 652
BcgI CGANNNNNNTGC 2 cut(s) 808, 842
BciT130I CCWGG 2 cut(s) 394, 489
BcoDI GTCTC 3 cut(s) 98, 173, 1290
BfaI CTAG 3 cut(s) 123, 764, 912
BfmI CTRYAG 3 cut(s) 249, 856, 1167
BglII AGATCT 1 cut(s) 386
BisI GCNGC 8 cut(s) 138, 249, 480, 584, 753, 939, 1182, 1201
BlsI GCNGC 8 cut(s) 139, 250, 481, 585, 754, 940, 1183, 1202
BmcAI AGTACT 1 cut(s) 1157
Bme1390I CCNGG 2 cut(s) 394, 489
Bme18I GGWCC 1 cut(s) 1089
BmgT120I GGNCC 2 cut(s) 881, 1089
BmiI GGNNCC 1 cut(s) 35
BmrFI CCNGG 2 cut(s) 394, 489
BmrI ACTGGG 2 cut(s) 66, 1065
BmsI GCATC 1 cut(s) 1126
BmtI GCTAGC 2 cut(s) 126, 767
BmuI ACTGGG 2 cut(s) 66, 1065
BpiI GAAGAC 2 cut(s) 436, 527
Bpu10I CCTNAGC 2 cut(s) 756, 1223
Bpu14I TTCGAA 1 cut(s) 818
Bsa29I ATCGAT 1 cut(s) 1134
BsaJI CCNNGG 2 cut(s) 574, 873
BsaWI WCCGGW 1 cut(s) 281
Bsc4I CCNNNNNNNGG 3 cut(s) 494, 879, 1224
Bse118I RCCGGY 1 cut(s) 281
Bse1I ACTGG 6 cut(s) 61, 69, 170, 499, 1060, 1317
Bse3DI GCAATG 1 cut(s) 504
BseBI CCWGG 2 cut(s) 394, 489
BseCI ATCGAT 1 cut(s) 1134
BseDI CCNNGG 2 cut(s) 574, 873
BseGI GGATG 5 cut(s) 154, 561, 589, 634, 883
BseLI CCNNNNNNNGG 3 cut(s) 494, 879, 1224
BseMI GCAATG 1 cut(s) 504
BseMII CTCAG 2 cut(s) 279, 615
BseNI ACTGG 6 cut(s) 61, 69, 170, 499, 1060, 1317
BseRI GAGGAG 3 cut(s) 288, 309, 1274
BseSI GKGCMC 2 cut(s) 64, 84
BseXI GCAGC 8 cut(s) 124, 235, 466, 570, 739, 950, 1187, 1193
BshFI GGCC 5 cut(s) 639, 872, 883, 956, 1228
BshNI GGYRCC 1 cut(s) 33
BshTI ACCGGT 1 cut(s) 281
BshVI ATCGAT 1 cut(s) 1134
BsiHKAI GWGCWC 2 cut(s) 84, 245
BsiSI CCGG 1 cut(s) 282
BslFI GGGAC 2 cut(s) 286, 937
BslI CCNNNNNNNGG 3 cut(s) 494, 879, 1224
BsmAI GTCTC 3 cut(s) 98, 173, 1290
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 2 cut(s) 286, 937
BsnI GGCC 5 cut(s) 639, 872, 883, 956, 1228
Bsp119I TTCGAA 1 cut(s) 818
Bsp1286I GDGCHC 4 cut(s) 64, 84, 201, 245
Bsp143I GATC 5 cut(s) 151, 386, 795, 822, 1213
BspACI CCGC 1 cut(s) 164
BspANI GGCC 5 cut(s) 639, 872, 883, 956, 1228
BspCNI CTCAG 2 cut(s) 280, 616
BspDI ATCGAT 1 cut(s) 1134
BspLI GGNNCC 1 cut(s) 35
BspMAI CTGCAG 1 cut(s) 253
BspOI GCTAGC 2 cut(s) 126, 767
BspPI GGATC 4 cut(s) 159, 790, 817, 1208
BspT104I TTCGAA 1 cut(s) 818
BspT107I GGYRCC 1 cut(s) 33
BsrDI GCAATG 1 cut(s) 504
BsrFI RCCGGY 1 cut(s) 281
BsrI ACTGG 6 cut(s) 61, 69, 170, 499, 1060, 1317
BssAI RCCGGY 1 cut(s) 281
