Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005450

Physical Location & Seq

Genomic Coordinates Reverse (-)

10363562 .. 10368461

Gene Structure 4900 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGGACCCGCAATACCCGACCAAGCCGGCGCGGTCGTACGGGCCGCAGATTAAAATGACGATTCAGCCCTCGCAGCACTCCGACAACGACCGGTCCAGCGGCGAGCTGCGCGCGCTGGATTGCAACCTCACCGCCCTCTGCGACCACATACAGACGGAGGGCTTCAATTCCGGTGCCTTCTCCGATATGGTCGTCCACGCCATGGGCTCCACCTACCACCTCCACCGCCTCATTCTCTCCCGCAGCCCCTACTTCAGGAACATGCTTCATGGACCTTGGAAAGAAGCCAGTGCCCCTGTTTTAACCTTACATATTGACGATAAGAATGTTAACGGAGAAGCAATTGCAATGGCTTTGGCGTATCTGTACGGTCACCACCCCAAGCTTAATGATAACAATGCATTTCGTGTTTTGGCTGCCGCTTCTTTTCTTGACCTTCAGGATTTATGTGCAATATGCACAGACTTCATTATATCTGAATTATGGACTTCAAACTTCTTAGCCTATCAGGTGTTCGCGGAGAGCCAAGATTATGGCATACATGGAGAACGGGTAAGAAATGCTTGCTGGGGCTACCTTTGTCAAAGTGGTTCCATGGAGTTGAAAGAGGTGCTTCCAAAACTTTCAGCTCAGACCCTGCTTGCATTGCTGACCTCTGATGAGCTCTGGGTACCCAGTGAAGAGAAACGGTTTGAGCTGGCATTCTATGCATTCCTTGCAAAAGGTGCTCAAAGCAAACAGGAAGACTATGATCATGGAAGTTCCAGTTCTGAGGCAGGAACGGATACTCCATCTGATTCTTCTAACGCAAAGGGAAAGAATCTGATTGATAGCTTTGCTAACAAAAGGTTGGAGTCTGAAGTCGGGCGCTTAACTATAAAAGATGATGTAGAGGGCCATAATACTGCTCGTAGTCTTTTGATAGAGCTTGCAGACTGTGTGGTTGATTTCCAAACAAGAGTTTCAAATTCCAAACAGCAAGTCCAACAAGTTGCGGACCCTCAAGCCAATTTGGAGCCAGGATACAACTATGTCATGAGAACCTCATGTTATGCTGAAATGCCTGTTGGTGTTGGAGCAAGTAGACTGGGGGCAAATGGAGTGGCTATGGAAGGGCCATCTGATGAAGGATCATCCTATCACTTAAATAACAACAGTTGGTTTGCCAGGGACCAGTCAAGGCAATGCTCTTCAATGAACTCTTCCACTAGTGAGCTCATGCCAAATGATTGGGGAAGATGTGGCATGCCTCCTCTTTCATGGGGTGGCAGGGTTGTAGGGAGAAGACAGGTTAAAGGTTATGCTAAAGGGAACTTTGGGGTTGGTGGGGAGGAATATGATGCATTTGTTAATATATTTGAAGGCGGATCTCTTTTATACTGCAACATGTCTTTTGAGGCACTTTTGAATGTACGAAAGCAACTTGAGGAACTGGGGTTCCCCTGCAAAGCTGTAAACGATGGTCTTTGGCTGCAGATGCTTTTAAGCCAGAGAGTCCAAGAAGTTGGTGCTGATACGTGCAAAAATTGCTGTCTTACAAGTATAGCGTGCAGTTGCAGACAGCAATTTTCATTCTCACAAGGAGTTACTACCGGATACTACATGCAAGAGCATAATCAGAATAATTCTCCTGGTGTATATGTTGCTGAGTCTGCTGCAGGTGAAGGAAATGGTCTCTTTAGGCCTGTACGTGTGCATGTCAGGGGTCCTATTGATGGGCTTGCTGGTATCGGACGCGGAACTACATTTGTACCAGCAACTGCCTGGCCTCCAACTCGGTTTGTCTTTTCCCGTGTGCCATTTGGCATGGGCAACAGAAATTGCCAGCAGTCTCTTGCTAATGATGATTCAGAGGCTAGAGCTGACCATAATGGGGACCTGTCTGGAGATGGATTAACAGCTTTAGTTGGGCTAAGCCAAGGAGGGAACAATGTAGCTAATTCTCATGGGGAGCAAACAGAGAGAGGCTATGAGATGGATATGCAAAGCAGAATGGCTGGAACGTCCATGTCAGTGCCAAGTACTAGTGGTGTACCCATTCAGATGGTAGAGTCGTCAGACCATGCGCTTGGGATTGAGTGGGATAATGCAAGCAGTTCTTCCATCTCATTGGATATGAAAACACCTTTAAGTCACTTCCCTCCTTTCCGCTTTGGGGTGCAATTTGAGGATGTGCACAGGCTTAGTGATGGCCAAGTGAAGCATTCTTCAGAAGTCTTTTATGCTGGTTCTTTATGGAAGGTTAGCGTTCAGGCTTTTAATGGCATGAACGATCCTCAAGGACGTCGAACACTTGGATTATTTATTCACCGACGTAAGGCAGAGATTACTGATTCATTCAGAAAGGTGCAGATGTATGTTGATTCTCGTGAAAAGGTTACAGCCCGCTATCAGTTAATTTGCCCATCAAAGAGGGAAGTCATGGTGTTTGGGAGTTTCAAGCAAACAGGCACGCTTTTACCAAAAGCTCCCAAGGGCTGGGGATGGCGATCGGCTCTACTGTTTGATGAGCTTGCTGATCTTCTCCAAAACGGGGCCCTAAGAGTGGCTGCTGTTGTACAGCTTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006355 GO:0007276 GO:0007283 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016363 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031326 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032504 GO:0032991 GO:0034399 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0048232 GO:0048609 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB

Protein Analysis

857

Amino Acids

94.13

Weight (kDa)

5.8

Isoelectric Point (pI)

48.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	55 - 159	1.8e-13	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15840 AT4G15840
fragaria_vesca	FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240
malus_domestica	MD08G1066800.v1.1 MD13G1167900.v1.1
prunus_persica	Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1
pyrus_communis	pycom13g14360
rosa_chinensis	RchiOBHm_Chr4g0422381
rosa_laevigata	RLG00000007614
rosa_multiflora	Rmu_sc0013245.1_g000001 Rmu_sc0034689.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364500
rosa_rugosa	Rorug04G0179600 Rorug04G0179700
rosa_samantha	Rh4AG239100 Rh4AG239500 Rh4BG242700 Rh4CG254100 Rh4DG238200
rosa_wichuraiana	Rw4G020670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1649
AatII	GACGTC	1 cut(s)	2287
Acc36I	ACCTGC	1 cut(s)	1649
Acc65I	GGTACC	1 cut(s)	670
AccB1I	GGYRCC	2 cut(s)	173, 670
AccB7I	CCANNNNNTGG	2 cut(s)	202, 2478
AccI	GTMKAC	1 cut(s)	1084
AccII	CGCG	5 cut(s)	31, 111, 113, 518, 1737
AclWI	GGATC	3 cut(s)	1138, 1375, 2267
AcoI	YGGCCR	1 cut(s)	2191
AcsI	RAATTY	1 cut(s)	967
AcuI	CTGAAG	4 cut(s)	238, 422, 879, 2193
AcyI	GRCGYC	1 cut(s)	2284
AfaI	GTAC	9 cut(s)	38, 368, 672, 1413, 1689, 1752, 2023, 2034, 2559
AfiI	CCNNNNNNNGG	9 cut(s)	202, 255, 1715, 1873, 2155, 2317, 2478, 2533, 2545
