Rorug05G0114700

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000305
Physical Location & Seq
Forward (+)
10194718 .. 10196509
1792 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0114700.1

Sequence Viewer

Length: 954 bp
ATGGACTCTGCACTTTGTCTCCATCGTGGTGCTCTACACATTCCTTCCACCACTAGCCGTGCAGCCGGATTAGCAAGGCCTTATTCCAGTTTCGAACCTTCTTCTCTTTCACTTTTTTCAAAGGCTTCCACATACCCCACCCTATCGCGACACACCTTCTGTAGTCCTGTAATATGTGTACTTAACCAGCCCTCGCCACCTTCGCCAAACTACGACAAAGACAATGGTAAAAGAATTGTGATAATGGTGGGGGGTGCTTCTGTAGTTTTGGCTTGTGTCCTTGGAGTCATCAACTACAACTTCAATTTCATTCCCACGGCCATTGCAGGGCAAAAGAAAAGTTTGTCGCGCACACATAAAGAAAGGCCAGAGGAACCAGTAGTCGTGTCTAGGCCAGAAGAAGTGTTAGATTCGTTGTTGAAGGTGAATAGACATTTGTGTAACCAAAAAAAAAGAAACAAGATAGGCCCATCGATATCCAGGATGTTCAAATCGACAAAGCTGCTGCCGTCTATTCCCGACAGACCTACAAAGGAACACTTCGACAATCTTAAGATTGCAGTAGCGGATTTAATCAAGTCCGGAAAGTGCGATGAGGCAGAGACAAAACTTAGAGGGTTATACGAAAACATCCAAGGGAGTGAAGTTAAATACAATGTGGAGATGGAATTGGTACTAGTTCTCATTTTCCAGGGAAAATACGAAGAAGCTTTGAAATGTAGATGTCTCAGTCATGATGCCAGGGTTGGTGGGGATGGTCGATTTCCATATTACAAGGCTATTATCTACACCATGCTGAGTGGTGATGCTCGTGATAAAGCCGAGAGAGATAAAGCCGAGAAATACTCGCAAAAAGCCCAGATGTACTGGCAACAGTTTTTCAACTCCTTTTCCAGTCAACCACCTATACTGGTTGAGGTTCCGACTCCAAAGTCTGAAAGACAGCAACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

317

Amino Acids

35.57

Weight (kDa)

