Rh1DG335500
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000305
Physical Location & Seq
Forward (+)
56122249 .. 56125445
3197 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG335500.1

Sequence Viewer

Length: 1269 bp
ATGGGTGGAGGAATTCGCACAAGCGTGAAGGGGTACCTCCTTTCGCAGCGGATCACTACGGCTTCAGACACAGTGCATGCAAACGAGAGCACCAATAGAAATTTCACTGCGCCCCAAGCTGCTGATTTAGAACAAGAGACGAGCACGGACTTGGATTCATCTAACTCATATTGGCTCAGTAGGTTTAGTGGTAGCATTCCTTGCTTGCCGATATTGGGCTCTGCTTCAAAGAGCAGGGTTTCAAATAGAACTAGAATCAGAGCTGAGAGTCTGCCTCACAAAGTGCCTTCAACTCCTAGGACAGAGGTTGAGATCTTGCTAAAGAGCTTCTTTTTTAATGAACTGAAAACCGCCACCAGCAACTTTCGGCCTGATAATGTGGTGGGTGAGGGTGGTTTTGGTACCGTCTTTAAGGGGTGGCTTGATCAGAATTCATTAGCAGCTGCCAAGCCTGGTACAGGAATTGCTGTTGGTATAAAGAGGCTTAACCAAGAACGTCATCAGGGTCGGGAGGAATGGTTTGTGAGGAGTTCTCACTTTCAACCACTTTCGTGGACTGTTCGTATGAAGATTGCTCTTGGTGCTGCAAAGGCTCTAGCATTTCTTCACAATGAAGCAAAAGTTATACATCGTGACTTTAAAACATCTAATATCCTGTTGGATTCAACCTACAATGTTAAAATCTCTGATTTTGGTTTGGCTGTGGATGCACGAGCATTTGACAGACACCGAGGTGCTAAAACAAGGGTCATGGGCACATATGGATATGCAGCTCCTGATTACATAGAAACAAGGGTCATGGGCACATATGGATATGCAGCTCCTGAGTATGTAGCTACAGGTCGTTTGACCACCAAATGTGATGTGTATGGTTTTGGAGCTGTTATGCTCGAAATGATTTCCGGAAAACGAGTTTTTGACCGGAACCGGACACCCGGGGAACAGAACTTAGTTGAATGGGCCAAACCTTACCTTTTCAGCAAACACAGAGTCCTCCAAATTTTTGATCATCATATCAAAGGCCAGTTTTCTGTGGCCAGAGCTCTTAAAGCAGTTGACCTTGCATTTCTTTGCCTATCAAGAGATCCCAAGCTTAGGCCAAACATGAATAATGTGGTAAAAATATTGGAGAAGCTTCAGGAATCCAGTGATATGGATGGCTTGGGGATCTCTCAAAATAAACGACGCCAAATCCGCATGTCAGTTCAATCAATGGTCCCAAATACTGCAGGAGAAGTAGCATTGGAACCAGCAATTCAACATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0035821 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0075136 GO:0080134 GO:0098542 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

422

Amino Acids

46.94

Weight (kDa)

9.73

Isoelectric Point (pI)

33.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 181 - 375 1e-17 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 187 - 264 2.3e-16 Protein kinase domain
Pkinase PF00069 264 - 374 2.9e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 33, 401
AccB1I GGYRCC 2 cut(s) 33, 401
AccIII TCCGGA 1 cut(s) 902
AciI CCGC 3 cut(s) 49, 351, 1195
AclWI GGATC 3 cut(s) 59, 1079, 1175