AflIII	ACRYGT	2 cut(s)	1386, 1690
AgeI	ACCGGT	1 cut(s)	90
AgsI	TTSAA	8 cut(s)	166, 492, 604, 966, 1194, 1361, 1408, 2440
AhlI	ACTAGT	2 cut(s)	1208, 2024
AjnI	CCWGG	4 cut(s)	1018, 1166, 1630, 1763
AjuI	GAANNNNNNNTTGG	2 cut(s)	1050, 1082
AloI	GAACNNNNNNTCC	6 cut(s)	772, 804, 1421, 1422, 1453, 1454
Alw21I	GWGCWC	4 cut(s)	666, 730, 1218, 2178
Alw26I	GTCTC	2 cut(s)	1679, 1836
Alw44I	GTGCAC	1 cut(s)	2174
AlwI	GGATC	3 cut(s)	1138, 1375, 2267
AlwNI	CAGNNNCTG	2 cut(s)	637, 1760
AoxI	GGCC	7 cut(s)	41, 895, 1115, 1682, 1766, 2191, 2535
ApaI	GGGCCC	1 cut(s)	2539
ApaLI	GTGCAC	1 cut(s)	2174
ApeKI	GCWGC	7 cut(s)	73, 106, 243, 416, 1471, 1655, 2549
ApoI	RAATTY	1 cut(s)	967
ArsI	GACNNNNNNTTYG	2 cut(s)	966, 998
AsiGI	ACCGGT	1 cut(s)	90
Asp718I	GGTACC	1 cut(s)	670
AspLEI	GCGC	6 cut(s)	31, 111, 113, 115, 870, 2068
AsuHPI	GGTGA	4 cut(s)	121, 365, 1673, 2300
AvaII	GGWCC	7 cut(s)	4, 93, 272, 997, 1171, 1706, 1876
BaeGI	GKGCMC	3 cut(s)	295, 2178, 2539
BaeI	ACNNNNGTAYC	2 cut(s)	1734, 1767
BalI	TGGCCA	1 cut(s)	2193
BanI	GGYRCC	2 cut(s)	173, 670
BanII	GRGCYC	4 cut(s)	209, 666, 1218, 2539
BauI	CACGAG	1 cut(s)	2367
BbsI	GAAGAC	2 cut(s)	750, 1291
Bbv12I	GWGCWC	4 cut(s)	666, 730, 1218, 2178
BbvI	GCAGC	7 cut(s)	85, 93, 255, 403, 1458, 1642, 2536
BciT130I	CCWGG	4 cut(s)	1020, 1168, 1632, 1765
BciVI	GTATCC	3 cut(s)	778, 1016, 1589
BclI	TGATCA	1 cut(s)	751
BcoDI	GTCTC	2 cut(s)	1679, 1836
BcuI	ACTAGT	2 cut(s)	1208, 2024
BfaI	CTAG	3 cut(s)	1209, 1857, 2025
BfmI	CTRYAG	2 cut(s)	1472, 1656
BfoI	RGCGCY	1 cut(s)	871
BfuAI	ACCTGC	1 cut(s)	1649
BfuI	GTATCC	3 cut(s)	778, 1016, 1589
BlpI	GCTNAGC	1 cut(s)	1913
BmcAI	AGTACT	1 cut(s)	2023
Bme1390I	CCNGG	4 cut(s)	1020, 1168, 1632, 1765
Bme18I	GGWCC	7 cut(s)	4, 93, 272, 997, 1171, 1706, 1876
BmrFI	CCNGG	4 cut(s)	1020, 1168, 1632, 1765
BmrI	ACTGGG	3 cut(s)	669, 1097, 1442
BmsI	GCATC	2 cut(s)	1330, 1467
BmuI	ACTGGG	3 cut(s)	669, 1097, 1442
BpiI	GAAGAC	2 cut(s)	750, 1291
BpmI	CTGGAG	1 cut(s)	1905
Bpu1102I	GCTNAGC	1 cut(s)	1913
BpuEI	CTTGAG	3 cut(s)	987, 1445, 2262
BsaAI	YACGTR	2 cut(s)	1518, 1691
BsaBI	GATNNNNATC	1 cut(s)	2488
BsaHI	GRCGYC	1 cut(s)	2284
BsaI	GGTCTC	1 cut(s)	1679
BsaJI	CCNNGG	6 cut(s)	201, 275, 594, 1167, 1918, 2472
BsaWI	WCCGGW	3 cut(s)	90, 170, 1592
BsaXI	ACNNNNNCTCC	4 cut(s)	537, 567, 772, 802