9.38

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 931
AccII CGCG 2 cut(s) 148, 349
AccIII TCCGGA 1 cut(s) 581
AciI CCGC 1 cut(s) 566
AcoI YGGCCR 1 cut(s) 318
AfaI GTAC 3 cut(s) 180, 675, 866
AfiI CCNNNNNNNGG 1 cut(s) 327
AflII CTTAAG 1 cut(s) 551
AgsI TTSAA 6 cut(s) 120, 304, 421, 490, 715, 883
AhlI ACTAGT 1 cut(s) 676
AjnI CCWGG 3 cut(s) 479, 690, 740
AluBI AGCT 2 cut(s) 502, 710
AluI AGCT 2 cut(s) 502, 710
Alw21I GWGCWC 1 cut(s) 34
Alw26I GTCTC 3 cut(s) 23, 596, 731
Aor13HI TCCGGA 1 cut(s) 581
AoxI GGCC 5 cut(s) 77, 318, 365, 392, 466
ApeKI GCWGC 3 cut(s) 62, 502, 505
AspLEI GCGC 1 cut(s) 351
AspS9I GGNCC 1 cut(s) 467
AsuHPI GGTGA 2 cut(s) 436, 815
AsuII TTCGAA 1 cut(s) 93
BauI CACGAG 1 cut(s) 810
Bbv12I GWGCWC 1 cut(s) 34
BbvI GCAGC 3 cut(s) 74, 489, 492
BccI CCATC 4 cut(s) 30, 478, 658, 749
BceAI ACGGC 3 cut(s) 42, 333, 493
BcgI CGANNNNNNTGC 2 cut(s) 484, 518
BciT130I CCWGG 3 cut(s) 481, 692, 742
BcoDI GTCTC 3 cut(s) 23, 596, 731
BcuI ACTAGT 1 cut(s) 676
BfaI CTAG 3 cut(s) 54, 390, 677
BfmI CTRYAG 2 cut(s) 160, 261
BfrI CTTAAG 1 cut(s) 551
BisI GCNGC 3 cut(s) 63, 503, 506
BlsI GCNGC 3 cut(s) 64, 504, 507
Bme1390I CCNGG 3 cut(s) 481, 692, 742
BmgT120I GGNCC 1 cut(s) 467
BmiI GGNNCC 2 cut(s) 375, 921
BmrFI CCNGG 3 cut(s) 481, 692, 742
BmsI GCATC 2 cut(s) 727, 796
BplI GAGNNNNNCTC 2 cut(s) 830, 862
Bpu14I TTCGAA 1 cut(s) 93
Bsa29I ATCGAT 1 cut(s) 473
BsaJI CCNNGG 5 cut(s) 280, 315, 634, 691, 741
BsaWI WCCGGW 1 cut(s) 581
BsaXI ACNNNNNCTCC 1 cut(s) 33
Bsc4I CCNNNNNNNGG 1 cut(s) 327
Bse1I ACTGG 5 cut(s) 87, 377, 872, 894, 915
Bse3DI GCAATG 1 cut(s) 321
BseAI TCCGGA 1 cut(s) 581
BseBI CCWGG 3 cut(s) 481, 692, 742
BseCI ATCGAT 1 cut(s) 473
BseDI CCNNGG 5 cut(s) 280, 315, 634, 691, 741
BseGI GGATG 3 cut(s) 489, 630, 760
BseLI CCNNNNNNNGG 1 cut(s) 327
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 2 cut(s) 742, 788
BseNI ACTGG 5 cut(s) 87, 377, 872, 894, 915
BseXI GCAGC 3 cut(s) 74, 489, 492
BsgI GTGCAG 1 cut(s) 81
Bsh1236I CGCG 2 cut(s) 148, 349
BshFI GGCC 5 cut(s) 79, 320, 367, 394, 468
BshVI ATCGAT 1 cut(s) 473
BsiHKAI GWGCWC 1 cut(s) 34
BsiSI CCGG 2 cut(s) 66, 582
BslI CCNNNNNNNGG 1 cut(s) 327
BsmAI GTCTC 3 cut(s) 23, 596, 731
BsnI GGCC 5 cut(s) 79, 320, 367, 394, 468
Bsp119I TTCGAA 1 cut(s) 93
Bsp1286I GDGCHC 1 cut(s) 34
Bsp13I TCCGGA 1 cut(s) 581
Bsp68I TCGCGA 1 cut(s) 148
BspACI CCGC 1 cut(s) 566
BspANI GGCC 5 cut(s) 79, 320, 367, 394, 468
BspCNI CTCAG 2 cut(s) 741, 789
BspDI ATCGAT 1 cut(s) 473
BspEI TCCGGA 1 cut(s) 581
