Rroxscaffold_4G00289500
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000305
Physical Location & Seq
Reverse (-)
10109411 .. 10113841
4431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00289500.1

Sequence Viewer

Length: 1410 bp
ATGAGTGGTGGGCTTCGGACAAGCGTGAAGGGGTACATTATTGCACAACGGGTCACTGGGGCACTGGAAATAAACACAGTGCACGAGAATGAGAATGAGAATGAGACGAGCATATCTGTAACTAGCAATTCCACAGCTGCTGACTCTGTGGATCATCCACCTCCGCCTTCAGTTCCAGAGACTTCAGCTTCATACGGGCTCAATATCTGTGATGGGAACATTCCTTGCTTTTCAATGTTGAGCTCTGCTGCAGAGTGTATGGCTTCTTATGGGACTACAACCGGTGCTGAGTGTCCTCCTCACACTGGATTGAATTCTAAAATCAAGGTGTCATCAATCTCAGTGCCTTCAACCCCTCGAACAGAGGGTGAAATCTTGCTGTTCCCCACCTTAAAGACCTTCTCCTTTAGTGAACTGAAAAGATCTACCAGGAAATTTCGTTCTGATAATATGTTGGGAGAAGGTGGTTTGGGTTGGGTTGATGGGAATTCACTAACAGCTGCCAAGCCTGGTACTGGCATGGTCATTGCTGTGAAGAGGCTTAACCGACAAAGTCTTCAGGGTCACAAGGAATGGATGACAGAAATTAACTACCTTGGAAGGCTGCGTCATCCGAATCTTGTGAAATTGATTGGTTATTGCACTGAGGATGACGACCGCCTTTTGGTGTACGAATTTATGCCTTGTGGAAGCTTGAATAATCATCTATTTAGAAAAAGCAATGCCGGACTTCATTATTGTTGGAACAGGGGTTCTTACTCTCAATCACTGTCATGGACGCTTCGTATGAAGATTGCCTTTGGGGCTGCTAAGGTGCTAGCATTTCTTCACAGTGGTGAGGAAACTTCTGGTAGACTTGCTCACACCATATTTTCATTGGAAAATAACAGACCTACAATGCAAAACTCTGTAGTTTTTGTCTGGCCAAGGATGGGCCAGAAGGTGATAGAAGTCATATCTCAACTAGGGTCATGGGGACATCTGGATATGCAGCTCCTGAATATGTGGCCACAGAACAAATTATCACGTGTGCTCCCTTGTAATCATTGTTTCGGTCCTTCTGCTTATGTTGAAGGTCATTTGACTGCCAAATGTGATGTATATGCGTTTGGAGTTGTTATGCTCGAAATGTTGTCTGGAAAACGAGCTATGGACACGAACTCGCCAGCTGGGAAATCCAATTTAGTTGAGTGGAGTCAATGGACCAATTCTGACATTGTCAGCAAACAAAAAGTTCTCCAAATTATCGATGCTCGTGTTGAAGGACAGTACTCTGTTGCTAGAGCTCTTAAAGCAGCTGACCTTGCATTTCGCTGCCTATCAACAGATCCCAAGCTTAGGCCAAACATGAATGATGTGATAAAAGTTTTGGAGGAGCTTCAGGAATCTGGTGACATGTCTCATAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0035821 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0075136 GO:0080134 GO:0098542 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

469

Amino Acids

51.67

Weight (kDa)

7.96

Isoelectric Point (pI)

39.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 148 - 240 2.1e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 149 - 278 2.4e-16 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 853
