Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0013083

Physical Location & Seq

Genomic Coordinates Forward (+)

14620225 .. 14623246

Gene Structure 3022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g18490.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGTTTTTCGTGCTTCCAAAAGGTTATGATTTTGAGTTTTACTTCTTGCATCAAACTCAAATAAAATATAAGCTGTGTGAATTTAGAAACATAATTAAAACGAATTGCGAACTAAAGGTGAAATTTTACTTAATATCCGAAGCTGAACATTTAGCAACGTGTGATATATACGACTATATATTTTCAACAAGGAGCTGGGTGCACCTACTTTTTCACATTCATAACCTTTGTAGAGGGAGTTTCCACCCATGCATTACAGGTTTGAAACTCCTTCATCTTCTAAATTATTGTAATAAAGTCTTTAACATCTGGAGGGGGCGCGGTCATTCCAATTTTAAGTTTTCAAGACATCAATATATCTATAGGTGTTATCTGAAGGGATCTTCATTTTTTGAGTCTTCATTAATAGTCATCATTGTAAAAAAAAAAAAATCAATTCAGTCCGGAACCATTTACCCATTTGATTGTTATGATGAAATTTCAATGTTTCTTAGAACCAAATGTTCGTCAATTTCTTTGAACTCAATTAGAGATGATCTAGGAAATGGAGTGGGCCCCAATTTTTTCACACAACTTTTGACACATGATTTTGTGGGGCCCACTCCACAATGTATTTTAACCATTAGTATGATCTATCTTTTAGAATATCAGGTTGTACAAAGAAACATTATACCATTAATCAAACGGTCATATGATTTCAAATTTAGTGTTTTTGACGAAGTGAGCTCCATAAAAACATGTGTCAAAAGTTGTTTAAAATTAAGAACTGGTGTCACGGATCCATCCTTATATATATTTTTGACACACATATTAACACATATTGTTTATGACCCACTTTGTAATGTATTTCAACAATCCAAACTACAAATACACACCTATCAATTACATTCACTCGTAGTTAAAAAAAAAAAAGAACGAATACAAATTTTTTGTGGCCATAATGTTTTGAAGATTTTAATCTACCGATCCAAATATACTAGTCTACTCAAAACAACACGGTCGTTTGACAGCCTTTACATCCTATTTTACGTTTATCAACCTAATATCCTAACATTAAAAGAAAAAGAAAAAGAAAAAGTTAAAATACAATTCCAAAGCGTAAATCAGAAAACGTATCGGTCAAGTTTATCTGTAAATCCAAGCCACGAGACTCTTGACTTTTATCCAAGCGCCATTTCCTCGAACGTTCACAAAAAGCAAAAAACCTTGGTAAACATCTTTGAAAGCGAAATTACACGGACAATCCAACGGTGTTCCTTGAAGCGATTTAAAAAGAAAGACGTATTATGCATCCAGTTGTTACATTCATCTGTCAGAAGAATCAACATGCTGACACGTGGACAATTTCCTTCAATGATATCAGAAGCTTCAATTGACCCACGTGCTCAAATTCATCCAACTTGTGTGGCACCCCACAATAATACAATAATACAAAAACCTAATAAAATATGTTTACCCCTACCTTTAGGCCATTTTAACCTGGGATCCTGTTGGCCTCTATTGGTCCGCATATGCGGGACCCATTGGAATTGGGTATATATGATGGACGAGGGTAGAGTATTCCAAGCAGAAAACAAAAACACCCCAATTCTTCAAATGAATTACTCTACTTTTGATTCTCCATACTCCAATTTGTCACCTGAATCTTCGTTTGGATCATCATTTTCTTGGGATGATGGTCTTAAATTTGGCAACAATTCCCTTCCTTTCAATGAAAATGACTCGGAAGAAATGCTTCTCTACGGTCTGATTTCCGAGGGCACCCAAGAAATCACATCAAGCGTCTCTGTTTTTGCAAACCCAATTAAAGAAGAGGAGGTGAGCTCCGCATCTGAAGAAGAAAACCTGAAAAAGGAAAAGTCCTACAGAGGGGTTCGGAGGCGGCCGTGGGGCAAGTTTGCTGCAGAAATAAGAGACTCCACTAGACATGGCATAAGGGTGTGGCTAGGCACATTTGACAGTGCTGAAGCCGCAGCTCTTGCCTATGATCAAGCTGCCTTTTCCATGCGAGGCTCTGCGGCGGTTCTCAATTTTCCAGTTGAAAGAGTCCGCAAATCGCTTAGGGATCGATCAATTATGGTACCTCAGATTTGGAAGGTTGTTCGCCGGTGGTGGCTCTTAAGCGAAAGCACTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071369 GO:0071395 GO:0071495 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

