Rw5G018800
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000305
Physical Location & Seq
Reverse (-)
24252752 .. 24260062
7311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G018800.1

Sequence Viewer

Length: 1374 bp
ATGAGTGGAGGGATTCGGACAAGCGTGAAGGGGTACCTTTTAGCACAACGCCTCACTTTGGCCTTGGACCCATTGTTGGAAAATGAGAACATCAACAACAATGTCACAGCTCCCCTAGATCCACCTCCACATCCAGTTGAGGACAGTCAGGAGACAACAATGGATTCAACTACATATGGGCTCGGTATCTGTGACGGTAACATTCCTTGCTTCCCAATGTTGAACCCTGCAAAGAGCATGGCTTCATACAGGACTAGAACCAGAGCTGAGAGGCCCCCTCCCCAAGGTTCTTTGGCACTTCAATATTTTCAGTTGTACTATATGTTAAAACCACGTACCAGGAACTTTCGTCCTGGTAGTATTCTGGGTGAAAGAGGTTTTTCTTCTTTCTTTAAGGGGTGGATCGATCAGCAATCGGTCACAGCTGCCAAGCCCGGTACCGGCATGGCCGTTGCAATAAAGAGGCTTAACCAACAAGGCACCCTGCAGAGTCACAAGGAATGGATGGAAGAAGTTAACTGCCTTGGACAGCTGAGTCACCCAAATCTTGTAAAACTTATTGGTTACTGCCTAGAGGATGACGAGCGGCTTCTGGTGTCTGAATTTGTGCCTAATGGCAGTTTGGAAAATCATATTTTTAGAAGGGGCCCGTCCTGCTTTCCATGGAACCTGCGCATGAAGATTGCACTCGGTGCTGCTAAGGCTCTAGCATTTCTTCATAGTGATGAGGCAAAATGCATATATGTGGACTTTGAGACATCTAAGATCCTTCTTGATTCAAACTATAATGTCAAAATATATGGTTATGGTTTAGCCCAGGAAGGGCCTGAAGGTTATAGAACCCGTCCCTTCCCTCTCTTTGGTATGATGGATCACGACGTGAACTTGCCCGTCCCTTCCCTCTCTTTTTGCCCGGGCCTTTTAGAGCTCCTGAGTCATTTAACCCGCAAGACTGACGTGTATGGTTTTGGAGTTGTTATGCTCGAATTGTTGACTGGAAAACCAGTTCTTGACACTAGCCGGCCAACCAGGGAACGCAATTTAGTCGAATGGGCCAGACCTTACTTTGCTAGCAAACGCAGAGTTCTTAAAATTTTTGATGCTCGTATTAAAGGCCAGTATTCTGTGGCTGCAGCTCGTAAAGCAGCTAACCTTACAAATCAATGCTTATCAACAGAACCCGAGTTGAGGCCAAACATGAATGAGGTGGTAAAAGCGTTGGAGCAGCTTCAGGAATCTGGTAACAATGAGGGTTCAGGAATCTCTCACAACGAGCCTCGCCAATCTCCTTATTCCAATTCAAACAGTGCCAAATCAAGCTGGAGAAGCTGGATCAGCTTCAGGTCATCTTCTTCCCACAGCTACATAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0035821 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0060089 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0075136 GO:0080134 GO:0098542 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

457

Amino Acids

51.23

Weight (kDa)

8.96

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 121 - 407 2.2e-31 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 143 - 405 7.4e-29 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39660 AT3G55450 AT3G55450
fragaria_vesca FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22540 FvH4_7g22550 FvH4_7g22550 FvH4_7g22590 FvH4_7g22592 FvH4_7g22592 FvH4_7g22593 FvH4_7g22593 FvH4_7g22593