BspFNI CGCG 2 cut(s) 148, 349
BspHI TCATGA 1 cut(s) 733
BspLI GGNNCC 2 cut(s) 375, 921
BspT104I TTCGAA 1 cut(s) 93
BspTI CTTAAG 1 cut(s) 551
BsrDI GCAATG 1 cut(s) 321
BsrI ACTGG 5 cut(s) 87, 377, 872, 894, 915
BssECI CCNNGG 5 cut(s) 280, 315, 634, 691, 741
BssSI CACGAG 1 cut(s) 810
BssT1I CCWWGG 2 cut(s) 280, 634
Bst2BI CACGAG 1 cut(s) 810
Bst2UI CCWGG 3 cut(s) 481, 692, 742
Bst4CI ACNGT 1 cut(s) 876
BstAFI CTTAAG 1 cut(s) 551
BstBI TTCGAA 1 cut(s) 93
BstDEI CTNAG 3 cut(s) 611, 728, 797
BstDSI CCRYGG 1 cut(s) 315
BstF5I GGATG 3 cut(s) 489, 630, 760
BstFNI CGCG 2 cut(s) 148, 349
BstHHI GCGC 1 cut(s) 351
BstMAI GTCTC 3 cut(s) 23, 596, 731
BstMWI GCNNNNNNNGC 2 cut(s) 71, 202
BstNI CCWGG 3 cut(s) 481, 692, 742
BstSCI CCNGG 3 cut(s) 479, 690, 740
BstSFI CTRYAG 2 cut(s) 160, 261
BstUI CGCG 2 cut(s) 148, 349
BstV1I GCAGC 3 cut(s) 74, 489, 492
Bsu15I ATCGAT 1 cut(s) 473
BsuRI GGCC 5 cut(s) 79, 320, 367, 394, 468
BsuTUI ATCGAT 1 cut(s) 473
BtgI CCRYGG 1 cut(s) 315
BtgZI GCGATG 1 cut(s) 606
BtsCI GGATG 3 cut(s) 489, 630, 760
BtuMI TCGCGA 1 cut(s) 148
CciI TCATGA 1 cut(s) 733
CfoI GCGC 1 cut(s) 351
Cfr13I GGNCC 1 cut(s) 467
ClaI ATCGAT 1 cut(s) 473
Csp6I GTAC 3 cut(s) 179, 674, 865
CspCI CAANNNNNGTGG 2 cut(s) 304, 339
CviAII CATG 2 cut(s) 734, 793
CviQI GTAC 3 cut(s) 179, 674, 865
DdeI CTNAG 3 cut(s) 611, 728, 797
DrdI GACNNNNNNGTC 1 cut(s) 931
DseDI GACNNNNNNGTC 1 cut(s) 931
EaeI YGGCCR 1 cut(s) 318
Eco130I CCWWGG 2 cut(s) 280, 634
Eco147I AGGCCT 1 cut(s) 79
Eco32I GATATC 1 cut(s) 477
EcoRII CCWGG 3 cut(s) 479, 690, 740
EcoRV GATATC 1 cut(s) 477
EcoT14I CCWWGG 2 cut(s) 280, 634
ErhI CCWWGG 2 cut(s) 280, 634
FaeI CATG 2 cut(s) 737, 796
FaiI YATR 8 cut(s) 133, 175, 357, 622, 735, 769, 794, 908
FalI AAGNNNNNCTT 2 cut(s) 524, 556
FatI CATG 2 cut(s) 733, 792
Fnu4HI GCNGC 3 cut(s) 63, 503, 506
FokI GGATG 3 cut(s) 496, 617, 767
Fsp4HI GCNGC 3 cut(s) 63, 503, 506
FspBI CTAG 3 cut(s) 54, 390, 677
GlaI GCGC 1 cut(s) 350
GluI GCNGC 3 cut(s) 63, 503, 506
HaeIII GGCC 5 cut(s) 79, 320, 367, 394, 468
HapII CCGG 2 cut(s) 66, 582
HhaI GCGC 1 cut(s) 351
Hin1II CATG 2 cut(s) 737, 796
Hin6I GCGC 1 cut(s) 349
HinP1I GCGC 1 cut(s) 349
HincII GTYRAC 1 cut(s) 899
HindII GTYRAC 1 cut(s) 899
HindIII AAGCTT 1 cut(s) 708
HinfI GANTC 4 cut(s) 5, 285, 410, 925
HpaII CCGG 2 cut(s) 66, 582
HphI GGTGA 2 cut(s) 436, 815
Hpy166II GTNNAC 2 cut(s) 179, 899
Hpy188I TCNGA 2 cut(s) 924, 937
Hpy188III TCNNGA 5 cut(s) 147, 518, 582, 734, 812
Hpy8I GTNNAC 2 cut(s) 179, 899