Bsc4I	CCNNNNNNNGG	9 cut(s)	202, 255, 1715, 1873, 2155, 2317, 2478, 2533, 2545
Bse118I	RCCGGY	2 cut(s)	25, 90
Bse1I	ACTGG	6 cut(s)	288, 675, 765, 1092, 1174, 1437
Bse3DI	GCAATG	3 cut(s)	354, 644, 1190
Bse8I	GATNNNNATC	1 cut(s)	2488
BseBI	CCWGG	4 cut(s)	1020, 1168, 1632, 1765
BseDI	CCNNGG	6 cut(s)	201, 275, 594, 1167, 1918, 2472
BseGI	GGATG	3 cut(s)	1133, 2176, 2489
BseJI	GATNNNNATC	1 cut(s)	2488
BseLI	CCNNNNNNNGG	9 cut(s)	202, 255, 1715, 1873, 2155, 2317, 2478, 2533, 2545
BseMI	GCAATG	3 cut(s)	354, 644, 1190
BseMII	CTCAG	3 cut(s)	644, 762, 1638
BseNI	ACTGG	6 cut(s)	288, 675, 765, 1092, 1174, 1437
BsePI	GCGCGC	2 cut(s)	109, 111
BseRI	GAGGAG	1 cut(s)	1242
BseSI	GKGCMC	3 cut(s)	295, 2178, 2539
BseXI	GCAGC	7 cut(s)	85, 93, 255, 403, 1458, 1642, 2536
BseYI	CCCAGC	2 cut(s)	567, 2478
BsgI	GTGCAG	2 cut(s)	1570, 2369
Bsh1236I	CGCG	5 cut(s)	31, 111, 113, 518, 1737
Bsh1285I	CGRYCG	3 cut(s)	35, 91, 2492
BshFI	GGCC	7 cut(s)	43, 897, 1117, 1684, 1768, 2193, 2537
BshNI	GGYRCC	2 cut(s)	173, 670
BshTI	ACCGGT	1 cut(s)	90
BsiEI	CGRYCG	3 cut(s)	35, 91, 2492
BsiHKAI	GWGCWC	4 cut(s)	666, 730, 1218, 2178
BsiSI	CCGG	4 cut(s)	26, 91, 171, 1593
BsiWI	CGTACG	1 cut(s)	36
BslFI	GGGAC	2 cut(s)	1184, 1889
BslI	CCNNNNNNNGG	9 cut(s)	202, 255, 1715, 1873, 2155, 2317, 2478, 2533, 2545
BsmAI	GTCTC	2 cut(s)	1679, 1836
BsmFI	GGGAC	2 cut(s)	1184, 1889
BsmI	GAATGC	3 cut(s)	701, 710, 2203
BsnI	GGCC	7 cut(s)	43, 897, 1117, 1684, 1768, 2193, 2537
Bso31I	GGTCTC	1 cut(s)	1679
Bsp120I	GGGCCC	1 cut(s)	2535
Bsp1286I	GDGCHC	7 cut(s)	209, 295, 666, 730, 1218, 2178, 2539
Bsp1407I	TGTACA	1 cut(s)	2557
Bsp143I	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
Bsp1720I	GCTNAGC	1 cut(s)	1913
Bsp19I	CCATGG	2 cut(s)	201, 594
BspANI	GGCC	7 cut(s)	43, 897, 1117, 1684, 1768, 2193, 2537
BspCNI	CTCAG	3 cut(s)	643, 763, 1639
BspFNI	CGCG	5 cut(s)	31, 111, 113, 518, 1737
BspHI	TCATGA	1 cut(s)	1035
BspMAI	CTGCAG	2 cut(s)	1476, 1660
BspMI	ACCTGC	1 cut(s)	1649
BspPI	GGATC	3 cut(s)	1138, 1375, 2267
BspQI	GCTCTTC	1 cut(s)	1195
BspT107I	GGYRCC	2 cut(s)	173, 670
BspTNI	GGTCTC	1 cut(s)	1679
BsrDI	GCAATG	3 cut(s)	354, 644, 1190
BsrFI	RCCGGY	2 cut(s)	25, 90
BsrGI	TGTACA	1 cut(s)	2557
BsrI	ACTGG	6 cut(s)	288, 675, 765, 1092, 1174, 1437
BssAI	RCCGGY	2 cut(s)	25, 90
BssECI	CCNNGG	6 cut(s)	201, 275, 594, 1167, 1918, 2472
BssHII	GCGCGC	2 cut(s)	109, 111