malus_domestica MD01G1134700.v1.1 MD07G1199400.v1.1
prunus_persica Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1 Prupe.2G236100_v2.0.a1
pyrus_communis pycom01g15540 pycom07g18630
rosa_chinensis RchiOBHm_Chr1g0367221 RchiOBHm_Chr1g0367231 RchiOBHm_Chr1g0367251 RchiOBHm_Chr1g0367261 RchiOBHm_Chr1g0367311 RchiOBHm_Chr1g0367321 RchiOBHm_Chr1g0367351 RchiOBHm_Chr1g0367401 RchiOBHm_Chr1g0367411 RchiOBHm_Chr1g0367581 RchiOBHm_Chr5g0029531
rosa_laevigata RLG00000001400 RLG00000024338 RLG00000027271 RLG00000027274 RLG00000027277 RLG00000027278 RLG00000027280 RLG00000027281 RLG00000027282 RLG00000027285 RLG00000027286 RLG00000027288 RLG00000033176
rosa_multiflora Rmu_sc0002690.1_g000002 Rmu_sc0004181.1_g000007 Rmu_sc0008470.1_g000013 Rmu_sc0008470.1_g000015 Rmu_sc0009775.1_g000001 Rmu_sc0009775.1_g000003 Rmu_sc0009775.1_g000004 Rmu_sc0009775.1_g000005 Rmu_sc0011000.1_g000008 Rmu_sc0014291.1_g000001 Rmu_sc0014291.1_g000005 Rmu_sc0014291.1_g000008
rosa_roxburghii Rroxscaffold_1G00050440 Rroxscaffold_4G00289340 Rroxscaffold_4G00289350 Rroxscaffold_4G00289380 Rroxscaffold_4G00289400 Rroxscaffold_4G00289410 Rroxscaffold_4G00289450 Rroxscaffold_4G00289490 Rroxscaffold_4G00289500 Rroxscaffold_4G00289510 Rroxscaffold_6G00420130 Rroxscaffold_6G00421370
rosa_rugosa Rorug01G0335600.1 Rorug01G0335700 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335800 Rorug01G0335900 Rorug01G0335900 Rorug01G0336000 Rorug01G0336000 Rorug05G0114700 Rorug05G0114800
rosa_samantha Rh1AG342300 Rh1AG342500 Rh1AG342700 Rh1BG302700 Rh1BG303000 Rh1BG303100 Rh1BG303400 Rh1BG303500 Rh1BG303800 Rh1BG304100 Rh1CG319200 Rh1CG319400 Rh1CG319800 Rh1CG319900 Rh1DG335300 Rh1DG335500 Rh1DG335900 Rh1DG336200 Rh2AG106400 Rh3DG307700 Rh4CG281300 Rh5AG206700 Rh5CG227400 Rh5DG209100 Rh7CG338300
rosa_wichuraiana Rw1G030420 Rw1G030430 Rw1G030460 Rw1G030470 Rw1G030480 Rw1G030510 Rw1G030520 Rw5G018800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 534
Acc16I TGCGCA 1 cut(s) 674
Acc36I ACCTGC 1 cut(s) 678
Acc65I GGTACC 2 cut(s) 33, 437
AccB1I GGYRCC 3 cut(s) 33, 437, 479
AccBSI CCGCTC 1 cut(s) 586
AciI CCGC 2 cut(s) 586, 946
AclWI GGATC 5 cut(s) 113, 410, 760, 879, 1340
AcoI YGGCCR 2 cut(s) 447, 1022
AcsI RAATTY 2 cut(s) 602, 1092