AciI CCGC 2 cut(s) 164, 658
AclWI GGATC 2 cut(s) 159, 1322
AcoI YGGCCR 2 cut(s) 923, 1007
AcsI RAATTY 4 cut(s) 313, 434, 487, 674
AcuI CTGAAG 4 cut(s) 153, 168, 542, 1364
AcvI CACGTG 1 cut(s) 1028
AfaI GTAC 4 cut(s) 35, 514, 671, 1271
AfiI CCNNNNNNNGG 5 cut(s) 305, 515, 664, 932, 1338
AflIII ACRYGT 2 cut(s) 1027, 1395
AgeI ACCGGT 1 cut(s) 281
AgsI TTSAA 6 cut(s) 234, 313, 351, 697, 1073, 1262
AjnI CCWGG 2 cut(s) 428, 508
AleI CACNNNNGTG 1 cut(s) 834
AloI GAACNNNNNNTCC 4 cut(s) 424, 456, 736, 768
Alw21I GWGCWC 4 cut(s) 84, 245, 1035, 1288
Alw26I GTCTC 3 cut(s) 98, 173, 1404
Alw44I GTGCAC 1 cut(s) 80
AlwI GGATC 2 cut(s) 159, 1322
AlwNI CAGNNNCTG 2 cut(s) 140, 997
AoxI GGCC 4 cut(s) 923, 934, 1007, 1340
ApaLI GTGCAC 1 cut(s) 80
ApeKI GCWGC 8 cut(s) 137, 248, 500, 604, 806, 991, 1295, 1314
ApoI RAATTY 4 cut(s) 313, 434, 487, 674
AsiGI ACCGGT 1 cut(s) 281
AspS9I GGNCC 3 cut(s) 934, 1055, 1203
AsuHPI GGTGA 4 cut(s) 380, 848, 955, 1403
AsuNHI GCTAGC 1 cut(s) 817
AvaII GGWCC 2 cut(s) 1055, 1203
BaeGI GKGCMC 2 cut(s) 64, 84
BalI TGGCCA 2 cut(s) 925, 1009
BanII GRGCYC 3 cut(s) 201, 245, 1288
BauI CACGAG 2 cut(s) 83, 1254
BbrPI CACGTG 1 cut(s) 1028
BbsI GAAGAC 1 cut(s) 548
Bbv12I GWGCWC 4 cut(s) 84, 245, 1035, 1288
BbvI GCAGC 8 cut(s) 124, 235, 487, 591, 793, 1003, 1301, 1307
BccI CCATC 3 cut(s) 206, 476, 925
BciT130I CCWGG 2 cut(s) 430, 510
BcoDI GTCTC 3 cut(s) 98, 173, 1404
BfaI CTAG 4 cut(s) 123, 818, 965, 1281
BfmI CTRYAG 2 cut(s) 249, 909
BglI GCCNNNNNGGC 1 cut(s) 803
BglII AGATCT 1 cut(s) 422
BisI GCNGC 8 cut(s) 138, 249, 501, 605, 807, 992, 1296, 1315
BlsI GCNGC 8 cut(s) 139, 250, 502, 606, 808, 993, 1297, 1316
BmcAI AGTACT 1 cut(s) 1271
Bme1390I CCNGG 2 cut(s) 430, 510
Bme18I GGWCC 2 cut(s) 1055, 1203
BmgT120I GGNCC 3 cut(s) 934, 1055, 1203
BmrFI CCNGG 2 cut(s) 430, 510
BmrI ACTGGG 1 cut(s) 66
BmsI GCATC 1 cut(s) 1240
BmtI GCTAGC 1 cut(s) 821
BmuI ACTGGG 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 548
Bpu10I CCTNAGC 2 cut(s) 810, 1337
Bsa29I ATCGAT 1 cut(s) 1248
BsaAI YACGTR 1 cut(s) 1028
BsaJI CCNNGG 2 cut(s) 595, 926
BsaWI WCCGGW 1 cut(s) 281