AcoI YGGCCR 1 cut(s) 1035
AcsI RAATTY 4 cut(s) 12, 100, 430, 999
AcuI CTGAAG 2 cut(s) 48, 1121
AcyI GRCGYC 1 cut(s) 1186
AdeI CACNNNGTG 1 cut(s) 283
AfaI GTAC 3 cut(s) 35, 403, 457
AfiI CCNNNNNNNGG 3 cut(s) 215, 458, 1095
AgsI TTSAA 8 cut(s) 228, 243, 291, 542, 666, 956, 1208, 1259
AjnI CCWGG 1 cut(s) 451
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
AleI CACNNNNGTG 3 cut(s) 23, 550, 732
Alw21I GWGCWC 3 cut(s) 92, 146, 1045
Alw26I GTCTC 1 cut(s) 131
AlwI GGATC 3 cut(s) 59, 1079, 1175
AlwNI CAGNNNCTG 2 cut(s) 776, 824
Ama87I CYCGRG 1 cut(s) 935
Aor13HI TCCGGA 1 cut(s) 902
AoxI GGCC 5 cut(s) 368, 960, 1021, 1035, 1097
ApeKI GCWGC 7 cut(s) 46, 119, 440, 443, 584, 770, 818
ApoI RAATTY 4 cut(s) 12, 100, 430, 999
ArsI GACNNNNNNTTYG 2 cut(s) 975, 1007
Asp718I GGTACC 2 cut(s) 33, 401
AspA2I CCTAGG 1 cut(s) 296
AspLEI GCGC 1 cut(s) 112
AspS9I GGNCC 2 cut(s) 960, 1216
AsuC2I CCSGG 2 cut(s) 936, 937
AsuHPI GGTGA 1 cut(s) 398
AvaI CYCGRG 1 cut(s) 935
AvaII GGWCC 1 cut(s) 1216
AvrII CCTAGG 1 cut(s) 296
BaeGI GKGCMC 2 cut(s) 758, 806
BalI TGGCCA 1 cut(s) 1037
BanI GGYRCC 2 cut(s) 33, 401
BanII GRGCYC 2 cut(s) 221, 1045
BauI CACGAG 1 cut(s) 711
Bbv12I GWGCWC 3 cut(s) 92, 146, 1045
BbvI GCAGC 7 cut(s) 58, 106, 430, 452, 571, 782, 830
BccI CCATC 1 cut(s) 1151
BceAI ACGGC 1 cut(s) 75
BciT130I CCWGG 1 cut(s) 453
BclI TGATCA 2 cut(s) 424, 1006
BcnI CCSGG 2 cut(s) 936, 937
BcoDI GTCTC 1 cut(s) 131
BfaI CTAG 3 cut(s) 252, 297, 596
BfmI CTRYAG 2 cut(s) 837, 1227
BglII AGATCT 1 cut(s) 312
BisI GCNGC 7 cut(s) 47, 120, 441, 444, 585, 771, 819
BlnI CCTAGG 1 cut(s) 296
BlsI GCNGC 7 cut(s) 48, 121, 442, 445, 586, 772, 820
Bme1390I CCNGG 3 cut(s) 453, 936, 937
Bme18I GGWCC 1 cut(s) 1216
BmeT110I CYCGRG 1 cut(s) 935
BmgT120I GGNCC 2 cut(s) 960, 1216
BmiI GGNNCC 5 cut(s) 35, 403, 926, 1218, 1248
BmrFI CCNGG 3 cut(s) 453, 936, 937
BmsI GCATC 1 cut(s) 697
BplI GAGNNNNNCTC 4 cut(s) 259, 291, 517, 549
Bpu10I CCTNAGC 1 cut(s) 1094
BpuMI CCSGG 2 cut(s) 936, 937
BsaHI GRCGYC 1 cut(s) 1186
BsaJI CCNNGG 4 cut(s) 296, 730, 935, 936
BsaWI WCCGGW 3 cut(s) 902, 921, 927
BsaXI ACNNNNNCTCC 2 cut(s) 503, 533
Bsc4I CCNNNNNNNGG 3 cut(s) 215, 458, 1095