AcuI CTGAAG 3 cut(s) 849, 1214, 1324
AdeI CACNNNGTG 2 cut(s) 692, 880
AfaI GTAC 4 cut(s) 35, 317, 337, 439
AfiI CCNNNNNNNGG 7 cut(s) 58, 76, 284, 440, 822, 860, 1188
AflIII ACRYGT 1 cut(s) 957
AgsI TTSAA 5 cut(s) 168, 223, 302, 780, 1302
AjiI CACGTC 2 cut(s) 880, 958
AjnI CCWGG 4 cut(s) 338, 352, 816, 1028
AloI GAACNNNNNNTCC 2 cut(s) 990, 1022
Alw21I GWGCWC 1 cut(s) 930
Alw26I GTCTC 2 cut(s) 146, 749
AlwI GGATC 5 cut(s) 113, 410, 760, 879, 1340
Ama87I CYCGRG 2 cut(s) 913, 1181
ApaI GGGCCC 1 cut(s) 650
ApeKI GCWGC 6 cut(s) 425, 695, 1130, 1133, 1145, 1225
ApoI RAATTY 2 cut(s) 602, 1092
Asp718I GGTACC 2 cut(s) 33, 437
AspLEI GCGC 1 cut(s) 675
AspS9I GGNCC 7 cut(s) 67, 273, 646, 647, 824, 916, 1053
AsuC2I CCSGG 3 cut(s) 435, 914, 915
AsuHPI GGTGA 2 cut(s) 380, 530
AsuNHI GCTAGC 1 cut(s) 1070
AvaI CYCGRG 2 cut(s) 913, 1181
AvaII GGWCC 1 cut(s) 67
BaeGI GKGCMC 1 cut(s) 650
BanI GGYRCC 3 cut(s) 33, 437, 479
BanII GRGCYC 3 cut(s) 183, 650, 930
Bbv12I GWGCWC 1 cut(s) 930
BbvI GCAGC 6 cut(s) 412, 682, 1117, 1145, 1157, 1237
BccI CCATC 2 cut(s) 499, 862
BceAI ACGGC 1 cut(s) 434
BcgI CGANNNNNNTGC 2 cut(s) 1027, 1061
BciT130I CCWGG 4 cut(s) 340, 354, 818, 1030
BcnI CCSGG 3 cut(s) 435, 914, 915
BcoDI GTCTC 2 cut(s) 146, 749
BfaI CTAG 6 cut(s) 116, 255, 572, 707, 1017, 1071
BfmI CTRYAG 2 cut(s) 485, 1131
BfuAI ACCTGC 1 cut(s) 678
BisI GCNGC 7 cut(s) 426, 587, 696, 1131, 1134, 1146, 1226
BlsI GCNGC 7 cut(s) 427, 588, 697, 1132, 1135, 1147, 1227
Bme1390I CCNGG 7 cut(s) 340, 354, 435, 818, 914, 915, 1030
Bme18I GGWCC 1 cut(s) 67
BmeT110I CYCGRG 2 cut(s) 913, 1181
BmgBI CACGTC 2 cut(s) 880, 958
BmgT120I GGNCC 7 cut(s) 67, 273, 646, 647, 824, 916, 1053
BmiI GGNNCC 8 cut(s) 35, 69, 275, 439, 481, 647, 648, 668
BmrFI CCNGG 7 cut(s) 340, 354, 435, 818, 914, 915, 1030
BmsI GCATC 1 cut(s) 1090
BmtI GCTAGC 1 cut(s) 1074
BplI GAGNNNNNCTC 2 cut(s) 262, 294
BpmI CTGGAG 1 cut(s) 1342
Bpu10I CCTNAGC 1 cut(s) 699
BpuMI CCSGG 3 cut(s) 435, 914, 915
Bsa29I ATCGAT 1 cut(s) 405
BsaAI YACGTR 1 cut(s) 335
BsaJI CCNNGG 7 cut(s) 63, 283, 523, 662, 816, 913, 1029
Bsc4I CCNNNNNNNGG 7 cut(s) 58, 76, 284, 440, 822, 860, 1188
Bse118I RCCGGY 2 cut(s) 440, 1020
Bse1I ACTGG 4 cut(s) 134, 1000, 1004, 1117
BseBI CCWGG 4 cut(s) 340, 354, 818, 1030
BseCI ATCGAT 1 cut(s) 405