AP2

Protein Analysis

713

Amino Acids

82.74

Weight (kDa)

9.35

Isoelectric Point (pI)

46.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23240
fragaria_vesca	FvH4_4g03470
malus_domestica	MD13G1213100.v1.1 MD16G1216900.v1.1
prunus_persica	Prupe.1G037900_v2.0.a1
pyrus_communis	pycom13g18490 pycom16g18120
rosa_chinensis	RchiOBHm_Chr4g0392501
rosa_laevigata	RLG00000009802
rosa_multiflora	Rmu_sc0016640.1_g000010 Rmu_sc0021954.1_g000001
rosa_roxburghii	Rroxscaffold_5G00337740
rosa_rugosa	Rorug03G0339300
rosa_samantha	Rh4AG043300 Rh4BG038200 Rh4CG046200 Rh4DG040400
rosa_wichuraiana	Rw4G003400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2080
AccB1I	GGYRCC	3 cut(s)	1408, 1760, 2080
AccI	GTMKAC	1 cut(s)	982
AccII	CGCG	1 cut(s)	321
AccIII	TCCGGA	1 cut(s)	443
AciI	CCGC	9 cut(s)	321, 1507, 1515, 1827, 1882, 1971, 2018, 2021, 2050
AclI	AACGTT	1 cut(s)	1185
AclWI	GGATC	8 cut(s)	388, 773, 786, 960, 1479, 1492, 1663, 2073
AcoI	YGGCCR	2 cut(s)	934, 1883
AcsI	RAATTY	7 cut(s)	80, 122, 477, 701, 924, 1389, 1685
AcuI	CTGAAG	3 cut(s)	395, 1854, 1986
AcvI	CACGTG	2 cut(s)	1337, 1382
AfaI	GTAC	2 cut(s)	657, 2082
AfiI	CCNNNNNNNGG	2 cut(s)	1852, 1869
AflII	CTTAAG	1 cut(s)	2119
AflIII	ACRYGT	3 cut(s)	158, 737, 1334
AhlI	ACTAGT	1 cut(s)	977
AjnI	CCWGG	1 cut(s)	1479
AjuI	GAANNNNNNNTTGG	4 cut(s)	1159, 1191, 1635, 1667
AluBI	AGCT	8 cut(s)	73, 143, 195, 726, 1367, 1824, 1976, 1994
AluI	AGCT	8 cut(s)	73, 143, 195, 726, 1367, 1824, 1976, 1994
Alw21I	GWGCWC	4 cut(s)	204, 728, 1387, 1826
Alw26I	GTCTC	3 cut(s)	1142, 1789, 1908
Alw44I	GTGCAC	1 cut(s)	200
AlwI	GGATC	8 cut(s)	388, 773, 786, 960, 1479, 1492, 1663, 2073
Aor13HI	TCCGGA	1 cut(s)	443
AoxI	GGCC	6 cut(s)	553, 596, 934, 1468, 1493, 1883
ApaI	GGGCCC	2 cut(s)	557, 600
ApaLI	GTGCAC	1 cut(s)	200
ApeKI	GCWGC	3 cut(s)	1901, 1973, 1994
ApoI	RAATTY	7 cut(s)	80, 122, 477, 701, 924, 1389, 1685
AseI	ATTAAT	2 cut(s)	404, 677
Asp700I	GAANNNNTTC	1 cut(s)	1734
Asp718I	GGTACC	1 cut(s)	2080
AspLEI	GCGC	2 cut(s)	321, 1172
AspS9I	GGNCC	6 cut(s)	553, 554, 596, 597, 1504, 1518
AsuHPI	GGTGA	3 cut(s)	130, 1629, 1831
AvaII	GGWCC	2 cut(s)	1504, 1518
BaeGI	GKGCMC	4 cut(s)	204, 557, 600, 1763
BalI	TGGCCA	1 cut(s)	936