Bse1I ACTGG 2 cut(s) 1024, 1146
BseAI TCCGGA 1 cut(s) 902
BseBI CCWGG 1 cut(s) 453
BseDI CCNNGG 4 cut(s) 296, 730, 935, 936
BseGI GGATG 3 cut(s) 712, 1162, 1261
BseLI CCNNNNNNNGG 3 cut(s) 215, 458, 1095
BseMII CTCAG 3 cut(s) 190, 255, 816
BseNI ACTGG 2 cut(s) 1024, 1146
BseRI GAGGAG 1 cut(s) 541
BseSI GKGCMC 2 cut(s) 758, 806
BseXI GCAGC 7 cut(s) 58, 106, 430, 452, 571, 782, 830
BshFI GGCC 5 cut(s) 370, 962, 1023, 1037, 1099
BshNI GGYRCC 2 cut(s) 33, 401
BsiHKAI GWGCWC 3 cut(s) 92, 146, 1045
BsiHKCI CYCGRG 1 cut(s) 935
BsiSI CCGG 4 cut(s) 903, 922, 928, 936
BslFI GGGAC 1 cut(s) 1202
BslI CCNNNNNNNGG 3 cut(s) 215, 458, 1095
BsmAI GTCTC 1 cut(s) 131
BsmBI CGTCTC 1 cut(s) 131
BsmFI GGGAC 1 cut(s) 1202
BsmI GAATGC 1 cut(s) 195
BsnI GGCC 5 cut(s) 370, 962, 1023, 1037, 1099
BsoBI CYCGRG 1 cut(s) 935
Bsp1286I GDGCHC 6 cut(s) 92, 146, 221, 758, 806, 1045
Bsp13I TCCGGA 1 cut(s) 902
Bsp143I GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
BspACI CCGC 3 cut(s) 49, 351, 1195
BspANI GGCC 5 cut(s) 370, 962, 1023, 1037, 1099
BspCNI CTCAG 3 cut(s) 189, 256, 817
BspEI TCCGGA 1 cut(s) 902
BspLI GGNNCC 5 cut(s) 35, 403, 926, 1218, 1248
BspMAI CTGCAG 1 cut(s) 1231
BspPI GGATC 3 cut(s) 59, 1079, 1175
BspT107I GGYRCC 2 cut(s) 33, 401
BsrI ACTGG 2 cut(s) 1024, 1146
BssECI CCNNGG 4 cut(s) 296, 730, 935, 936
BssMI GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
BssNI GRCGYC 1 cut(s) 1186
BssSI CACGAG 1 cut(s) 711
BssT1I CCWWGG 1 cut(s) 296
Bst2BI CACGAG 1 cut(s) 711
Bst2UI CCWGG 1 cut(s) 453
Bst4CI ACNGT 3 cut(s) 73, 406, 559
BstACI GRCGYC 1 cut(s) 1186
BstAPI GCANNNNNTGC 1 cut(s) 201
BstC8I GCNNGC 2 cut(s) 78, 206
BstDEI CTNAG 5 cut(s) 176, 264, 825, 949, 1094
BstENI CCTNNNNNAGG 1 cut(s) 456
BstF5I GGATG 3 cut(s) 712, 1162, 1261
BstHHI GCGC 1 cut(s) 112
BstKTI GATC 6 cut(s) 54, 315, 427, 1009, 1087, 1170
BstMAI GTCTC 1 cut(s) 131
BstMBI GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
BstMWI GCNNNNNNNGC 7 cut(s) 116, 201, 581, 590, 707, 1049, 1194
BstNI CCWGG 1 cut(s) 453
BstNSI RCATGY 2 cut(s) 80, 1201
BstSCI CCNGG 3 cut(s) 451, 934, 935
BstSFI CTRYAG 2 cut(s) 837, 1227
BstSLI GKGCMC 2 cut(s) 758, 806