BseDI CCNNGG 7 cut(s) 63, 283, 523, 662, 816, 913, 1029
BseGI GGATG 3 cut(s) 130, 510, 583
BseLI CCNNNNNNNGG 7 cut(s) 58, 76, 284, 440, 822, 860, 1188
BseMII CTCAG 3 cut(s) 258, 524, 923
BseNI ACTGG 4 cut(s) 134, 1000, 1004, 1117
BseSI GKGCMC 1 cut(s) 650
BseXI GCAGC 6 cut(s) 412, 682, 1117, 1145, 1157, 1237
BshNI GGYRCC 3 cut(s) 33, 437, 479
BshVI ATCGAT 1 cut(s) 405
BsiHKAI GWGCWC 1 cut(s) 930
BsiHKCI CYCGRG 2 cut(s) 913, 1181
BsiSI CCGG 4 cut(s) 435, 441, 914, 1021
BslFI GGGAC 2 cut(s) 831, 878
BslI CCNNNNNNNGG 7 cut(s) 58, 76, 284, 440, 822, 860, 1188
BsmAI GTCTC 2 cut(s) 146, 749
BsmFI GGGAC 2 cut(s) 831, 878
BsoBI CYCGRG 2 cut(s) 913, 1181
Bsp120I GGGCCC 1 cut(s) 646
Bsp1286I GDGCHC 3 cut(s) 183, 650, 930
Bsp143I GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
Bsp19I CCATGG 1 cut(s) 662
BspACI CCGC 2 cut(s) 586, 946
BspCNI CTCAG 3 cut(s) 259, 525, 924
BspDI ATCGAT 1 cut(s) 405
BspLI GGNNCC 8 cut(s) 35, 69, 275, 439, 481, 647, 648, 668
BspMAI CTGCAG 2 cut(s) 489, 1135
BspMI ACCTGC 1 cut(s) 678
BspOI GCTAGC 1 cut(s) 1074
BspPI GGATC 5 cut(s) 113, 410, 760, 879, 1340
BspT107I GGYRCC 3 cut(s) 33, 437, 479
BsrBI CCGCTC 1 cut(s) 586
BsrFI RCCGGY 2 cut(s) 440, 1020
BsrI ACTGG 4 cut(s) 134, 1000, 1004, 1117
BssAI RCCGGY 2 cut(s) 440, 1020
BssECI CCNNGG 7 cut(s) 63, 283, 523, 662, 816, 913, 1029
BssMI GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
BssT1I CCWWGG 4 cut(s) 63, 283, 523, 662
Bst2UI CCWGG 4 cut(s) 340, 354, 818, 1030
Bst4CI ACNGT 3 cut(s) 146, 197, 1307
BstAPI GCANNNNNTGC 1 cut(s) 692
BstBAI YACGTR 1 cut(s) 335
BstC8I GCNNGC 2 cut(s) 1022, 1072
BstDEI CTNAG 5 cut(s) 267, 533, 699, 762, 932
BstDSI CCRYGG 1 cut(s) 662
BstENI CCTNNNNNAGG 1 cut(s) 282
BstF5I GGATG 3 cut(s) 130, 510, 583
BstHHI GCGC 1 cut(s) 675
BstKTI GATC 6 cut(s) 121, 405, 409, 768, 874, 1335
BstMAI GTCTC 2 cut(s) 146, 749
BstMBI GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
BstMWI GCNNNNNNNGC 6 cut(s) 654, 692, 701, 1142, 1326, 1335
BstNI CCWGG 4 cut(s) 340, 354, 818, 1030
BstSCI CCNGG 7 cut(s) 338, 352, 433, 816, 912, 913, 1028
BstSFI CTRYAG 2 cut(s) 485, 1131
BstSLI GKGCMC 1 cut(s) 650
BstV1I GCAGC 6 cut(s) 412, 682, 1117, 1145, 1157, 1237
BstX2I RGATCY 2 cut(s) 118, 765
BstYI RGATCY 2 cut(s) 118, 765
Bsu15I ATCGAT 1 cut(s) 405