BamHI	GGATCC	2 cut(s)	778, 1484
BanI	GGYRCC	3 cut(s)	1408, 1760, 2080
BanII	GRGCYC	4 cut(s)	557, 600, 728, 1826
BauI	CACGAG	1 cut(s)	1145
BbrPI	CACGTG	2 cut(s)	1337, 1382
BbsI	GAAGAC	1 cut(s)	390
Bbv12I	GWGCWC	4 cut(s)	204, 728, 1387, 1826
BbvI	GCAGC	3 cut(s)	1888, 1981, 1985
BccI	CCATC	3 cut(s)	790, 1537, 1670
BceAI	ACGGC	1 cut(s)	1870
BciT130I	CCWGG	1 cut(s)	1481
BclI	TGATCA	1 cut(s)	1987
BcoDI	GTCTC	3 cut(s)	1142, 1789, 1908
BcuI	ACTAGT	1 cut(s)	977
BfaI	CTAG	4 cut(s)	539, 978, 1923, 1946
BfmI	CTRYAG	3 cut(s)	361, 1864, 1902
BfoI	RGCGCY	1 cut(s)	1173
BfrI	CTTAAG	1 cut(s)	2119
BisI	GCNGC	6 cut(s)	1883, 1902, 1971, 1974, 1995, 2019
BlsI	GCNGC	6 cut(s)	1884, 1903, 1972, 1975, 1996, 2020
Bme1390I	CCNGG	1 cut(s)	1481
Bme18I	GGWCC	2 cut(s)	1504, 1518
BmgT120I	GGNCC	6 cut(s)	553, 554, 596, 597, 1504, 1518
BmrFI	CCNGG	1 cut(s)	1481
BmsI	GCATC	3 cut(s)	58, 1299, 1838
BpiI	GAAGAC	1 cut(s)	390
BplI	GAGNNNNNCTC	2 cut(s)	1808, 1840
BpmI	CTGGAG	1 cut(s)	331
Bpu10I	CCTNAGC	1 cut(s)	2060
Bsa29I	ATCGAT	1 cut(s)	2068
BsaAI	YACGTR	2 cut(s)	1337, 1382
BsaBI	GATNNNNATC	1 cut(s)	956
BsaJI	CCNNGG	4 cut(s)	1206, 1480, 1755, 1886
BsaWI	WCCGGW	1 cut(s)	443
Bsc4I	CCNNNNNNNGG	2 cut(s)	1852, 1869
Bse118I	RCCGGY	1 cut(s)	2106
Bse1I	ACTGG	3 cut(s)	772, 1294, 2036
Bse8I	GATNNNNATC	1 cut(s)	956
BseAI	TCCGGA	1 cut(s)	443
BseBI	CCWGG	1 cut(s)	1481
BseCI	ATCGAT	1 cut(s)	2068
BseDI	CCNNGG	4 cut(s)	1206, 1480, 1755, 1886
BseGI	GGATG	5 cut(s)	782, 1017, 1290, 1393, 1678
BseJI	GATNNNNATC	1 cut(s)	956
BseLI	CCNNNNNNNGG	2 cut(s)	1852, 1869
BseMII	CTCAG	1 cut(s)	2099
BseNI	ACTGG	3 cut(s)	772, 1294, 2036
BseRI	GAGGAG	1 cut(s)	1829
BseSI	GKGCMC	4 cut(s)	204, 557, 600, 1763
BseX3I	CGGCCG	1 cut(s)	1883
BseXI	GCAGC	3 cut(s)	1888, 1981, 1985
BseYI	CCCAGC	1 cut(s)	195
Bsh1236I	CGCG	1 cut(s)	321
Bsh1285I	CGRYCG	2 cut(s)	1001, 1886
BshFI	GGCC	6 cut(s)	555, 598, 936, 1470, 1495, 1885
BshNI	GGYRCC	3 cut(s)	1408, 1760, 2080
BshVI	ATCGAT	1 cut(s)	2068
BsiEI	CGRYCG	2 cut(s)	1001, 1886
BsiHKAI	GWGCWC	4 cut(s)	204, 728, 1387, 1826
BsiSI	CCGG	2 cut(s)	444, 2107
BslFI	GGGAC	1 cut(s)	1531
BslI	CCNNNNNNNGG	2 cut(s)	1852, 1869
BsmAI	GTCTC	3 cut(s)	1142, 1789, 1908
BsmBI	CGTCTC	1 cut(s)	1789
