Rmu_sc0014291.1_g000001

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014291.1
OG0000305
Physical Location & Seq
Reverse (-)
1 .. 899
899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014291.1_g000001.1.cds

Sequence Viewer

Length: 424 bp
atgagtggtgggcttcgtacaagcgtgcaggggttccttaatgcaaaacgcctggctttgtctgcggaaacagatacagtgcatgagacgaatgagaccatcactcgcaatttcagtgcactccaacctgctgctgattctgtggataagaagaaagcacaagagaagagcattgcttcaacttcatatcgcctcagtatccatgatggattgaatgctaatagaaaaattgtcatcaattacagtgccttcatctcctcggaggctcggacacagaacgagatcttgccaagaagattcttctataatgaactgaaaacagcaacctggaactttcatcctgttaatatggtgggtaaaggttgttatggtcgtgtttttaaggggtggattgatgataatacatcagcatctgccaaacccg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

141

Amino Acids

15.69

Weight (kDa)

9.63

Isoelectric Point (pI)

26.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 136
AciI CCGC 1 cut(s) 65
AfaI GTAC 1 cut(s) 19
AgsI TTSAA 2 cut(s) 180, 214
AjnI CCWGG 2 cut(s) 51, 326
Alw21I GWGCWC 1 cut(s) 121
Alw26I GTCTC 2 cut(s) 80, 89
Alw44I GTGCAC 1 cut(s) 117
AlwNI CAGNNNCTG 1 cut(s) 413
ApaLI GTGCAC 1 cut(s) 117
ApeKI GCWGC 1 cut(s) 131
BaeGI GKGCMC 1 cut(s) 121
Bbv12I GWGCWC 1 cut(s) 121
BbvI GCAGC 1 cut(s) 118
BccI CCATC 2 cut(s) 107, 200
BciT130I CCWGG 2 cut(s) 53, 328
BciVI GTATCC 1 cut(s) 209
BcoDI GTCTC 2 cut(s) 80, 89
BfuAI ACCTGC 1 cut(s) 136
BfuI GTATCC 1 cut(s) 209
BglII AGATCT 1 cut(s) 282
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
Bme1390I CCNGG 2 cut(s) 53, 328
BmiI GGNNCC 1 cut(s) 35
BmrFI CCNGG 2 cut(s) 53, 328
BmsI GCATC 1 cut(s) 419
BsaI GGTCTC 1 cut(s) 89
BsaJI CCNNGG 1 cut(s) 258
Bse3DI GCAATG 1 cut(s) 171
BseBI CCWGG 2 cut(s) 53, 328
BseDI CCNNGG 1 cut(s) 258
BseGI GGATG 1 cut(s) 337
BseMI GCAATG 1 cut(s) 171
BseMII CTCAG 1 cut(s) 208
BseRI GAGGAG 1 cut(s) 247
BseSI GKGCMC 1 cut(s) 121
BseXI GCAGC 1 cut(s) 118
BsgI GTGCAG 1 cut(s) 47
BsiHKAI GWGCWC 1 cut(s) 121
BsmAI GTCTC 2 cut(s) 80, 89
BsmBI CGTCTC 1 cut(s) 80
BsmI GAATGC 1 cut(s) 220
Bso31I GGTCTC 1 cut(s) 89
Bsp1286I GDGCHC 1 cut(s) 121
Bsp143I GATC 1 cut(s) 282
BspACI CCGC 1 cut(s) 65
BspCNI CTCAG 1 cut(s) 207
BspLI GGNNCC 1 cut(s) 35
BspMI ACCTGC 1 cut(s) 136
BspQI GCTCTTC 1 cut(s) 161
BspTNI GGTCTC 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 171
BssECI CCNNGG 1 cut(s) 258
BssMI GATC 1 cut(s) 282
Bst2UI CCWGG 2 cut(s) 53, 328
Bst4CI ACNGT 2 cut(s) 79, 245
Bst6I CTCTTC 1 cut(s) 161
BstC8I GCNNGC 1 cut(s) 26
BstDEI CTNAG 1 cut(s) 194
BstF5I GGATG 1 cut(s) 337
BstKTI GATC 1 cut(s) 285
BstMAI GTCTC 2 cut(s) 80, 89
BstMBI GATC 1 cut(s) 282
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstNI CCWGG 2 cut(s) 53, 328
BstSCI CCNGG 2 cut(s) 51, 326
BstSLI GKGCMC 1 cut(s) 121