BsuTUI ATCGAT 1 cut(s) 405
BtgI CCRYGG 1 cut(s) 662
BtrI CACGTC 2 cut(s) 880, 958
BtsCI GGATG 3 cut(s) 130, 510, 583
BtsIMutI CAGTG 1 cut(s) 1312
BveI ACCTGC 1 cut(s) 678
Cac8I GCNNGC 2 cut(s) 1022, 1072
CfoI GCGC 1 cut(s) 675
Cfr10I RCCGGY 2 cut(s) 440, 1020
Cfr13I GGNCC 7 cut(s) 67, 273, 646, 647, 824, 916, 1053
Cfr9I CCCGGG 1 cut(s) 913
ClaI ATCGAT 1 cut(s) 405
Csp6I GTAC 4 cut(s) 34, 316, 336, 438
CviAII CATG 5 cut(s) 238, 445, 663, 676, 1198
CviQI GTAC 4 cut(s) 34, 316, 336, 438
DdeI CTNAG 5 cut(s) 267, 533, 699, 762, 932
DpnI GATC 6 cut(s) 120, 404, 408, 767, 873, 1334
DpnII GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
DraIII CACNNNGTG 2 cut(s) 692, 880
DrdI GACNNNNNNGTC 1 cut(s) 534
DseDI GACNNNNNNGTC 1 cut(s) 534
EaeI YGGCCR 2 cut(s) 447, 1022
Ecl136II GAGCTC 1 cut(s) 928
Eco130I CCWWGG 4 cut(s) 63, 283, 523, 662
Eco24I GRGCYC 3 cut(s) 183, 650, 930
Eco47I GGWCC 1 cut(s) 67
Eco53kI GAGCTC 1 cut(s) 928
Eco57I CTGAAG 3 cut(s) 849, 1214, 1324
Eco88I CYCGRG 2 cut(s) 913, 1181
EcoICRI GAGCTC 1 cut(s) 928
EcoNI CCTNNNNNAGG 1 cut(s) 282
EcoO109I RGGNCCY 3 cut(s) 273, 646, 824
EcoRII CCWGG 4 cut(s) 338, 352, 816, 1028
EcoT14I CCWWGG 4 cut(s) 63, 283, 523, 662
EcoT22I ATGCAT 1 cut(s) 740
EcoT38I GRGCYC 3 cut(s) 183, 650, 930
ErhI CCWWGG 4 cut(s) 63, 283, 523, 662
FaeI CATG 5 cut(s) 241, 448, 666, 679, 1201
FaqI GGGAC 2 cut(s) 831, 878
FatI CATG 5 cut(s) 237, 444, 662, 675, 1197
FauI CCCGC 1 cut(s) 953
FauNDI CATATG 1 cut(s) 175
Fnu4HI GCNGC 7 cut(s) 426, 587, 696, 1131, 1134, 1146, 1226
FokI GGATG 3 cut(s) 117, 517, 590
FriOI GRGCYC 3 cut(s) 183, 650, 930
Fsp4HI GCNGC 7 cut(s) 426, 587, 696, 1131, 1134, 1146, 1226
FspBI CTAG 6 cut(s) 116, 255, 572, 707, 1017, 1071
FspI TGCGCA 1 cut(s) 674
GlaI GCGC 1 cut(s) 674
GluI GCNGC 7 cut(s) 426, 587, 696, 1131, 1134, 1146, 1226
GsuI CTGGAG 1 cut(s) 1342
HapII CCGG 4 cut(s) 435, 441, 914, 1021
HhaI GCGC 1 cut(s) 675
Hin1II CATG 5 cut(s) 241, 448, 666, 679, 1201
Hin6I GCGC 1 cut(s) 673
HinP1I GCGC 1 cut(s) 673
HincII GTYRAC 2 cut(s) 517, 993
HindII GTYRAC 2 cut(s) 517, 993
HinfI GANTC 8 cut(s) 13, 164, 490, 535, 776, 934, 1235, 1260
HpaI GTTAAC 1 cut(s) 517
HpaII CCGG 4 cut(s) 435, 441, 914, 1021
HphI GGTGA 2 cut(s) 380, 530
Hpy166II GTNNAC 4 cut(s) 517, 748, 883, 993
