Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0006682

Physical Location & Seq

Genomic Coordinates Reverse (-)

9802293 .. 9808509

Gene Structure 6217 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGCCTCGTCAAACATCAGAGACCTCTTGACGGCGTTCAGTCCGTCTCTGGACTTGTTCGCCATCAGCTCCGGCGACGGTCGAATCAAGATTTGGGATACTGTGAAGGGGCAGGTCCAGACTGAGTTTACAGACATTGTAGCATCGGAAGATACAAGCATATGTGCTAAACGAGAAAGCGGGCACCTCTCAGTTGATTACACTTGCATGAAATGGTTCTCTTCTGAACGAAAGAAGAAGAGGAAGCTTGGTTCCTCATTTTTGGTTTTAGGAACCGGTGGCGGCGATGTTTTGGCGCTTGATGTGGCTGCTGGGCATTTGAAGTGGAGAGTTAACGATTGCCATGCTGGTGGTGTTAGCTCCATATCATTTGCAAGAAATGCATCGTGTATTTACACTGCTGGTGCTGATGGTATGATTTGTGAAATTGACTCTTTGACGGGAAACCTGTCAGGGAAGTTCAAAGCTTCCACTAAGGCAATCTCCTCGATGTCTGTTTCATCAGATGGGAAAATATTAGCAACTGCGGCTGCACAAGTGAAGATTTTCAATTTGTCTAACCACAAAAAGATACAGAAGTTTTCTGGCCATCCTGGTGCTGTTCGCTGTCTGATCTTCACTGAAGATGGGAAGTATATCCTCTCATCTGCAGTTGGTGAAAGGTATATTTCAGTGTGGAGTATAGCTGGTGGAAAAAAGCAGTCTGCAAGTGCTGTCCTTAAAATGGAGCACCCTGCTGTCTTCGTAGATAGCAGGTGCATAGACAGTGGGGAAGTTAGTGATGTAGGTCTATATGTTTTAGCAATTTCAGAAGTTGGCATTTGTTACTTTTGGTTTGGACAGAATACTGAAGAACTACGGAATGCGAAGCCTACAAAAATTTCACTATCTTCTGATGACATTTTGTCTACAACATACAAGGGCGCATTACCCACAATATTTGCTGCGGTTTTTCAAGGAATTGCGAAAGCTGCTTCTGGTCAGTTATTTGTCGCTTATGGGTCGCCAGTGAAACCATCATTCCAGAAAATTTTGGTGCATTCTGGAACAGACATAAAGTTGAGTAGTTCCCATGATGGGGTTCTTCTACCAATGAGTCAGTCCCTTGTCAAATCTAAGAAAGGACAAAATGTACAAAATAGAGTTATTGCATTAGATCGTGCAAATGCAGAAGAAGCCTTGCATCCAATGCCAAGGATTTTTGATTCACATGGGAAAAAGAAAAGACACGATAAATTGAGTTTTGACCAAGATGAAGAAATGGTTGATTTGGATGACAGTAGGGGTCACACTGGCCTTGTGAAGAGCAAAGATGGCATGGCAGAACTTGAAGCTGACACTGCGGCAATTTGCATGGAGGACAGACTGAGATCATTAGGGATAATTAGTAAAGTAGATGACCATACATTCAACTCTACACTCAATTCTGCAACATTTAAAGGAAGAGTATCGATCTTCAGACTAATATGCCACAGAAGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000232 GO:2000234 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

495

Amino Acids

53.45

Weight (kDa)

8.91

Isoelectric Point (pI)