BsaXI ACNNNNNCTCC 2 cut(s) 1017, 1047
Bsc4I CCNNNNNNNGG 5 cut(s) 305, 515, 664, 932, 1338
Bse118I RCCGGY 1 cut(s) 281
Bse1I ACTGG 4 cut(s) 61, 69, 310, 520
Bse3DI GCAATG 2 cut(s) 525, 727
BseBI CCWGG 2 cut(s) 430, 510
BseCI ATCGAT 1 cut(s) 1248
BseDI CCNNGG 2 cut(s) 595, 926
BseGI GGATG 5 cut(s) 154, 582, 610, 655, 936
BseLI CCNNNNNNNGG 5 cut(s) 305, 515, 664, 932, 1338
BseMI GCAATG 2 cut(s) 525, 727
BseMII CTCAG 3 cut(s) 279, 354, 636
BseNI ACTGG 4 cut(s) 61, 69, 310, 520
BseRI GAGGAG 2 cut(s) 288, 1388
BseSI GKGCMC 2 cut(s) 64, 84
BseXI GCAGC 8 cut(s) 124, 235, 487, 591, 793, 1003, 1301, 1307
BseYI CCCAGC 1 cut(s) 1169
Bsh1285I CGRYCG 1 cut(s) 658
BshFI GGCC 4 cut(s) 925, 936, 1009, 1342
BshTI ACCGGT 1 cut(s) 281
BshVI ATCGAT 1 cut(s) 1248
BsiEI CGRYCG 1 cut(s) 658
BsiHKAI GWGCWC 4 cut(s) 84, 245, 1035, 1288
BsiSI CCGG 2 cut(s) 282, 726
BslFI GGGAC 2 cut(s) 286, 990
BslI CCNNNNNNNGG 5 cut(s) 305, 515, 664, 932, 1338
BsmAI GTCTC 3 cut(s) 98, 173, 1404
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 2 cut(s) 286, 990
BsnI GGCC 4 cut(s) 925, 936, 1009, 1342
Bsp1286I GDGCHC 6 cut(s) 64, 84, 201, 245, 1035, 1288
Bsp143I GATC 3 cut(s) 151, 422, 1327
BspACI CCGC 2 cut(s) 164, 658
BspANI GGCC 4 cut(s) 925, 936, 1009, 1342
BspCNI CTCAG 3 cut(s) 280, 353, 637
BspDI ATCGAT 1 cut(s) 1248
BspMAI CTGCAG 1 cut(s) 253
BspOI GCTAGC 1 cut(s) 821
BspPI GGATC 2 cut(s) 159, 1322
BsrDI GCAATG 2 cut(s) 525, 727
BsrFI RCCGGY 1 cut(s) 281
BsrI ACTGG 4 cut(s) 61, 69, 310, 520
BssAI RCCGGY 1 cut(s) 281
BssECI CCNNGG 2 cut(s) 595, 926
BssMI GATC 3 cut(s) 151, 422, 1327
BssSI CACGAG 2 cut(s) 83, 1254
BssT1I CCWWGG 2 cut(s) 595, 926
Bst2BI CACGAG 2 cut(s) 83, 1254
Bst2UI CCWGG 2 cut(s) 430, 510
Bst4CI ACNGT 4 cut(s) 79, 771, 833, 1269
Bst6I CTCTTC 1 cut(s) 530
BstBAI YACGTR 1 cut(s) 1028
BstC8I GCNNGC 2 cut(s) 819, 1167
BstDEI CTNAG 5 cut(s) 288, 340, 645, 810, 1337
BstF5I GGATG 5 cut(s) 154, 582, 610, 655, 936
BstKTI GATC 3 cut(s) 154, 425, 1330
BstMAI GTCTC 3 cut(s) 98, 173, 1404
BstMBI GATC 3 cut(s) 151, 422, 1327
BstMCI CGRYCG 1 cut(s) 658
BstMWI GCNNNNNNNGC 3 cut(s) 803, 1292, 1304
BstNI CCWGG 2 cut(s) 430, 510
