pycom13g09170

D-cysteine desulfhydrase 2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
6142255 .. 6145266
3012 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g09170.5

Sequence Viewer

Length: 1314 bp
ATGACATCGCCCATGGAGCTCCTCCTGTTCATCATCCCCTTCCAATTATCTGCTGGTGTGATGAGGATGAAAGTTGAATGCTTTACCAGTAAGAGCGCGATTTCGGCAGCAATTAACCGCGGCTTTCACTCCGGCGTCGTTTCGAAAGGCCGTCGGATTCAGTGTGTTTCCAATTTGAACTTGAGCGGTGGAGATTTTGTGTCAAAATTGCTTGATAGAAGATGGGCATTGCCTGCCCCTGATGCCAAAATTCACCAAATAGTGTTTTCTAGCAACAAAGTAGCAGAGCCAGGCAAAGCCTTGTCTGATGTTTCCTTCTCCAACAATACCAACCCATCTTTTATGATGAGCAAGAATGATCAAGAACCTTCTTTTTTTGTTGTGAGGGATGATTTGTTGCATCCGTTGATAAATGCTGTTTCATGTTCAGAGAGAGGACTTAAACCACACTTGCTTCTACGAGGGGAGCAGCCAGAAATACTGACCGGCTATAACTTGATTTCAACAATGTATGGAAGTGTCATGTATGTTCCGAGATCTCTGTATGCCAACAGGGAAAAGATGCTAAAGAGCCATGCTGATGATTTGGCAGGCAGTAGTAGTAGTGTCGTATGGTTCGATGATATTTTGGAGGCTTCTTTGAGAGAAGATGATGGTTCTCAGAATTTTTTGCAAAAGGATGCTTGGAAGAGTGACCGTCCTTGTAAAATTGCAATCGTTAACGAAGGTGCAGGAGATGTTGTAGCATTACTAGGTCTGATTCGCCTAGTGCAGTACTTATCCCAGAATCACTTACTTGGGAAAGAGAGGCCCTTGAAGTTTGTTGTAGATTCTGGAACTGGGACAACTGCTGTTGGTTTAGCACTTGGAGCCATATGTTTGGGGCTTCCATGGGAGGTAACCGCAGTGATGCTGGCTGGTACAGTTGACGGGTATAGACATCAGGAGAAGCGCTTGATTTCCGATTTCAAGAGGCATTTTGGTTCCCAAATTGACAGCTGCTTCGATGAAATGGATAGAGGAATCGTGCACTGGGTAGAACGTCTACATCCAAGAAAGTTTGGCAATGTTTTAGAAGGGGAAGTAGAGGCATGCCAACACATTGCAAAACAAACCGGTATTTTGGTGGATCCAGTGTATACACTCGCTGCGTGGGAGATGGCAACGATCCTTCGTGAACAGGAAGCAGAAGGAGGTGCAACGGTGGTGATGATTCACACTGGAGGCACTCTAGGCTTGTTTGGATTAGCACAGAGGTACAGATCCTACTTCTCTAACCTCAAAACTGGACCGTCCAAGTCGAGAGAGAGTTGA

Protein Analysis

438

Amino Acids

48.18

Weight (kDa)

7.19

Isoelectric Point (pI)