BsmFI	GGGAC	1 cut(s)	1531
BsnI	GGCC	6 cut(s)	555, 598, 936, 1470, 1495, 1885
Bsp120I	GGGCCC	2 cut(s)	553, 596
Bsp1286I	GDGCHC	7 cut(s)	204, 557, 600, 728, 1387, 1763, 1826
Bsp13I	TCCGGA	1 cut(s)	443
Bsp1407I	TGTACA	1 cut(s)	655
BspACI	CCGC	9 cut(s)	321, 1507, 1515, 1827, 1882, 1971, 2018, 2021, 2050
BspANI	GGCC	6 cut(s)	555, 598, 936, 1470, 1495, 1885
BspCNI	CTCAG	1 cut(s)	2098
BspDI	ATCGAT	1 cut(s)	2068
BspEI	TCCGGA	1 cut(s)	443
BspFNI	CGCG	1 cut(s)	321
BspMAI	CTGCAG	1 cut(s)	1906
BspPI	GGATC	8 cut(s)	388, 773, 786, 960, 1479, 1492, 1663, 2073
BspT107I	GGYRCC	3 cut(s)	1408, 1760, 2080
BspTI	CTTAAG	1 cut(s)	2119
BsrFI	RCCGGY	1 cut(s)	2106
BsrGI	TGTACA	1 cut(s)	655
BsrI	ACTGG	3 cut(s)	772, 1294, 2036
BssAI	RCCGGY	1 cut(s)	2106
BssECI	CCNNGG	4 cut(s)	1206, 1480, 1755, 1886
BssSI	CACGAG	1 cut(s)	1145
BssT1I	CCWWGG	1 cut(s)	1206
Bst2BI	CACGAG	1 cut(s)	1145
Bst2UI	CCWGG	1 cut(s)	1481
Bst4CI	ACNGT	5 cut(s)	687, 999, 1251, 1745, 1961
Bst6I	CTCTTC	1 cut(s)	1806
BstAFI	CTTAAG	1 cut(s)	2119
BstAPI	GCANNNNNTGC	1 cut(s)	1979
BstAUI	TGTACA	1 cut(s)	655
BstBAI	YACGTR	2 cut(s)	1337, 1382
BstDEI	CTNAG	3 cut(s)	491, 2060, 2085
BstDSI	CCRYGG	1 cut(s)	1886
BstENI	CCTNNNNNAGG	1 cut(s)	1850
BstF5I	GGATG	5 cut(s)	782, 1017, 1290, 1393, 1678
BstFNI	CGCG	1 cut(s)	321
BstH2I	RGCGCY	1 cut(s)	1173
BstHHI	GCGC	2 cut(s)	321, 1172
BstMAI	GTCTC	3 cut(s)	1142, 1789, 1908
BstMCI	CGRYCG	2 cut(s)	1001, 1886
BstMWI	GCNNNNNNNGC	2 cut(s)	1970, 1979
BstNI	CCWGG	1 cut(s)	1481
BstNSI	RCATGY	2 cut(s)	741, 1330
BstSCI	CCNGG	1 cut(s)	1479
BstSFI	CTRYAG	3 cut(s)	361, 1864, 1902
BstSLI	GKGCMC	4 cut(s)	204, 557, 600, 1763
BstUI	CGCG	1 cut(s)	321
BstV1I	GCAGC	3 cut(s)	1888, 1981, 1985
BstV2I	GAAGAC	1 cut(s)	390
BstX2I	RGATCY	3 cut(s)	380, 778, 1484
BstYI	RGATCY	3 cut(s)	380, 778, 1484
BstZI	CGGCCG	1 cut(s)	1883
Bsu15I	ATCGAT	1 cut(s)	2068
BsuRI	GGCC	6 cut(s)	555, 598, 936, 1470, 1495, 1885
BsuTUI	ATCGAT	1 cut(s)	2068
BtgI	CCRYGG	1 cut(s)	1886
BtsCI	GGATG	5 cut(s)	782, 1017, 1290, 1393, 1678
BtsIMutI	CAGTG	1 cut(s)	1966
CfoI	GCGC	2 cut(s)	321, 1172
Cfr10I	RCCGGY	1 cut(s)	2106
Cfr13I	GGNCC	6 cut(s)	553, 554, 596, 597, 1504, 1518
ClaI	ATCGAT	1 cut(s)	2068