BstV1I GCAGC 1 cut(s) 118
BstX2I RGATCY 1 cut(s) 282
BstYI RGATCY 1 cut(s) 282
BsuI GTATCC 1 cut(s) 209
BtsCI GGATG 1 cut(s) 337
BtsIMutI CAGTG 3 cut(s) 84, 121, 250
BveI ACCTGC 1 cut(s) 136
Cac8I GCNNGC 1 cut(s) 26
CaiI CAGNNNCTG 1 cut(s) 413
Csp6I GTAC 1 cut(s) 18
CviAII CATG 2 cut(s) 83, 203
CviJI RGCY 3 cut(s) 13, 56, 266
CviKI_1 RGCY 3 cut(s) 13, 56, 266
CviQI GTAC 1 cut(s) 18
DdeI CTNAG 1 cut(s) 194
DpnI GATC 1 cut(s) 284
DpnII GATC 1 cut(s) 282
Eam1104I CTCTTC 1 cut(s) 161
EarI CTCTTC 1 cut(s) 161
Eco31I GGTCTC 1 cut(s) 89
EcoRII CCWGG 2 cut(s) 51, 326
Esp3I CGTCTC 1 cut(s) 80
FaeI CATG 2 cut(s) 86, 206
FaiI YATR 6 cut(s) 84, 187, 204, 306, 350, 369
FatI CATG 2 cut(s) 82, 202
Fnu4HI GCNGC 1 cut(s) 132
FokI GGATG 1 cut(s) 324
Fsp4HI GCNGC 1 cut(s) 132
GluI GCNGC 1 cut(s) 132
Hin1II CATG 2 cut(s) 86, 206
HinfI GANTC 2 cut(s) 137, 297
Hpy166II GTNNAC 1 cut(s) 119
Hpy188I TCNGA 2 cut(s) 262, 270
Hpy8I GTNNAC 1 cut(s) 119
HpyAV CCTTC 1 cut(s) 259
HpyCH4III ACNGT 2 cut(s) 79, 245
HpyCH4V TGCA 4 cut(s) 28, 44, 82, 119
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpyF3I CTNAG 1 cut(s) 194
Hsp92II CATG 2 cut(s) 86, 206
Kzo9I GATC 1 cut(s) 282
LguI GCTCTTC 1 cut(s) 161
LpnPI CCDG 7 cut(s) 14, 38, 65, 141, 313, 340, 354
Lsp1109I GCAGC 1 cut(s) 118
LweI GCATC 1 cut(s) 419
MalI GATC 1 cut(s) 284
MboI GATC 1 cut(s) 282
MboII GAAGA 4 cut(s) 163, 178, 292, 306
MflI RGATCY 1 cut(s) 282
MhlI GDGCHC 1 cut(s) 121
MluCI AATT 3 cut(s) 109, 228, 238
MmeI TCCRAC 1 cut(s) 148
MnlI CCTC 3 cut(s) 203, 256, 268
MseI TTAA 3 cut(s) 39, 345, 381
MspR9I CCNGG 2 cut(s) 53, 328
Mva1269I GAATGC 1 cut(s) 220
MvaI CCWGG 2 cut(s) 53, 328
MwoI GCNNNNNNNGC 1 cut(s) 62
NdeII GATC 1 cut(s) 282
NlaIII CATG 2 cut(s) 86, 206
NlaIV GGNNCC 1 cut(s) 35
PciSI GCTCTTC 1 cut(s) 161
PctI GAATGC 1 cut(s) 220
PfeI GAWTC 2 cut(s) 137, 297
PkrI GCNGC 1 cut(s) 133
Psp6I CCWGG 2 cut(s) 51, 326
PspGI CCWGG 2 cut(s) 51, 326
PspN4I GGNNCC 1 cut(s) 35
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 1 cut(s) 282
RsaI GTAC 1 cut(s) 19
RsaNI GTAC 1 cut(s) 18
SapI GCTCTTC 1 cut(s) 161
SaqAI TTAA 3 cut(s) 39, 345, 381
SatI GCNGC 1 cut(s) 132
Sau3AI GATC 1 cut(s) 282
ScrFI CCNGG 2 cut(s) 53, 328
SduI GDGCHC 1 cut(s) 121
SetI ASST 3 cut(s) 130, 329, 364
SfaNI GCATC 1 cut(s) 419
Sse9I AATT 3 cut(s) 109, 228, 238
SsiI CCGC 1 cut(s) 65
StyD4I CCNGG 2 cut(s) 51, 326
TaaI ACNGT 2 cut(s) 79, 245
TasI AATT 3 cut(s) 109, 228, 238
TfiI GAWTC 2 cut(s) 137, 297
Tru1I TTAA 3 cut(s) 39, 345, 381
Tru9I TTAA 3 cut(s) 39, 345, 381
TscAI CASTG 3 cut(s) 84, 121, 250
TseI GCWGC 1 cut(s) 131
TspDTI ATGAA 4 cut(s) 174, 241, 324, 326
TspRI CASTG 3 cut(s) 84, 121, 250
VneI GTGCAC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.