34.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 186
AccI GTMKAC 2 cut(s) 1045, 1139
AccII CGCG 2 cut(s) 98, 120
AciI CCGC 4 cut(s) 118, 120, 186, 903
AclWI GGATC 4 cut(s) 1124, 1137, 1162, 1257
AcsI RAATTY 2 cut(s) 249, 664
AcyI GRCGYC 1 cut(s) 135
AfaI GTAC 3 cut(s) 776, 922, 1259
AfeI AGCGCT 1 cut(s) 953
AgeI ACCGGT 1 cut(s) 1115
AgsI TTSAA 5 cut(s) 77, 178, 504, 817, 970
AjnI CCWGG 1 cut(s) 289
AluBI AGCT 2 cut(s) 19, 999
AluI AGCT 2 cut(s) 19, 999
Alw21I GWGCWC 2 cut(s) 21, 1032
Alw44I GTGCAC 1 cut(s) 1028
AlwI GGATC 4 cut(s) 1124, 1137, 1162, 1257
Aor51HI AGCGCT 1 cut(s) 953
AoxI GGCC 2 cut(s) 148, 809
ApaLI GTGCAC 1 cut(s) 1028
ApeKI GCWGC 4 cut(s) 107, 469, 999, 1148
ApoI RAATTY 2 cut(s) 249, 664
ArsI GACNNNNNNTTYG 2 cut(s) 986, 1018
AsiGI ACCGGT 1 cut(s) 1115
AspLEI GCGC 2 cut(s) 98, 954
AspS9I GGNCC 2 cut(s) 810, 1289
AsuHPI GGTGA 2 cut(s) 245, 1219
AsuII TTCGAA 1 cut(s) 143
AvaII GGWCC 1 cut(s) 1289
BaeGI GKGCMC 1 cut(s) 1032
BamHI GGATCC 1 cut(s) 1129
BanII GRGCYC 1 cut(s) 21
Bbv12I GWGCWC 2 cut(s) 21, 1032
BbvI GCAGC 4 cut(s) 119, 481, 986, 1135
BccI CCATC 4 cut(s) 216, 343, 647, 1153
BceAI ACGGC 1 cut(s) 135
BciT130I CCWGG 1 cut(s) 291
BclI TGATCA 1 cut(s) 358
BfaI CTAG 4 cut(s) 270, 752, 767, 1232
BfoI RGCGCY 1 cut(s) 955
BglII AGATCT 1 cut(s) 536
BisI GCNGC 5 cut(s) 108, 121, 470, 1000, 1149
BlsI GCNGC 5 cut(s) 109, 122, 471, 1001, 1150
BmcAI AGTACT 1 cut(s) 776
Bme1390I CCNGG 1 cut(s) 291
Bme18I GGWCC 1 cut(s) 1289
BmgT120I GGNCC 2 cut(s) 810, 1289
BmiI GGNNCC 3 cut(s) 871, 985, 1131
BmrFI CCNGG 1 cut(s) 291
BmrI ACTGGG 2 cut(s) 849, 1042
BmsI GCATC 5 cut(s) 232, 409, 552, 670, 900
BmuI ACTGGG 2 cut(s) 849, 1042
BpmI CTGGAG 1 cut(s) 1242
Bpu14I TTCGAA 1 cut(s) 143
BpuEI CTTGAG 1 cut(s) 202
BsaHI GRCGYC 1 cut(s) 135
BsaJI CCNNGG 3 cut(s) 12, 118, 890
BsaWI WCCGGW 1 cut(s) 1115
BsaXI ACNNNNNCTCC 4 cut(s) 183, 213, 726, 756
Bse118I RCCGGY 2 cut(s) 485, 1115
Bse1I ACTGG 6 cut(s) 87, 844, 1037, 1133, 1225, 1291
Bse3DI GCAATG 3 cut(s) 227, 1072, 1101
BseBI CCWGG 1 cut(s) 291
BseDI CCNNGG 3 cut(s) 12, 118, 890
BseGI GGATG 6 cut(s) 33, 72, 394, 400, 685, 1048
BseMI GCAATG 3 cut(s) 227, 1072, 1101
BseMII CTCAG 1 cut(s) 674
BseNI ACTGG 6 cut(s) 87, 844, 1037, 1133, 1225, 1291
BseRI GAGGAG 1 cut(s) 11
BseSI GKGCMC 1 cut(s) 1032
BseXI GCAGC 4 cut(s) 119, 481, 986, 1135
BsgI GTGCAG 2 cut(s) 750, 791
Bsh1236I CGCG 2 cut(s) 98, 120
BshFI GGCC 2 cut(s) 150, 811
BshTI ACCGGT 1 cut(s) 1115
BsiHKAI GWGCWC 2 cut(s) 21, 1032
BsiSI CCGG 3 cut(s) 132, 486, 1116
BslFI GGGAC 1 cut(s) 856
BsmFI GGGAC 1 cut(s) 856
BsmI GAATGC 1 cut(s) 83
BsnI GGCC 2 cut(s) 150, 811
Bsp119I TTCGAA 1 cut(s) 143