BstV1I GCAGC 7 cut(s) 58, 106, 430, 452, 571, 782, 830
BstX2I RGATCY 3 cut(s) 312, 1084, 1167
BstXI CCANNNNNNTGG 2 cut(s) 552, 1153
BstYI RGATCY 3 cut(s) 312, 1084, 1167
BsuRI GGCC 5 cut(s) 370, 962, 1023, 1037, 1099
BtsCI GGATG 3 cut(s) 712, 1162, 1261
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 3 cut(s) 78, 105, 1153
Cac8I GCNNGC 2 cut(s) 78, 206
CaiI CAGNNNCTG 2 cut(s) 776, 824
CfoI GCGC 1 cut(s) 112
Cfr13I GGNCC 2 cut(s) 960, 1216
Cfr9I CCCGGG 1 cut(s) 935
CseI GACGC 1 cut(s) 1194
Csp6I GTAC 3 cut(s) 34, 402, 456
CviAII CATG 5 cut(s) 77, 751, 799, 1105, 1198
CviQI GTAC 3 cut(s) 34, 402, 456
DdeI CTNAG 5 cut(s) 176, 264, 825, 949, 1094
DpnI GATC 6 cut(s) 53, 314, 426, 1008, 1086, 1169
DpnII GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
DraI TTTAAA 1 cut(s) 640
DraIII CACNNNGTG 1 cut(s) 283
EaeI YGGCCR 1 cut(s) 1035
Ecl136II GAGCTC 1 cut(s) 1043
Eco130I CCWWGG 1 cut(s) 296
Eco24I GRGCYC 2 cut(s) 221, 1045
Eco47I GGWCC 1 cut(s) 1216
Eco53kI GAGCTC 1 cut(s) 1043
Eco57I CTGAAG 2 cut(s) 48, 1121
Eco88I CYCGRG 1 cut(s) 935
EcoICRI GAGCTC 1 cut(s) 1043
EcoNI CCTNNNNNAGG 1 cut(s) 456
EcoRI GAATTC 2 cut(s) 12, 430
EcoRII CCWGG 1 cut(s) 451
EcoT14I CCWWGG 1 cut(s) 296
EcoT38I GRGCYC 2 cut(s) 221, 1045
ErhI CCWWGG 1 cut(s) 296
Esp3I CGTCTC 1 cut(s) 131
FaeI CATG 5 cut(s) 80, 754, 802, 1108, 1201
FalI AAGNNNNNCTT 2 cut(s) 314, 346
FaqI GGGAC 1 cut(s) 1202
FatI CATG 5 cut(s) 76, 750, 798, 1104, 1197
FauNDI CATATG 2 cut(s) 760, 808
FbaI TGATCA 2 cut(s) 424, 1006
Fnu4HI GCNGC 7 cut(s) 47, 120, 441, 444, 585, 771, 819
FokI GGATG 3 cut(s) 719, 1169, 1248
FriOI GRGCYC 2 cut(s) 221, 1045
Fsp4HI GCNGC 7 cut(s) 47, 120, 441, 444, 585, 771, 819
FspBI CTAG 3 cut(s) 252, 297, 596
GlaI GCGC 1 cut(s) 111
GluI GCNGC 7 cut(s) 47, 120, 441, 444, 585, 771, 819
HaeIII GGCC 5 cut(s) 370, 962, 1023, 1037, 1099
HapII CCGG 4 cut(s) 903, 922, 928, 936
HgaI GACGC 1 cut(s) 1194
HhaI GCGC 1 cut(s) 112
Hin1I GRCGYC 1 cut(s) 1186
Hin1II CATG 5 cut(s) 80, 754, 802, 1108, 1201
Hin6I GCGC 1 cut(s) 110
HinP1I GCGC 1 cut(s) 110
HincII GTYRAC 1 cut(s) 1057
HindII GTYRAC 1 cut(s) 1057
HindIII AAGCTT 2 cut(s) 1091, 1133
HinfI GANTC 6 cut(s) 155, 255, 268, 662, 990, 1142