35.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR36-Utp21_1st	PF25171	13 - 141	7.1e-07	WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz	PF24807	66 - 234	4.7e-13	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	85 - 177	1.1e-06	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	86 - 232	2e-08	WDR36/Utp21 second beta-propeller domain
Beta-prop_ACSF4	PF13570	86 - 197	2e-06	Beta-alanine-activating enzyme, beta-propeller
WDR55	PF24796	87 - 241	5.5e-09	WDR55
Beta-prop_EML_2	PF23414	100 - 240	1.4e-11	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	111 - 229	9.7e-14	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	114 - 233	2.6e-15	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	122 - 241	2.9e-09	WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	131 - 229	1.5e-06	MABP1/WDR62 second WD40 domain
Beta-prop_WDR90_POC16_2nd	PF23393	140 - 220	2.2e-06	WDR90/POC16, second beta-propeller
Beta-prop_WDR3_1st	PF25173	148 - 232	9.1e-09	WDR3 first beta-propeller domain
WD40_MABP1-WDR62_1st	PF24780	153 - 242	1.3e-07	MABP1/WDR62 first WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11240
fragaria_vesca	FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810 FvH4_6g31810
malus_domestica	MD13G1161900.v1.1 MD16G1161700.v1.1
prunus_persica	Prupe.1G129200_v2.0.a1
pyrus_communis	pycom13g13800
rosa_chinensis	RchiOBHm_Chr4g0423831
rosa_laevigata	RLG00000007528
rosa_multiflora	Rmu_sc0003369.1_g000013 Rmu_sc0041036.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365950
rosa_rugosa	Rorug04G0191100 Rorug04G0191200 Rorug04G0191200
rosa_samantha	Rh4AG250500 Rh4BG255800 Rh4CG264000 Rh4DG250300
rosa_wichuraiana	Rw4G021460