Bsp1286I GDGCHC 2 cut(s) 21, 1032
Bsp143I GATC 5 cut(s) 358, 536, 1129, 1167, 1262
Bsp19I CCATGG 2 cut(s) 12, 890
BspACI CCGC 4 cut(s) 118, 120, 186, 903
BspANI GGCC 2 cut(s) 150, 811
BspCNI CTCAG 1 cut(s) 673
BspFNI CGCG 2 cut(s) 98, 120
BspLI GGNNCC 3 cut(s) 871, 985, 1131
BspPI GGATC 4 cut(s) 1124, 1137, 1162, 1257
BspT104I TTCGAA 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 186
BsrDI GCAATG 3 cut(s) 227, 1072, 1101
BsrFI RCCGGY 2 cut(s) 485, 1115
BsrI ACTGG 6 cut(s) 87, 844, 1037, 1133, 1225, 1291
BssAI RCCGGY 2 cut(s) 485, 1115
BssECI CCNNGG 3 cut(s) 12, 118, 890
BssMI GATC 5 cut(s) 358, 536, 1129, 1167, 1262
BssNAI GTATAC 1 cut(s) 1140
BssNI GRCGYC 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 12, 890
Bst1107I GTATAC 1 cut(s) 1140
Bst2UI CCWGG 1 cut(s) 291
Bst4CI ACNGT 4 cut(s) 698, 925, 1204, 1293
Bst6I CTCTTC 1 cut(s) 683
BstACI GRCGYC 1 cut(s) 135
BstAPI GCANNNNNTGC 1 cut(s) 233
BstBI TTCGAA 1 cut(s) 143
BstC8I GCNNGC 4 cut(s) 234, 592, 915, 1093
BstDEI CTNAG 1 cut(s) 660
BstDSI CCRYGG 3 cut(s) 12, 118, 890
BstEII GGTNACC 1 cut(s) 898
BstF5I GGATG 6 cut(s) 33, 72, 394, 400, 685, 1048
BstFNI CGCG 2 cut(s) 98, 120
BstH2I RGCGCY 1 cut(s) 955
BstHHI GCGC 2 cut(s) 98, 954
BstKTI GATC 5 cut(s) 361, 539, 1132, 1170, 1265
BstMBI GATC 5 cut(s) 358, 536, 1129, 1167, 1262
BstMWI GCNNNNNNNGC 6 cut(s) 16, 104, 233, 242, 869, 1233
BstNI CCWGG 1 cut(s) 291
BstNSI RCATGY 1 cut(s) 1095
BstPI GGTNACC 1 cut(s) 898
BstSCI CCNGG 1 cut(s) 289
BstSLI GKGCMC 1 cut(s) 1032
BstUI CGCG 2 cut(s) 98, 120
BstV1I GCAGC 4 cut(s) 119, 481, 986, 1135
BstX2I RGATCY 3 cut(s) 536, 1129, 1262
BstXI CCANNNNNNTGG 1 cut(s) 880
BstYI RGATCY 3 cut(s) 536, 1129, 1262
BstZ17I GTATAC 1 cut(s) 1140
BsuRI GGCC 2 cut(s) 150, 811
BtgI CCRYGG 3 cut(s) 12, 118, 890
BtsCI GGATG 6 cut(s) 33, 72, 394, 400, 685, 1048
BtsI GCAGTG 1 cut(s) 912
BtsIMutI CAGTG 5 cut(s) 167, 912, 1030, 1140, 1218
Cac8I GCNNGC 4 cut(s) 234, 592, 915, 1093
CfoI GCGC 2 cut(s) 98, 954
Cfr10I RCCGGY 2 cut(s) 485, 1115
Cfr13I GGNCC 2 cut(s) 810, 1289
Cfr42I CCGCGG 1 cut(s) 121
CseI GACGC 1 cut(s) 124
Csp6I GTAC 3 cut(s) 775, 921, 1258
CspAI ACCGGT 1 cut(s) 1115
CviAII CATG 6 cut(s) 13, 423, 523, 575, 891, 1092
CviQI GTAC 3 cut(s) 775, 921, 1258
DdeI CTNAG 1 cut(s) 660
DpnI GATC 5 cut(s) 360, 538, 1131, 1169, 1264
DpnII GATC 5 cut(s) 358, 536, 1129, 1167, 1262
Eam1104I CTCTTC 1 cut(s) 683
EarI CTCTTC 1 cut(s) 683
Ecl136II GAGCTC 1 cut(s) 19
Eco130I CCWWGG 2 cut(s) 12, 890
Eco24I GRGCYC 1 cut(s) 21
Eco47I GGWCC 1 cut(s) 1289
Eco47III AGCGCT 1 cut(s) 953
Eco53kI GAGCTC 1 cut(s) 19
Eco91I GGTNACC 1 cut(s) 898
EcoICRI GAGCTC 1 cut(s) 19