BssECI CCNNGG 2 cut(s) 574, 873
BssMI GATC 5 cut(s) 151, 386, 795, 822, 1213
BssSI CACGAG 2 cut(s) 83, 1140
BssT1I CCWWGG 2 cut(s) 574, 873
Bst2BI CACGAG 2 cut(s) 83, 1140
Bst2UI CCWGG 2 cut(s) 394, 489
Bst4CI ACNGT 4 cut(s) 79, 717, 779, 1155
Bst6I CTCTTC 1 cut(s) 509
BstBI TTCGAA 1 cut(s) 818
BstC8I GCNNGC 2 cut(s) 124, 765
BstDEI CTNAG 4 cut(s) 288, 624, 756, 1223
BstF5I GGATG 5 cut(s) 154, 561, 589, 634, 883
BstKTI GATC 5 cut(s) 154, 389, 798, 825, 1216
BstMAI GTCTC 3 cut(s) 98, 173, 1290
BstMBI GATC 5 cut(s) 151, 386, 795, 822, 1213
BstMWI GCNNNNNNNGC 3 cut(s) 749, 1178, 1190
BstNI CCWGG 2 cut(s) 394, 489
BstNSI RCATGY 2 cut(s) 938, 1285
BstSCI CCNGG 2 cut(s) 392, 487
BstSFI CTRYAG 3 cut(s) 249, 856, 1167
BstSLI GKGCMC 2 cut(s) 64, 84
BstV1I GCAGC 8 cut(s) 124, 235, 466, 570, 739, 950, 1187, 1193
BstV2I GAAGAC 2 cut(s) 436, 527
BstX2I RGATCY 3 cut(s) 386, 822, 1213
BstYI RGATCY 3 cut(s) 386, 822, 1213
Bsu15I ATCGAT 1 cut(s) 1134
BsuRI GGCC 5 cut(s) 639, 872, 883, 956, 1228
BsuTUI ATCGAT 1 cut(s) 1134
BtsCI GGATG 5 cut(s) 154, 561, 589, 634, 883
BtsIMutI CAGTG 6 cut(s) 54, 62, 84, 621, 713, 784
Cac8I GCNNGC 2 cut(s) 124, 765
CaiI CAGNNNCTG 2 cut(s) 140, 944
Cfr10I RCCGGY 1 cut(s) 281
Cfr13I GGNCC 2 cut(s) 881, 1089
ClaI ATCGAT 1 cut(s) 1134
CseI GACGC 2 cut(s) 575, 733
Csp6I GTAC 4 cut(s) 34, 492, 649, 1156
CspAI ACCGGT 1 cut(s) 281
CviAII CATG 8 cut(s) 302, 499, 720, 919, 935, 1234, 1282, 1313
CviQI GTAC 4 cut(s) 34, 492, 649, 1156
DdeI CTNAG 4 cut(s) 288, 624, 756, 1223
DpnI GATC 5 cut(s) 153, 388, 797, 824, 1215
DpnII GATC 5 cut(s) 151, 386, 795, 822, 1213
EaeI YGGCCR 2 cut(s) 870, 954
Eam1104I CTCTTC 1 cut(s) 509
EarI CTCTTC 1 cut(s) 509
Ecl136II GAGCTC 1 cut(s) 243
Eco130I CCWWGG 2 cut(s) 574, 873
Eco24I GRGCYC 2 cut(s) 201, 245
Eco47I GGWCC 1 cut(s) 1089
Eco53kI GAGCTC 1 cut(s) 243
Eco57I CTGAAG 2 cut(s) 168, 1250
EcoICRI GAGCTC 1 cut(s) 243
EcoRI GAATTC 1 cut(s) 466
EcoRII CCWGG 2 cut(s) 392, 487
EcoT14I CCWWGG 2 cut(s) 574, 873
EcoT38I GRGCYC 2 cut(s) 201, 245
ErhI CCWWGG 2 cut(s) 574, 873
Esp3I CGTCTC 1 cut(s) 98
FaeI CATG 8 cut(s) 305, 502, 723, 922, 938, 1237, 1285, 1316
FalI AAGNNNNNCTT 4 cut(s) 685, 717, 728, 760
FaqI GGGAC 2 cut(s) 286, 937
FatI CATG 8 cut(s) 301, 498, 719, 918, 934, 1233, 1281, 1312
Fnu4HI GCNGC 8 cut(s) 138, 249, 480, 584, 753, 939, 1182, 1201