HpaII CCGG 4 cut(s) 903, 922, 928, 936
HphI GGTGA 1 cut(s) 398
Hpy166II GTNNAC 2 cut(s) 555, 1057
Hpy188I TCNGA 4 cut(s) 67, 260, 429, 688
Hpy188III TCNNGA 7 cut(s) 509, 632, 776, 824, 903, 1080, 1139
Hpy8I GTNNAC 2 cut(s) 555, 1057
Hpy99I CGWCG 1 cut(s) 1188
HpyAV CCTTC 2 cut(s) 22, 297
HpyCH4III ACNGT 3 cut(s) 73, 406, 559
HpyCH4IV ACGT 1 cut(s) 496
HpyCH4V TGCA 8 cut(s) 76, 80, 587, 710, 770, 818, 1064, 1229
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 201, 581, 590, 707, 1049, 1194
HpyF3I CTNAG 5 cut(s) 176, 264, 825, 949, 1094
HpySE526I ACGT 1 cut(s) 496
Hsp92I GRCGYC 1 cut(s) 1186
Hsp92II CATG 5 cut(s) 80, 754, 802, 1108, 1201
HspAI GCGC 1 cut(s) 110
Kpn2I TCCGGA 1 cut(s) 902
KpnI GGTACC 2 cut(s) 37, 405
Ksp22I TGATCA 2 cut(s) 424, 1006
Kzo9I GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
LmnI GCTCC 3 cut(s) 778, 826, 878
Lsp1109I GCAGC 7 cut(s) 58, 106, 430, 452, 571, 782, 830
LweI GCATC 1 cut(s) 697
MaeI CTAG 3 cut(s) 252, 297, 596
MaeII ACGT 1 cut(s) 496
MaeIII GTNAC 1 cut(s) 632
MalI GATC 6 cut(s) 53, 314, 426, 1008, 1086, 1169
MboI GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
MboII GAAGA 2 cut(s) 580, 596
MflI RGATCY 3 cut(s) 312, 1084, 1167
MhlI GDGCHC 6 cut(s) 92, 146, 221, 758, 806, 1045
MlsI TGGCCA 1 cut(s) 1037
MluCI AATT 6 cut(s) 12, 100, 430, 462, 999, 1254
MluNI TGGCCA 1 cut(s) 1037
MlyI GAGTC 2 cut(s) 277, 999
MmeI TCCRAC 1 cut(s) 639
MnlI CCTC 9 cut(s) 47, 285, 298, 382, 474, 505, 519, 725, 1004
Mox20I TGGCCA 1 cut(s) 1037
MroI TCCGGA 1 cut(s) 902
MscI TGGCCA 1 cut(s) 1037
MseI TTAA 6 cut(s) 336, 411, 486, 639, 678, 1047
MslI CAYNNNNRTG 3 cut(s) 23, 550, 732
Msp20I TGGCCA 1 cut(s) 1037
MspA1I CMGCKG 2 cut(s) 49, 443
MspI CCGG 4 cut(s) 903, 922, 928, 936
MspR9I CCNGG 3 cut(s) 453, 936, 937
Mva1269I GAATGC 1 cut(s) 195
MvaI CCWGG 1 cut(s) 453
MwoI GCNNNNNNNGC 7 cut(s) 116, 201, 581, 590, 707, 1049, 1194
NciI CCSGG 2 cut(s) 936, 937
NdeI CATATG 2 cut(s) 760, 808
NdeII GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
NlaIII CATG 5 cut(s) 80, 754, 802, 1108, 1201
NlaIV GGNNCC 5 cut(s) 35, 403, 926, 1218, 1248
NmuCI GTSAC 1 cut(s) 632
NspI RCATGY 2 cut(s) 80, 1201