HpyAV CCTTC 5 cut(s) 54, 108, 166, 210, 415
HpyCH4III ACNGT 1 cut(s) 876
HpyCH4V TGCA 4 cut(s) 11, 62, 326, 560
HpyF10VI GCNNNNNNNGC 2 cut(s) 71, 202
HpyF3I CTNAG 3 cut(s) 611, 728, 797
Hsp92II CATG 2 cut(s) 737, 796
HspAI GCGC 1 cut(s) 349
Kpn2I TCCGGA 1 cut(s) 581
Lsp1109I GCAGC 3 cut(s) 74, 489, 492
LweI GCATC 2 cut(s) 727, 796
MaeI CTAG 3 cut(s) 54, 390, 677
MaeIII GTNAC 1 cut(s) 440
MboII GAAGA 3 cut(s) 93, 410, 716
MhlI GDGCHC 1 cut(s) 34
MluCI AATT 3 cut(s) 234, 304, 668
MlyI GAGTC 2 cut(s) 294, 919
MmeI TCCRAC 1 cut(s) 947
MnlI CCTC 5 cut(s) 202, 364, 589, 608, 910
MroI TCCGGA 1 cut(s) 581
MseI TTAA 4 cut(s) 183, 552, 572, 648
MslI CAYNNNNRTG 1 cut(s) 27
MspCI CTTAAG 1 cut(s) 551
MspI CCGG 2 cut(s) 66, 582
MspR9I CCNGG 3 cut(s) 481, 692, 742
MvaI CCWGG 3 cut(s) 481, 692, 742
MvnI CGCG 2 cut(s) 148, 349
MwoI GCNNNNNNNGC 2 cut(s) 71, 202
NlaIII CATG 2 cut(s) 737, 796
NlaIV GGNNCC 2 cut(s) 375, 921
NmeAIII GCCGAG 2 cut(s) 847, 862
NruI TCGCGA 1 cut(s) 148
NspV TTCGAA 1 cut(s) 93
PagI TCATGA 1 cut(s) 733
PceI AGGCCT 1 cut(s) 79
PfeI GAWTC 1 cut(s) 410
PfoI TCCNGGA 1 cut(s) 479
PkrI GCNGC 3 cut(s) 64, 504, 507
PleI GAGTC 2 cut(s) 293, 919
PpsI GAGTC 2 cut(s) 293, 919
Psp6I CCWGG 3 cut(s) 479, 690, 740
PspGI CCWGG 3 cut(s) 479, 690, 740
PspN4I GGNNCC 2 cut(s) 375, 921
PspPI GGNCC 1 cut(s) 467
RruI TCGCGA 1 cut(s) 148
RsaI GTAC 3 cut(s) 180, 675, 866
RsaNI GTAC 3 cut(s) 179, 674, 865
RseI CAYNNNNRTG 1 cut(s) 27
SaqAI TTAA 4 cut(s) 183, 552, 572, 648
SatI GCNGC 3 cut(s) 63, 503, 506
Sau96I GGNCC 1 cut(s) 467
SchI GAGTC 2 cut(s) 294, 919
ScrFI CCNGG 3 cut(s) 481, 692, 742
SduI GDGCHC 1 cut(s) 34
SetI ASST 9 cut(s) 100, 158, 202, 426, 504, 529, 712, 907, 921
SfaNI GCATC 2 cut(s) 727, 796
SfcI CTRYAG 2 cut(s) 160, 261
SfuI TTCGAA 1 cut(s) 93
SmiMI CAYNNNNRTG 1 cut(s) 27
SmlI CTYRAG 1 cut(s) 551
SmoI CTYRAG 1 cut(s) 551
SpeI ACTAGT 1 cut(s) 676
Sse9I AATT 3 cut(s) 234, 304, 668
SseBI AGGCCT 1 cut(s) 79
SsiI CCGC 1 cut(s) 566
SspMI CTAG 3 cut(s) 54, 390, 677
StuI AGGCCT 1 cut(s) 79
StyD4I CCNGG 3 cut(s) 479, 690, 740
StyI CCWWGG 2 cut(s) 280, 634
TaaI ACNGT 1 cut(s) 876
TaqI TCGA 5 cut(s) 93, 473, 494, 543, 760
TasI AATT 3 cut(s) 234, 304, 668
TatI WGTACW 2 cut(s) 178, 864
TfiI GAWTC 1 cut(s) 410
Tru1I TTAA 4 cut(s) 183, 552, 572, 648
Tru9I TTAA 4 cut(s) 183, 552, 572, 648
TseI GCWGC 3 cut(s) 62, 502, 505
TspDTI ATGAA 1 cut(s) 298
Vha464I CTTAAG 1 cut(s) 551
XspI CTAG 3 cut(s) 54, 390, 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.