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	744
Acc36I	ACCTGC	2 cut(s)	103, 744
AccB1I	GGYRCC	1 cut(s)	183
AccI	GTMKAC	1 cut(s)	908
AciI	CCGC	5 cut(s)	180, 282, 527, 947, 1343
AcoI	YGGCCR	1 cut(s)	586
AcsI	RAATTY	2 cut(s)	879, 1029
AcuI	CTGAAG	3 cut(s)	642, 870, 1441
AfaI	GTAC	1 cut(s)	1134
AfiI	CCNNNNNNNGG	4 cut(s)	31, 724, 1077, 1078
AgeI	ACCGGT	1 cut(s)	275
AgsI	TTSAA	6 cut(s)	322, 463, 550, 956, 1331, 1411
AhdI	GACNNNNNGTC	1 cut(s)	904
AjnI	CCWGG	1 cut(s)	592
AjuI	GAANNNNNNNTTGG	2 cut(s)	76, 108
AloI	GAACNNNNNNTCC	2 cut(s)	235, 267
AluBI	AGCT	7 cut(s)	69, 247, 360, 467, 686, 971, 1334
AluI	AGCT	7 cut(s)	69, 247, 360, 467, 686, 971, 1334
Alw21I	GWGCWC	1 cut(s)	732
Alw26I	GTCTC	2 cut(s)	15, 51
AoxI	GGCC	3 cut(s)	3, 586, 1294
ApeKI	GCWGC	4 cut(s)	308, 530, 944, 971
ApoI	RAATTY	2 cut(s)	879, 1029
AsiGI	ACCGGT	1 cut(s)	275
Asp700I	GAANNNNTTC	2 cut(s)	215, 545
AspLEI	GCGC	2 cut(s)	298, 926
AspS9I	GGNCC	1 cut(s)	115
AsuHPI	GGTGA	1 cut(s)	668
AvaII	GGWCC	1 cut(s)	115
BaeGI	GKGCMC	1 cut(s)	186
BaeI	ACNNNNGTAYC	2 cut(s)	563, 596
BalI	TGGCCA	1 cut(s)	588
BanI	GGYRCC	1 cut(s)	183
BbsI	GAAGAC	1 cut(s)	733
Bbv12I	GWGCWC	1 cut(s)	732
BbvI	GCAGC	4 cut(s)	295, 517, 931, 958
BccI	CCATC	8 cut(s)	71, 404, 500, 597, 620, 1024, 1070, 1307
BceAI	ACGGC	1 cut(s)	48
BcgI	CGANNNNNNTGC	4 cut(s)	326, 360, 468, 502
BciT130I	CCWGG	1 cut(s)	594
BciVI	GTATCC	1 cut(s)	91
BcoDI	GTCTC	2 cut(s)	15, 51
BfmI	CTRYAG	1 cut(s)	648
BfoI	RGCGCY	1 cut(s)	299
BfuAI	ACCTGC	2 cut(s)	103, 744
BfuI	GTATCC	1 cut(s)	91
BisI	GCNGC	7 cut(s)	283, 309, 528, 531, 945, 972, 1344
BlsI	GCNGC	7 cut(s)	284, 310, 529, 532, 946, 973, 1345
Bme1390I	CCNGG	1 cut(s)	594
Bme18I	GGWCC	1 cut(s)	115
BmeRI	GACNNNNNGTC	1 cut(s)	904
BmgT120I	GGNCC	1 cut(s)	115
BmiI	GGNNCC	3 cut(s)	185, 253, 274
BmrFI	CCNGG	1 cut(s)	594
BmsI	GCATC	3 cut(s)	152, 392, 1192
BpiI	GAAGAC	1 cut(s)	733
Bsa29I	ATCGAT	1 cut(s)	1451
BsaI	GGTCTC	1 cut(s)	15
BsaJI	CCNNGG	1 cut(s)	1193
BsaWI	WCCGGW	1 cut(s)	275
Bsc4I	CCNNNNNNNGG	4 cut(s)	31, 724, 1077, 1078
Bse118I	RCCGGY	1 cut(s)	275
Bse1I	ACTGG	2 cut(s)	1007, 1297
BseBI	CCWGG	1 cut(s)	594
BseCI	ATCGAT	1 cut(s)	1451
BseDI	CCNNGG	1 cut(s)	1193
BseGI	GGATG	3 cut(s)	589, 1183, 1279
BseLI	CCNNNNNNNGG	4 cut(s)	31, 724, 1077, 1078
BseMII	CTCAG	3 cut(s)	114, 204, 1358
BseNI	ACTGG	2 cut(s)	1007, 1297
BseRI	GAGGAG	1 cut(s)	475
BseSI	GKGCMC	1 cut(s)	186
BseXI	GCAGC	4 cut(s)	295, 517, 931, 958
BseYI	CCCAGC	1 cut(s)	311
BsgI	GTGCAG	1 cut(s)	516