BssMI	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
BssNI	GRCGYC	1 cut(s)	2284
BssSI	CACGAG	1 cut(s)	2367
BssT1I	CCWWGG	5 cut(s)	201, 275, 594, 1918, 2472
Bst2BI	CACGAG	1 cut(s)	2367
Bst2UI	CCWGG	4 cut(s)	1020, 1168, 1632, 1765
Bst4CI	ACNGT	5 cut(s)	371, 690, 938, 1157, 2502
Bst6I	CTCTTC	3 cut(s)	675, 1195, 1207
BstACI	GRCGYC	1 cut(s)	2284
BstAPI	GCANNNNNTGC	4 cut(s)	707, 716, 725, 1527
BstAUI	TGTACA	1 cut(s)	2557
BstBAI	YACGTR	2 cut(s)	1518, 1691
BstDEI	CTNAG	7 cut(s)	499, 630, 771, 1647, 1913, 2183, 2540
BstDSI	CCRYGG	2 cut(s)	201, 594
BstEII	GGTNACC	1 cut(s)	371
BstENI	CCTNNNNNAGG	1 cut(s)	253
BstF5I	GGATG	3 cut(s)	1133, 2176, 2489
BstFNI	CGCG	5 cut(s)	31, 111, 113, 518, 1737
BstH2I	RGCGCY	1 cut(s)	871
BstHHI	GCGC	6 cut(s)	31, 111, 113, 115, 870, 2068
BstKTI	GATC	6 cut(s)	754, 1133, 1370, 2275, 2492, 2521
BstMAI	GTCTC	2 cut(s)	1679, 1836
BstMBI	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
BstMCI	CGRYCG	3 cut(s)	35, 91, 2492
BstNI	CCWGG	4 cut(s)	1020, 1168, 1632, 1765
BstNSI	RCATGY	5 cut(s)	265, 1249, 1390, 1606, 1700
BstPI	GGTNACC	1 cut(s)	371
BstSCI	CCNGG	4 cut(s)	1018, 1166, 1630, 1763
BstSFI	CTRYAG	2 cut(s)	1472, 1656
BstSLI	GKGCMC	3 cut(s)	295, 2178, 2539
BstUI	CGCG	5 cut(s)	31, 111, 113, 518, 1737
BstV1I	GCAGC	7 cut(s)	85, 93, 255, 403, 1458, 1642, 2536
BstV2I	GAAGAC	2 cut(s)	750, 1291
BstX2I	RGATCY	1 cut(s)	1367
BstXI	CCANNNNNNTGG	6 cut(s)	533, 1230, 1505, 2044, 2069, 2110
BstYI	RGATCY	1 cut(s)	1367
BsuI	GTATCC	3 cut(s)	778, 1016, 1589
BsuRI	GGCC	7 cut(s)	43, 897, 1117, 1684, 1768, 2193, 2537
BtgI	CCRYGG	2 cut(s)	201, 594
BtsCI	GGATG	3 cut(s)	1133, 2176, 2489
BtsIMutI	CAGTG	3 cut(s)	295, 682, 2019
BveI	ACCTGC	1 cut(s)	1649
CaiI	CAGNNNCTG	2 cut(s)	637, 1760
CciI	TCATGA	1 cut(s)	1035
CfoI	GCGC	6 cut(s)	31, 111, 113, 115, 870, 2068
Cfr10I	RCCGGY	2 cut(s)	25, 90
CseI	GACGC	1 cut(s)	1743
Csp6I	GTAC	9 cut(s)	37, 367, 671, 1412, 1688, 1751, 2022, 2033, 2558
CspAI	ACCGGT	1 cut(s)	90
CspCI	CAANNNNNGTGG	2 cut(s)	1083, 1118
CviQI	GTAC	9 cut(s)	37, 367, 671, 1412, 1688, 1751, 2022, 2033, 2558
DdeI	CTNAG	7 cut(s)	499, 630, 771, 1647, 1913, 2183, 2540
DpnI	GATC	6 cut(s)	753, 1132, 1369, 2274, 2491, 2520
DpnII	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
EaeI	YGGCCR	1 cut(s)	2191
Eam1104I	CTCTTC	3 cut(s)	675, 1195, 1207