Hpy188I TCNGA 2 cut(s) 18, 601
Hpy188III TCNNGA 7 cut(s) 149, 773, 875, 931, 1010, 1232, 1257
Hpy8I GTNNAC 4 cut(s) 517, 748, 883, 993
Hpy99I CGWCG 1 cut(s) 881
HpyAV CCTTC 7 cut(s) 22, 636, 779, 815, 824, 859, 906
HpyCH4III ACNGT 3 cut(s) 146, 197, 1307
HpyCH4IV ACGT 3 cut(s) 334, 879, 957
HpyCH4V TGCA 6 cut(s) 230, 455, 487, 686, 738, 1133
HpyF10VI GCNNNNNNNGC 6 cut(s) 654, 692, 701, 1142, 1326, 1335
HpyF3I CTNAG 5 cut(s) 267, 533, 699, 762, 932
HpySE526I ACGT 3 cut(s) 334, 879, 957
Hsp92II CATG 5 cut(s) 241, 448, 666, 679, 1201
HspAI GCGC 1 cut(s) 673
KpnI GGTACC 2 cut(s) 37, 441
KroI GCCGGC 1 cut(s) 1020
KroNI GCCGGC 1 cut(s) 1022
KspAI GTTAAC 1 cut(s) 517
Kzo9I GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
LmnI GCTCC 3 cut(s) 115, 933, 1222
Lsp1109I GCAGC 6 cut(s) 412, 682, 1117, 1145, 1157, 1237
LweI GCATC 1 cut(s) 1090
MaeI CTAG 6 cut(s) 116, 255, 572, 707, 1017, 1071
MaeII ACGT 3 cut(s) 334, 879, 957
MaeIII GTNAC 8 cut(s) 103, 191, 197, 418, 491, 536, 563, 1241
MalI GATC 6 cut(s) 120, 404, 408, 767, 873, 1334
MbiI CCGCTC 1 cut(s) 586
MboI GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
MboII GAAGA 6 cut(s) 375, 521, 691, 707, 1341, 1344
MflI RGATCY 2 cut(s) 118, 765
MhlI GDGCHC 3 cut(s) 183, 650, 930
MluCI AATT 5 cut(s) 602, 986, 1039, 1092, 1297
MlyI GAGTC 3 cut(s) 499, 544, 943
MmeI TCCRAC 2 cut(s) 57, 1200
Mph1103I ATGCAT 1 cut(s) 740
MroNI GCCGGC 1 cut(s) 1020
MseI TTAA 7 cut(s) 326, 393, 468, 516, 941, 1089, 1110
MslI CAYNNNNRTG 2 cut(s) 723, 743
MspA1I CMGCKG 2 cut(s) 425, 532
MspI CCGG 4 cut(s) 435, 441, 914, 1021
MspR9I CCNGG 7 cut(s) 340, 354, 435, 818, 914, 915, 1030
MvaI CCWGG 4 cut(s) 340, 354, 818, 1030
MwoI GCNNNNNNNGC 6 cut(s) 654, 692, 701, 1142, 1326, 1335
NaeI GCCGGC 1 cut(s) 1022
NciI CCSGG 3 cut(s) 435, 914, 915
NcoI CCATGG 1 cut(s) 662
NdeI CATATG 1 cut(s) 175
NdeII GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
NgoMIV GCCGGC 1 cut(s) 1020
NheI GCTAGC 1 cut(s) 1070
NlaIII CATG 5 cut(s) 241, 448, 666, 679, 1201
NlaIV GGNNCC 8 cut(s) 35, 69, 275, 439, 481, 647, 648, 668
NmuCI GTSAC 5 cut(s) 103, 191, 418, 491, 536
NsbI TGCGCA 1 cut(s) 674
NsiI ATGCAT 1 cut(s) 740
PdiI GCCGGC 1 cut(s) 1022
PfeI GAWTC 5 cut(s) 13, 164, 776, 1235, 1260
PkrI GCNGC 7 cut(s) 427, 588, 697, 1132, 1135, 1147, 1227