Bsh1285I	CGRYCG	1 cut(s)	82
BshFI	GGCC	3 cut(s)	5, 588, 1296
BshNI	GGYRCC	1 cut(s)	183
BshTI	ACCGGT	1 cut(s)	275
BshVI	ATCGAT	1 cut(s)	1451
BsiEI	CGRYCG	1 cut(s)	82
BsiHKAI	GWGCWC	1 cut(s)	732
BsiSI	CCGG	2 cut(s)	72, 276
BslFI	GGGAC	1 cut(s)	1087
BslI	CCNNNNNNNGG	4 cut(s)	31, 724, 1077, 1078
BsmAI	GTCTC	2 cut(s)	15, 51
BsmBI	CGTCTC	1 cut(s)	51
BsmFI	GGGAC	1 cut(s)	1087
BsmI	GAATGC	2 cut(s)	868, 1039
BsnI	GGCC	3 cut(s)	5, 588, 1296
Bso31I	GGTCTC	1 cut(s)	15
Bsp1286I	GDGCHC	2 cut(s)	186, 732
Bsp1407I	TGTACA	1 cut(s)	1132
Bsp143I	GATC	4 cut(s)	612, 1156, 1370, 1452
BspACI	CCGC	5 cut(s)	180, 282, 527, 947, 1343
BspANI	GGCC	3 cut(s)	5, 588, 1296
BspCNI	CTCAG	3 cut(s)	115, 203, 1359
BspDI	ATCGAT	1 cut(s)	1451
BspLI	GGNNCC	3 cut(s)	185, 253, 274
BspMAI	CTGCAG	1 cut(s)	652
BspMI	ACCTGC	2 cut(s)	103, 744
BspQI	GCTCTTC	1 cut(s)	1298
BspT107I	GGYRCC	1 cut(s)	183
BspTNI	GGTCTC	1 cut(s)	15
BsrFI	RCCGGY	1 cut(s)	275
BsrGI	TGTACA	1 cut(s)	1132
BsrI	ACTGG	2 cut(s)	1007, 1297
BssAI	RCCGGY	1 cut(s)	275
BssECI	CCNNGG	1 cut(s)	1193
BssMI	GATC	4 cut(s)	612, 1156, 1370, 1452
BssT1I	CCWWGG	1 cut(s)	1193
Bst2UI	CCWGG	1 cut(s)	594
Bst4CI	ACNGT	4 cut(s)	80, 103, 767, 1280
Bst6I	CTCTTC	4 cut(s)	226, 233, 1298, 1438
BstAPI	GCANNNNNTGC	2 cut(s)	380, 1189
BstAUI	TGTACA	1 cut(s)	1132
BstC8I	GCNNGC	1 cut(s)	182
BstDEI	CTNAG	5 cut(s)	123, 190, 474, 1116, 1367
BstF5I	GGATG	3 cut(s)	589, 1183, 1279
BstH2I	RGCGCY	1 cut(s)	299
BstHHI	GCGC	2 cut(s)	298, 926
BstKTI	GATC	4 cut(s)	615, 1159, 1373, 1455
BstMAI	GTCTC	2 cut(s)	15, 51
BstMBI	GATC	4 cut(s)	612, 1156, 1370, 1452
BstMCI	CGRYCG	1 cut(s)	82
BstMWI	GCNNNNNNNGC	7 cut(s)	380, 527, 971, 1175, 1189, 1314, 1340
BstNI	CCWGG	1 cut(s)	594
BstSCI	CCNGG	1 cut(s)	592
BstSFI	CTRYAG	1 cut(s)	648
BstSLI	GKGCMC	1 cut(s)	186
BstV1I	GCAGC	4 cut(s)	295, 517, 931, 958
BstV2I	GAAGAC	1 cut(s)	733
BstXI	CCANNNNNNTGG	1 cut(s)	350
Bsu15I	ATCGAT	1 cut(s)	1451
BsuI	GTATCC	1 cut(s)	91
BsuRI	GGCC	3 cut(s)	5, 588, 1296
BsuTUI	ATCGAT	1 cut(s)	1451
BtgZI	GCGATG	1 cut(s)	300
BtsCI	GGATG	3 cut(s)	589, 1183, 1279
BtsI	GCAGTG	2 cut(s)	396, 1338
BtsIMutI	CAGTG	7 cut(s)	396, 618, 678, 772, 1014, 1290, 1338
BveI	ACCTGC	2 cut(s)	103, 744
Cac8I	GCNNGC	1 cut(s)	182
CfoI	GCGC	2 cut(s)	298, 926
Cfr10I	RCCGGY	1 cut(s)	275
Cfr13I	GGNCC	1 cut(s)	115
ClaI	ATCGAT	1 cut(s)	1451
Csp6I	GTAC	1 cut(s)	1133
CspAI	ACCGGT	1 cut(s)	275
CspCI	CAANNNNNGTGG	2 cut(s)	922, 957
CviAII	CATG	6 cut(s)	208, 344, 1073, 1211, 1318, 1354