OliI CACNNNNGTG 3 cut(s) 23, 550, 732
PaeI GCATGC 1 cut(s) 80
PctI GAATGC 1 cut(s) 195
PfeI GAWTC 4 cut(s) 155, 255, 662, 1142
PkrI GCNGC 7 cut(s) 48, 121, 442, 445, 586, 772, 820
PleI GAGTC 2 cut(s) 276, 998
PpsI GAGTC 2 cut(s) 276, 998
Psp124BI GAGCTC 1 cut(s) 1045
Psp6I CCWGG 1 cut(s) 451
PspGI CCWGG 1 cut(s) 451
PspN4I GGNNCC 5 cut(s) 35, 403, 926, 1218, 1248
PspPI GGNCC 2 cut(s) 960, 1216
PstI CTGCAG 1 cut(s) 1231
PstNI CAGNNNCTG 2 cut(s) 776, 824
PsuI RGATCY 3 cut(s) 312, 1084, 1167
PvuII CAGCTG 1 cut(s) 443
RsaI GTAC 3 cut(s) 35, 403, 457
RsaNI GTAC 3 cut(s) 34, 402, 456
RseI CAYNNNNRTG 3 cut(s) 23, 550, 732
SacI GAGCTC 1 cut(s) 1045
SaqAI TTAA 6 cut(s) 336, 411, 486, 639, 678, 1047
SatI GCNGC 7 cut(s) 47, 120, 441, 444, 585, 771, 819
Sau3AI GATC 6 cut(s) 51, 312, 424, 1006, 1084, 1167
Sau96I GGNCC 2 cut(s) 960, 1216
SchI GAGTC 2 cut(s) 277, 999
ScrFI CCNGG 3 cut(s) 453, 936, 937
SduI GDGCHC 6 cut(s) 92, 146, 221, 758, 806, 1045
SfaNI GCATC 1 cut(s) 697
SfcI CTRYAG 2 cut(s) 837, 1227
SinI GGWCC 1 cut(s) 1216
SmaI CCCGGG 1 cut(s) 937
SmiMI CAYNNNNRTG 3 cut(s) 23, 550, 732
SphI GCATGC 1 cut(s) 80
Sse9I AATT 6 cut(s) 12, 100, 430, 462, 999, 1254
SsiI CCGC 3 cut(s) 49, 351, 1195
SspI AATATT 1 cut(s) 1125
SspMI CTAG 3 cut(s) 252, 297, 596
SstI GAGCTC 1 cut(s) 1045
StyD4I CCNGG 3 cut(s) 451, 934, 935
StyI CCWWGG 1 cut(s) 296
TaaI ACNGT 3 cut(s) 73, 406, 559
TaiI ACGT 1 cut(s) 499
TaqI TCGA 1 cut(s) 891
TasI AATT 6 cut(s) 12, 100, 430, 462, 999, 1254
TfiI GAWTC 4 cut(s) 155, 255, 662, 1142
Tru1I TTAA 6 cut(s) 336, 411, 486, 639, 678, 1047
Tru9I TTAA 6 cut(s) 336, 411, 486, 639, 678, 1047
TscAI CASTG 3 cut(s) 78, 112, 1153
TseFI GTSAC 1 cut(s) 632
TseI GCWGC 7 cut(s) 46, 119, 440, 443, 584, 770, 818
Tsp45I GTSAC 1 cut(s) 632
TspDTI ATGAA 6 cut(s) 147, 354, 423, 581, 627, 1121
TspGWI ACGGA 1 cut(s) 161
TspMI CCCGGG 1 cut(s) 935
TspRI CASTG 3 cut(s) 78, 112, 1153
VpaK11BI GGWCC 1 cut(s) 1216
XagI CCTNNNNNAGG 1 cut(s) 456
XapI RAATTY 4 cut(s) 12, 100, 430, 999
XceI RCATGY 2 cut(s) 80, 1201
XmaI CCCGGG 1 cut(s) 935
XmaJI CCTAGG 1 cut(s) 296
XspI CTAG 3 cut(s) 252, 297, 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.