BstNSI RCATGY 1 cut(s) 1399
BstSCI CCNGG 2 cut(s) 428, 508
BstSFI CTRYAG 2 cut(s) 249, 909
BstSLI GKGCMC 2 cut(s) 64, 84
BstV1I GCAGC 8 cut(s) 124, 235, 487, 591, 793, 1003, 1301, 1307
BstV2I GAAGAC 1 cut(s) 548
BstX2I RGATCY 2 cut(s) 422, 1327
BstYI RGATCY 2 cut(s) 422, 1327
Bsu15I ATCGAT 1 cut(s) 1248
BsuRI GGCC 4 cut(s) 925, 936, 1009, 1342
BsuTUI ATCGAT 1 cut(s) 1248
BtsCI GGATG 5 cut(s) 154, 582, 610, 655, 936
BtsIMutI CAGTG 8 cut(s) 54, 62, 84, 303, 348, 642, 767, 838
Cac8I GCNNGC 2 cut(s) 819, 1167
CaiI CAGNNNCTG 2 cut(s) 140, 997
Cfr10I RCCGGY 1 cut(s) 281
Cfr13I GGNCC 3 cut(s) 934, 1055, 1203
ClaI ATCGAT 1 cut(s) 1248
CseI GACGC 2 cut(s) 596, 787
Csp6I GTAC 4 cut(s) 34, 513, 670, 1270
CspAI ACCGGT 1 cut(s) 281
CviAII CATG 5 cut(s) 520, 774, 972, 1348, 1396
CviQI GTAC 4 cut(s) 34, 513, 670, 1270
DdeI CTNAG 5 cut(s) 288, 340, 645, 810, 1337
DpnI GATC 3 cut(s) 153, 424, 1329
DpnII GATC 3 cut(s) 151, 422, 1327
EaeI YGGCCR 2 cut(s) 923, 1007
Eam1104I CTCTTC 1 cut(s) 530
EarI CTCTTC 1 cut(s) 530
EciI GGCGGA 1 cut(s) 153
Ecl136II GAGCTC 2 cut(s) 243, 1286
Eco130I CCWWGG 2 cut(s) 595, 926
Eco24I GRGCYC 3 cut(s) 201, 245, 1288
Eco47I GGWCC 2 cut(s) 1055, 1203
Eco53kI GAGCTC 2 cut(s) 243, 1286
Eco57I CTGAAG 4 cut(s) 153, 168, 542, 1364
Eco72I CACGTG 1 cut(s) 1028
EcoICRI GAGCTC 2 cut(s) 243, 1286
EcoRI GAATTC 2 cut(s) 313, 487
EcoRII CCWGG 2 cut(s) 428, 508
EcoT14I CCWWGG 2 cut(s) 595, 926
EcoT38I GRGCYC 3 cut(s) 201, 245, 1288
ErhI CCWWGG 2 cut(s) 595, 926
Esp3I CGTCTC 1 cut(s) 98
FaeI CATG 5 cut(s) 523, 777, 975, 1351, 1399
FalI AAGNNNNNCTT 2 cut(s) 782, 814
FaqI GGGAC 2 cut(s) 286, 990
FatI CATG 5 cut(s) 519, 773, 971, 1347, 1395
FblI GTMKAC 1 cut(s) 853
Fnu4HI GCNGC 8 cut(s) 138, 249, 501, 605, 807, 992, 1296, 1315
FokI GGATG 5 cut(s) 141, 589, 597, 662, 943
FriOI GRGCYC 3 cut(s) 201, 245, 1288
Fsp4HI GCNGC 8 cut(s) 138, 249, 501, 605, 807, 992, 1296, 1315
FspBI CTAG 4 cut(s) 123, 818, 965, 1281
GluI GCNGC 8 cut(s) 138, 249, 501, 605, 807, 992, 1296, 1315
GsaI CCCAGC 1 cut(s) 1173
HaeIII GGCC 4 cut(s) 925, 936, 1009, 1342
HapII CCGG 2 cut(s) 282, 726