EarI	CTCTTC	3 cut(s)	675, 1195, 1207
EciI	GGCGGA	1 cut(s)	1380
Ecl136II	GAGCTC	2 cut(s)	664, 1216
Eco130I	CCWWGG	5 cut(s)	201, 275, 594, 1918, 2472
Eco147I	AGGCCT	1 cut(s)	1684
Eco24I	GRGCYC	4 cut(s)	209, 666, 1218, 2539
Eco31I	GGTCTC	1 cut(s)	1679
Eco47I	GGWCC	7 cut(s)	4, 93, 272, 997, 1171, 1706, 1876
Eco53kI	GAGCTC	2 cut(s)	664, 1216
Eco57I	CTGAAG	4 cut(s)	238, 422, 879, 2193
Eco91I	GGTNACC	1 cut(s)	371
EcoICRI	GAGCTC	2 cut(s)	664, 1216
EcoNI	CCTNNNNNAGG	1 cut(s)	253
EcoO109I	RGGNCCY	4 cut(s)	1706, 1876, 2535, 2536
EcoO65I	GGTNACC	1 cut(s)	371
EcoRII	CCWGG	4 cut(s)	1018, 1166, 1630, 1763
EcoT14I	CCWWGG	5 cut(s)	201, 275, 594, 1918, 2472
EcoT22I	ATGCAT	3 cut(s)	403, 712, 1345
EcoT38I	GRGCYC	4 cut(s)	209, 666, 1218, 2539
ErhI	CCWWGG	5 cut(s)	201, 275, 594, 1918, 2472
FalI	AAGNNNNNCTT	6 cut(s)	547, 579, 597, 629, 2083, 2115
FaqI	GGGAC	2 cut(s)	1184, 1889
FauI	CCCGC	3 cut(s)	15, 248, 2393
FbaI	TGATCA	1 cut(s)	751
FblI	GTMKAC	1 cut(s)	1084
FokI	GGATG	3 cut(s)	1120, 2183, 2496
FriOI	GRGCYC	4 cut(s)	209, 666, 1218, 2539
FspBI	CTAG	3 cut(s)	1209, 1857, 2025
GlaI	GCGC	6 cut(s)	30, 110, 112, 114, 869, 2067
GsaI	CCCAGC	2 cut(s)	571, 2482
GsuI	CTGGAG	1 cut(s)	1905
HaeII	RGCGCY	1 cut(s)	871
HaeIII	GGCC	7 cut(s)	43, 897, 1117, 1684, 1768, 2193, 2537
HapII	CCGG	4 cut(s)	26, 91, 171, 1593
HgaI	GACGC	1 cut(s)	1743
HhaI	GCGC	6 cut(s)	31, 111, 113, 115, 870, 2068
Hin1I	GRCGYC	1 cut(s)	2284
Hin6I	GCGC	6 cut(s)	29, 109, 111, 113, 868, 2066
HinP1I	GCGC	6 cut(s)	29, 109, 111, 113, 868, 2066
HincII	GTYRAC	1 cut(s)	331
HindII	GTYRAC	1 cut(s)	331
HindIII	AAGCTT	1 cut(s)	383
HpaI	GTTAAC	1 cut(s)	331
HpaII	CCGG	4 cut(s)	26, 91, 171, 1593
HphI	GGTGA	4 cut(s)	121, 365, 1673, 2300
Hpy166II	GTNNAC	6 cut(s)	196, 331, 1085, 1456, 2033, 2176
Hpy188III	TCNNGA	6 cut(s)	256, 431, 440, 1036, 1884, 2369
Hpy8I	GTNNAC	6 cut(s)	196, 331, 1085, 1456, 2033, 2176
Hpy99I	CGWCG	2 cut(s)	2289, 2316
HpyAV	CCTTC	7 cut(s)	187, 446, 1106, 1121, 1355, 1658, 2233
HpyCH4III	ACNGT	5 cut(s)	371, 690, 938, 1157, 2502
HpyCH4IV	ACGT	5 cut(s)	1517, 1690, 2003, 2284, 2314
HpyF3I	CTNAG	7 cut(s)	499, 630, 771, 1647, 1913, 2183, 2540
HpySE526I	ACGT	5 cut(s)	1517, 1690, 2003, 2284, 2314
Hsp92I	GRCGYC	1 cut(s)	2284
HspAI	GCGC	6 cut(s)	29, 109, 111, 113, 868, 2066
KpnI	GGTACC	1 cut(s)	674