CviQI	GTAC	1 cut(s)	1133
DdeI	CTNAG	5 cut(s)	123, 190, 474, 1116, 1367
DpnI	GATC	4 cut(s)	614, 1158, 1372, 1454
DpnII	GATC	4 cut(s)	612, 1156, 1370, 1452
DraI	TTTAAA	1 cut(s)	1438
DriI	GACNNNNNGTC	1 cut(s)	904
EaeI	YGGCCR	1 cut(s)	586
Eam1104I	CTCTTC	4 cut(s)	226, 233, 1298, 1438
Eam1105I	GACNNNNNGTC	1 cut(s)	904
EarI	CTCTTC	4 cut(s)	226, 233, 1298, 1438
Eco130I	CCWWGG	1 cut(s)	1193
Eco31I	GGTCTC	1 cut(s)	15
Eco47I	GGWCC	1 cut(s)	115
Eco57I	CTGAAG	3 cut(s)	642, 870, 1441
EcoRII	CCWGG	1 cut(s)	592
EcoT14I	CCWWGG	1 cut(s)	1193
EcoT22I	ATGCAT	1 cut(s)	385
ErhI	CCWWGG	1 cut(s)	1193
Esp3I	CGTCTC	1 cut(s)	51
FaeI	CATG	6 cut(s)	211, 347, 1076, 1214, 1321, 1357
FaqI	GGGAC	1 cut(s)	1087
FatI	CATG	6 cut(s)	207, 343, 1072, 1210, 1317, 1353
FauI	CCCGC	1 cut(s)	173
FauNDI	CATATG	1 cut(s)	161
FblI	GTMKAC	1 cut(s)	908
Fnu4HI	GCNGC	7 cut(s)	283, 309, 528, 531, 945, 972, 1344
FokI	GGATG	3 cut(s)	576, 1170, 1286
Fsp4HI	GCNGC	7 cut(s)	283, 309, 528, 531, 945, 972, 1344
GlaI	GCGC	2 cut(s)	297, 925
GluI	GCNGC	7 cut(s)	283, 309, 528, 531, 945, 972, 1344
GsaI	CCCAGC	1 cut(s)	315
HaeII	RGCGCY	1 cut(s)	299
HaeIII	GGCC	3 cut(s)	5, 588, 1296
HapII	CCGG	2 cut(s)	72, 276
HhaI	GCGC	2 cut(s)	298, 926
Hin1II	CATG	6 cut(s)	211, 347, 1076, 1214, 1321, 1357
Hin6I	GCGC	2 cut(s)	296, 924
HinP1I	GCGC	2 cut(s)	296, 924
HincII	GTYRAC	1 cut(s)	334
HindII	GTYRAC	1 cut(s)	334
HindIII	AAGCTT	2 cut(s)	245, 465
HinfI	GANTC	4 cut(s)	84, 431, 1096, 1205
HpaI	GTTAAC	1 cut(s)	334
HpaII	CCGG	2 cut(s)	72, 276
HphI	GGTGA	1 cut(s)	668
Hpy166II	GTNNAC	3 cut(s)	129, 334, 909
Hpy188I	TCNGA	8 cut(s)	20, 148, 226, 505, 612, 811, 895, 1460
Hpy188III	TCNNGA	6 cut(s)	28, 50, 88, 118, 1024, 1044
Hpy8I	GTNNAC	3 cut(s)	129, 334, 909
Hpy99I	CGWCG	1 cut(s)	80
HpyAV	CCTTC	1 cut(s)	100
HpyCH4III	ACNGT	4 cut(s)	80, 103, 767, 1280
HpyF10VI	GCNNNNNNNGC	7 cut(s)	380, 527, 971, 1175, 1189, 1314, 1340
HpyF3I	CTNAG	5 cut(s)	123, 190, 474, 1116, 1367
Hsp92II	CATG	6 cut(s)	211, 347, 1076, 1214, 1321, 1357
HspAI	GCGC	2 cut(s)	296, 924
KspAI	GTTAAC	1 cut(s)	334
Kzo9I	GATC	4 cut(s)	612, 1156, 1370, 1452
LguI	GCTCTTC	1 cut(s)	1298
LmnI	GCTCC	3 cut(s)	74, 365, 727
Lsp1109I	GCAGC	4 cut(s)	295, 517, 931, 958
LweI	GCATC	3 cut(s)	152, 392, 1192
MaeIII	GTNAC	2 cut(s)	824, 1286
MalI	GATC	4 cut(s)	614, 1158, 1372, 1454
MboI	GATC	4 cut(s)	612, 1156, 1370, 1452
MhlI	GDGCHC	2 cut(s)	186, 732
MlsI	TGGCCA	1 cut(s)	588
MluNI	TGGCCA	1 cut(s)	588
MlyI	GAGTC	2 cut(s)	425, 1105