EcoO109I RGGNCCY 1 cut(s) 810
EcoO65I GGTNACC 1 cut(s) 898
EcoRII CCWGG 1 cut(s) 289
EcoT14I CCWWGG 2 cut(s) 12, 890
EcoT38I GRGCYC 1 cut(s) 21
ErhI CCWWGG 2 cut(s) 12, 890
FaeI CATG 6 cut(s) 16, 426, 526, 578, 894, 1095
FaqI GGGAC 1 cut(s) 856
FatI CATG 6 cut(s) 12, 422, 522, 574, 890, 1091
FauNDI CATATG 1 cut(s) 875
FbaI TGATCA 1 cut(s) 358
FblI GTMKAC 2 cut(s) 1045, 1139
Fnu4HI GCNGC 5 cut(s) 108, 121, 470, 1000, 1149
FokI GGATG 6 cut(s) 20, 79, 387, 401, 692, 1035
FriOI GRGCYC 1 cut(s) 21
Fsp4HI GCNGC 5 cut(s) 108, 121, 470, 1000, 1149
FspBI CTAG 4 cut(s) 270, 752, 767, 1232
GlaI GCGC 2 cut(s) 97, 953
GluI GCNGC 5 cut(s) 108, 121, 470, 1000, 1149
GsuI CTGGAG 1 cut(s) 1242
HaeII RGCGCY 1 cut(s) 955
HaeIII GGCC 2 cut(s) 150, 811
HapII CCGG 3 cut(s) 132, 486, 1116
HgaI GACGC 1 cut(s) 124
HhaI GCGC 2 cut(s) 98, 954
Hin1I GRCGYC 1 cut(s) 135
Hin1II CATG 6 cut(s) 16, 426, 526, 578, 894, 1095
Hin6I GCGC 2 cut(s) 96, 952
HinP1I GCGC 2 cut(s) 96, 952
HincII GTYRAC 2 cut(s) 721, 928
HindII GTYRAC 2 cut(s) 721, 928
HinfI GANTC 6 cut(s) 157, 760, 787, 830, 1023, 1213
HpaI GTTAAC 1 cut(s) 721
HpaII CCGG 3 cut(s) 132, 486, 1116
HphI GGTGA 2 cut(s) 245, 1219
Hpy166II GTNNAC 6 cut(s) 721, 928, 1030, 1046, 1140, 1178
Hpy188I TCNGA 7 cut(s) 156, 307, 430, 534, 663, 759, 964
Hpy188III TCNNGA 6 cut(s) 362, 834, 944, 970, 1175, 1302
Hpy8I GTNNAC 6 cut(s) 721, 928, 1030, 1046, 1140, 1178
Hpy99I CGWCG 2 cut(s) 140, 156
HpyAV CCTTC 7 cut(s) 49, 325, 378, 719, 1070, 1181, 1184
HpyCH4III ACNGT 4 cut(s) 698, 925, 1204, 1293
HpyCH4IV ACGT 1 cut(s) 1042
HpyCH4V TGCA 8 cut(s) 400, 673, 713, 731, 772, 1030, 1106, 1199
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 104, 233, 242, 869, 1233
HpyF3I CTNAG 1 cut(s) 660
HpySE526I ACGT 1 cut(s) 1042
Hsp92I GRCGYC 1 cut(s) 135
Hsp92II CATG 6 cut(s) 16, 426, 526, 578, 894, 1095
HspAI GCGC 2 cut(s) 96, 952
Ksp22I TGATCA 1 cut(s) 358
KspAI GTTAAC 1 cut(s) 721
KspI CCGCGG 1 cut(s) 121
Kzo9I GATC 5 cut(s) 358, 536, 1129, 1167, 1262
LmnI GCTCC 4 cut(s) 16, 24, 466, 869
Lsp1109I GCAGC 4 cut(s) 119, 481, 986, 1135
LweI GCATC 5 cut(s) 232, 409, 552, 670, 900
MaeI CTAG 4 cut(s) 270, 752, 767, 1232
MaeII ACGT 1 cut(s) 1042
MaeIII GTNAC 2 cut(s) 692, 898
MalI GATC 5 cut(s) 360, 538, 1131, 1169, 1264
MbiI CCGCTC 1 cut(s) 186
MboI GATC 5 cut(s) 358, 536, 1129, 1167, 1262
MboII GAAGA 3 cut(s) 231, 659, 700
MflI RGATCY 3 cut(s) 536, 1129, 1262
MhlI GDGCHC 2 cut(s) 21, 1032
MluCI AATT 8 cut(s) 44, 111, 172, 206, 249, 664, 708, 990
MmeI TCCRAC 2 cut(s) 134, 345
MseI TTAA 3 cut(s) 114, 441, 720
MslI CAYNNNNRTG 1 cut(s) 579
MspA1I CMGCKG 2 cut(s) 120, 999