CseI	GACGC	1 cut(s)	1771
Csp6I	GTAC	2 cut(s)	656, 2081
CspCI	CAANNNNNGTGG	2 cut(s)	1386, 1421
CviAII	CATG	7 cut(s)	249, 584, 738, 1327, 1928, 2005, 2136
CviQI	GTAC	2 cut(s)	656, 2081
DdeI	CTNAG	3 cut(s)	491, 2060, 2085
DraI	TTTAAA	2 cut(s)	756, 1270
EaeI	YGGCCR	2 cut(s)	934, 1883
EagI	CGGCCG	1 cut(s)	1883
Eam1104I	CTCTTC	1 cut(s)	1806
EarI	CTCTTC	1 cut(s)	1806
Ecl136II	GAGCTC	2 cut(s)	726, 1824
EclXI	CGGCCG	1 cut(s)	1883
Eco130I	CCWWGG	1 cut(s)	1206
Eco24I	GRGCYC	4 cut(s)	557, 600, 728, 1826
Eco32I	GATATC	1 cut(s)	1359
Eco47I	GGWCC	2 cut(s)	1504, 1518
Eco52I	CGGCCG	1 cut(s)	1883
Eco53kI	GAGCTC	2 cut(s)	726, 1824
Eco57I	CTGAAG	3 cut(s)	395, 1854, 1986
Eco72I	CACGTG	2 cut(s)	1337, 1382
EcoICRI	GAGCTC	2 cut(s)	726, 1824
EcoNI	CCTNNNNNAGG	1 cut(s)	1850
EcoO109I	RGGNCCY	3 cut(s)	554, 596, 1518
EcoRII	CCWGG	1 cut(s)	1479
EcoRV	GATATC	1 cut(s)	1359
EcoT14I	CCWWGG	1 cut(s)	1206
EcoT22I	ATGCAT	2 cut(s)	254, 1292
EcoT38I	GRGCYC	4 cut(s)	557, 600, 728, 1826
ErhI	CCWWGG	1 cut(s)	1206
Esp3I	CGTCTC	1 cut(s)	1789
FaeI	CATG	7 cut(s)	252, 587, 741, 1330, 1931, 2008, 2139
FalI	AAGNNNNNCTT	2 cut(s)	1719, 1751
FaqI	GGGAC	1 cut(s)	1531
FatI	CATG	7 cut(s)	248, 583, 737, 1326, 1927, 2004, 2135
FauI	CCCGC	1 cut(s)	1508
FauNDI	CATATG	2 cut(s)	691, 1511
FbaI	TGATCA	1 cut(s)	1987
FblI	GTMKAC	1 cut(s)	982
Fnu4HI	GCNGC	6 cut(s)	1883, 1902, 1971, 1974, 1995, 2019
FokI	GGATG	5 cut(s)	769, 1004, 1277, 1380, 1685
FriOI	GRGCYC	4 cut(s)	557, 600, 728, 1826
Fsp4HI	GCNGC	6 cut(s)	1883, 1902, 1971, 1974, 1995, 2019
FspBI	CTAG	4 cut(s)	539, 978, 1923, 1946
GlaI	GCGC	2 cut(s)	320, 1171
GluI	GCNGC	6 cut(s)	1883, 1902, 1971, 1974, 1995, 2019
GsaI	CCCAGC	1 cut(s)	199
GsuI	CTGGAG	1 cut(s)	331
HaeII	RGCGCY	1 cut(s)	1173
HaeIII	GGCC	6 cut(s)	555, 598, 936, 1470, 1495, 1885
HapII	CCGG	2 cut(s)	444, 2107
HgaI	GACGC	1 cut(s)	1771
HhaI	GCGC	2 cut(s)	321, 1172
Hin1II	CATG	7 cut(s)	252, 587, 741, 1330, 1931, 2008, 2139
Hin6I	GCGC	2 cut(s)	319, 1170
HinP1I	GCGC	2 cut(s)	319, 1170
HindIII	AAGCTT	1 cut(s)	1365
HinfI	GANTC	8 cut(s)	395, 1150, 1320, 1616, 1643, 1721, 1916, 2046
HpaII	CCGG	2 cut(s)	444, 2107
HphI	GGTGA	3 cut(s)	130, 1629, 1831
Hpy166II	GTNNAC	6 cut(s)	202, 983, 1189, 1213, 1340, 1454