HgaI GACGC 2 cut(s) 596, 787
Hin1II CATG 5 cut(s) 523, 777, 975, 1351, 1399
HindIII AAGCTT 2 cut(s) 691, 1334
HinfI GANTC 4 cut(s) 143, 616, 1195, 1385
HpaII CCGG 2 cut(s) 282, 726
HphI GGTGA 4 cut(s) 380, 848, 955, 1403
Hpy166II GTNNAC 4 cut(s) 82, 413, 670, 854
Hpy188I TCNGA 4 cut(s) 18, 445, 615, 1213
Hpy188III TCNNGA 5 cut(s) 176, 983, 997, 1137, 1382
Hpy8I GTNNAC 4 cut(s) 82, 413, 670, 854
HpyCH4III ACNGT 4 cut(s) 79, 771, 833, 1269
HpyCH4IV ACGT 1 cut(s) 1027
HpyCH4V TGCA 7 cut(s) 44, 82, 251, 642, 901, 991, 1307
HpyF10VI GCNNNNNNNGC 3 cut(s) 803, 1292, 1304
HpyF3I CTNAG 5 cut(s) 288, 340, 645, 810, 1337
HpySE526I ACGT 1 cut(s) 1027
Hsp92II CATG 5 cut(s) 523, 777, 975, 1351, 1399
Kzo9I GATC 3 cut(s) 151, 422, 1327
LmnI GCTCC 3 cut(s) 999, 1038, 1375
Lsp1109I GCAGC 8 cut(s) 124, 235, 487, 591, 793, 1003, 1301, 1307
LweI GCATC 1 cut(s) 1240
MaeI CTAG 4 cut(s) 123, 818, 965, 1281
MaeII ACGT 1 cut(s) 1027
MaeIII GTNAC 4 cut(s) 52, 118, 563, 1391
MalI GATC 3 cut(s) 153, 424, 1329
MboI GATC 3 cut(s) 151, 422, 1327
MboII GAAGA 4 cut(s) 547, 548, 802, 818
MflI RGATCY 2 cut(s) 422, 1327
MhlI GDGCHC 6 cut(s) 64, 84, 201, 245, 1035, 1288
MlsI TGGCCA 2 cut(s) 925, 1009
MluNI TGGCCA 2 cut(s) 925, 1009
MlyI GAGTC 2 cut(s) 137, 1204
MmeI TCCRAC 1 cut(s) 722
MnlI CCTC 9 cut(s) 171, 306, 309, 358, 366, 531, 640, 832, 1366
Mox20I TGGCCA 2 cut(s) 925, 1009
MscI TGGCCA 2 cut(s) 925, 1009
MseI TTAA 4 cut(s) 392, 543, 588, 1290
MslI CAYNNNNRTG 4 cut(s) 87, 530, 772, 834
Msp20I TGGCCA 2 cut(s) 925, 1009
MspA1I CMGCKG 4 cut(s) 137, 500, 1169, 1298
MspI CCGG 2 cut(s) 282, 726
MspR9I CCNGG 2 cut(s) 430, 510
MvaI CCWGG 2 cut(s) 430, 510
MwoI GCNNNNNNNGC 3 cut(s) 803, 1292, 1304
NdeII GATC 3 cut(s) 151, 422, 1327
NheI GCTAGC 1 cut(s) 817
NlaIII CATG 5 cut(s) 523, 777, 975, 1351, 1399
NmuCI GTSAC 3 cut(s) 52, 563, 1391
NspI RCATGY 1 cut(s) 1399
OliI CACNNNNGTG 1 cut(s) 834
PciI ACATGT 1 cut(s) 1395
PfeI GAWTC 2 cut(s) 616, 1385
PflFI GACNNNGTC 2 cut(s) 552, 1217
PinAI ACCGGT 1 cut(s) 281
PkrI GCNGC 8 cut(s) 139, 250, 502, 606, 808, 993, 1297, 1316
PleI GAGTC 2 cut(s) 137, 1203
PmaCI CACGTG 1 cut(s) 1028