FokI GGATG 5 cut(s) 141, 568, 576, 641, 890
FriOI GRGCYC 2 cut(s) 201, 245
Fsp4HI GCNGC 8 cut(s) 138, 249, 480, 584, 753, 939, 1182, 1201
FspBI CTAG 3 cut(s) 123, 764, 912
GluI GCNGC 8 cut(s) 138, 249, 480, 584, 753, 939, 1182, 1201
HaeIII GGCC 5 cut(s) 639, 872, 883, 956, 1228
HapII CCGG 1 cut(s) 282
HgaI GACGC 2 cut(s) 575, 733
Hin1II CATG 8 cut(s) 305, 502, 723, 922, 938, 1237, 1285, 1316
HindIII AAGCTT 2 cut(s) 670, 1220
HinfI GANTC 6 cut(s) 143, 595, 833, 1061, 1081, 1271
HpaII CCGG 1 cut(s) 282
HphI GGTGA 4 cut(s) 344, 794, 902, 1289
Hpy166II GTNNAC 3 cut(s) 82, 377, 649
Hpy188I TCNGA 4 cut(s) 18, 594, 804, 1099
Hpy188III TCNNGA 5 cut(s) 176, 930, 944, 1023, 1268
Hpy8I GTNNAC 3 cut(s) 82, 377, 649
Hpy99I CGWCG 1 cut(s) 638
HpyAV CCTTC 8 cut(s) 22, 321, 373, 419, 573, 687, 881, 1142
HpyCH4III ACNGT 4 cut(s) 79, 717, 779, 1155
HpyCH4V TGCA 6 cut(s) 44, 82, 251, 621, 938, 1193
HpyF10VI GCNNNNNNNGC 3 cut(s) 749, 1178, 1190
HpyF3I CTNAG 4 cut(s) 288, 624, 756, 1223
Hsp92II CATG 8 cut(s) 305, 502, 723, 922, 938, 1237, 1285, 1316
KpnI GGTACC 1 cut(s) 37
Kzo9I GATC 5 cut(s) 151, 386, 795, 822, 1213
LmnI GCTCC 2 cut(s) 946, 1261
Lsp1109I GCAGC 8 cut(s) 124, 235, 466, 570, 739, 950, 1187, 1193
LweI GCATC 1 cut(s) 1126
MaeI CTAG 3 cut(s) 123, 764, 912
MaeIII GTNAC 4 cut(s) 52, 542, 1277, 1325
MalI GATC 5 cut(s) 153, 388, 797, 824, 1215
MboI GATC 5 cut(s) 151, 386, 795, 822, 1213
MboII GAAGA 6 cut(s) 436, 526, 527, 748, 764, 832
MflI RGATCY 3 cut(s) 386, 822, 1213
MhlI GDGCHC 4 cut(s) 64, 84, 201, 245
MlsI TGGCCA 2 cut(s) 872, 956
MluCI AATT 9 cut(s) 127, 398, 466, 564, 605, 653, 1066, 1093, 1128
MluNI TGGCCA 2 cut(s) 872, 956
MlyI GAGTC 2 cut(s) 137, 1090
Mox20I TGGCCA 2 cut(s) 872, 956
MroXI GAANNNNTTC 1 cut(s) 697
MscI TGGCCA 2 cut(s) 872, 956
MseI TTAA 5 cut(s) 356, 459, 522, 567, 1176
MslI CAYNNNNRTG 4 cut(s) 87, 509, 718, 780
Msp20I TGGCCA 2 cut(s) 872, 956
MspA1I CMGCKG 3 cut(s) 137, 479, 1184
MspI CCGG 1 cut(s) 282
MspR9I CCNGG 2 cut(s) 394, 489
MvaI CCWGG 2 cut(s) 394, 489
MwoI GCNNNNNNNGC 3 cut(s) 749, 1178, 1190
NdeII GATC 5 cut(s) 151, 386, 795, 822, 1213
NheI GCTAGC 2 cut(s) 122, 763
NlaIII CATG 8 cut(s) 305, 502, 723, 922, 938, 1237, 1285, 1316
NlaIV GGNNCC 1 cut(s) 35
NmuCI GTSAC 3 cut(s) 52, 542, 1277
NspI RCATGY 2 cut(s) 938, 1285
NspV TTCGAA 1 cut(s) 818