Hpy188III	TCNNGA	4 cut(s)	310, 345, 444, 1154
Hpy8I	GTNNAC	6 cut(s)	202, 983, 1189, 1213, 1340, 1454
HpyAV	CCTTC	5 cut(s)	281, 370, 1359, 1712, 2089
HpyCH4III	ACNGT	5 cut(s)	687, 999, 1251, 1745, 1961
HpyCH4IV	ACGT	7 cut(s)	158, 1029, 1112, 1185, 1281, 1336, 1381
HpyCH4V	TGCA	6 cut(s)	49, 202, 252, 1290, 1796, 1904
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1970, 1979
HpyF3I	CTNAG	3 cut(s)	491, 2060, 2085
HpySE526I	ACGT	7 cut(s)	158, 1029, 1112, 1185, 1281, 1336, 1381
Hsp92II	CATG	7 cut(s)	252, 587, 741, 1330, 1931, 2008, 2139
HspAI	GCGC	2 cut(s)	319, 1170
KflI	GGGWCCC	1 cut(s)	1518
Kpn2I	TCCGGA	1 cut(s)	443
KpnI	GGTACC	1 cut(s)	2084
Ksp22I	TGATCA	1 cut(s)	1987
LmnI	GCTCC	3 cut(s)	192, 731, 1829
Lsp1109I	GCAGC	3 cut(s)	1888, 1981, 1985
LweI	GCATC	3 cut(s)	58, 1299, 1838
MaeI	CTAG	4 cut(s)	539, 978, 1923, 1946
MaeII	ACGT	7 cut(s)	158, 1029, 1112, 1185, 1281, 1336, 1381
MaeIII	GTNAC	3 cut(s)	772, 1299, 1635
MfeI	CAATTG	1 cut(s)	1371
MflI	RGATCY	3 cut(s)	380, 778, 1484
MhlI	GDGCHC	7 cut(s)	204, 557, 600, 728, 1387, 1763, 1826
MlsI	TGGCCA	1 cut(s)	936
MluNI	TGGCCA	1 cut(s)	936
MlyI	GAGTC	5 cut(s)	404, 1144, 1715, 1910, 2055
MmeI	TCCRAC	2 cut(s)	1270, 1421
Mox20I	TGGCCA	1 cut(s)	936
Mph1103I	ATGCAT	2 cut(s)	254, 1292
MroI	TCCGGA	1 cut(s)	443
MroXI	GAANNNNTTC	1 cut(s)	1734
MscI	TGGCCA	1 cut(s)	936
MslI	CAYNNNNRTG	2 cut(s)	626, 1937
Msp20I	TGGCCA	1 cut(s)	936
MspCI	CTTAAG	1 cut(s)	2119
MspI	CCGG	2 cut(s)	444, 2107
MspR9I	CCNGG	1 cut(s)	1481
MunI	CAATTG	1 cut(s)	1371
MvaI	CCWGG	1 cut(s)	1481
MvnI	CGCG	1 cut(s)	321
MwoI	GCNNNNNNNGC	2 cut(s)	1970, 1979
NdeI	CATATG	2 cut(s)	691, 1511
NlaIII	CATG	7 cut(s)	252, 587, 741, 1330, 1931, 2008, 2139
NmuCI	GTSAC	2 cut(s)	772, 1635
NsiI	ATGCAT	2 cut(s)	254, 1292
NspI	RCATGY	2 cut(s)	741, 1330
PciI	ACATGT	1 cut(s)	737
PdmI	GAANNNNTTC	1 cut(s)	1734
PfeI	GAWTC	3 cut(s)	1320, 1616, 1643
PkrI	GCNGC	6 cut(s)	1884, 1903, 1972, 1975, 1996, 2020
PleI	GAGTC	5 cut(s)	403, 1144, 1715, 1910, 2054
PmaCI	CACGTG	2 cut(s)	1337, 1382
PmlI	CACGTG	2 cut(s)	1337, 1382
PpsI	GAGTC	5 cut(s)	403, 1144, 1715, 1910, 2054
Ppu21I	YACGTR	2 cut(s)	1337, 1382
PpuMI	RGGWCCY	1 cut(s)	1518