MspI CCGG 3 cut(s) 132, 486, 1116
MspR9I CCNGG 1 cut(s) 291
Mva1269I GAATGC 1 cut(s) 83
MvaI CCWGG 1 cut(s) 291
MvnI CGCG 2 cut(s) 98, 120
MwoI GCNNNNNNNGC 6 cut(s) 16, 104, 233, 242, 869, 1233
NcoI CCATGG 2 cut(s) 12, 890
NdeI CATATG 1 cut(s) 875
NdeII GATC 5 cut(s) 358, 536, 1129, 1167, 1262
NlaIII CATG 6 cut(s) 16, 426, 526, 578, 894, 1095
NlaIV GGNNCC 3 cut(s) 871, 985, 1131
NmuCI GTSAC 1 cut(s) 692
NspI RCATGY 1 cut(s) 1095
NspV TTCGAA 1 cut(s) 143
PaeI GCATGC 1 cut(s) 1095
PcsI WCGNNNNNNNCGW 1 cut(s) 615
PctI GAATGC 1 cut(s) 83
PfeI GAWTC 6 cut(s) 157, 760, 787, 830, 1023, 1213
PinAI ACCGGT 1 cut(s) 1115
PkrI GCNGC 5 cut(s) 109, 122, 471, 1001, 1150
Psp124BI GAGCTC 1 cut(s) 21
Psp6I CCWGG 1 cut(s) 289
PspEI GGTNACC 1 cut(s) 898
PspGI CCWGG 1 cut(s) 289
PspN4I GGNNCC 3 cut(s) 871, 985, 1131
PspPI GGNCC 2 cut(s) 810, 1289
PsuI RGATCY 3 cut(s) 536, 1129, 1262
PvuII CAGCTG 1 cut(s) 999
RsaI GTAC 3 cut(s) 776, 922, 1259
RsaNI GTAC 3 cut(s) 775, 921, 1258
RseI CAYNNNNRTG 1 cut(s) 579
SacI GAGCTC 1 cut(s) 21
SacII CCGCGG 1 cut(s) 121
SaqAI TTAA 3 cut(s) 114, 441, 720
SatI GCNGC 5 cut(s) 108, 121, 470, 1000, 1149
Sau3AI GATC 5 cut(s) 358, 536, 1129, 1167, 1262
Sau96I GGNCC 2 cut(s) 810, 1289
ScaI AGTACT 1 cut(s) 776
ScrFI CCNGG 1 cut(s) 291
SduI GDGCHC 2 cut(s) 21, 1032
SfaNI GCATC 5 cut(s) 232, 409, 552, 670, 900
Sfr303I CCGCGG 1 cut(s) 121
SfuI TTCGAA 1 cut(s) 143
SgrBI CCGCGG 1 cut(s) 121
SinI GGWCC 1 cut(s) 1289
SmiMI CAYNNNNRTG 1 cut(s) 579
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
SphI GCATGC 1 cut(s) 1095
Sse9I AATT 8 cut(s) 44, 111, 172, 206, 249, 664, 708, 990
SsiI CCGC 4 cut(s) 118, 120, 186, 903
SspMI CTAG 4 cut(s) 270, 752, 767, 1232
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 1 cut(s) 289
StyI CCWWGG 2 cut(s) 12, 890
TaaI ACNGT 4 cut(s) 698, 925, 1204, 1293
TaiI ACGT 1 cut(s) 1045
TaqI TCGA 4 cut(s) 143, 618, 1005, 1301
TasI AATT 8 cut(s) 44, 111, 172, 206, 249, 664, 708, 990
TatI WGTACW 1 cut(s) 774
TauI GCSGC 1 cut(s) 123
TfiI GAWTC 6 cut(s) 157, 760, 787, 830, 1023, 1213
Tru1I TTAA 3 cut(s) 114, 441, 720
Tru9I TTAA 3 cut(s) 114, 441, 720
TscAI CASTG 5 cut(s) 167, 912, 1037, 1140, 1225
TseFI GTSAC 1 cut(s) 692
TseI GCWGC 4 cut(s) 107, 469, 999, 1148
Tsp45I GTSAC 1 cut(s) 692
TspDTI ATGAA 4 cut(s) 19, 83, 411, 1023
TspGWI ACGGA 1 cut(s) 393
TspRI CASTG 5 cut(s) 167, 912, 1037, 1140, 1225
VneI GTGCAC 1 cut(s) 1028
VpaK11BI GGWCC 1 cut(s) 1289
XapI RAATTY 2 cut(s) 249, 664
XceI RCATGY 1 cut(s) 1095
XcmI CCANNNNNNNNNTGG 1 cut(s) 50
XmiI GTMKAC 2 cut(s) 1045, 1139
XspI CTAG 4 cut(s) 270, 752, 767, 1232
ZrmI AGTACT 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.