MnlI	CCTC	8 cut(s)	16, 35, 197, 234, 265, 496, 650, 1351
Mox20I	TGGCCA	1 cut(s)	588
Mph1103I	ATGCAT	1 cut(s)	385
MroXI	GAANNNNTTC	2 cut(s)	215, 545
MscI	TGGCCA	1 cut(s)	588
MseI	TTAA	3 cut(s)	333, 720, 1437
MslI	CAYNNNNRTG	3 cut(s)	206, 348, 594
Msp20I	TGGCCA	1 cut(s)	588
MspI	CCGG	2 cut(s)	72, 276
MspR9I	CCNGG	1 cut(s)	594
Mva1269I	GAATGC	2 cut(s)	868, 1039
MvaI	CCWGG	1 cut(s)	594
MwoI	GCNNNNNNNGC	7 cut(s)	380, 527, 971, 1175, 1189, 1314, 1340
NdeI	CATATG	1 cut(s)	161
NdeII	GATC	4 cut(s)	612, 1156, 1370, 1452
NlaIII	CATG	6 cut(s)	211, 347, 1076, 1214, 1321, 1357
NlaIV	GGNNCC	3 cut(s)	185, 253, 274
NmuCI	GTSAC	1 cut(s)	1286
NsiI	ATGCAT	1 cut(s)	385
PaqCI	CACCTGC	1 cut(s)	744
PciSI	GCTCTTC	1 cut(s)	1298
PctI	GAATGC	2 cut(s)	868, 1039
PdmI	GAANNNNTTC	2 cut(s)	215, 545
PfeI	GAWTC	2 cut(s)	84, 1205
PinAI	ACCGGT	1 cut(s)	275
PkrI	GCNGC	7 cut(s)	284, 310, 529, 532, 946, 973, 1345
PleI	GAGTC	2 cut(s)	425, 1104
PpsI	GAGTC	2 cut(s)	425, 1104
Psp6I	CCWGG	1 cut(s)	592
PspFI	CCCAGC	1 cut(s)	311
PspGI	CCWGG	1 cut(s)	592
PspN4I	GGNNCC	3 cut(s)	185, 253, 274
PspPI	GGNCC	1 cut(s)	115
PstI	CTGCAG	1 cut(s)	652
RsaI	GTAC	1 cut(s)	1134
RsaNI	GTAC	1 cut(s)	1133
RseI	CAYNNNNRTG	3 cut(s)	206, 348, 594
SapI	GCTCTTC	1 cut(s)	1298
SaqAI	TTAA	3 cut(s)	333, 720, 1437
SatI	GCNGC	7 cut(s)	283, 309, 528, 531, 945, 972, 1344
Sau3AI	GATC	4 cut(s)	612, 1156, 1370, 1452
Sau96I	GGNCC	1 cut(s)	115
SchI	GAGTC	2 cut(s)	425, 1105
ScrFI	CCNGG	1 cut(s)	594
SduI	GDGCHC	2 cut(s)	186, 732
SfaNI	GCATC	3 cut(s)	152, 392, 1192
SfcI	CTRYAG	1 cut(s)	648
SinI	GGWCC	1 cut(s)	115
SmiMI	CAYNNNNRTG	3 cut(s)	206, 348, 594
SsiI	CCGC	5 cut(s)	180, 282, 527, 947, 1343
SspI	AATATT	2 cut(s)	516, 939
StyD4I	CCNGG	1 cut(s)	592
StyI	CCWWGG	1 cut(s)	1193
TaaI	ACNGT	4 cut(s)	80, 103, 767, 1280
TaqI	TCGA	3 cut(s)	82, 488, 1451
TatI	WGTACW	1 cut(s)	1132
TauI	GCSGC	3 cut(s)	285, 530, 1346
TfiI	GAWTC	2 cut(s)	84, 1205
Tru1I	TTAA	3 cut(s)	333, 720, 1437
Tru9I	TTAA	3 cut(s)	333, 720, 1437
TscAI	CASTG	7 cut(s)	403, 625, 678, 772, 1014, 1297, 1345
TseFI	GTSAC	1 cut(s)	1286
TseI	GCWGC	4 cut(s)	308, 530, 944, 971
Tsp45I	GTSAC	1 cut(s)	1286
TspDTI	ATGAA	3 cut(s)	224, 489, 1269
TspGWI	ACGGA	2 cut(s)	33, 874
TspRI	CASTG	7 cut(s)	403, 625, 678, 772, 1014, 1297, 1345
VpaK11BI	GGWCC	1 cut(s)	115
XapI	RAATTY	2 cut(s)	879, 1029
XmiI	GTMKAC	1 cut(s)	908
XmnI	GAANNNNTTC	2 cut(s)	215, 545
Zsp2I	ATGCAT	1 cut(s)	385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.