PscI	ACATGT	1 cut(s)	737
PshBI	ATTAAT	2 cut(s)	404, 677
Psp124BI	GAGCTC	2 cut(s)	728, 1826
Psp1406I	AACGTT	1 cut(s)	1185
Psp5II	RGGWCCY	1 cut(s)	1518
Psp6I	CCWGG	1 cut(s)	1479
PspCI	CACGTG	2 cut(s)	1337, 1382
PspFI	CCCAGC	1 cut(s)	195
PspGI	CCWGG	1 cut(s)	1479
PspOMI	GGGCCC	2 cut(s)	553, 596
PspPI	GGNCC	6 cut(s)	553, 554, 596, 597, 1504, 1518
PspPPI	RGGWCCY	1 cut(s)	1518
PstI	CTGCAG	1 cut(s)	1906
PsuI	RGATCY	3 cut(s)	380, 778, 1484
RsaI	GTAC	2 cut(s)	657, 2082
RsaNI	GTAC	2 cut(s)	656, 2081
RseI	CAYNNNNRTG	2 cut(s)	626, 1937
SacI	GAGCTC	2 cut(s)	728, 1826
SatI	GCNGC	6 cut(s)	1883, 1902, 1971, 1974, 1995, 2019
Sau96I	GGNCC	6 cut(s)	553, 554, 596, 597, 1504, 1518
SchI	GAGTC	5 cut(s)	404, 1144, 1715, 1910, 2055
ScrFI	CCNGG	1 cut(s)	1481
SduI	GDGCHC	7 cut(s)	204, 557, 600, 728, 1387, 1763, 1826
SfaNI	GCATC	3 cut(s)	58, 1299, 1838
SfcI	CTRYAG	3 cut(s)	361, 1864, 1902
SgrAI	CRCCGGYG	1 cut(s)	2106
SinI	GGWCC	2 cut(s)	1504, 1518
SmiMI	CAYNNNNRTG	2 cut(s)	626, 1937
SmlI	CTYRAG	1 cut(s)	2119
SmoI	CTYRAG	1 cut(s)	2119
SpeI	ACTAGT	1 cut(s)	977
SsiI	CCGC	9 cut(s)	321, 1507, 1515, 1827, 1882, 1971, 2018, 2021, 2050
SspMI	CTAG	4 cut(s)	539, 978, 1923, 1946
SstI	GAGCTC	2 cut(s)	728, 1826
StyD4I	CCNGG	1 cut(s)	1479
StyI	CCWWGG	1 cut(s)	1206
TaaI	ACNGT	5 cut(s)	687, 999, 1251, 1745, 1961
TaiI	ACGT	7 cut(s)	161, 1032, 1115, 1188, 1284, 1339, 1384
TaqI	TCGA	2 cut(s)	1181, 2068
TaqII	GACCGA	1 cut(s)	1107
TatI	WGTACW	1 cut(s)	655
TauI	GCSGC	3 cut(s)	1885, 1973, 2021
TfiI	GAWTC	3 cut(s)	1320, 1616, 1643
TscAI	CASTG	1 cut(s)	1966
TseFI	GTSAC	2 cut(s)	772, 1635
TseI	GCWGC	3 cut(s)	1901, 1973, 1994
Tsp45I	GTSAC	2 cut(s)	772, 1635
TspDTI	ATGAA	9 cut(s)	209, 263, 375, 390, 489, 1296, 1382, 1613, 1728
TspGWI	ACGGA	2 cut(s)	791, 1252
TspRI	CASTG	1 cut(s)	1966
Vha464I	CTTAAG	1 cut(s)	2119
VneI	GTGCAC	1 cut(s)	200
VpaK11BI	GGWCC	2 cut(s)	1504, 1518
VspI	ATTAAT	2 cut(s)	404, 677
XagI	CCTNNNNNAGG	1 cut(s)	1850
XapI	RAATTY	7 cut(s)	80, 122, 477, 701, 924, 1389, 1685
XceI	RCATGY	2 cut(s)	741, 1330
XmiI	GTMKAC	1 cut(s)	982
XmnI	GAANNNNTTC	1 cut(s)	1734
XspI	CTAG	4 cut(s)	539, 978, 1923, 1946
Zsp2I	ATGCAT	2 cut(s)	254, 1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.