PleI GAGTC 3 cut(s) 498, 543, 942
PpsI GAGTC 3 cut(s) 498, 543, 942
Ppu21I YACGTR 1 cut(s) 335
Psp124BI GAGCTC 1 cut(s) 930
Psp6I CCWGG 4 cut(s) 338, 352, 816, 1028
PspGI CCWGG 4 cut(s) 338, 352, 816, 1028
PspN4I GGNNCC 8 cut(s) 35, 69, 275, 439, 481, 647, 648, 668
PspOMI GGGCCC 1 cut(s) 646
PspPI GGNCC 7 cut(s) 67, 273, 646, 647, 824, 916, 1053
PstI CTGCAG 2 cut(s) 489, 1135
PsuI RGATCY 2 cut(s) 118, 765
PvuII CAGCTG 2 cut(s) 425, 532
RsaI GTAC 4 cut(s) 35, 317, 337, 439
RsaNI GTAC 4 cut(s) 34, 316, 336, 438
RseI CAYNNNNRTG 2 cut(s) 723, 743
SacI GAGCTC 1 cut(s) 930
SaqAI TTAA 7 cut(s) 326, 393, 468, 516, 941, 1089, 1110
SatI GCNGC 7 cut(s) 426, 587, 696, 1131, 1134, 1146, 1226
Sau3AI GATC 6 cut(s) 118, 402, 406, 765, 871, 1332
Sau96I GGNCC 7 cut(s) 67, 273, 646, 647, 824, 916, 1053
SchI GAGTC 3 cut(s) 499, 544, 943
ScrFI CCNGG 7 cut(s) 340, 354, 435, 818, 914, 915, 1030
SduI GDGCHC 3 cut(s) 183, 650, 930
SfaNI GCATC 1 cut(s) 1090
SfcI CTRYAG 2 cut(s) 485, 1131
SinI GGWCC 1 cut(s) 67
SmaI CCCGGG 1 cut(s) 915
SmiMI CAYNNNNRTG 2 cut(s) 723, 743
SrfI GCCCGGGC 1 cut(s) 915
Sse9I AATT 5 cut(s) 602, 986, 1039, 1092, 1297
SsiI CCGC 2 cut(s) 586, 946
SspI AATATT 1 cut(s) 305
SspMI CTAG 6 cut(s) 116, 255, 572, 707, 1017, 1071
SstI GAGCTC 1 cut(s) 930
StyD4I CCNGG 7 cut(s) 338, 352, 433, 816, 912, 913, 1028
StyI CCWWGG 4 cut(s) 63, 283, 523, 662
TaaI ACNGT 3 cut(s) 146, 197, 1307
TaiI ACGT 3 cut(s) 337, 882, 960
TaqI TCGA 3 cut(s) 405, 984, 1047
TaqII GACCGA 1 cut(s) 406
TasI AATT 5 cut(s) 602, 986, 1039, 1092, 1297
TatI WGTACW 1 cut(s) 315
TauI GCSGC 1 cut(s) 589
TfiI GAWTC 5 cut(s) 13, 164, 776, 1235, 1260
Tru1I TTAA 7 cut(s) 326, 393, 468, 516, 941, 1089, 1110
Tru9I TTAA 7 cut(s) 326, 393, 468, 516, 941, 1089, 1110
TscAI CASTG 1 cut(s) 1312
TseFI GTSAC 5 cut(s) 103, 191, 418, 491, 536
TseI GCWGC 6 cut(s) 425, 695, 1130, 1133, 1145, 1225
Tsp45I GTSAC 5 cut(s) 103, 191, 418, 491, 536
TspDTI ATGAA 4 cut(s) 234, 692, 707, 1214
TspMI CCCGGG 1 cut(s) 913
TspRI CASTG 1 cut(s) 1312
VpaK11BI GGWCC 1 cut(s) 67
XagI CCTNNNNNAGG 1 cut(s) 282
XapI RAATTY 2 cut(s) 602, 1092
XmaI CCCGGG 1 cut(s) 913
XspI CTAG 6 cut(s) 116, 255, 572, 707, 1017, 1071
Zsp2I ATGCAT 1 cut(s) 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.