OliI CACNNNNGTG 1 cut(s) 780
PciI ACATGT 1 cut(s) 1281
PdmI GAANNNNTTC 1 cut(s) 697
PfeI GAWTC 4 cut(s) 595, 833, 1061, 1271
PflFI GACNNNGTC 2 cut(s) 531, 1103
PinAI ACCGGT 1 cut(s) 281
PkrI GCNGC 8 cut(s) 139, 250, 481, 585, 754, 940, 1183, 1202
PleI GAGTC 2 cut(s) 137, 1089
PpsI GAGTC 2 cut(s) 137, 1089
PscI ACATGT 1 cut(s) 1281
Psp124BI GAGCTC 1 cut(s) 245
Psp6I CCWGG 2 cut(s) 392, 487
PspGI CCWGG 2 cut(s) 392, 487
PspN4I GGNNCC 1 cut(s) 35
PspPI GGNCC 2 cut(s) 881, 1089
PstI CTGCAG 1 cut(s) 253
PstNI CAGNNNCTG 2 cut(s) 140, 944
PsuI RGATCY 3 cut(s) 386, 822, 1213
PsyI GACNNNGTC 2 cut(s) 531, 1103
PvuII CAGCTG 3 cut(s) 137, 479, 1184
RsaI GTAC 4 cut(s) 35, 493, 650, 1157
RsaNI GTAC 4 cut(s) 34, 492, 649, 1156
RseI CAYNNNNRTG 4 cut(s) 87, 509, 718, 780
SacI GAGCTC 1 cut(s) 245
SaqAI TTAA 5 cut(s) 356, 459, 522, 567, 1176
SatI GCNGC 8 cut(s) 138, 249, 480, 584, 753, 939, 1182, 1201
Sau3AI GATC 5 cut(s) 151, 386, 795, 822, 1213
Sau96I GGNCC 2 cut(s) 881, 1089
ScaI AGTACT 1 cut(s) 1157
SchI GAGTC 2 cut(s) 137, 1090
ScrFI CCNGG 2 cut(s) 394, 489
SduI GDGCHC 4 cut(s) 64, 84, 201, 245
SfaNI GCATC 1 cut(s) 1126
SfcI CTRYAG 3 cut(s) 249, 856, 1167
SfuI TTCGAA 1 cut(s) 818
SinI GGWCC 1 cut(s) 1089
SmiMI CAYNNNNRTG 4 cut(s) 87, 509, 718, 780
Sse9I AATT 9 cut(s) 127, 398, 466, 564, 605, 653, 1066, 1093, 1128
SsiI CCGC 1 cut(s) 164
SspMI CTAG 3 cut(s) 123, 764, 912
SstI GAGCTC 1 cut(s) 245
StyD4I CCNGG 2 cut(s) 392, 487
StyI CCWWGG 2 cut(s) 574, 873
TaaI ACNGT 4 cut(s) 79, 717, 779, 1155
TaqI TCGA 4 cut(s) 322, 818, 1011, 1134
TasI AATT 9 cut(s) 127, 398, 466, 564, 605, 653, 1066, 1093, 1128
TatI WGTACW 1 cut(s) 1155
TfiI GAWTC 4 cut(s) 595, 833, 1061, 1271
Tru1I TTAA 5 cut(s) 356, 459, 522, 567, 1176
Tru9I TTAA 5 cut(s) 356, 459, 522, 567, 1176
TscAI CASTG 6 cut(s) 61, 69, 84, 628, 720, 784
TseFI GTSAC 3 cut(s) 52, 542, 1277
TseI GCWGC 8 cut(s) 137, 248, 479, 583, 752, 938, 1181, 1200
Tsp45I GTSAC 3 cut(s) 52, 542, 1277
TspDTI ATGAA 3 cut(s) 180, 749, 1250
TspRI CASTG 6 cut(s) 61, 69, 84, 628, 720, 784
Tth111I GACNNNGTC 2 cut(s) 531, 1103
VneI GTGCAC 1 cut(s) 80
VpaK11BI GGWCC 1 cut(s) 1089
XapI RAATTY 2 cut(s) 466, 653
XceI RCATGY 2 cut(s) 938, 1285
XmnI GAANNNNTTC 1 cut(s) 697
XspI CTAG 3 cut(s) 123, 764, 912
ZrmI AGTACT 1 cut(s) 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.