PmlI CACGTG 1 cut(s) 1028
PpsI GAGTC 2 cut(s) 137, 1203
Ppu21I YACGTR 1 cut(s) 1028
PscI ACATGT 1 cut(s) 1395
Psp124BI GAGCTC 2 cut(s) 245, 1288
Psp6I CCWGG 2 cut(s) 428, 508
PspCI CACGTG 1 cut(s) 1028
PspFI CCCAGC 1 cut(s) 1169
PspGI CCWGG 2 cut(s) 428, 508
PspPI GGNCC 3 cut(s) 934, 1055, 1203
PstI CTGCAG 1 cut(s) 253
PstNI CAGNNNCTG 2 cut(s) 140, 997
PsuI RGATCY 2 cut(s) 422, 1327
PsyI GACNNNGTC 2 cut(s) 552, 1217
PvuII CAGCTG 4 cut(s) 137, 500, 1169, 1298
RsaI GTAC 4 cut(s) 35, 514, 671, 1271
RsaNI GTAC 4 cut(s) 34, 513, 670, 1270
RseI CAYNNNNRTG 4 cut(s) 87, 530, 772, 834
SacI GAGCTC 2 cut(s) 245, 1288
SaqAI TTAA 4 cut(s) 392, 543, 588, 1290
SatI GCNGC 8 cut(s) 138, 249, 501, 605, 807, 992, 1296, 1315
Sau3AI GATC 3 cut(s) 151, 422, 1327
Sau96I GGNCC 3 cut(s) 934, 1055, 1203
ScaI AGTACT 1 cut(s) 1271
SchI GAGTC 2 cut(s) 137, 1204
ScrFI CCNGG 2 cut(s) 430, 510
SduI GDGCHC 6 cut(s) 64, 84, 201, 245, 1035, 1288
SfaNI GCATC 1 cut(s) 1240
SfcI CTRYAG 2 cut(s) 249, 909
SinI GGWCC 2 cut(s) 1055, 1203
SmiMI CAYNNNNRTG 4 cut(s) 87, 530, 772, 834
SsiI CCGC 2 cut(s) 164, 658
SspMI CTAG 4 cut(s) 123, 818, 965, 1281
SstI GAGCTC 2 cut(s) 245, 1288
StyD4I CCNGG 2 cut(s) 428, 508
StyI CCWWGG 2 cut(s) 595, 926
TaaI ACNGT 4 cut(s) 79, 771, 833, 1269
TaiI ACGT 1 cut(s) 1030
TaqI TCGA 3 cut(s) 358, 1125, 1248
TaqII GACCGA 1 cut(s) 1043
TatI WGTACW 1 cut(s) 1269
TfiI GAWTC 2 cut(s) 616, 1385
Tru1I TTAA 4 cut(s) 392, 543, 588, 1290
Tru9I TTAA 4 cut(s) 392, 543, 588, 1290
TscAI CASTG 8 cut(s) 61, 69, 84, 310, 348, 649, 774, 838
TseFI GTSAC 3 cut(s) 52, 563, 1391
TseI GCWGC 8 cut(s) 137, 248, 500, 604, 806, 991, 1295, 1314
Tsp45I GTSAC 3 cut(s) 52, 563, 1391
TspDTI ATGAA 5 cut(s) 180, 722, 803, 864, 1364
TspRI CASTG 8 cut(s) 61, 69, 84, 310, 348, 649, 774, 838
Tth111I GACNNNGTC 2 cut(s) 552, 1217
VneI GTGCAC 1 cut(s) 80
VpaK11BI GGWCC 2 cut(s) 1055, 1203
XapI RAATTY 4 cut(s) 313, 434, 487, 674
XceI RCATGY 1 cut(s) 1399
XcmI CCANNNNNNNNNTGG 1 cut(s) 874
XmiI GTMKAC 1 cut(s) 853
XspI CTAG 4 cut(s) 123, 818, 965, 1281
ZrmI AGTACT 1 cut(s) 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.