KroI	GCCGGC	1 cut(s)	25
KroNI	GCCGGC	1 cut(s)	27
Ksp22I	TGATCA	1 cut(s)	751
KspAI	GTTAAC	1 cut(s)	331
Kzo9I	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
LguI	GCTCTTC	1 cut(s)	1195
LmnI	GCTCC	5 cut(s)	212, 1015, 1076, 1951, 2473
Lsp1109I	GCAGC	7 cut(s)	85, 93, 255, 403, 1458, 1642, 2536
LweI	GCATC	2 cut(s)	1330, 1467
MaeI	CTAG	3 cut(s)	1209, 1857, 2025
MaeII	ACGT	5 cut(s)	1517, 1690, 2003, 2284, 2314
MaeIII	GTNAC	4 cut(s)	371, 1585, 2132, 2377
MalI	GATC	6 cut(s)	753, 1132, 1369, 2274, 2491, 2520
MboI	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
MfeI	CAATTG	1 cut(s)	342
MflI	RGATCY	1 cut(s)	1367
MhlI	GDGCHC	7 cut(s)	209, 295, 666, 730, 1218, 2178, 2539
MlsI	TGGCCA	1 cut(s)	2193
MluNI	TGGCCA	1 cut(s)	2193
MlyI	GAGTC	4 cut(s)	863, 1503, 1658, 2060
MmeI	TCCRAC	5 cut(s)	105, 831, 1009, 1054, 1796
Mox20I	TGGCCA	1 cut(s)	2193
Mph1103I	ATGCAT	3 cut(s)	403, 712, 1345
MroNI	GCCGGC	1 cut(s)	25
MscI	TGGCCA	1 cut(s)	2193
MslI	CAYNNNNRTG	2 cut(s)	2012, 2042
Msp20I	TGGCCA	1 cut(s)	2193
MspA1I	CMGCKG	1 cut(s)	99
MspI	CCGG	4 cut(s)	26, 91, 171, 1593
MspR9I	CCNGG	4 cut(s)	1020, 1168, 1632, 1765
MunI	CAATTG	1 cut(s)	342
Mva1269I	GAATGC	3 cut(s)	701, 710, 2203
MvaI	CCWGG	4 cut(s)	1020, 1168, 1632, 1765
MvnI	CGCG	5 cut(s)	31, 111, 113, 518, 1737
NaeI	GCCGGC	1 cut(s)	27
NcoI	CCATGG	2 cut(s)	201, 594
NdeII	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
NgoMIV	GCCGGC	1 cut(s)	25
NmuCI	GTSAC	2 cut(s)	371, 2132
NsiI	ATGCAT	3 cut(s)	403, 712, 1345
NspI	RCATGY	5 cut(s)	265, 1249, 1390, 1606, 1700
PaeI	GCATGC	1 cut(s)	1249
PagI	TCATGA	1 cut(s)	1035
PaqCI	CACCTGC	1 cut(s)	1649
PauI	GCGCGC	2 cut(s)	109, 111
PceI	AGGCCT	1 cut(s)	1684
PciI	ACATGT	1 cut(s)	1386
PciSI	GCTCTTC	1 cut(s)	1195
PctI	GAATGC	3 cut(s)	701, 710, 2203
PdiI	GCCGGC	1 cut(s)	27
PfeI	GAWTC	6 cut(s)	61, 797, 820, 1847, 2333, 2363
Pfl23II	CGTACG	1 cut(s)	36
PflMI	CCANNNNNTGG	2 cut(s)	202, 2478
PinAI	ACCGGT	1 cut(s)	90
Ple19I	CGATCG	1 cut(s)	2492
PleI	GAGTC	4 cut(s)	862, 1502, 1657, 2059
PpsI	GAGTC	4 cut(s)	862, 1502, 1657, 2059
Ppu21I	YACGTR	2 cut(s)	1518, 1691
PpuMI	RGGWCCY	2 cut(s)	1706, 1876
PscI	ACATGT	1 cut(s)	1386
Psp124BI	GAGCTC	2 cut(s)	666, 1218
Psp5II	RGGWCCY	2 cut(s)	1706, 1876
Psp6I	CCWGG	4 cut(s)	1018, 1166, 1630, 1763
PspEI	GGTNACC	1 cut(s)	371
PspFI	CCCAGC	2 cut(s)	567, 2478
PspGI	CCWGG	4 cut(s)	1018, 1166, 1630, 1763
PspLI	CGTACG	1 cut(s)	36
PspOMI	GGGCCC	1 cut(s)	2535
PspPPI	RGGWCCY	2 cut(s)	1706, 1876
PstI	CTGCAG	2 cut(s)	1476, 1660
PstNI	CAGNNNCTG	2 cut(s)	637, 1760
PsuI	RGATCY	1 cut(s)	1367
PteI	GCGCGC	2 cut(s)	109, 111
PvuI	CGATCG	1 cut(s)	2492
RsaI	GTAC	9 cut(s)	38, 368, 672, 1413, 1689, 1752, 2023, 2034, 2559
RsaNI	GTAC	9 cut(s)	37, 367, 671, 1412, 1688, 1751, 2022, 2033, 2558
RseI	CAYNNNNRTG	2 cut(s)	2012, 2042
SacI	GAGCTC	2 cut(s)	666, 1218
SapI	GCTCTTC	1 cut(s)	1195
Sau3AI	GATC	6 cut(s)	751, 1130, 1367, 2272, 2489, 2518
ScaI	AGTACT	1 cut(s)	2023
SchI	GAGTC	4 cut(s)	863, 1503, 1658, 2060
ScrFI	CCNGG	4 cut(s)	1020, 1168, 1632, 1765
SduI	GDGCHC	7 cut(s)	209, 295, 666, 730, 1218, 2178, 2539
SfaNI	GCATC	2 cut(s)	1330, 1467
SfcI	CTRYAG	2 cut(s)	1472, 1656
SinI	GGWCC	7 cut(s)	4, 93, 272, 997, 1171, 1706, 1876
SmiMI	CAYNNNNRTG	2 cut(s)	2012, 2042
SmlI	CTYRAG	3 cut(s)	1002, 1424, 2277
SmoI	CTYRAG	3 cut(s)	1002, 1424, 2277
SpeI	ACTAGT	2 cut(s)	1208, 2024
SphI	GCATGC	1 cut(s)	1249
SseBI	AGGCCT	1 cut(s)	1684
SspMI	CTAG	3 cut(s)	1209, 1857, 2025
SstI	GAGCTC	2 cut(s)	666, 1218
StuI	AGGCCT	1 cut(s)	1684
StyD4I	CCNGG	4 cut(s)	1018, 1166, 1630, 1763
StyI	CCWWGG	5 cut(s)	201, 275, 594, 1918, 2472
TaaI	ACNGT	5 cut(s)	371, 690, 938, 1157, 2502
TaiI	ACGT	5 cut(s)	1520, 1693, 2006, 2287, 2317
TaqI	TCGA	1 cut(s)	2287
TatI	WGTACW	2 cut(s)	2021, 2557
TauI	GCSGC	3 cut(s)	46, 102, 422
TfiI	GAWTC	6 cut(s)	61, 797, 820, 1847, 2333, 2363
TscAI	CASTG	3 cut(s)	295, 682, 2019
TseFI	GTSAC	2 cut(s)	371, 2132
TseI	GCWGC	7 cut(s)	73, 106, 243, 416, 1471, 1655, 2549
Tsp45I	GTSAC	2 cut(s)	371, 2132
TspDTI	ATGAA	9 cut(s)	257, 457, 1140, 1211, 1248, 1560, 2132, 2282, 2325
TspGWI	ACGGA	3 cut(s)	170, 348, 797
TspRI	CASTG	3 cut(s)	295, 682, 2019
Van91I	CCANNNNNTGG	2 cut(s)	202, 2478
VneI	GTGCAC	1 cut(s)	2174
VpaK11BI	GGWCC	7 cut(s)	4, 93, 272, 997, 1171, 1706, 1876
XagI	CCTNNNNNAGG	1 cut(s)	253
XapI	RAATTY	1 cut(s)	967
XceI	RCATGY	5 cut(s)	265, 1249, 1390, 1606, 1700
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1761
XmiI	GTMKAC	1 cut(s)	1084
XspI	CTAG	3 cut(s)	1209, 1857, 2025
ZraI	GACGTC	1 cut(s)	2285
ZrmI	AGTACT	1 cut(s)	2023
Zsp2I	ATGCAT	3 cut(s)	403, 712, 1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.